Query 037587
Match_columns 464
No_of_seqs 266 out of 2522
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:28:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037587.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037587hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0256 1-aminocyclopropane-1- 100.0 6E-73 1.3E-77 525.7 40.3 423 1-430 38-460 (471)
2 PLN02376 1-aminocyclopropane-1 100.0 2.4E-70 5.1E-75 558.0 46.4 455 1-459 11-478 (496)
3 PLN02607 1-aminocyclopropane-1 100.0 1.5E-67 3.3E-72 531.8 44.8 429 1-434 12-440 (447)
4 PLN02450 1-aminocyclopropane-1 100.0 5.8E-65 1.2E-69 517.0 46.7 457 1-463 3-467 (468)
5 COG0436 Aspartate/tyrosine/aro 100.0 3.6E-58 7.8E-63 454.8 40.2 357 36-432 28-392 (393)
6 PRK07366 succinyldiaminopimela 100.0 1.8E-53 3.8E-58 426.2 37.5 355 35-429 29-388 (388)
7 PRK07681 aspartate aminotransf 100.0 2.6E-52 5.7E-57 418.9 39.4 350 35-427 31-384 (399)
8 PRK08636 aspartate aminotransf 100.0 1.4E-51 2.9E-56 414.1 42.1 366 34-433 31-402 (403)
9 PRK06207 aspartate aminotransf 100.0 9.5E-52 2.1E-56 414.8 39.7 360 33-433 36-404 (405)
10 PRK08068 transaminase; Reviewe 100.0 1E-51 2.2E-56 413.4 37.8 353 34-428 30-386 (389)
11 PRK06855 aminotransferase; Val 100.0 1.4E-51 3E-56 416.6 38.4 365 35-431 31-429 (433)
12 PRK09148 aminotransferase; Val 100.0 3E-51 6.5E-56 411.4 40.1 361 35-434 29-393 (405)
13 PTZ00377 alanine aminotransfer 100.0 3.6E-51 7.8E-56 419.0 41.2 346 77-432 108-476 (481)
14 PRK09147 succinyldiaminopimela 100.0 2.8E-51 6E-56 411.2 39.5 354 35-430 28-395 (396)
15 PLN02187 rooty/superroot1 100.0 3.4E-51 7.4E-56 415.4 40.5 364 35-436 65-443 (462)
16 PLN00175 aminotransferase fami 100.0 4.5E-51 9.7E-56 410.4 39.3 352 36-430 54-412 (413)
17 PRK13355 bifunctional HTH-doma 100.0 3.6E-51 7.9E-56 422.3 39.6 361 35-433 145-516 (517)
18 TIGR03540 DapC_direct LL-diami 100.0 3.8E-51 8.3E-56 408.7 38.4 350 36-427 29-382 (383)
19 PRK09276 LL-diaminopimelate am 100.0 4.3E-51 9.3E-56 408.6 37.8 351 35-427 30-384 (385)
20 PLN00143 tyrosine/nicotianamin 100.0 1.1E-50 2.5E-55 407.5 40.6 363 33-433 29-406 (409)
21 PRK06290 aspartate aminotransf 100.0 7.5E-51 1.6E-55 407.8 39.1 362 29-432 37-406 (410)
22 PTZ00433 tyrosine aminotransfe 100.0 1.2E-50 2.6E-55 408.2 39.7 365 33-433 30-410 (412)
23 PRK07682 hypothetical protein; 100.0 5.6E-51 1.2E-55 406.8 36.9 355 36-433 20-378 (378)
24 PRK06348 aspartate aminotransf 100.0 1.2E-50 2.5E-55 404.9 38.9 348 36-428 29-382 (384)
25 PLN02656 tyrosine transaminase 100.0 1.8E-50 3.9E-55 406.3 40.5 366 31-434 26-406 (409)
26 TIGR03538 DapC_gpp succinyldia 100.0 1.7E-50 3.7E-55 405.1 39.7 354 35-428 27-392 (393)
27 PLN00145 tyrosine/nicotianamin 100.0 3E-50 6.4E-55 405.9 40.3 362 35-434 51-427 (430)
28 PRK05942 aspartate aminotransf 100.0 2.4E-50 5.1E-55 404.0 37.8 350 36-428 35-389 (394)
29 COG0079 HisC Histidinol-phosph 100.0 1.8E-50 3.9E-55 393.0 35.5 330 37-431 23-354 (356)
30 PLN02231 alanine transaminase 100.0 1.2E-49 2.7E-54 408.0 41.6 378 36-432 129-528 (534)
31 PRK08361 aspartate aminotransf 100.0 4.2E-50 9.2E-55 402.0 37.4 354 36-431 33-390 (391)
32 PRK07590 L,L-diaminopimelate a 100.0 2.5E-50 5.4E-55 405.7 35.8 352 35-429 33-409 (409)
33 PRK12414 putative aminotransfe 100.0 8.2E-50 1.8E-54 398.6 38.6 349 36-427 29-383 (384)
34 PRK08960 hypothetical protein; 100.0 1.2E-49 2.6E-54 398.2 39.2 350 36-430 32-386 (387)
35 PRK07309 aromatic amino acid a 100.0 3.2E-49 6.9E-54 395.3 41.9 357 36-433 30-390 (391)
36 PRK06107 aspartate aminotransf 100.0 1.7E-49 3.7E-54 398.7 39.8 360 35-432 32-401 (402)
37 TIGR03537 DapC succinyldiamino 100.0 1.4E-49 3E-54 392.4 37.0 341 38-427 2-349 (350)
38 TIGR01264 tyr_amTase_E tyrosin 100.0 3.6E-49 7.9E-54 396.6 39.3 358 36-432 31-400 (401)
39 PRK06108 aspartate aminotransf 100.0 3.1E-49 6.6E-54 395.2 38.2 352 36-430 24-381 (382)
40 PRK05839 hypothetical protein; 100.0 4.1E-49 8.9E-54 392.0 37.5 342 37-430 25-373 (374)
41 PRK08912 hypothetical protein; 100.0 9.4E-49 2E-53 391.9 39.4 355 36-431 26-386 (387)
42 PRK15481 transcriptional regul 100.0 3.2E-49 7E-54 400.3 35.4 340 36-430 85-430 (431)
43 PRK07683 aminotransferase A; V 100.0 1.2E-48 2.7E-53 390.5 39.0 352 36-431 28-383 (387)
44 PRK05957 aspartate aminotransf 100.0 2.1E-48 4.6E-53 389.1 39.3 354 36-432 27-386 (389)
45 PRK07337 aminotransferase; Val 100.0 1.8E-48 3.9E-53 390.0 38.7 354 35-429 29-387 (388)
46 PRK09082 methionine aminotrans 100.0 8.3E-49 1.8E-53 391.8 35.7 350 36-427 30-385 (386)
47 PRK09265 aminotransferase AlaT 100.0 2.9E-48 6.2E-53 390.3 39.0 361 35-433 32-403 (404)
48 KOG0257 Kynurenine aminotransf 100.0 1.1E-49 2.3E-54 374.3 25.4 355 41-427 36-415 (420)
49 PRK07568 aspartate aminotransf 100.0 8.5E-48 1.8E-52 386.6 40.1 355 36-435 30-396 (397)
50 TIGR01265 tyr_nico_aTase tyros 100.0 8E-48 1.7E-52 386.7 39.5 360 35-432 30-402 (403)
51 PRK08175 aminotransferase; Val 100.0 1.2E-47 2.5E-52 384.7 40.6 358 35-431 28-389 (395)
52 PRK08363 alanine aminotransfer 100.0 7.8E-48 1.7E-52 386.5 38.9 355 35-432 29-395 (398)
53 PRK01533 histidinol-phosphate 100.0 1.1E-48 2.5E-53 386.8 32.2 329 36-434 29-358 (366)
54 PRK07550 hypothetical protein; 100.0 1E-47 2.2E-52 384.3 38.5 352 35-428 28-384 (386)
55 TIGR03542 DAPAT_plant LL-diami 100.0 2.4E-48 5.2E-53 390.4 33.9 349 35-428 32-401 (402)
56 PRK07324 transaminase; Validat 100.0 4E-48 8.7E-53 384.6 34.8 346 32-432 22-371 (373)
57 PRK06358 threonine-phosphate d 100.0 4.3E-48 9.3E-53 381.9 34.3 333 36-429 19-353 (354)
58 PF00155 Aminotran_1_2: Aminot 100.0 1.9E-48 4E-53 386.9 31.9 357 37-425 2-363 (363)
59 COG1167 ARO8 Transcriptional r 100.0 9.1E-48 2E-52 388.9 37.4 357 36-433 89-457 (459)
60 PRK05764 aspartate aminotransf 100.0 5.8E-47 1.3E-51 380.0 40.5 360 35-433 30-393 (393)
61 PRK07777 aminotransferase; Val 100.0 4.9E-47 1.1E-51 379.5 38.9 354 36-430 24-385 (387)
62 PRK09275 aspartate aminotransf 100.0 7.5E-48 1.6E-52 389.4 31.5 356 37-434 101-520 (527)
63 PLN02672 methionine S-methyltr 100.0 6.3E-47 1.4E-51 403.8 39.1 372 28-430 689-1079(1082)
64 COG1168 MalY Bifunctional PLP- 100.0 2E-46 4.3E-51 348.9 37.1 358 34-432 23-387 (388)
65 PRK06425 histidinol-phosphate 100.0 4.3E-47 9.4E-52 371.6 33.5 315 37-429 17-331 (332)
66 PRK07392 threonine-phosphate d 100.0 8.7E-47 1.9E-51 373.9 35.5 334 34-430 20-358 (360)
67 PRK08056 threonine-phosphate d 100.0 6.3E-47 1.4E-51 374.2 33.8 334 35-430 19-354 (356)
68 KOG0259 Tyrosine aminotransfer 100.0 2.3E-46 5.1E-51 345.4 35.1 359 37-433 62-435 (447)
69 PRK14809 histidinol-phosphate 100.0 6.7E-47 1.4E-51 374.4 33.2 327 35-430 29-356 (357)
70 PRK09257 aromatic amino acid a 100.0 6.7E-47 1.4E-51 379.4 33.4 346 36-429 26-396 (396)
71 PRK02610 histidinol-phosphate 100.0 1.8E-46 3.9E-51 373.2 35.6 342 37-433 29-373 (374)
72 PLN03026 histidinol-phosphate 100.0 1.1E-46 2.3E-51 375.1 33.9 327 35-428 51-379 (380)
73 PTZ00376 aspartate aminotransf 100.0 1.2E-46 2.6E-51 378.2 34.4 353 36-431 29-403 (404)
74 PRK05166 histidinol-phosphate 100.0 1.5E-46 3.2E-51 373.6 34.3 335 35-430 35-370 (371)
75 PRK07865 N-succinyldiaminopime 100.0 1.6E-46 3.4E-51 372.7 34.4 337 31-426 22-363 (364)
76 TIGR03539 DapC_actino succinyl 100.0 5.9E-46 1.3E-50 367.4 33.8 336 31-425 16-356 (357)
77 PRK03158 histidinol-phosphate 100.0 2.8E-46 6.1E-51 370.4 31.2 328 37-428 30-358 (359)
78 TIGR03801 asp_4_decarbox aspar 100.0 3.3E-46 7.1E-51 377.0 31.9 354 37-433 95-518 (521)
79 PLN02368 alanine transaminase 100.0 7E-46 1.5E-50 369.6 32.6 285 76-366 99-396 (407)
80 PRK01688 histidinol-phosphate 100.0 3.2E-46 6.9E-51 368.1 28.9 320 36-425 28-350 (351)
81 PRK04781 histidinol-phosphate 100.0 2.6E-45 5.7E-50 363.2 35.4 327 36-429 31-361 (364)
82 PRK06836 aspartate aminotransf 100.0 1.1E-44 2.3E-49 363.0 39.8 345 36-433 33-393 (394)
83 PRK03317 histidinol-phosphate 100.0 3.2E-45 7E-50 363.9 35.6 337 37-431 27-364 (368)
84 PRK08637 hypothetical protein; 100.0 1.3E-44 2.7E-49 361.8 38.1 329 75-432 35-387 (388)
85 PRK07908 hypothetical protein; 100.0 6.2E-45 1.3E-49 359.3 34.5 326 35-431 21-347 (349)
86 PRK09105 putative aminotransfe 100.0 3.5E-45 7.5E-50 362.7 32.5 326 36-430 43-369 (370)
87 PRK09440 avtA valine--pyruvate 100.0 8.1E-45 1.8E-49 366.9 35.7 356 36-432 30-412 (416)
88 PRK08153 histidinol-phosphate 100.0 7.6E-45 1.7E-49 360.7 34.1 334 36-433 32-367 (369)
89 PRK04870 histidinol-phosphate 100.0 7.7E-45 1.7E-49 359.7 32.6 329 35-429 25-356 (356)
90 PRK06225 aspartate aminotransf 100.0 9.6E-44 2.1E-48 354.8 36.5 348 34-434 26-379 (380)
91 PRK05387 histidinol-phosphate 100.0 4.4E-44 9.5E-49 354.1 33.4 326 36-431 24-353 (353)
92 PLN02397 aspartate transaminas 100.0 8.4E-44 1.8E-48 358.6 35.0 318 76-430 83-420 (423)
93 PRK04635 histidinol-phosphate 100.0 2.1E-44 4.5E-49 355.9 29.9 319 36-427 31-351 (354)
94 PRK06959 putative threonine-ph 100.0 2.3E-44 5.1E-49 352.6 29.6 311 35-433 23-335 (339)
95 PRK02731 histidinol-phosphate 100.0 8.1E-44 1.8E-48 354.0 33.6 334 35-430 31-365 (367)
96 PRK14808 histidinol-phosphate 100.0 2.7E-43 5.8E-48 344.7 33.0 323 28-428 11-334 (335)
97 PRK08354 putative aminotransfe 100.0 7.6E-43 1.6E-47 338.5 34.2 308 30-428 2-309 (311)
98 PRK03321 putative aminotransfe 100.0 4.4E-43 9.6E-48 346.6 30.7 338 26-430 12-350 (352)
99 PRK14807 histidinol-phosphate 100.0 2.6E-42 5.7E-47 340.5 35.9 326 37-429 23-350 (351)
100 PRK03967 histidinol-phosphate 100.0 1.5E-42 3.2E-47 340.2 32.9 328 25-433 8-336 (337)
101 PRK05664 threonine-phosphate d 100.0 1.1E-42 2.4E-47 340.0 31.5 310 35-431 19-328 (330)
102 PRK00950 histidinol-phosphate 100.0 3E-42 6.4E-47 342.1 31.6 326 35-429 33-360 (361)
103 TIGR01141 hisC histidinol-phos 100.0 3.7E-42 8E-47 339.4 31.4 327 35-426 18-346 (346)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 4.7E-41 1E-45 328.7 30.0 313 35-425 16-329 (330)
105 KOG0634 Aromatic amino acid am 100.0 6.8E-39 1.5E-43 301.1 33.7 348 76-432 92-467 (472)
106 KOG0633 Histidinol phosphate a 100.0 1.3E-37 2.9E-42 273.4 24.3 330 35-429 40-375 (375)
107 KOG0258 Alanine aminotransfera 100.0 8.6E-35 1.9E-39 269.2 29.5 344 76-430 105-468 (475)
108 cd00609 AAT_like Aspartate ami 100.0 1.4E-33 3E-38 278.3 36.6 345 39-426 1-349 (350)
109 COG3977 Alanine-alpha-ketoisov 100.0 1.4E-32 3.1E-37 246.4 29.9 358 36-432 30-412 (417)
110 PRK13238 tnaA tryptophanase/L- 100.0 1.3E-32 2.8E-37 277.8 32.1 352 35-433 35-435 (460)
111 TIGR03576 pyridox_MJ0158 pyrid 100.0 7.8E-31 1.7E-35 256.5 33.0 281 87-429 57-345 (346)
112 PRK10534 L-threonine aldolase; 100.0 1.3E-31 2.8E-36 262.8 27.3 324 38-430 1-332 (333)
113 PRK06939 2-amino-3-ketobutyrat 100.0 6.2E-29 1.3E-33 249.9 32.3 346 34-433 40-395 (397)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 2.7E-28 5.8E-33 241.9 32.7 334 34-426 14-360 (360)
115 cd00617 Tnase_like Tryptophana 100.0 1.4E-28 3.1E-33 245.0 30.0 323 78-434 47-411 (431)
116 TIGR01822 2am3keto_CoA 2-amino 100.0 3.3E-28 7.2E-33 244.2 33.0 340 34-433 36-391 (393)
117 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2E-28 4.4E-33 243.2 30.0 300 86-432 53-369 (370)
118 cd06502 TA_like Low-specificit 100.0 2.5E-28 5.5E-33 240.0 29.6 320 46-427 6-337 (338)
119 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.4E-27 3E-32 239.0 35.1 343 34-432 31-382 (385)
120 PLN02822 serine palmitoyltrans 100.0 8.3E-28 1.8E-32 244.9 33.6 355 34-432 107-478 (481)
121 PRK10874 cysteine sulfinate de 100.0 7.8E-28 1.7E-32 242.0 32.7 295 86-432 65-399 (401)
122 PLN02721 threonine aldolase 100.0 5.3E-28 1.1E-32 239.2 30.0 335 36-431 5-352 (353)
123 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-27 3.8E-32 239.2 33.5 295 86-432 62-396 (398)
124 PRK13392 5-aminolevulinate syn 100.0 7.2E-28 1.6E-32 242.7 30.5 342 37-432 47-398 (410)
125 COG1448 TyrB Aspartate/tyrosin 100.0 1.4E-27 3E-32 223.2 29.7 350 28-428 19-395 (396)
126 PLN02483 serine palmitoyltrans 100.0 1.9E-27 4E-32 242.8 32.5 310 79-433 141-468 (489)
127 PRK05958 8-amino-7-oxononanoat 100.0 6E-27 1.3E-31 234.4 33.6 340 34-429 37-385 (385)
128 PF12897 Aminotran_MocR: Alani 100.0 2.7E-27 5.9E-32 221.5 28.2 325 75-430 59-414 (425)
129 PRK02627 acetylornithine amino 100.0 2.4E-27 5.1E-32 238.3 29.2 342 29-431 32-394 (396)
130 cd00378 SHMT Serine-glycine hy 100.0 1.2E-26 2.6E-31 233.6 33.0 348 37-433 20-387 (402)
131 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 6.4E-27 1.4E-31 232.0 29.2 298 86-429 46-360 (361)
132 TIGR00707 argD acetylornithine 100.0 1.5E-26 3.2E-31 231.1 29.4 334 29-428 20-378 (379)
133 cd06451 AGAT_like Alanine-glyo 100.0 3E-26 6.5E-31 226.9 28.7 294 87-430 35-356 (356)
134 TIGR01979 sufS cysteine desulf 100.0 8.5E-26 1.8E-30 227.5 32.1 336 35-432 16-402 (403)
135 PRK02948 cysteine desulfurase; 100.0 9.5E-27 2.1E-31 232.6 25.0 299 86-432 45-375 (381)
136 cd06454 KBL_like KBL_like; thi 100.0 2.3E-25 4.9E-30 220.0 32.6 294 87-428 49-348 (349)
137 PLN02855 Bifunctional selenocy 100.0 1.5E-25 3.3E-30 226.8 31.0 339 36-434 31-421 (424)
138 PRK07049 methionine gamma-lyas 99.9 3.5E-25 7.6E-30 222.4 31.9 225 77-348 77-311 (427)
139 PRK09064 5-aminolevulinate syn 99.9 2.4E-25 5.3E-30 224.3 30.7 344 36-433 46-399 (407)
140 PRK03244 argD acetylornithine 99.9 1.2E-25 2.6E-30 225.9 28.3 338 29-433 36-396 (398)
141 PRK09295 bifunctional cysteine 99.9 3.1E-25 6.8E-30 223.4 31.3 292 86-430 69-403 (406)
142 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 3.3E-25 7.1E-30 219.4 30.5 294 86-428 33-354 (355)
143 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.4E-25 1.2E-29 221.2 29.8 329 38-425 18-397 (397)
144 PRK07179 hypothetical protein; 99.9 2.4E-24 5.3E-29 216.9 33.4 294 86-433 101-400 (407)
145 TIGR01821 5aminolev_synth 5-am 99.9 1.5E-24 3.2E-29 218.1 31.4 299 86-433 92-398 (402)
146 PRK01278 argD acetylornithine 99.9 1.4E-24 3E-29 217.4 30.8 342 28-431 23-388 (389)
147 TIGR02326 transamin_PhnW 2-ami 99.9 2.6E-24 5.6E-29 213.6 30.6 295 87-429 38-360 (363)
148 cd06453 SufS_like Cysteine des 99.9 1.1E-24 2.3E-29 217.3 27.1 288 86-425 45-373 (373)
149 PRK13479 2-aminoethylphosphona 99.9 7.4E-24 1.6E-28 210.7 32.3 299 86-433 39-365 (368)
150 PRK08247 cystathionine gamma-s 99.9 1.3E-24 2.8E-29 215.1 25.7 295 77-431 46-364 (366)
151 TIGR03403 nifS_epsilon cystein 99.9 2.7E-24 5.9E-29 214.9 28.2 306 79-434 35-378 (382)
152 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6E-24 1.3E-28 212.4 29.8 304 85-433 64-383 (387)
153 cd00610 OAT_like Acetyl ornith 99.9 5.7E-24 1.2E-28 215.0 29.7 350 29-429 29-413 (413)
154 PLN02409 serine--glyoxylate am 99.9 1.4E-23 3.1E-28 210.4 31.3 309 85-434 39-375 (401)
155 PLN02242 methionine gamma-lyas 99.9 7.1E-24 1.5E-28 212.1 28.0 217 86-354 78-303 (418)
156 PRK00011 glyA serine hydroxyme 99.9 2.9E-23 6.4E-28 209.8 32.6 286 107-431 86-389 (416)
157 cd00613 GDC-P Glycine cleavage 99.9 1E-23 2.2E-28 212.0 28.6 327 36-425 20-398 (398)
158 cd06450 DOPA_deC_like DOPA dec 99.9 3.9E-24 8.5E-29 210.9 24.9 298 79-427 29-344 (345)
159 PRK13520 L-tyrosine decarboxyl 99.9 1.5E-22 3.1E-27 201.7 33.7 297 87-430 58-370 (371)
160 TIGR03402 FeS_nifS cysteine de 99.9 2.4E-23 5.3E-28 207.9 27.3 293 87-433 45-374 (379)
161 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.5E-22 3.2E-27 201.8 32.9 291 87-427 62-372 (373)
162 PRK05093 argD bifunctional N-s 99.9 7.3E-23 1.6E-27 205.7 30.6 337 28-432 32-401 (403)
163 PRK13393 5-aminolevulinate syn 99.9 1.8E-22 4E-27 203.1 33.5 299 86-433 92-398 (406)
164 TIGR01977 am_tr_V_EF2568 cyste 99.9 4.3E-23 9.3E-28 205.9 27.6 295 84-427 44-375 (376)
165 PRK02936 argD acetylornithine 99.9 1.7E-22 3.8E-27 201.5 31.8 337 28-429 21-377 (377)
166 TIGR00713 hemL glutamate-1-sem 99.9 1.1E-22 2.3E-27 205.9 28.7 349 28-431 40-422 (423)
167 PRK00451 glycine dehydrogenase 99.9 4.3E-23 9.3E-28 210.4 25.9 292 87-429 108-446 (447)
168 PRK04073 rocD ornithine--oxo-a 99.9 1.6E-22 3.6E-27 202.7 28.9 331 28-429 32-395 (396)
169 PRK06234 methionine gamma-lyas 99.9 4E-22 8.7E-27 199.3 30.6 216 77-348 58-284 (400)
170 PLN03227 serine palmitoyltrans 99.9 1.1E-21 2.3E-26 195.8 31.8 314 80-432 39-383 (392)
171 TIGR02080 O_succ_thio_ly O-suc 99.9 5E-22 1.1E-26 197.0 27.4 218 77-348 45-268 (382)
172 PRK08088 4-aminobutyrate amino 99.9 2.6E-21 5.5E-26 195.5 32.1 359 29-432 34-424 (425)
173 PRK07505 hypothetical protein; 99.9 1E-20 2.2E-25 190.2 36.1 339 32-431 42-399 (402)
174 PRK06767 methionine gamma-lyas 99.9 1.7E-21 3.7E-26 194.1 29.5 290 77-430 55-384 (386)
175 PRK04260 acetylornithine amino 99.9 2.2E-21 4.8E-26 193.3 30.4 333 28-428 21-374 (375)
176 TIGR01437 selA_rel uncharacter 99.9 1.3E-21 2.8E-26 193.3 28.4 287 85-429 42-363 (363)
177 PRK06460 hypothetical protein; 99.9 9.3E-22 2E-26 195.0 26.9 211 85-348 46-261 (376)
178 PLN02994 1-aminocyclopropane-1 99.9 6.8E-24 1.5E-28 180.8 9.9 145 1-145 8-153 (153)
179 PRK08045 cystathionine gamma-s 99.9 3.3E-21 7.1E-26 191.3 29.6 218 77-348 46-269 (386)
180 COG0156 BioF 7-keto-8-aminopel 99.9 6.3E-21 1.4E-25 185.4 29.1 299 83-428 83-387 (388)
181 PRK12381 bifunctional succinyl 99.9 8.2E-21 1.8E-25 190.8 30.2 345 28-433 31-401 (406)
182 PRK07582 cystathionine gamma-l 99.9 8.9E-21 1.9E-25 187.5 29.4 280 77-430 45-364 (366)
183 PRK08776 cystathionine gamma-s 99.9 1E-20 2.2E-25 188.9 29.1 216 78-348 55-277 (405)
184 PRK08133 O-succinylhomoserine 99.9 9.3E-21 2E-25 188.8 28.7 209 86-348 63-277 (390)
185 PRK07504 O-succinylhomoserine 99.9 5.5E-21 1.2E-25 190.8 27.1 217 77-348 59-282 (398)
186 TIGR02006 IscS cysteine desulf 99.9 5.7E-21 1.2E-25 192.1 27.1 295 86-434 49-380 (402)
187 PRK14012 cysteine desulfurase; 99.9 4.9E-21 1.1E-25 192.7 26.1 293 86-434 51-382 (404)
188 PRK08861 cystathionine gamma-s 99.9 1.8E-20 3.9E-25 185.5 29.4 217 77-348 47-270 (388)
189 COG0520 csdA Selenocysteine ly 99.9 1.7E-20 3.7E-25 185.9 29.3 293 86-430 68-404 (405)
190 cd00614 CGS_like CGS_like: Cys 99.9 1.8E-20 3.9E-25 185.9 28.9 211 85-349 41-258 (369)
191 PRK07811 cystathionine gamma-s 99.9 2.3E-20 5.1E-25 185.8 29.5 211 84-348 61-278 (388)
192 PRK07050 cystathionine beta-ly 99.9 1.8E-20 3.9E-25 186.7 28.3 217 77-348 59-282 (394)
193 PTZ00125 ornithine aminotransf 99.9 3E-20 6.5E-25 186.9 29.9 344 29-434 24-398 (400)
194 PRK07503 methionine gamma-lyas 99.9 3.5E-20 7.5E-25 185.4 29.5 215 78-348 60-283 (403)
195 PRK08249 cystathionine gamma-s 99.9 2.1E-20 4.5E-25 186.3 27.6 208 86-348 66-280 (398)
196 PRK00854 rocD ornithine--oxo-a 99.9 4.1E-20 8.8E-25 186.0 30.0 333 28-430 33-400 (401)
197 PLN00144 acetylornithine trans 99.9 3.4E-20 7.3E-25 184.4 27.7 334 29-432 8-381 (382)
198 TIGR01325 O_suc_HS_sulf O-succ 99.9 5E-20 1.1E-24 183.2 28.3 215 78-348 49-270 (380)
199 TIGR01328 met_gam_lyase methio 99.9 3.5E-20 7.7E-25 184.6 27.0 216 77-348 53-277 (391)
200 TIGR03235 DNA_S_dndA cysteine 99.9 3.2E-21 6.8E-26 190.8 19.1 281 86-420 44-347 (353)
201 PRK07810 O-succinylhomoserine 99.9 3.7E-20 8E-25 184.9 26.7 217 77-348 64-287 (403)
202 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.7E-20 1E-24 182.7 25.9 172 87-300 30-207 (376)
203 PRK08360 4-aminobutyrate amino 99.9 7.2E-19 1.6E-23 177.6 34.6 376 28-448 33-443 (443)
204 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.5E-19 5.4E-24 180.7 30.7 358 28-430 25-419 (420)
205 COG1104 NifS Cysteine sulfinat 99.9 6.6E-20 1.4E-24 175.3 23.8 302 86-438 46-384 (386)
206 PRK07269 cystathionine gamma-s 99.9 8.5E-20 1.8E-24 179.8 24.8 289 77-430 48-363 (364)
207 PRK08064 cystathionine beta-ly 99.9 2.6E-19 5.6E-24 178.4 28.1 210 86-348 56-270 (390)
208 PRK05968 hypothetical protein; 99.9 4.7E-19 1E-23 176.5 29.8 280 86-431 65-386 (389)
209 PLN02955 8-amino-7-oxononanoat 99.9 4.8E-19 1E-23 176.3 29.5 291 86-433 149-463 (476)
210 PRK05937 8-amino-7-oxononanoat 99.9 6E-19 1.3E-23 175.3 29.2 290 86-433 58-352 (370)
211 KOG1412 Aspartate aminotransfe 99.9 4.6E-19 1E-23 160.5 25.5 356 28-433 23-407 (410)
212 PRK04366 glycine dehydrogenase 99.9 6.4E-19 1.4E-23 180.1 30.1 316 76-433 98-450 (481)
213 PRK09028 cystathionine beta-ly 99.9 7.5E-19 1.6E-23 173.8 29.4 215 79-348 54-277 (394)
214 PRK08574 cystathionine gamma-s 99.9 6.9E-19 1.5E-23 174.8 29.3 216 78-348 48-269 (385)
215 TIGR03246 arg_catab_astC succi 99.9 1.9E-18 4E-23 173.2 32.3 336 28-431 27-395 (397)
216 PRK06918 4-aminobutyrate amino 99.9 2.8E-18 6E-23 174.5 33.7 360 27-432 45-444 (451)
217 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 4.2E-19 9.1E-24 178.6 26.9 165 77-289 51-219 (418)
218 KOG1411 Aspartate aminotransfe 99.8 1.4E-19 3.1E-24 166.0 20.6 351 29-430 46-424 (427)
219 PLN02651 cysteine desulfurase 99.8 9.5E-20 2.1E-24 180.8 20.8 279 87-419 46-364 (364)
220 cd00615 Orn_deC_like Ornithine 99.8 3.5E-20 7.5E-25 178.2 16.8 167 85-286 60-231 (294)
221 PRK04612 argD acetylornithine 99.8 2.4E-18 5.2E-23 172.1 30.1 343 29-432 33-404 (408)
222 PRK09792 4-aminobutyrate trans 99.8 6.9E-18 1.5E-22 169.9 33.4 355 29-430 33-420 (421)
223 TIGR01324 cysta_beta_ly_B cyst 99.8 3.4E-18 7.5E-23 169.1 29.8 208 87-348 53-266 (377)
224 PRK08248 O-acetylhomoserine am 99.8 2.6E-18 5.5E-23 172.7 29.2 156 86-288 66-225 (431)
225 PLN02624 ornithine-delta-amino 99.8 7.2E-18 1.6E-22 172.0 32.0 347 29-435 68-448 (474)
226 PRK07671 cystathionine beta-ly 99.8 2.9E-18 6.3E-23 170.0 27.7 208 86-348 52-266 (377)
227 TIGR01329 cysta_beta_ly_E cyst 99.8 4.5E-18 9.8E-23 168.8 28.8 288 79-431 40-375 (378)
228 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 3.5E-18 7.6E-23 170.0 27.9 172 86-298 29-204 (375)
229 TIGR01885 Orn_aminotrans ornit 99.8 8.8E-18 1.9E-22 168.9 31.0 337 29-429 30-400 (401)
230 PRK05939 hypothetical protein; 99.8 1E-17 2.2E-22 166.9 30.4 154 88-288 51-207 (397)
231 PRK07495 4-aminobutyrate amino 99.8 2.9E-17 6.3E-22 165.3 33.8 359 27-433 31-423 (425)
232 PRK06777 4-aminobutyrate amino 99.8 3.1E-17 6.8E-22 165.2 33.9 357 27-430 31-420 (421)
233 cd00616 AHBA_syn 3-amino-5-hyd 99.8 4E-18 8.6E-23 168.6 26.4 287 84-426 18-352 (352)
234 PRK06084 O-acetylhomoserine am 99.8 7.6E-18 1.6E-22 169.2 28.5 157 86-288 60-219 (425)
235 PRK06702 O-acetylhomoserine am 99.8 5.1E-18 1.1E-22 169.3 26.9 210 86-348 63-310 (432)
236 PLN02509 cystathionine beta-ly 99.8 1.1E-17 2.4E-22 168.4 29.5 218 78-348 125-349 (464)
237 PRK00062 glutamate-1-semialdeh 99.8 1E-17 2.2E-22 169.1 29.5 347 28-432 42-425 (426)
238 PRK05967 cystathionine beta-ly 99.8 1.9E-17 4E-22 163.6 30.4 212 86-348 62-280 (395)
239 PF00266 Aminotran_5: Aminotra 99.8 9.2E-18 2E-22 167.1 28.0 283 87-421 46-371 (371)
240 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.5E-18 1.2E-22 168.7 25.8 171 85-299 34-206 (379)
241 PF04864 Alliinase_C: Allinase 99.8 1.8E-18 4E-23 160.5 18.5 288 86-428 45-362 (363)
242 PRK06176 cystathionine gamma-s 99.8 2.2E-17 4.9E-22 163.7 27.6 208 86-348 52-266 (380)
243 TIGR02618 tyr_phenol_ly tyrosi 99.8 4.8E-17 1E-21 159.9 28.9 325 79-434 66-429 (450)
244 TIGR01814 kynureninase kynuren 99.8 5.3E-17 1.1E-21 163.5 29.6 275 107-429 84-405 (406)
245 PRK13034 serine hydroxymethylt 99.8 1.7E-16 3.6E-21 159.7 32.8 282 113-433 94-394 (416)
246 TIGR03588 PseC UDP-4-keto-6-de 99.8 3.9E-17 8.5E-22 163.0 27.8 295 84-429 29-380 (380)
247 KOG1549 Cysteine desulfurase N 99.8 5.2E-17 1.1E-21 156.0 26.4 208 33-289 39-257 (428)
248 TIGR03531 selenium_SpcS O-phos 99.8 7.7E-17 1.7E-21 160.6 28.5 308 87-428 104-443 (444)
249 PRK08117 4-aminobutyrate amino 99.8 2.2E-16 4.8E-21 160.0 32.2 358 29-432 36-430 (433)
250 PRK13580 serine hydroxymethylt 99.8 2.8E-16 6.1E-21 156.7 31.6 351 37-433 50-447 (493)
251 COG0075 Serine-pyruvate aminot 99.8 2.9E-16 6.3E-21 151.6 29.9 304 87-435 37-367 (383)
252 TIGR02407 ectoine_ectB diamino 99.8 3.4E-16 7.4E-21 157.2 31.4 357 27-431 26-412 (412)
253 COG2008 GLY1 Threonine aldolas 99.8 1.2E-16 2.6E-21 149.7 25.7 331 39-429 2-341 (342)
254 PRK13237 tyrosine phenol-lyase 99.8 6.4E-16 1.4E-20 152.4 30.5 326 79-434 73-436 (460)
255 COG4992 ArgD Ornithine/acetylo 99.8 2.9E-16 6.3E-21 150.1 27.1 338 29-433 35-400 (404)
256 PRK06058 4-aminobutyrate amino 99.8 2.3E-15 5E-20 152.6 34.9 356 29-431 49-442 (443)
257 PTZ00094 serine hydroxymethylt 99.8 1.2E-15 2.5E-20 155.5 32.2 289 107-433 95-410 (452)
258 COG0160 GabT 4-aminobutyrate a 99.8 2.6E-15 5.6E-20 147.9 31.9 360 28-432 48-446 (447)
259 PRK05994 O-acetylhomoserine am 99.8 1.4E-15 3.1E-20 153.1 29.7 155 86-287 65-223 (427)
260 PRK05964 adenosylmethionine--8 99.7 2.8E-15 6.1E-20 151.5 31.6 349 28-431 34-422 (423)
261 PRK03715 argD acetylornithine 99.7 2E-15 4.3E-20 150.7 28.8 340 29-432 29-394 (395)
262 cd01494 AAT_I Aspartate aminot 99.7 6.1E-17 1.3E-21 142.3 15.3 166 87-287 3-169 (170)
263 PRK09264 diaminobutyrate--2-ox 99.7 7.4E-15 1.6E-19 148.3 32.3 357 28-432 31-417 (425)
264 COG1103 Archaea-specific pyrid 99.7 1.2E-15 2.7E-20 135.9 23.2 304 86-433 63-382 (382)
265 PRK15407 lipopolysaccharide bi 99.7 5E-15 1.1E-19 149.4 30.0 170 86-300 65-246 (438)
266 TIGR00709 dat 2,4-diaminobutyr 99.7 1.9E-14 4E-19 145.9 33.8 359 28-431 31-435 (442)
267 PRK07812 O-acetylhomoserine am 99.7 5.3E-15 1.1E-19 148.6 28.2 156 86-287 71-230 (436)
268 PRK08593 4-aminobutyrate amino 99.7 6E-14 1.3E-18 142.1 35.9 359 29-435 35-433 (445)
269 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 8.7E-15 1.9E-19 144.3 28.8 276 87-430 58-386 (386)
270 KOG1359 Glycine C-acetyltransf 99.7 1.7E-15 3.7E-20 136.5 21.5 335 35-433 66-414 (417)
271 PRK08134 O-acetylhomoserine am 99.7 4.8E-15 1E-19 149.1 26.3 155 86-287 66-224 (433)
272 PRK02769 histidine decarboxyla 99.7 9.2E-15 2E-19 144.5 26.9 294 87-433 64-374 (380)
273 PRK06541 hypothetical protein; 99.7 5.4E-14 1.2E-18 142.8 33.0 355 29-432 45-456 (460)
274 PRK05769 4-aminobutyrate amino 99.7 6.9E-14 1.5E-18 141.5 33.2 356 29-431 47-439 (441)
275 PLN02724 Molybdenum cofactor s 99.7 7.9E-15 1.7E-19 158.7 27.4 309 86-432 80-489 (805)
276 KOG1360 5-aminolevulinate synt 99.7 5.2E-15 1.1E-19 138.6 22.2 299 86-434 218-527 (570)
277 KOG1368 Threonine aldolase [Am 99.7 1.2E-14 2.6E-19 131.5 23.5 334 38-432 23-370 (384)
278 TIGR03372 putres_am_tran putre 99.7 6.8E-14 1.5E-18 140.8 31.6 342 29-429 68-442 (442)
279 COG0001 HemL Glutamate-1-semia 99.7 5.9E-14 1.3E-18 135.8 29.4 345 29-433 46-430 (432)
280 COG0112 GlyA Glycine/serine hy 99.7 6.1E-14 1.3E-18 132.4 28.4 313 80-433 64-392 (413)
281 PRK11522 putrescine--2-oxoglut 99.7 8.2E-14 1.8E-18 141.2 31.6 351 29-433 75-453 (459)
282 PLN02880 tyrosine decarboxylas 99.7 3.6E-14 7.7E-19 144.9 28.9 323 83-432 117-485 (490)
283 TIGR01364 serC_1 phosphoserine 99.7 1.1E-14 2.4E-19 142.8 24.1 287 88-432 37-349 (349)
284 PLN02414 glycine dehydrogenase 99.7 2E-14 4.4E-19 154.9 27.9 318 75-433 552-909 (993)
285 PLN02590 probable tyrosine dec 99.7 9.7E-14 2.1E-18 141.8 31.3 327 80-433 162-534 (539)
286 PLN03226 serine hydroxymethylt 99.7 1.2E-13 2.6E-18 140.3 30.9 286 108-432 96-420 (475)
287 COG0399 WecE Predicted pyridox 99.7 5.8E-14 1.2E-18 135.9 26.9 171 86-301 36-210 (374)
288 PRK08114 cystathionine beta-ly 99.7 1E-13 2.2E-18 136.9 28.9 207 87-348 65-280 (395)
289 PRK05639 4-aminobutyrate amino 99.7 3.6E-13 7.8E-18 136.6 33.6 359 29-432 46-444 (457)
290 PRK07678 aminotransferase; Val 99.7 6.3E-13 1.4E-17 134.9 34.6 362 29-433 40-451 (451)
291 COG0626 MetC Cystathionine bet 99.7 2.1E-13 4.6E-18 132.8 29.2 210 86-348 65-282 (396)
292 cd00611 PSAT_like Phosphoserin 99.6 2E-14 4.4E-19 141.9 21.8 282 86-429 46-354 (355)
293 PLN02271 serine hydroxymethylt 99.6 2.3E-13 4.9E-18 136.6 28.7 295 88-430 194-539 (586)
294 PRK05613 O-acetylhomoserine am 99.6 1.8E-13 3.9E-18 137.6 28.2 155 87-287 72-230 (437)
295 PF01041 DegT_DnrJ_EryC1: DegT 99.6 1.1E-13 2.4E-18 137.2 25.9 284 86-426 27-363 (363)
296 PRK07482 hypothetical protein; 99.6 1.4E-12 3E-17 132.7 34.1 357 29-432 43-455 (461)
297 TIGR01788 Glu-decarb-GAD gluta 99.6 1.5E-13 3.3E-18 137.8 26.4 311 87-432 79-430 (431)
298 PLN02482 glutamate-1-semialdeh 99.6 9E-13 1.9E-17 133.8 31.7 339 29-431 92-473 (474)
299 PF00464 SHMT: Serine hydroxym 99.6 1.2E-13 2.6E-18 135.1 23.7 293 87-423 65-397 (399)
300 PRK15029 arginine decarboxylas 99.6 7.2E-14 1.6E-18 146.8 23.6 177 86-286 207-397 (755)
301 PRK06943 adenosylmethionine--8 99.6 3.4E-12 7.3E-17 129.5 34.8 348 29-432 47-447 (453)
302 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 3.5E-15 7.7E-20 146.3 12.1 177 86-289 68-255 (417)
303 PLN03032 serine decarboxylase; 99.6 4E-13 8.7E-18 131.9 26.2 286 86-427 64-372 (374)
304 PRK00615 glutamate-1-semialdeh 99.6 1.7E-12 3.6E-17 130.8 31.3 348 29-432 46-429 (433)
305 PRK06434 cystathionine gamma-l 99.6 7.4E-13 1.6E-17 130.9 28.2 205 87-348 67-278 (384)
306 PRK05965 hypothetical protein; 99.6 3.9E-12 8.5E-17 129.3 33.8 355 29-434 39-450 (459)
307 KOG2862 Alanine-glyoxylate ami 99.6 1.1E-12 2.3E-17 119.7 26.2 285 108-433 67-384 (385)
308 PLN02760 4-aminobutyrate:pyruv 99.6 2.2E-12 4.7E-17 132.1 31.9 353 29-433 82-493 (504)
309 PRK13360 omega amino acid--pyr 99.6 4.9E-12 1.1E-16 128.0 34.2 352 29-431 39-440 (442)
310 PRK05355 3-phosphoserine/phosp 99.6 1.2E-13 2.7E-18 136.1 22.0 269 110-432 67-359 (360)
311 PRK07046 aminotransferase; Val 99.6 2.3E-12 4.9E-17 130.6 31.7 335 29-432 68-451 (453)
312 PRK12389 glutamate-1-semialdeh 99.6 3.2E-12 6.9E-17 129.2 32.6 348 28-431 45-427 (428)
313 PRK03080 phosphoserine aminotr 99.6 2.3E-13 4.9E-18 135.6 23.5 286 86-433 50-375 (378)
314 PRK06917 hypothetical protein; 99.6 1E-11 2.2E-16 126.0 35.5 363 26-432 21-438 (447)
315 PRK06148 hypothetical protein; 99.6 2.1E-12 4.5E-17 142.6 32.9 359 29-432 617-1011(1013)
316 PRK06062 hypothetical protein; 99.6 3.8E-12 8.2E-17 129.2 31.7 355 29-433 46-447 (451)
317 PRK07481 hypothetical protein; 99.6 1.1E-11 2.4E-16 125.8 35.0 360 28-433 34-447 (449)
318 PRK04013 argD acetylornithine/ 99.6 1.3E-12 2.9E-17 128.5 27.4 324 29-431 17-360 (364)
319 PRK07483 hypothetical protein; 99.6 7.8E-12 1.7E-16 126.6 33.6 360 28-432 22-438 (443)
320 PRK09221 beta alanine--pyruvat 99.6 9.3E-12 2E-16 126.1 33.8 353 28-431 41-443 (445)
321 PRK06105 aminotransferase; Pro 99.6 9.2E-12 2E-16 126.7 33.6 353 29-432 41-450 (460)
322 PRK06938 diaminobutyrate--2-ox 99.6 1.3E-11 2.8E-16 125.6 34.6 359 29-431 56-460 (464)
323 PRK06149 hypothetical protein; 99.6 5.6E-12 1.2E-16 139.2 34.5 356 29-431 578-970 (972)
324 PRK06082 4-aminobutyrate amino 99.6 1.1E-11 2.3E-16 126.1 33.9 349 32-432 68-452 (459)
325 PRK08742 adenosylmethionine--8 99.6 1.2E-11 2.5E-16 125.9 33.6 356 29-432 57-468 (472)
326 PRK07986 adenosylmethionine--8 99.6 5.4E-12 1.2E-16 126.9 30.7 346 29-432 36-424 (428)
327 PRK06173 adenosylmethionine--8 99.6 8.5E-12 1.8E-16 125.7 31.3 346 28-431 36-425 (429)
328 PRK06916 adenosylmethionine--8 99.6 1.9E-11 4.1E-16 124.4 33.9 351 29-433 49-457 (460)
329 PRK12403 putative aminotransfe 99.6 2.8E-11 6E-16 123.2 35.0 355 29-432 47-453 (460)
330 PRK07030 adenosylmethionine--8 99.6 2.5E-11 5.3E-16 123.6 34.5 353 28-432 39-447 (466)
331 TIGR02617 tnaA_trp_ase tryptop 99.6 6.3E-12 1.4E-16 122.8 28.6 354 35-434 40-444 (467)
332 PRK05630 adenosylmethionine--8 99.6 1.1E-11 2.4E-16 124.7 31.4 343 29-433 33-422 (422)
333 PRK15400 lysine decarboxylase 99.6 9.7E-13 2.1E-17 136.9 24.3 169 86-285 197-377 (714)
334 PRK13578 ornithine decarboxyla 99.6 8.5E-13 1.8E-17 137.5 23.8 174 86-286 176-366 (720)
335 KOG0053 Cystathionine beta-lya 99.5 4.3E-12 9.2E-17 122.2 26.3 166 87-298 80-249 (409)
336 PRK07480 putative aminotransfe 99.5 1.1E-11 2.4E-16 125.9 30.2 355 29-432 43-449 (456)
337 PRK07036 hypothetical protein; 99.5 2E-11 4.3E-16 124.3 32.0 356 29-432 44-453 (466)
338 PRK06931 diaminobutyrate--2-ox 99.5 5.6E-11 1.2E-15 120.8 33.8 358 29-431 51-454 (459)
339 PRK15399 lysine decarboxylase 99.5 6.7E-12 1.5E-16 130.7 26.9 171 86-286 197-378 (713)
340 TIGR00508 bioA adenosylmethion 99.5 1.1E-11 2.4E-16 125.0 28.0 281 109-431 105-426 (427)
341 PLN02263 serine decarboxylase 99.5 1.5E-11 3.3E-16 122.7 28.1 292 85-432 130-444 (470)
342 PF01212 Beta_elim_lyase: Beta 99.5 8.1E-14 1.8E-18 132.3 11.2 189 79-295 24-215 (290)
343 TIGR03799 NOD_PanD_pyr putativ 99.5 1.4E-11 3E-16 126.3 28.3 318 80-424 121-518 (522)
344 PRK06209 glutamate-1-semialdeh 99.5 3E-11 6.4E-16 122.2 30.4 339 27-433 39-407 (431)
345 COG2873 MET17 O-acetylhomoseri 99.5 3.7E-12 7.9E-17 119.3 21.6 296 86-431 64-425 (426)
346 TIGR01366 serC_3 phosphoserine 99.5 4E-12 8.7E-17 125.6 22.6 282 86-431 43-360 (361)
347 PRK04311 selenocysteine syntha 99.5 9.7E-12 2.1E-16 125.6 25.0 297 87-430 130-463 (464)
348 PRK12566 glycine dehydrogenase 99.4 7.6E-11 1.7E-15 125.3 28.1 318 75-433 527-878 (954)
349 PRK08297 L-lysine aminotransfe 99.4 5E-10 1.1E-14 113.5 32.8 347 27-432 35-442 (443)
350 PRK05367 glycine dehydrogenase 99.4 1.5E-10 3.2E-15 125.9 30.6 309 84-433 538-877 (954)
351 KOG1357 Serine palmitoyltransf 99.4 8.2E-12 1.8E-16 119.4 17.9 298 86-428 184-499 (519)
352 TIGR00461 gcvP glycine dehydro 99.4 2.7E-10 5.8E-15 122.0 28.8 305 84-433 526-869 (939)
353 TIGR00699 GABAtrns_euk 4-amino 99.4 2.1E-10 4.6E-15 115.9 26.6 348 29-429 51-464 (464)
354 COG0076 GadB Glutamate decarbo 99.4 8.8E-11 1.9E-15 118.3 23.3 250 85-367 98-381 (460)
355 COG1982 LdcC Arginine/lysine/o 99.4 6.9E-11 1.5E-15 118.5 22.2 167 86-286 72-243 (557)
356 TIGR00474 selA seryl-tRNA(sec) 99.4 6.7E-10 1.5E-14 112.0 27.9 290 87-425 125-453 (454)
357 TIGR01365 serC_2 phosphoserine 99.4 4.3E-10 9.4E-15 110.6 25.8 293 87-429 38-371 (374)
358 COG0161 BioA Adenosylmethionin 99.4 1.2E-09 2.6E-14 107.5 28.1 351 29-432 37-444 (449)
359 PLN02974 adenosylmethionine-8- 99.3 3E-09 6.4E-14 114.0 33.2 214 188-429 583-816 (817)
360 TIGR03251 LAT_fam L-lysine 6-t 99.3 3.3E-09 7.1E-14 107.4 31.7 280 109-427 103-430 (431)
361 PF00282 Pyridoxal_deC: Pyrido 99.3 3.7E-10 8E-15 111.7 23.7 259 84-364 75-371 (373)
362 KOG1404 Alanine-glyoxylate ami 99.3 4.8E-09 1E-13 99.1 28.2 311 78-425 87-432 (442)
363 PLN02452 phosphoserine transam 99.3 4.1E-09 9E-14 103.7 28.3 289 87-432 51-364 (365)
364 PLN02414 glycine dehydrogenase 99.2 3E-09 6.5E-14 115.4 25.7 275 87-427 151-465 (993)
365 COG3033 TnaA Tryptophanase [Am 99.2 6.9E-09 1.5E-13 96.9 24.3 330 78-434 73-447 (471)
366 PRK05367 glycine dehydrogenase 99.2 2.9E-09 6.4E-14 115.9 24.8 270 88-426 125-437 (954)
367 PRK12462 phosphoserine aminotr 99.2 1.8E-08 4E-13 98.2 25.4 332 39-432 6-363 (364)
368 KOG1402 Ornithine aminotransfe 99.1 6.4E-08 1.4E-12 89.5 25.6 291 87-430 100-426 (427)
369 KOG1401 Acetylornithine aminot 99.1 8.9E-08 1.9E-12 91.4 27.1 288 108-432 115-431 (433)
370 PF00202 Aminotran_3: Aminotra 99.1 8E-09 1.7E-13 101.2 21.0 252 29-318 9-291 (339)
371 KOG1358 Serine palmitoyltransf 99.1 9E-09 2E-13 97.2 17.6 311 80-431 135-465 (467)
372 TIGR03811 tyr_de_CO2_Ent tyros 99.1 6.2E-07 1.3E-11 93.2 32.3 201 80-296 115-405 (608)
373 PF06838 Met_gamma_lyase: Meth 99.0 2.1E-07 4.7E-12 88.0 24.3 237 87-366 53-318 (403)
374 KOG1403 Predicted alanine-glyo 99.0 1.8E-07 3.9E-12 85.5 21.0 355 28-431 39-437 (452)
375 COG1003 GcvP Glycine cleavage 98.9 6E-07 1.3E-11 86.4 22.9 317 74-434 92-450 (496)
376 KOG2467 Glycine/serine hydroxy 98.8 3.9E-06 8.4E-11 79.0 25.0 302 85-430 79-425 (477)
377 COG3844 Kynureninase [Amino ac 98.8 6.5E-06 1.4E-10 76.5 25.4 292 87-433 75-404 (407)
378 TIGR00461 gcvP glycine dehydro 98.7 5.1E-06 1.1E-10 89.7 26.0 259 107-426 124-426 (939)
379 PF05889 SLA_LP_auto_ag: Solub 98.6 6.5E-06 1.4E-10 79.6 21.1 298 110-430 75-389 (389)
380 PF02347 GDC-P: Glycine cleava 98.5 2.1E-05 4.5E-10 78.0 22.3 261 107-425 125-429 (429)
381 COG1921 SelA Selenocysteine sy 98.5 3.8E-05 8.2E-10 74.4 22.7 177 108-318 82-267 (395)
382 COG4100 Cystathionine beta-lya 98.4 2.8E-05 6.1E-10 71.4 17.4 179 85-301 66-262 (416)
383 KOG0628 Aromatic-L-amino-acid/ 98.4 0.00035 7.6E-09 68.2 25.1 313 86-433 111-473 (511)
384 KOG0629 Glutamate decarboxylas 98.3 0.00013 2.9E-09 70.3 21.1 293 109-429 160-507 (510)
385 COG0403 GcvP Glycine cleavage 98.3 0.00089 1.9E-08 65.0 25.4 270 107-428 135-447 (450)
386 KOG1383 Glutamate decarboxylas 98.2 0.00014 3.1E-09 70.9 19.4 304 85-434 117-449 (491)
387 COG1932 SerC Phosphoserine ami 98.1 0.0007 1.5E-08 64.6 20.8 332 37-432 5-364 (365)
388 PF03841 SelA: L-seryl-tRNA se 98.1 4.8E-06 1E-10 79.9 5.7 212 109-348 62-296 (367)
389 KOG1405 4-aminobutyrate aminot 98.1 0.00059 1.3E-08 64.4 18.7 216 173-431 255-483 (484)
390 PRK12566 glycine dehydrogenase 97.7 0.0061 1.3E-07 66.2 21.4 260 107-426 139-439 (954)
391 KOG3843 Predicted serine hydro 97.5 0.0043 9.4E-08 56.3 14.1 256 155-433 124-404 (432)
392 PLN02672 methionine S-methyltr 97.1 0.021 4.6E-07 63.4 17.5 193 77-297 419-624 (1082)
393 KOG2040 Glycine dehydrogenase 96.9 0.26 5.7E-06 50.7 21.2 311 75-429 566-916 (1001)
394 KOG2790 Phosphoserine aminotra 96.4 0.28 6.1E-06 45.5 15.8 335 35-432 5-369 (370)
395 KOG3846 L-kynurenine hydrolase 96.2 1.1 2.4E-05 42.1 20.3 154 87-275 114-278 (465)
396 KOG2040 Glycine dehydrogenase 84.1 61 0.0013 34.3 17.2 86 326-426 392-478 (1001)
397 KOG1201 Hydroxysteroid 17-beta 82.0 14 0.00031 35.0 10.0 141 107-279 36-182 (300)
398 PRK04296 thymidine kinase; Pro 78.3 38 0.00083 29.9 11.3 98 118-232 16-116 (190)
399 PF05368 NmrA: NmrA-like famil 77.3 9.2 0.0002 34.9 7.3 97 112-227 1-99 (233)
400 PRK08265 short chain dehydroge 71.9 45 0.00097 30.9 10.7 101 109-216 6-108 (261)
401 COG2102 Predicted ATPases of P 71.7 35 0.00075 30.9 9.0 99 112-226 4-116 (223)
402 COG1105 FruK Fructose-1-phosph 70.8 64 0.0014 31.0 11.1 60 168-230 108-167 (310)
403 PF00106 adh_short: short chai 62.5 47 0.001 28.1 8.1 100 112-217 3-110 (167)
404 PRK06483 dihydromonapterin red 62.4 89 0.0019 28.3 10.5 77 111-195 4-80 (236)
405 COG0505 CarA Carbamoylphosphat 61.1 16 0.00034 35.5 5.0 57 132-204 178-236 (368)
406 COG0329 DapA Dihydrodipicolina 60.7 1.3E+02 0.0029 28.8 11.5 107 87-229 56-166 (299)
407 PF13460 NAD_binding_10: NADH( 60.5 44 0.00095 28.9 7.7 90 112-223 1-90 (183)
408 PRK06463 fabG 3-ketoacyl-(acyl 60.3 1E+02 0.0022 28.2 10.6 80 109-196 7-86 (255)
409 COG1088 RfbB dTDP-D-glucose 4, 59.6 34 0.00074 32.6 6.8 110 111-237 2-136 (340)
410 TIGR01470 cysG_Nterm siroheme 59.3 1.1E+02 0.0024 27.5 10.1 97 107-231 7-104 (205)
411 COG2984 ABC-type uncharacteriz 58.5 1.8E+02 0.0039 28.1 12.4 126 79-229 66-195 (322)
412 PRK06500 short chain dehydroge 58.2 1E+02 0.0022 28.0 10.1 81 110-196 7-87 (249)
413 PRK05872 short chain dehydroge 56.9 95 0.0021 29.5 9.9 104 107-216 7-114 (296)
414 PRK12936 3-ketoacyl-(acyl-carr 56.6 1.2E+02 0.0025 27.5 10.2 82 109-196 6-87 (245)
415 PRK07063 short chain dehydroge 55.3 1.3E+02 0.0029 27.6 10.5 83 108-195 6-92 (260)
416 COG4221 Short-chain alcohol de 54.8 76 0.0016 29.3 8.1 100 111-217 7-111 (246)
417 PRK07067 sorbitol dehydrogenas 53.5 1.3E+02 0.0027 27.7 10.0 81 110-196 7-87 (257)
418 PRK06182 short chain dehydroge 53.1 1.3E+02 0.0029 27.9 10.2 97 111-216 5-103 (273)
419 PRK12481 2-deoxy-D-gluconate 3 53.0 1.2E+02 0.0027 27.7 9.8 83 109-198 8-91 (251)
420 PRK05717 oxidoreductase; Valid 52.2 1.4E+02 0.0031 27.3 10.1 83 108-196 9-91 (255)
421 COG3967 DltE Short-chain dehyd 50.3 1.1E+02 0.0024 27.7 8.0 35 107-141 3-37 (245)
422 smart00642 Aamy Alpha-amylase 48.9 76 0.0016 27.4 7.0 26 207-232 68-93 (166)
423 PRK07825 short chain dehydroge 48.8 1.4E+02 0.003 27.8 9.5 82 109-198 5-86 (273)
424 COG1648 CysG Siroheme synthase 48.8 1.6E+02 0.0035 26.6 9.3 96 107-231 10-107 (210)
425 COG1184 GCD2 Translation initi 47.6 2.5E+02 0.0054 26.9 10.6 108 107-232 117-232 (301)
426 PRK07231 fabG 3-ketoacyl-(acyl 47.3 1.6E+02 0.0036 26.6 9.7 85 108-197 4-89 (251)
427 PRK06194 hypothetical protein; 47.3 1.8E+02 0.0039 27.2 10.1 80 110-195 7-89 (287)
428 PRK06196 oxidoreductase; Provi 47.1 1.2E+02 0.0026 29.0 9.0 81 108-195 25-105 (315)
429 PRK06841 short chain dehydroge 47.0 2.1E+02 0.0045 26.1 10.3 82 109-196 15-96 (255)
430 PRK06179 short chain dehydroge 46.1 2.4E+02 0.0053 25.9 11.4 97 110-217 5-103 (270)
431 cd02742 GH20_hexosaminidase Be 45.0 32 0.00069 33.1 4.5 61 155-226 29-89 (303)
432 KOG1209 1-Acyl dihydroxyaceton 44.7 1.3E+02 0.0029 27.3 7.7 85 108-201 6-92 (289)
433 COG4050 Uncharacterized protei 44.4 59 0.0013 26.0 4.9 43 379-435 108-150 (152)
434 TIGR01832 kduD 2-deoxy-D-gluco 44.0 2.5E+02 0.0053 25.4 10.5 82 108-195 4-86 (248)
435 PF03652 UPF0081: Uncharacteri 43.9 66 0.0014 26.8 5.6 58 170-232 37-98 (135)
436 PRK06139 short chain dehydroge 43.8 1.9E+02 0.0041 28.1 9.8 102 108-216 6-113 (330)
437 PRK05693 short chain dehydroge 43.8 2.2E+02 0.0048 26.4 10.1 76 112-196 4-79 (274)
438 PRK08220 2,3-dihydroxybenzoate 43.5 2.5E+02 0.0055 25.4 11.0 76 108-195 7-82 (252)
439 PRK07024 short chain dehydroge 43.4 2.2E+02 0.0047 26.1 9.9 81 111-198 4-86 (257)
440 cd06568 GH20_SpHex_like A subg 43.1 26 0.00057 34.1 3.6 62 155-226 31-92 (329)
441 PRK08589 short chain dehydroge 42.5 2.3E+02 0.0049 26.4 9.9 100 109-216 6-112 (272)
442 PRK05867 short chain dehydroge 42.3 2.7E+02 0.0058 25.4 10.3 82 108-195 8-92 (253)
443 PRK05678 succinyl-CoA syntheta 42.3 84 0.0018 30.0 6.7 42 173-226 79-120 (291)
444 PRK05876 short chain dehydroge 42.3 2.6E+02 0.0057 26.1 10.3 101 109-216 6-112 (275)
445 COG0296 GlgB 1,4-alpha-glucan 42.1 31 0.00068 36.5 4.1 34 201-234 206-239 (628)
446 PF04412 DUF521: Protein of un 42.0 3.4E+02 0.0074 27.3 11.2 48 169-222 268-316 (400)
447 PRK07523 gluconate 5-dehydroge 41.7 2.7E+02 0.0059 25.3 10.7 83 108-196 9-94 (255)
448 PRK06935 2-deoxy-D-gluconate 3 41.5 2.8E+02 0.0061 25.3 10.3 82 108-196 14-98 (258)
449 PF02571 CbiJ: Precorrin-6x re 41.1 1.9E+02 0.0041 26.9 8.8 94 111-226 2-97 (249)
450 PRK06079 enoyl-(acyl carrier p 40.8 1.2E+02 0.0025 28.0 7.6 84 108-198 6-91 (252)
451 TIGR03573 WbuX N-acetyl sugar 40.8 2.2E+02 0.0048 27.8 9.7 108 109-237 60-175 (343)
452 cd00952 CHBPH_aldolase Trans-o 40.2 3.5E+02 0.0075 26.0 11.9 89 112-230 80-172 (309)
453 KOG1199 Short-chain alcohol de 40.2 1.3E+02 0.0027 26.3 6.7 77 112-194 12-88 (260)
454 PRK08862 short chain dehydroge 40.1 2.2E+02 0.0047 25.8 9.1 83 109-198 5-91 (227)
455 PRK06484 short chain dehydroge 39.7 1.9E+02 0.0041 29.9 9.7 82 110-198 6-87 (520)
456 COG0816 Predicted endonuclease 39.3 1.1E+02 0.0024 25.7 6.2 56 171-231 40-98 (141)
457 PRK08085 gluconate 5-dehydroge 39.2 2.8E+02 0.006 25.2 9.9 103 108-216 8-115 (254)
458 PRK02308 uvsE putative UV dama 39.1 3.4E+02 0.0073 26.1 10.4 53 341-393 53-108 (303)
459 PRK06114 short chain dehydroge 39.0 3E+02 0.0066 25.1 10.1 83 107-195 6-92 (254)
460 KOG2741 Dimeric dihydrodiol de 38.9 66 0.0014 31.3 5.4 73 142-232 60-132 (351)
461 PRK08278 short chain dehydroge 38.5 3.3E+02 0.0071 25.3 10.8 81 110-196 7-97 (273)
462 KOG1465 Translation initiation 38.1 3.7E+02 0.008 25.8 10.5 105 107-228 160-270 (353)
463 PRK06398 aldose dehydrogenase; 38.1 3.2E+02 0.007 25.1 10.8 94 108-216 5-101 (258)
464 PRK08057 cobalt-precorrin-6x r 38.0 2.8E+02 0.006 25.8 9.4 92 110-226 3-96 (248)
465 TIGR03325 BphB_TodD cis-2,3-di 37.8 1.3E+02 0.0029 27.7 7.4 83 109-198 5-87 (262)
466 COG2870 RfaE ADP-heptose synth 37.8 1.9E+02 0.0042 28.9 8.3 107 112-229 69-178 (467)
467 PRK08643 acetoin reductase; Va 37.7 3.2E+02 0.0069 24.9 10.2 99 112-216 5-108 (256)
468 PRK07109 short chain dehydroge 37.7 2.9E+02 0.0063 26.7 10.1 84 108-198 7-93 (334)
469 PRK08263 short chain dehydroge 37.6 2.6E+02 0.0057 25.9 9.5 100 111-216 5-106 (275)
470 PRK08063 enoyl-(acyl carrier p 37.5 2.6E+02 0.0056 25.3 9.3 81 110-196 5-89 (250)
471 PF02571 CbiJ: Precorrin-6x re 37.5 2E+02 0.0043 26.8 8.3 18 108-125 129-146 (249)
472 PRK12384 sorbitol-6-phosphate 37.3 2.8E+02 0.0061 25.3 9.6 81 111-196 4-88 (259)
473 TIGR01019 sucCoAalpha succinyl 37.3 1E+02 0.0023 29.3 6.5 42 173-226 77-118 (286)
474 TIGR03649 ergot_EASG ergot alk 37.1 2.8E+02 0.006 25.9 9.7 95 112-223 2-97 (285)
475 TIGR00290 MJ0570_dom MJ0570-re 36.9 2.1E+02 0.0046 26.1 8.2 99 112-226 4-115 (223)
476 PRK06057 short chain dehydroge 36.8 3.3E+02 0.0071 24.8 10.1 81 108-196 6-86 (255)
477 PRK07856 short chain dehydroge 36.2 3.3E+02 0.0072 24.7 10.8 77 109-196 6-82 (252)
478 cd00951 KDGDH 5-dehydro-4-deox 36.2 2E+02 0.0044 27.3 8.4 57 168-227 15-74 (289)
479 PRK08277 D-mannonate oxidoredu 36.2 3.5E+02 0.0077 25.0 10.3 82 108-195 9-93 (278)
480 cd06562 GH20_HexA_HexB-like Be 36.1 39 0.00086 33.2 3.6 57 155-226 31-87 (348)
481 PRK06128 oxidoreductase; Provi 36.0 3.8E+02 0.0082 25.3 10.8 102 109-217 55-165 (300)
482 cd00408 DHDPS-like Dihydrodipi 35.7 1.5E+02 0.0032 27.9 7.5 51 168-221 12-62 (281)
483 PRK08267 short chain dehydroge 35.6 3.1E+02 0.0067 25.0 9.6 80 112-196 4-84 (260)
484 PRK12859 3-ketoacyl-(acyl-carr 35.3 2.2E+02 0.0047 26.2 8.5 102 108-216 5-125 (256)
485 PRK12743 oxidoreductase; Provi 35.3 2.5E+02 0.0055 25.6 8.9 80 111-196 4-87 (256)
486 PRK07791 short chain dehydroge 35.1 3.9E+02 0.0083 25.1 10.6 83 109-198 6-100 (286)
487 PRK08226 short chain dehydroge 34.7 3.6E+02 0.0078 24.6 10.5 81 109-196 6-89 (263)
488 PF02662 FlpD: Methyl-viologen 34.5 84 0.0018 25.7 4.8 59 155-223 28-91 (124)
489 PRK10538 malonic semialdehyde 34.5 3.1E+02 0.0067 24.9 9.3 78 112-195 3-80 (248)
490 COG0552 FtsY Signal recognitio 34.2 1.5E+02 0.0032 28.8 7.0 106 116-232 150-270 (340)
491 TIGR00683 nanA N-acetylneurami 34.1 2.2E+02 0.0048 27.1 8.3 53 167-221 14-66 (290)
492 PRK06482 short chain dehydroge 34.0 3E+02 0.0066 25.4 9.3 80 111-196 4-83 (276)
493 PRK06200 2,3-dihydroxy-2,3-dih 33.9 1.5E+02 0.0032 27.4 7.1 84 108-198 5-88 (263)
494 PF00701 DHDPS: Dihydrodipicol 33.8 2E+02 0.0044 27.2 8.1 58 167-227 15-75 (289)
495 PF00265 TK: Thymidine kinase; 33.8 1E+02 0.0023 26.9 5.6 112 116-251 12-128 (176)
496 TIGR02415 23BDH acetoin reduct 33.8 2.7E+02 0.0059 25.2 8.9 86 112-203 3-91 (254)
497 PRK05993 short chain dehydroge 33.7 3.7E+02 0.008 25.0 9.9 76 111-195 6-82 (277)
498 PRK06731 flhF flagellar biosyn 33.7 2.3E+02 0.005 26.7 8.2 56 172-232 138-197 (270)
499 COG1587 HemD Uroporphyrinogen- 33.6 3.9E+02 0.0084 24.6 10.8 94 114-223 104-199 (248)
500 PRK10595 SOS cell division inh 33.5 3.2E+02 0.0069 23.6 9.5 99 111-224 30-136 (164)
No 1
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6e-73 Score=525.65 Aligned_cols=423 Identities=67% Similarity=1.142 Sum_probs=405.8
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
+||+++.++-|.++|.||..|..++.++|++.+||.|+|+|+.+||.++.+++.+++.+.+++..++.++...+.++..|
T Consensus 38 ~lS~~~~~~~~~e~S~yf~g~~~y~~npy~~~~Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~f 117 (471)
T KOG0256|consen 38 LLSSKAVDDKHGEDSSYFYGWKAYEKNPYDPIKNPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMF 117 (471)
T ss_pred hcccccccccccccchHHHHHHhcccCCCCCCCCchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhc
Confidence 48999999999999999999999999999999999999999999999999999999999999888888888888899999
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
+++.|.+.+|+++|+++.+..++.+..+|+++++++|++.++..++.+|++|||..|+|+|.|+++...++...|+++++
T Consensus 118 qdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivp 197 (471)
T KOG0256|consen 118 QDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVP 197 (471)
T ss_pred ccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+.+..+++|.++.++||++++++++.+.+++.|+++||+||.|.+++++++..+++++.++++++|+||+|+..+|+..
T Consensus 198 v~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~- 276 (471)
T KOG0256|consen 198 VHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKS- 276 (471)
T ss_pred EEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
.|.+++++..+. ..+.++|++++|+||.||+||+|+|.|...++.+..+..++..|+.+|++.|..++.+|.|.
T Consensus 277 -~F~Sv~ev~~~~-----~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~ 350 (471)
T KOG0256|consen 277 -EFRSVLEVRKDP-----HLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDE 350 (471)
T ss_pred -CceEHHHHhhcc-----ccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchH
Confidence 899999987753 12568999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
.|.+.++++++++++.+.+++.+.|+++||++.++++|+|+|+++...+...+++.+.+++.+++.+-++.+.||+.|.+
T Consensus 351 ~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C 430 (471)
T KOG0256|consen 351 EFTREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHC 430 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCccee
Confidence 99999999999999999999999999999999999999999999999999889999999999999888999999999999
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
..+||||+||+...++.++.+++||+.++.
T Consensus 431 ~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 431 HEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred cCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 999999999998778888889999999998
No 2
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.4e-70 Score=558.01 Aligned_cols=455 Identities=52% Similarity=0.921 Sum_probs=386.4
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
+||+.|.++.|.+++.||..|..++.++|++..||.|+|+|+++||+++.+.+.+++++.+...++..+++..+.++..|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 90 (496)
T PLN02376 11 ILSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANF 90 (496)
T ss_pred hhhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhcc
Confidence 58999999999999999999999999999999999999999999999999999999999876655554455556677789
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
+++.|.++||++||+++++.+|..+++++++|++|+|+++++..++.++++|||.|++++|+|+.|...+....|+++++
T Consensus 91 ~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~ 170 (496)
T PLN02376 91 QDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIP 170 (496)
T ss_pred CCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEE
Confidence 99999999999999999998886677899999999999999999999999999999999999999998777433999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++++.+++|.++++.++++++...+.+.++|+|+++|||||||.++|.+++++|+++|++++++||+||+|+++.|.+.
T Consensus 171 v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~- 249 (496)
T PLN02376 171 VPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG- 249 (496)
T ss_pred EeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC-
Confidence 9998767899999999988765544456899999999999999999999999999999999999999999999888765
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
.+.++.++..+++. .+.+.+++++++||||.||+||+|+||++++++.+....+++..++.+++++|.++..++.+.
T Consensus 250 -~~~si~~l~~~~~~--~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~ 326 (496)
T PLN02376 250 -DFVSVAEVVNDVDI--SEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDD 326 (496)
T ss_pred -CcccHHHhhccccc--cccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCh
Confidence 56777776543200 000124678899999999999999999999878787777777777778999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-CChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-NTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
++++++++++++.++++++.+.+.|++.|+++.++++|+|+|++++..... .....+.+++..++++.||.|.||+.|+
T Consensus 327 ~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~ 406 (496)
T PLN02376 327 QFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFR 406 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccC
Confidence 887889999999999999999999999999999999999999999865433 3334556788999888899999999998
Q ss_pred CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCcccc------------ccccceeeeeeeeeeeccccCC
Q 037587 400 CNEPGWFRICFANITEETLQVALQRIKVFAQSCNPQML------------LLQRRSIIGKWISKLSSSSSYD 459 (464)
Q Consensus 400 ~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 459 (464)
...++||||+|+..+++++++++++|++++.+.+.... ..+...+.++|.++|||+..|+
T Consensus 407 ~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (496)
T PLN02376 407 CTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKNKIVEKASENDQVIQNKNAKKLKWRQSNLRLSFRRLYE 478 (496)
T ss_pred CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhhcccccccccccccchhhcchhhhhccceeeccchhhh
Confidence 77789999999976889999999999999987664311 1112222334458998854454
No 3
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.5e-67 Score=531.80 Aligned_cols=429 Identities=60% Similarity=1.041 Sum_probs=374.6
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
+||+++.++.|.+++.|+..|+.+..++|++..||.|+|+|+++||.+..+.+.+++++.++...+...+.....++..|
T Consensus 12 ~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y 91 (447)
T PLN02607 12 GLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALF 91 (447)
T ss_pred hhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhcc
Confidence 58999999999999999999999999999999999999999999999999999999999866543332222234456779
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
.++.|.++||+++|++++++++...++++++|++|+|+++++..++.++++|||.|++++|+|+.|...+....|+++++
T Consensus 92 ~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~ 171 (447)
T PLN02607 92 QDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVP 171 (447)
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEE
Confidence 99999999999999999998876667899999999999999999999999999999999999999988776434999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++++.+++|.++++.++++++++.+.+.++|+|+++|||||||.++|.+++++++++|+++++++|+||+|+++.|+..
T Consensus 172 v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~- 250 (447)
T PLN02607 172 IHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS- 250 (447)
T ss_pred EeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-
Confidence 9998777899999999999988777778999999999999999999999999999999999999999999999888765
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
++.++.++....+ ..+..++|++++||||.||++|+|+||+++.++.+...++....+..+++++|.++..+|.+.
T Consensus 251 -~f~S~~s~~~~~~---~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~ 326 (447)
T PLN02607 251 -EFVSVAEIVEARG---YKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDE 326 (447)
T ss_pred -CcccHHHHHhhcC---CCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCc
Confidence 5677776643210 001247899999999999999999999999777777777777767668999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
++.++++++++++++++++.+.+.|++.|+++.++++|+|+|++++........+.+.+++.++++++||.|.||..|+.
T Consensus 327 ~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~ 406 (447)
T PLN02607 327 EFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC 406 (447)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC
Confidence 88778999999999999999999999999999999999999999986543333344557888888888999999999988
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCc
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
..++||||+|+..+++.+++++++|.+++++++.
T Consensus 407 ~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~ 440 (447)
T PLN02607 407 SEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKT 440 (447)
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999976899999999999999987764
No 4
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.8e-65 Score=516.97 Aligned_cols=457 Identities=74% Similarity=1.219 Sum_probs=379.1
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
++|....+..+..+..|+..|..+..++|++..+|.|+|+|+++||+++.+.+.++++..++...+...+......+..|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y 82 (468)
T PLN02450 3 LLSRKATCNSHGQDSSYFLGWEEYEKNPYDEIKNPSGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALF 82 (468)
T ss_pred ccchhhcccccCCCCchHHHHHHHhcCCCCcccCCCeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcC
Confidence 47888999999999999999999999999999999999999999999999999998887543211111111112345679
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
+++.|.++||++||+++++.++.++++++++|++|+|+++++..++.++++|||.|++++|+|+.|...+....|+++++
T Consensus 83 ~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~ 162 (468)
T PLN02450 83 QDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVP 162 (468)
T ss_pred CCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEE
Confidence 99999999999999999988876667899999999999999999999999999999999999999988777434999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++++++++|.++++.+++++.+..+.+.++++|+++|||||||.++|.+++++|+++|++++++||+||+|+++.|.+.
T Consensus 163 v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~- 241 (468)
T PLN02450 163 IHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP- 241 (468)
T ss_pred EecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC-
Confidence 9998677899999999999877555566899999999999999999999999999999999999999999999878654
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
.+.++..+..+... ...+..++|++++||||.||++|+|+||++++++.+.+.+.+...++.++.++|.++..+|++.
T Consensus 242 -~~~s~l~~~~~~~~-~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~ 319 (468)
T PLN02450 242 -GFVSVMEVLKDRKL-ENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDK 319 (468)
T ss_pred -CcccHHHHhhhccc-ccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCc
Confidence 45565544321000 0001347999999999999999999999999877766666666666668899999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
.+...+++++++.++++++.+.+.|+++|+++.++++|+|+|++++.......+..+.+++..+++++||.|.||+.|+.
T Consensus 320 ~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~ 399 (468)
T PLN02450 320 KFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC 399 (468)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC
Confidence 87556889999999999999999999999999999999999999986554444455567888998889999999999987
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC----c----cccccccceeeeeeeeeeeccccCCCCCC
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQSCN----P----QMLLLQRRSIIGKWISKLSSSSSYDQEPD 463 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (464)
..++||||+++..+++++++++++|++++++.. + |...+-.+.--.||--+++| .|.||.
T Consensus 400 ~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 467 (468)
T PLN02450 400 TEPGWFRVCFANMSEETLDLAMKRLKSFVESDSGRRINKSSHQRLKNLRRKTVSKWVFRLSF---HDREPE 467 (468)
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHHHHHHHhccccccccchhcccccccchhhhccceEEee---ccCCcC
Confidence 678999999997688999999999999997665 1 33334444445689988876 466664
No 5
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-58 Score=454.79 Aligned_cols=357 Identities=27% Similarity=0.500 Sum_probs=307.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc-EE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK-LV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-i~ 113 (464)
.++|+|+++++.++ ++.+.+++...... ... .|.+..|.++||++||+++.+.++ +.+++++ |+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~-----------~~~-~Y~~~~G~~~LReaia~~~~~~~~--~~~~~~~eii 93 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEE-----------GGT-HYTPSAGIPELREAIAEKYKRRYG--LDVDPEEEII 93 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhc-----------ccC-CCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 68999999999886 45566665553211 111 777899999999999999999887 5577776 99
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.++++|||.|++++|.|+.|...+... |.+++.++++.+ ++|.+|++.+++++.+ ++|+
T Consensus 94 vt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~-gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~ 166 (393)
T COG0436 94 VTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLA-GGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKA 166 (393)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEEeCCcCccCCcCCHHHHHhhcCc------cceE
Confidence 9999999999999999999999999999999999999877 999999998655 4899999999999876 8999
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.+++.+++++|+++|++|+++||.||+|.++.|++. .+.++.++.+ ..++++++.|||
T Consensus 167 i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~---------~~~~~i~i~s~S 235 (393)
T COG0436 167 IILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAG---------ARDRTITINSFS 235 (393)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCC---------CcceEEEEeccc
Confidence 99999999999999999999999999999999999999999999875 4567666633 247999999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G 349 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 349 (464)
|.|+|+|||+||++++++.+.+.+.++... .+++.+.|.++..+|+.++. ....+.+++.+++||+.+.+.|.+. |
T Consensus 236 K~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g 314 (393)
T COG0436 236 KTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGG 314 (393)
T ss_pred ccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999756676666544433 35788999999999998754 4567888899999999999999988 5
Q ss_pred Ceeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 350 IRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 350 ~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.+.. |+|+||+|++++.. .+..+++.+|+++.||.|.||+.|+.. +.+++|||++. +++++++++++|.+
T Consensus 315 ~~~~~~p~Ga~Y~~~~i~~~------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~ 387 (393)
T COG0436 315 LSVVKPPEGAFYLFPKIPEL------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLAR 387 (393)
T ss_pred eeeccCCCeeEEEEeecCCC------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHH
Confidence 88887 88999999999875 224479999999999999999999985 78999999996 66999999999999
Q ss_pred HHHhh
Q 037587 428 FAQSC 432 (464)
Q Consensus 428 ~l~~~ 432 (464)
+++..
T Consensus 388 ~~~~~ 392 (393)
T COG0436 388 FLAEY 392 (393)
T ss_pred HHHhc
Confidence 98765
No 6
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.8e-53 Score=426.16 Aligned_cols=355 Identities=19% Similarity=0.324 Sum_probs=285.7
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
+.++|+|+.|+++++ ++.+.+++.+.... .....|++..|.++||++||+++.+.+| ++++++ +|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHD-----------PSTHGYLLFHGTLDFREAAAQWYEQRFG--LAVDPETEV 95 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------cccCCCCCCCCCHHHHHHHHHHHHHhhC--CcCCCcCeE
Confidence 456899999999886 56666666553110 2345799889999999999999987766 457888 69
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++.+||.|++++|+|+.|...++.. |++++.++++++++|.+|++.+++.+.. ++++
T Consensus 96 ~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 168 (388)
T PRK07366 96 LPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLA-GGQIYPMPLRAENDFLPVFADIPTEVLA------QARL 168 (388)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEECCCccCCCCCHHHHHHhhcc------cceE
Confidence 99999999999999999999999999999999999988877 9999999998777888999998877643 6899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++.. ...++.++.. ..+++++++|||
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~---------~~~~vi~~~SfS 238 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV-EPPSILQADP---------EKSVSIEFFTLS 238 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC-CCCChhhCCC---------CcccEEEEeecc
Confidence 999999999999999999999999999999999999999998776530 1344444422 235789999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCC---ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLV---SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG 349 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 349 (464)
|+||+||+|+||+++++ .+.+.+.+....+.. +.+.|.++..+..+ ++++++.++.++++++.+.+.|+++|
T Consensus 239 K~~g~~GlRiG~~v~~~-~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~----~~~l~~~~~~~~~~r~~l~~~L~~~~ 313 (388)
T PRK07366 239 KSYNMGGFRIGFAIGNA-QLIQALRQVKAVVDFNQYRGILNGAIAALTGP----QATVQQTVQIFRQRRDAFINALHQIG 313 (388)
T ss_pred cccCCcchhheehcCCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999854 455555555443322 22344444444333 45688899999999999999999989
Q ss_pred CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+.+..+++|+|+|++++..... ...+++..+++++||.|+||+.|+...++|+||+++. +++++++++++|++++
T Consensus 314 ~~~~~p~~g~f~~~~~~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 314 WPVPLPEATMYVWAKLPEPWQG----NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred CcccCCCeeEEEEEECCcccCC----CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 8877789999999999864321 1235777887888999999999976556899999985 7999999999998763
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-52 Score=418.88 Aligned_cols=350 Identities=21% Similarity=0.343 Sum_probs=290.0
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i 112 (464)
..++|+|+.+.++++ ++.+.+++.+.... .....|+ ..|.++||++||+++++.+| +++++ ++|
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-----------~~~~~y~-~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 96 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQ-----------KESYGYT-LSGIQEFHEAVTEYYNNTHN--VILNADKEV 96 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhc-----------cccCCCC-CCCcHHHHHHHHHHHHHHhC--CCCCCCCeE
Confidence 457899999998774 46666666553110 1223454 47899999999999998776 55788 899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||.|++++|+|+.|...+... |+++++++++++++|.+|++.+++.+.. ++++
T Consensus 97 ~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 169 (399)
T PRK07681 97 LLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMA-GATSYYMPLKKENDFLPDLELIPEEIAD------KAKM 169 (399)
T ss_pred EECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999999988876 9999999998777899999999888754 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. ...++.++.. ..+++++++|||
T Consensus 170 v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~S 238 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPG---------AKEVGVEINSLS 238 (399)
T ss_pred EEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCC---------CcccEEEEeecc
Confidence 99999999999999999999999999999999999999999877654 3345444422 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|+||++|+|+||+++++ .+.+.+..... .++++.+.|.++..++.+.. +++++.++.++++++.+.+.|++.|+
T Consensus 239 K~~~~~GlRiG~~i~~~-~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~ 314 (399)
T PRK07681 239 KSYSLAGSRIGYMIGNE-EIVRALTQFKSNTDYGVFLPIQKAACAALRNGA---AFCEKNRGIYQERRDTLVDGFRTFGW 314 (399)
T ss_pred cccCCccceeEEEecCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 99999999999999854 45555554432 34688899999999998753 46788888999999999999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++..+.+|+|+|++++.... ..+++..+++++||.|+||..|+...++++||+++. +++++++++++|++
T Consensus 315 ~~~~p~~g~f~~~~l~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 315 NVDKPAGSMFVWAEIPKGWT------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred cccCCCeeeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 88778899999999985322 235788888778999999999976567899999984 78999999999988
No 8
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-51 Score=414.07 Aligned_cols=366 Identities=23% Similarity=0.339 Sum_probs=291.8
Q ss_pred CCCceEEeeccccccc-HH-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-
Q 037587 34 NPSGIIQMGLAENQLS-FD-LLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN- 110 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~- 110 (464)
++.++++|+.+.+..+ ++ .+.+..+... ......|++..|.++||+++|+++++.++ +.++++
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~--~~~~~~~ 96 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLCESAQ------------KPKTHGYSVSKGIYKLRLAICNWYKRKYN--VDLDPET 96 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHHHHhc------------CCccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCC
Confidence 4567899998865543 22 3333322210 02356899999999999999999987766 457787
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc-CCc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL-NLK 189 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~ 189 (464)
+|++|+|+++++..++.+++++||.|++++|+|+.+...+... |+++++++++.+++|.+|++.+...+++..+. .++
T Consensus 97 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 97 EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILA-GGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 7999999999999999999999999999999999999888877 99999999865567889988775555443322 347
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. .+.++..+.. ..+++++++
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~---------~~~~~i~~~ 244 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEG---------AKDVAVESY 244 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCC---------ccccEEEEE
Confidence 89999999999999999999999999999999999999999999877653 3345444411 235788899
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV 347 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (464)
||||.||+||+|+||++++++ +...+.+.... ..++++.|.++..+++.. .+++++.++.++++++.+.+.|++
T Consensus 245 S~SK~~~~~GlRiG~iv~~~~-li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~ 320 (403)
T PRK08636 245 TLSKSYNMAGWRVGFVVGNKK-LVGALKKIKSWLDYGMFTPIQVAATIALDGD---QSCVEEIRETYRKRRDVLIESFAN 320 (403)
T ss_pred ecccccCCccceeeeeeCCHH-HHHHHHHHHHHhcccCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998554 55555444332 346678888887777532 457888899999999999999999
Q ss_pred CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 348 ~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
.|+.+.++++|+|+|++++...... ...+++..+++++||.|.||..|+....+|+||+++ .+++++++++++|++
T Consensus 321 ~~~~~~~p~~g~~~~~~l~~~~~~~---~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 321 AGWELQKPRASMFVWAKIPEPARHL---GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKK 396 (403)
T ss_pred CCCcccCCCcceEEEEECCCccCCC---CHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHH
Confidence 8888888999999999998643211 134577788878899999999998666789999998 589999999999999
Q ss_pred HHHhhC
Q 037587 428 FAQSCN 433 (464)
Q Consensus 428 ~l~~~~ 433 (464)
+++.++
T Consensus 397 ~l~~~~ 402 (403)
T PRK08636 397 FLKELE 402 (403)
T ss_pred HHHhhc
Confidence 998754
No 9
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-52 Score=414.78 Aligned_cols=360 Identities=18% Similarity=0.320 Sum_probs=289.4
Q ss_pred CCCCceEEeeccccc-c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-
Q 037587 33 HNPSGIIQMGLAENQ-L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP- 109 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~- 109 (464)
.-+.++|+|+.+... . +++.+.+.+.+... ......|++..|.++||++|++++.+.+| +++++
T Consensus 36 ~~~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~LR~aia~~l~~~~g--~~~~~~ 102 (405)
T PRK06207 36 PLPGRPVDFSHGDVDAHEPTPGAFELFSAGVE-----------RGGVQAYTEYRGDADIRELLAARLAAFTG--APVDAA 102 (405)
T ss_pred cCCCCceecCCcCCCCCCCCHHHHHHHHHHHh-----------cCCCccCCCCCCCHHHHHHHHHHHHHHhC--CCCCCC
Confidence 446778999986543 3 34555555444211 02245799999999999999999998876 45677
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC---CCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS---SSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~---~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
++|++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++ .+++|.+|++.|++.+.+
T Consensus 103 ~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---- 177 (405)
T PRK06207 103 DELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---- 177 (405)
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeccccCcccCCCcCHHHHHHhhhh----
Confidence 89999999999999999999999999999999999999888876 9999999986 334688999999998865
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. .+.++..+.. ..++++
T Consensus 178 --~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~---------~~~~vi 244 (405)
T PRK06207 178 --GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPI---------DPENVI 244 (405)
T ss_pred --cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCC---------CcCcEE
Confidence 688999999999999999999999999999999999999999999887654 3334333311 347999
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
+++||||+||+||+|+||+++++ .+.+.+...... ...+.+.|.++..++++.. .++++.++.++++++.+.+.
T Consensus 245 ~i~SfSK~~~lpGlRiG~ii~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~ 320 (405)
T PRK06207 245 TIMGPSKTESLSGYRLGVAFGSP-AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPD---GWMKDRIARHQAIRDDLLRV 320 (405)
T ss_pred EEecchhhccCcccceEEEEcCH-HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999854 455555544433 2356789999999997641 23555566677788999999
Q ss_pred HHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 037587 345 LKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 345 l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
|+++ ++.+.++++|+|+|++++... .+..+++..+++++||.|.||..|+...+++|||+++. ++++++++++
T Consensus 321 L~~~~~~~~~~p~gg~fl~~~l~~~~-----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~ 394 (405)
T PRK06207 321 LRGVEGVFVRAPQAGSYLFPRLPRLA-----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAE 394 (405)
T ss_pred HhcCCCceecCCCeeEEEEEeCcccC-----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHH
Confidence 9887 788888999999999998521 11235777877778999999999976667899999996 8899999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++.+
T Consensus 395 rl~~~l~~~~ 404 (405)
T PRK06207 395 RIAQLIERYR 404 (405)
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 10
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1e-51 Score=413.41 Aligned_cols=353 Identities=21% Similarity=0.351 Sum_probs=285.8
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-c
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-K 111 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~ 111 (464)
.+.++|+|+.+.+.++ ++.+.+++...... .....|++..|.++||+++|+++++.+| ++++++ +
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~~g--~~~~~~~~ 96 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAEN-----------PANHKYSPFRGYPFLKEAAADFYKREYG--VTLDPETE 96 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcc
Confidence 3456899999966654 35556655543110 2346798888999999999999987766 457888 8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|++|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++++++++|.+|++++++.+.+ +++
T Consensus 97 i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~ 169 (389)
T PRK08068 97 VAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALA-RAQFETMPLIAENNFLPDYTKIPEEVAE------KAK 169 (389)
T ss_pred EEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhc-CCEEEEeecccccCCCCCHHHHHHhccc------cce
Confidence 999999999999999999999999999999999999888876 9999999998666889999999988754 789
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. ...+...... ..+++++++||
T Consensus 170 ~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~--~~~s~~~~~~---------~~~~~i~~~S~ 238 (389)
T PRK08068 170 LMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQ--KPVSFLQTPG---------AKDVGIELYTL 238 (389)
T ss_pred EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCC--CCcChhhCCC---------ccCCEEEEecc
Confidence 999999999999999999999999999999999999999998777643 2234333321 33688999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG 349 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 349 (464)
||+||++|+|+||++++ +.+.+.+.+....+ +.+++.|.++..++.+. .++++..++.++++++.+.+.|+++|
T Consensus 239 SK~~g~~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 239 SKTFNMAGWRVAFAVGN-ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSD---QSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred hhccCCccceeEeEecC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999985 45555555544333 33456788877777543 25678889999999999999999999
Q ss_pred CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
+.+.++++|+|+|++++.... ..+++..+++++||.|+||..|+..+++++||+++. +++.+.+++++|+++
T Consensus 315 ~~~~~~~g~~~~~v~~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 315 WEVDAPKGSFFAWMPVPKGYT------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred CcccCCCeeEEEEEECCCCCC------HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 998899999999999985322 235778887778999999999986567899999985 778899999888763
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.4e-51 Score=416.63 Aligned_cols=365 Identities=19% Similarity=0.286 Sum_probs=290.3
Q ss_pred CCceEEeecccc---cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN---QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
..++++|+.+++ .+ +++.+.+++.+.... .....|++..|.++||+++|+++++.+| +.++++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~LReaia~~~~~~~g--~~~~~~ 97 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMD-----------DKSYGYCPTKGVLETREFLAELNNKRGG--AQITPD 97 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhccC--CCCCHh
Confidence 346789988876 23 355666665553210 2346799999999999999999988765 567899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++..++. ++.+||.|++++|+|+.|........|++++.++++++++|.+|+++|++.+.+ ++++
T Consensus 98 ~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~ 172 (433)
T PRK06855 98 DIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKY----NPSI 172 (433)
T ss_pred HEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhc----CCCc
Confidence 99999999999999985 789999999999999987654332238899999988777899999999998853 2367
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++++++|||||||.++|.+++++|+++|+++|++||+||+|.++.|.+. .+.++.++.+ ..++++++|
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~sl~~~~~----------~~~~I~~~S 240 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGK--KTVPLSEVIG----------DVPGIALKG 240 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCCHHHHcC----------cCCeEEEec
Confidence 8899999999999999999999999999999999999999999888654 4456665533 136799999
Q ss_pred CCcCCCCCccEEEEEEecC----HHHHHHHHHh---c-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNN----ERVVSAATKM---S-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~----~~~~~~~~~~---~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
|||.|++||+|+||+++++ +.+...+..+ . ....++++.|.++..++.++.+ +++++++++.++++++.+.
T Consensus 241 ~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~ 319 (433)
T PRK06855 241 ISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAY 319 (433)
T ss_pred CccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999742 2222222221 1 2234678999999999998776 7889999999999999999
Q ss_pred HHHHhC-CCeeecCCccEEEEEecCccccc-------C--C------------hhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 343 SGLKVA-GIRCLKSNAGLFCWVDMRHLLVS-------N--T------------FEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 343 ~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~-------~--~------------~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
+.|++. |+.+.+|+||||+|++++..... . . .....+++..+++++||.+.||+.|+.
T Consensus 320 ~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~ 399 (433)
T PRK06855 320 EKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCT 399 (433)
T ss_pred HHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCC
Confidence 999887 78888999999999999864200 0 0 001346777888899999999999975
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
. ..++||+++..+++++++++++|++++++
T Consensus 400 ~-~~~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 400 E-LNGFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred C-CCceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 3 34599999977899999999999999874
No 12
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=3e-51 Score=411.39 Aligned_cols=361 Identities=24% Similarity=0.352 Sum_probs=289.2
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
..++|+|+.++++++ ++.+.+.+..... ......|++..|.++||+++|+++++.+| +.++++ +|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~I 95 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQ-----------DPRTHRYSASKGIPGLRRAQAAYYARRFG--VKLNPDTQV 95 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHc-----------CcccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 456899999988764 3444444443211 02346899999999999999999987766 446787 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++.+++|..+ +++.++. ..+++++
T Consensus 96 ~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~~---l~~~~~~---~~~~~~~ 168 (405)
T PRK09148 96 VATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMA-GGVIRSVPAEPDEEFFPA---LERAVRH---SIPKPIA 168 (405)
T ss_pred EEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhc-CCEEEEEeCCCCCCCccC---HHHHHhh---ccccceE
Confidence 99999999999999999999999999999999998888776 999999998765555434 4444332 1237889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. .+.++..+.. ..+++++++|||
T Consensus 169 v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~~~s~~~~~~---------~~~~~i~~~SfS 237 (405)
T PRK09148 169 LIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN--PPPSVLQVPG---------AKDVTVEFTSMS 237 (405)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCC--CCCChhhCCC---------ccCcEEEEeccc
Confidence 99999999999999999999999999999999999999999877654 3344444311 236788999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||+||+|+||++++ +.+.+.+.+... .+++++++|.++..++++. ++++++.++.++++++.+.+.|+++|+
T Consensus 238 K~~~~pGlR~G~~v~~-~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~ 313 (405)
T PRK09148 238 KTFSMAGWRMGFAVGN-ERLIAALTRVKSYLDYGAFTPIQVAATAALNGP---QDCIAEMRELYKKRRDVLVESFGRAGW 313 (405)
T ss_pred cccCCcchheeeeeCC-HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999985 455555655543 2456789999999999764 456888899999999999999999998
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+.++++|+|+|++++...... .+.+++..+++++||.|+||..|+...++|+||+++ .+++.+.+++++|.++++
T Consensus 314 ~~~~p~~g~f~~~~l~~~~~~~---~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~-~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 314 DIPPPAASMFAWAPIPEAFRHL---GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV-ENEQRIRQAARNIKRFLS 389 (405)
T ss_pred ccCCCCeeEEEEEECCCccCCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 8878899999999998643211 134677888878899999999997655789999998 589999999999999998
Q ss_pred hhCc
Q 037587 431 SCNP 434 (464)
Q Consensus 431 ~~~~ 434 (464)
++.+
T Consensus 390 ~~~~ 393 (405)
T PRK09148 390 SADE 393 (405)
T ss_pred HHHH
Confidence 7765
No 13
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.6e-51 Score=418.99 Aligned_cols=346 Identities=23% Similarity=0.381 Sum_probs=277.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChhhhcccCCC
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGFDRDLKWRPG 155 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~~g 155 (464)
...|++..|.++||++||+++++.+| +++++++|++|+|+++++..++++++ ++||.|++++|+|+.|...++.. |
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~-g 184 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDG--VPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLL-G 184 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcC--CCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHc-C
Confidence 46799999999999999999998766 56789999999999999999999998 79999999999999999998877 9
Q ss_pred cEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 156 VEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 156 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
.+++.++++++++|.+|++.|++.+.+....+.++++++++|||||||.++|.+++++|+++|++++++||+||+|.++.
T Consensus 185 ~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~ 264 (481)
T PTZ00377 185 GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENI 264 (481)
T ss_pred CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhc
Confidence 99999999877889999999999987644444578999999999999999999999999999999999999999999988
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCC---CCcEEEEcCCCcC-CCCCccEEEEEEe--cCHHHHHHHHHhc-ccCCCChH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDL---WSRIHIVYSLSKD-FSMPGFRVGMIYS--NNERVVSAATKMS-SFGLVSSQ 308 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~vi~l~S~SK~-~g~~GlRiG~l~~--~~~~~~~~~~~~~-~~~~~s~~ 308 (464)
|.+. ..+.++..+..++. .. ..++++++||||. ++++|+|+||+++ .++.+.+.+.+.. ..+.++++
T Consensus 265 ~~~~-~~~~s~~~~~~~l~-----~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~ 338 (481)
T PTZ00377 265 YDGE-KPFISFRKVLLELP-----AEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVV 338 (481)
T ss_pred cCCC-CCcccHHHHHHhhc-----ccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChH
Confidence 8432 13455554433221 01 1379999999997 6999999999986 2455555554443 33457889
Q ss_pred HHHHHHHHcCCch-----h--hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecC--ccccc----CCh
Q 037587 309 TQYLLSRMLSDKK-----F--TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMR--HLLVS----NTF 374 (464)
Q Consensus 309 ~q~~~~~~l~~~~-----~--~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~--~~~~~----~~~ 374 (464)
+|.++..++++.. + ..+++++.+..++++++.+.+.|.++ |+.+.+|+||||+|++++ ..... ...
T Consensus 339 ~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~ 418 (481)
T PTZ00377 339 GQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGL 418 (481)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCC
Confidence 9999999996421 1 12334444556899999999999988 899999999999998764 21110 001
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
..+.+++..+++++||.|.||+.|+.. +.++||||++ .+++++++++++|++++++.
T Consensus 419 ~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~ 476 (481)
T PTZ00377 419 APDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESF 476 (481)
T ss_pred CcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHH
Confidence 113346778888999999999999853 3569999999 68899999999999998764
No 14
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.8e-51 Score=411.22 Aligned_cols=354 Identities=21% Similarity=0.350 Sum_probs=286.5
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CCCC-c
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK-FDPN-K 111 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~-~ 111 (464)
..++|+|+.++++++ ++.+.+++.+. +.....|++..|.++||++||+++++.+| ++ ++++ +
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~~ 92 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAAN-------------LDGLASYPTTAGLPALREAIAAWLERRYG--LPALDPATQ 92 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHH-------------hhhhcCCCCCCCCHHHHHHHHHHHHHHhC--CCcCCccce
Confidence 457899999999875 46666666553 13456799999999999999999988776 45 6775 8
Q ss_pred EEEeCChHHHHHHHHHHhcCC---CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 112 LVLTAGSTAANETLMFCLADP---GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
|++|+|+++++..++++++++ ||.|++++|+|+.|...+... |++++.+|++++++|.+|++.+++.+.+
T Consensus 93 i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~vp~~~~~~~~~d~~~l~~~~~~------ 165 (396)
T PRK09147 93 VLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLA-GAEPYFLNCDPANNFAPDFDAVPAEVWA------ 165 (396)
T ss_pred EEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhc-CCEEEEeccCccccCccCHHHHHHHHhh------
Confidence 999999999999999999999 899999999999998888776 9999999998777899999999887754
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
++++++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++.. ...+........+ .+..++++++
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~vi~~ 240 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAA-PPLGLLEAAAELG----RDDFKRLVVF 240 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCC-CCchhhhhccccC----ccccccEEEE
Confidence 7899999999999999999999999999999999999999999998776420 1112211111110 0124799999
Q ss_pred cCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
+||||.||++|+|+||+++++ .+.+.+.+... .+.++++.|.++.+.+.+. +++++.++.++++++.+.+.|.
T Consensus 241 ~S~SK~~~~~GlRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~L~ 315 (396)
T PRK09147 241 HSLSKRSNVPGLRSGFVAGDA-ALLKKFLLYRTYHGCAMPPAVQAASIAAWNDE----AHVRENRALYREKFDAVTPILA 315 (396)
T ss_pred eccccccCCccceeeeecCCH-HHHHHHHHHhhhcccCCCHHHHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999965 45454544433 2457888999888877653 4578889999999999999998
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeecCCHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFANITEETLQV 420 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~~~~e~l~~ 420 (464)
+. +.+..|++|+|+|++++. ...+++..+++++||.|.||..|+. ...+++||+++. +++++++
T Consensus 316 ~~-~~~~~p~~g~f~~~~~~~--------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~ 385 (396)
T PRK09147 316 PV-LDVQLPDAGFYLWAKVPG--------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVE 385 (396)
T ss_pred Hh-cCCCCCCeeEEEEEECCC--------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHH
Confidence 75 666678899999999971 1235778888788999999998863 235799999996 7899999
Q ss_pred HHHHHHHHHH
Q 037587 421 ALQRIKVFAQ 430 (464)
Q Consensus 421 ~l~~l~~~l~ 430 (464)
++++|+++++
T Consensus 386 ~l~rl~~~~~ 395 (396)
T PRK09147 386 AAERIVDFCR 395 (396)
T ss_pred HHHHHHHHhc
Confidence 9999999874
No 15
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.4e-51 Score=415.41 Aligned_cols=364 Identities=21% Similarity=0.348 Sum_probs=290.2
Q ss_pred CCceEEeecccccc-----cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 35 PSGIIQMGLAENQL-----SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 35 ~~~~i~l~~~~n~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
..++|+|+.+.+.+ +++.+.+.+.+.... .....|++..|.++||++||+++++.++ ..+++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lR~aiA~~~~~~~~--~~~~~ 131 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRS-----------GKGNSYGPGAGILPARRAVADYMNRDLP--HKLTP 131 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCChHHHHHHHHHHHHHhcC--CCCCc
Confidence 56799999997652 223445544442110 2345798888999999999999998765 45789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|++++|..++.++++|||.|++++|+|+.|...+... |++++.+++.++++|.+|++.|++.+.+ +
T Consensus 132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~l~~~~~~~~d~~~l~~~~~~------~ 204 (462)
T PLN02187 132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYS-GLEVRKFDLLPEKEWEIDLEGIEAIADE------N 204 (462)
T ss_pred ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEeCccccCCccCHHHHHHhcCC------C
Confidence 99999999999999999999999999999999999998887776 9999999987667899999999987754 7
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+. .+.++..+.. ..++++++
T Consensus 205 ~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~~----------~~~vi~l~ 272 (462)
T PLN02187 205 TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFAS----------IVPVLTLA 272 (462)
T ss_pred cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhcc----------CCcEEEEe
Confidence 78999999999999999999999999999999999999999999888654 4445544421 24699999
Q ss_pred CCCcCCCCCccEEEEEEecC-HHH---HHHHHHhcccC----CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNN-ERV---VSAATKMSSFG----LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEML 341 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~-~~~---~~~~~~~~~~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 341 (464)
||||+|++||+|+||+++++ +.+ .+.+......+ .++.+.|.++.+++.+.. .+++++.++.++++++.+
T Consensus 273 SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~--~~~l~~~~~~l~~~r~~l 350 (462)
T PLN02187 273 GISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKAD--KNFFAKKNKILKHNVDLV 350 (462)
T ss_pred cchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999843 322 23333333332 247899999999997532 467899999999999999
Q ss_pred HHHHHhCCC-e-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHH
Q 037587 342 VSGLKVAGI-R-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQ 419 (464)
Q Consensus 342 ~~~l~~~g~-~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 419 (464)
.+.|++++. . +..|++|+|+|++++..... ...++.+++..++.++||.|+||..|+ .++||||+++. +++.++
T Consensus 351 ~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg--~~~~iRis~~~-~~e~l~ 426 (462)
T PLN02187 351 CDRLKDIPCVVCPKKPESCTYLLTKLELSLMD-NIKDDIDFCVKLAREENLVFLPGDALG--LKNWMRITIGV-EAHMLE 426 (462)
T ss_pred HHHHhhCCCCcCCCCCCEeEEEEeecChhhCC-CCCCHHHHHHHHHhhCCEEEECccccC--CCCeEEEEeCC-CHHHHH
Confidence 999998743 2 23678889999988632111 111233577788889999999999996 47899999995 789999
Q ss_pred HHHHHHHHHHHhhCccc
Q 037587 420 VALQRIKVFAQSCNPQM 436 (464)
Q Consensus 420 ~~l~~l~~~l~~~~~~~ 436 (464)
+++++|.++++++....
T Consensus 427 ~al~rL~~~l~~~~~~~ 443 (462)
T PLN02187 427 DALERLKGFCTRHAKKT 443 (462)
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 99999999998777433
No 16
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.5e-51 Score=410.40 Aligned_cols=352 Identities=24% Similarity=0.414 Sum_probs=292.0
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+... .....|++..|.++||+++++++++.++ +.++++ +|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~Lr~aia~~~~~~~g--~~~~~~~~I~ 119 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIR------------DGKNQYARGFGVPELNSAIAERFKKDTG--LVVDPEKEVT 119 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 47899999988775 4566666655311 1246799999999999999999998766 457787 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.++++++ +|.+|++.+++.+.. ++++|
T Consensus 120 vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~-~~~~~~~~l~~~~~~------~~k~i 191 (413)
T PLN00175 120 VTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA-GAKIKTVTLRPP-DFAVPEDELKAAFTS------KTRAI 191 (413)
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEECCcc-cCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999888877 999999999754 388999999988754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|++++++||+||+|.++.|.+. +.++.++.. ..+++++++||||
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~---~~s~~~~~~---------~~~~vi~i~SfSK 259 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD---HISMASLPG---------MYERTVTMNSLGK 259 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc---ccChhhCCC---------CcCcEEEEecchh
Confidence 9999999999999999999999999999999999999999877543 234444422 2478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+.... ..++++.+.|.++..+|++. +.++++.++.++++++.+.+.|++.|+.
T Consensus 260 ~~~~~G~RiG~~v~~~~-l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 335 (413)
T PLN00175 260 TFSLTGWKIGWAIAPPH-LTWGVRQAHSFLTFATATPMQWAAVAALRAP---ESYYEELKRDYSAKKDILVEGLKEVGFK 335 (413)
T ss_pred hccCcchheeeeEeCHH-HHHHHHHHHhhccCCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 99999999999999654 444444443 23467889999999999875 3468889999999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC---CCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC---NEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~---~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
+.+++||+|+|++++... .....+++..+++++||.+.||+.|+. .+.+++||+++. +++++++++++|+++
T Consensus 336 ~~~p~g~~f~~~~~~~~~----~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~ 410 (413)
T PLN00175 336 VYPSSGTYFVMVDHTPFG----FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTK 410 (413)
T ss_pred ecCCCeeEEEEEeccccC----CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHH
Confidence 999999999999985311 112346888888888999999999864 235799999995 899999999999998
Q ss_pred HH
Q 037587 429 AQ 430 (464)
Q Consensus 429 l~ 430 (464)
++
T Consensus 411 ~~ 412 (413)
T PLN00175 411 LK 412 (413)
T ss_pred Hh
Confidence 76
No 17
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=3.6e-51 Score=422.30 Aligned_cols=361 Identities=19% Similarity=0.330 Sum_probs=286.6
Q ss_pred CCceEEeecccc-c--c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN-Q--L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
..++|+|+.+++ + + +++.+.+++.+. +.....|++..|..+||++||+++.+..+ ..++++
T Consensus 145 g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lReaia~~~~~~~~--~~~~~~ 209 (517)
T PRK13355 145 GTHILKLNIGNPAPFGFRTPDEVVYDMAQQ-------------LTDTEGYSDSKGLFSARKAIMQYAQLKGL--PNVDVD 209 (517)
T ss_pred CCCeEEecCcCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCcChHHHHHHHHHHHHhcCC--CCCChh
Confidence 357899999543 3 3 133344443332 12345799999999999999999976543 347899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++.+++.+++++||.|++++|+|+.|...+... |++++.++++++++|.+|++++++.+.. ++
T Consensus 210 ~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 282 (517)
T PRK13355 210 DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLA-GGTAVHYRCDEQSEWYPDIDDIRSKITS------RT 282 (517)
T ss_pred HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHC-CCEEEEeecCcccCCCCCHHHHHHhcCc------Cc
Confidence 9999999999999999999999999999999999999888876 9999999998877899999999998754 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|+++|||||||.++|.+++++|+++|++|+++||+||+|.++.|++. .+.++..+.+ ...+++++|
T Consensus 283 k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~~----------~~~vi~~~S 350 (517)
T PRK13355 283 KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLAP----------DLFCVTFSG 350 (517)
T ss_pred eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhCC----------CCeEEEEec
Confidence 9999999999999999999999999999999999999999999888754 4456655532 135778899
Q ss_pred CCcCCCCCccEEEEEEec-CHH----HHHHHHHhcc-cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSN-NER----VVSAATKMSS-FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~-~~~----~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
|||.|+++|+|+||++++ +.. +.+.+..... ...++.++|.++..+|.+.....+++.+.++. .++++.+.+.
T Consensus 351 ~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~-~~~r~~l~~~ 429 (517)
T PRK13355 351 LSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRV-YEQRELVYNA 429 (517)
T ss_pred chhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999963 222 2222332222 24477899999999997643335566665444 4567999999
Q ss_pred HHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 037587 345 LKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 345 l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
|.++ |+.+.+|+||||+|++++..... ..++.+++..++.++||.|+||+.|+...++||||+++ .++++++++++
T Consensus 430 L~~~~g~~~~~p~g~fy~~~~l~~~~~~--~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~ 506 (517)
T PRK13355 430 LNAIPGISAVKPKAAFYIFPKIDVKKFN--IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMD 506 (517)
T ss_pred HhcCCCcccCCCCeeeEEEeecCcccCC--CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHH
Confidence 9988 89999999999999998742100 11233577788889999999999998666889999997 58999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++++
T Consensus 507 rl~~~~~~~~ 516 (517)
T PRK13355 507 RLADFFSYYR 516 (517)
T ss_pred HHHHHHHHhh
Confidence 9999998654
No 18
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=3.8e-51 Score=408.68 Aligned_cols=350 Identities=26% Similarity=0.405 Sum_probs=287.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++++|+.|.+.++ ++.+.+++.+.... ....+|+++.|.++||+++|+++++.++ ++++++ +|+
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~~vi 95 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAEN-----------PENHRYPSYEGMLAYRQAVADWYKRRFG--VELDPETEVL 95 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCeEE
Confidence 47799999998875 45566665543211 2346899999999999999999997766 445666 699
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++.+++|.+|++++++.+.. ++++|
T Consensus 96 ~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-G~~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v 168 (383)
T TIGR03540 96 SLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFA-GGEPYEMPLKEENGFLPDFDAIPEDIAK------KAKLM 168 (383)
T ss_pred ECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhc-CCEEEEEecCcccCCccCHHHHHhhccc------cceEE
Confidence 9999999999999999999999999999999998888776 9999999998766788999999888754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|++++++||+||+|.++.|.+. ...++..+.. ..+++++++||||
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~---------~~~~~i~~~SfSK 237 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDG---------AKDVGIEFHSLSK 237 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCC---------cccCEEEEEeccc
Confidence 9999999999999999999999999999999999999999877554 3344443311 2367899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||+++++ .+.+.+...... ..++.+.|.++..++.+. .++++++++.++++++.+.+.|++.|+.
T Consensus 238 ~~g~~GlRiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 313 (383)
T TIGR03540 238 TYNMTGWRIGMAVGNA-DLIAGLGKVKTNVDSGVFQAIQYAAIAALNGP---QDVVKEIRKIYQRRRDLLLEALKKIGID 313 (383)
T ss_pred ccCCccceeeEEeCCH-HHHHHHHHHHHhcccCCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 9999999999999854 455545444322 346778999999999874 4568888999999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.++++|+|+|++++...+ ..+++..+++++||.|+||..|+...++++||+++. +++++.+++++|++
T Consensus 314 ~~~~~~~~~~~~~l~~~~~------~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 314 VEKPKATFYVWVPVPEGYT------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred ecCCCcceEEEEECCCCCC------HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999999999985322 235788888788999999999976557899999984 78899999988865
No 19
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-51 Score=408.63 Aligned_cols=351 Identities=24% Similarity=0.386 Sum_probs=287.2
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
..++|+|+.++++++ ++.+.+++.+.... .....|+++.|.++||+++++++++.+| ..++++ +|
T Consensus 30 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i 96 (385)
T PRK09276 30 GVDVISLGIGDPDLPTPDHIIEAMCKAVED-----------PENHQYPSYEGMLEFRKAVADWYKRRFG--VELDPETEV 96 (385)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 346899999998875 45666666553210 2346799999999999999999998766 446776 59
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++++.+++|.+|++++++.+.. ++++
T Consensus 97 i~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~ 169 (385)
T PRK09276 97 ISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFA-GGEPYFMPLKEENGFLPDLDAIPEDVAK------KAKL 169 (385)
T ss_pred EEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHc-CCEEEEEecCCCCCCcCCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999998888776 9999999997666788999999887654 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. ...++..+.. ..+++++++|||
T Consensus 170 v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~S 238 (385)
T PRK09276 170 MFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPG---------AKDVGIEFHSLS 238 (385)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCC---------CcCCEEEEecch
Confidence 99999999999999999999999999999999999999998877644 3344444311 236789999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||++|+|+||+++++ .+.+.+.+.... ..++.+.|.++..++.+. .+++++.++.++++++.+.+.|++.|+
T Consensus 239 K~~g~~GlRiG~~i~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 314 (385)
T PRK09276 239 KTYNMTGWRIGFAVGNA-DLIAGLGKVKSNVDSGVFQAIQEAGIAALNGP---QEVVEELRKIYQERRDILVEGLRKLGL 314 (385)
T ss_pred hhcCCcchhheeeeCCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHcCc---HHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999854 455555444332 235668899998888752 456888899999999999999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++.++++|+|+|++++...+ ..+++.++++++||.|+||..|+...++++||+++. +++++.+++++|++
T Consensus 315 ~~~~~~~~~~~~v~~~~~~~------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 315 EVEPPKATFYVWAPVPKGYT------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred cccCCCcceEEEEECCCCCC------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 88888999999999985422 235778888778999999999976557899999984 88899999998864
No 20
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-50 Score=407.46 Aligned_cols=363 Identities=21% Similarity=0.356 Sum_probs=287.3
Q ss_pred CCCCceEEeeccccc----c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 33 HNPSGIIQMGLAENQ----L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
....++|+|+++.+. + +++.+.+++.+.... .....|++..|.++||++||+++++.+| +++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~ 95 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRS-----------AKFNSYAPTGGILPARRAIADYLSNDLP--YQL 95 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCC
Confidence 345678999999886 4 456676766553211 2345798888999999999999988765 457
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
++++|++|+|+++++.+++.+++++||.|++++|+|+.|...+... |++++.++++++++|.+|+++|++++..
T Consensus 96 ~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~----- 169 (409)
T PLN00143 96 SPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFH-HLEIRHFDLLPEKGWEVDLDAVEAIADE----- 169 (409)
T ss_pred CHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHc-CCEEEEEeccCCCCCcCCHHHHHHhccc-----
Confidence 8999999999999999999999999999999999999998888876 9999999987666899999999887754
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++++++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. .+.++..+ . ..+++++
T Consensus 170 -~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~--~~~~~~~~-~---------~~~~vi~ 236 (409)
T PLN00143 170 -NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSK--PFVPMGLF-A---------SIVPVIT 236 (409)
T ss_pred -CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCC--CCcchhhh-c---------ccCcEEE
Confidence 678899999999999999999999999999999999999999999877654 33333333 2 2258999
Q ss_pred EcCCCcCCCCCccEEEEEEec-CHHH------HHHHHHhcc-cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSN-NERV------VSAATKMSS-FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKE 339 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~-~~~~------~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (464)
++||||.|++||+|+||++++ ++.+ .+.+.+... ....+.++|.++..++.+.. ..++++.++.++++++
T Consensus 237 ~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~~~ 314 (409)
T PLN00143 237 LGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTT--EDFFSKTINILRAALA 314 (409)
T ss_pred EccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcCh--HHHHHHHHHHHHHHHH
Confidence 999999999999999999984 3322 222232222 22257799999999997632 3457777888888888
Q ss_pred HHHHHHHhCCC-e-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHH
Q 037587 340 MLVSGLKVAGI-R-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEET 417 (464)
Q Consensus 340 ~l~~~l~~~g~-~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~ 417 (464)
.+.+.|.+++. . +.+|++|+|+|++++.... .......+++..++.++||.|.||..|+ .++|+||+++. ++++
T Consensus 315 ~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~-~~~~~~~~~~~~ll~~~gV~v~pg~~f~--~~~~iRi~~~~-~~~~ 390 (409)
T PLN00143 315 FCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL-EDIEDDMEFCLKLAKEESLIILPGVTVG--LKNWLRITFAV-EQSS 390 (409)
T ss_pred HHHHHHhcCCCCCCCCCCCeeEEEEEecchhhc-CCCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEEcC-CHHH
Confidence 89999988743 2 2367899999999975211 0111234577778788999999999996 46899999994 7999
Q ss_pred HHHHHHHHHHHHHhhC
Q 037587 418 LQVALQRIKVFAQSCN 433 (464)
Q Consensus 418 l~~~l~~l~~~l~~~~ 433 (464)
+++++++|+++++++.
T Consensus 391 l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 391 LEDGLGRLKSFCGRHA 406 (409)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998654
No 21
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-51 Score=407.79 Aligned_cols=362 Identities=22% Similarity=0.315 Sum_probs=290.6
Q ss_pred CCCCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-
Q 037587 29 YDQLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK- 106 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~- 106 (464)
+.....+.++|+|+.|+|++. ++.+.+.+.+.... .....|++ .|.++||+++|+++++.+| +.
T Consensus 37 ~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~-----------~~~~~Y~~-~G~~~lr~aia~~~~~~~g--~~~ 102 (410)
T PRK06290 37 AKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKK-----------PENRGYAD-NGIQEFKEAAARYMEKVFG--VKD 102 (410)
T ss_pred HhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCC-CCcHHHHHHHHHHHHHHcC--CCc
Confidence 333334557899999999885 45566655542110 12456875 7999999999999988765 44
Q ss_pred CCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 107 FDPN-KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 107 ~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++++ +|++|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++++++++|.+|++.+++.+.+
T Consensus 103 ~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~--- 178 (410)
T PRK06290 103 IDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYY-GGEVYNLPLLEENNFLPDLDSIPKDIKE--- 178 (410)
T ss_pred CCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHc-CCEEEEEecCCCcCCcCCHHHHHHhhcc---
Confidence 6776 7999999999999999999999999999999999998888877 9999999998777888999999988754
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. +.++.++.. ..+++
T Consensus 179 ---~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~---~~s~~~~~~---------~~~~~ 243 (410)
T PRK06290 179 ---KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK---PLSFLSVPG---------AKEVG 243 (410)
T ss_pred ---cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC---CcChhcCCC---------ccccE
Confidence 789999999999999999999999999999999999999999999877543 234443321 23678
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
++++||||.||++|+|+||+++++ .+.+.+......+ +++.++|.++..++.+.++ +++.++.++++++.+.+
T Consensus 244 I~i~SfSK~~g~~GlRiG~ii~~~-~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~~~~l~~ 318 (410)
T PRK06290 244 VEIHSLSKAYNMTGWRLAFVVGNE-LIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEI----TEKIREKYSRRLDKLVK 318 (410)
T ss_pred EEEeechhhcCCchhheEeEEeCH-HHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHH----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999954 4555555444332 3456899999999988654 67788889999999999
Q ss_pred HHHhCCCeeecCCccEEEEEecCcccccC-ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHH
Q 037587 344 GLKVAGIRCLKSNAGLFCWVDMRHLLVSN-TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQV 420 (464)
Q Consensus 344 ~l~~~g~~~~~~~~g~f~~~~l~~~~~~~-~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~ 420 (464)
.|++.|+.+.++++|+|+|++++...... ......+++..|+++.+|.+.||+.|+ +|+||+++. .++|+.++
T Consensus 319 ~L~~~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~----~~lRi~~~~~~~~~~~~~~ 394 (410)
T PRK06290 319 ILNEVGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG----HFLRFSVTFEAKDEEEEDR 394 (410)
T ss_pred HHHhCCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcccc----CeEEEEEEcccccccchhH
Confidence 99999999999999999999998643210 001344688889877778888988663 699999985 36799999
Q ss_pred HHHHHHHHHHhh
Q 037587 421 ALQRIKVFAQSC 432 (464)
Q Consensus 421 ~l~~l~~~l~~~ 432 (464)
++++|++.+...
T Consensus 395 ~~~~l~~~~~~~ 406 (410)
T PRK06290 395 ILEEIKRRLSDV 406 (410)
T ss_pred HHHHHHHHHhhc
Confidence 999999988764
No 22
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=1.2e-50 Score=408.20 Aligned_cols=365 Identities=21% Similarity=0.380 Sum_probs=296.2
Q ss_pred CCCCceEEeeccccc-----ccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC----C
Q 037587 33 HNPSGIIQMGLAENQ-----LSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG----N 103 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~----~ 103 (464)
.+..++|+|+.+.+. .+++.+.+++.+.... .....|+++.|.++||++||+++++.++ .
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~ 98 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDS-----------QECNGYPPTVGSPEAREAVATYWRNSFVHKESL 98 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhc-----------CCCCCCCCCCCcHHHHHHHHHHHHhhccccccc
Confidence 456789999999765 3566677766653211 2356899999999999999999987543 1
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+..+++++|++|+|+++++.+++.+++++||.|+++.|+|..+...++.. |++++.++++++++|.+|++.+++.+.+
T Consensus 99 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~- 176 (412)
T PTZ00433 99 KSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAY-GIEMRFYNCRPEKDWEADLDEIRRLVDD- 176 (412)
T ss_pred cCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHc-CCEEEEEecCccccCcCCHHHHHHHhcc-
Confidence 34578999999999999999999999999999999999999999888877 9999999998767789999999887754
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.|.+. .+.++..+.. ..
T Consensus 177 -----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~----------~~ 239 (412)
T PTZ00433 177 -----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGA--TFTSVADFDT----------TV 239 (412)
T ss_pred -----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCC--CccchhhccC----------CC
Confidence 789999999999999999999999999999999999999999998877654 3345444421 23
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEe--c---CHHHHHHHHHhcc-cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYS--N---NERVVSAATKMSS-FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKR 337 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~--~---~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (464)
++++++||||.||+||+|+||+++ + .+.+.+.+.+... .+.++++.|.++..++.+. . ..++++.++.++++
T Consensus 240 ~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~~~~~~~~~~~~ 317 (412)
T PTZ00433 240 PRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNT-P-QEHLEQIVAKLEEG 317 (412)
T ss_pred ceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcC-c-HHHHHHHHHHHHHH
Confidence 588999999999999999999997 2 1334444444433 3468899999999998763 2 56788899999999
Q ss_pred HHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHH
Q 037587 338 KEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEE 416 (464)
Q Consensus 338 ~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e 416 (464)
++.+.+.|++. |+.+.++++|+|+|++++...-. ......+++..+++++||.|+||+.|+. ++++||+++. .++
T Consensus 318 r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e 393 (412)
T PTZ00433 318 AMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFR-DIKSDVEFYEKLLEEENVQVLPGEIFHM--PGFTRLTISR-PVE 393 (412)
T ss_pred HHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcC-CCCCHHHHHHHHHHhcCEEEeCccccCC--CCeEEEEecC-CHH
Confidence 99999999885 78888899999999998742100 0112346788888778999999999964 6899999995 688
Q ss_pred HHHHHHHHHHHHHHhhC
Q 037587 417 TLQVALQRIKVFAQSCN 433 (464)
Q Consensus 417 ~l~~~l~~l~~~l~~~~ 433 (464)
++++++++|.+++++++
T Consensus 394 ~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 394 VLREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998765
No 23
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.6e-51 Score=406.80 Aligned_cols=355 Identities=22% Similarity=0.421 Sum_probs=291.6
Q ss_pred CceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+++++++ +.+.+++..... .....|++..|.++||+++|+++++.+| +.++++ +|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 85 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLE------------QGYTSYTANAGLLELRQEIAKYLKKRFA--VSYDPNDEII 85 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 478999999998853 444555444211 1246798888999999999999998776 446675 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++.+++++||.|++++|+|+.+...+... |.+++.++++.+++|.+|++++++++.+ +++++
T Consensus 86 ~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 158 (378)
T PRK07682 86 VTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLA-GGVPVPVATTLENEFKVQPAQIEAAITA------KTKAI 158 (378)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCCCCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999998888776 9999999987666789999999998754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++++++|+||+|.++.|++. +.++..+.. ..+++++++||||
T Consensus 159 ~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~---------~~~~~i~~~S~SK 226 (378)
T PRK07682 159 LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA---YTSFASIKG---------MRERTILISGFSK 226 (378)
T ss_pred EEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC---CCChhhccc---------ccCCEEEEecCcc
Confidence 9999999999999999999999999999999999999999877543 234333321 2368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+..... .+.++.+.|.++..+|++.. .++++.++.++++++.+.+.|+++|+.
T Consensus 227 ~~~~~GlR~G~~~~~~~-~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~L~~~~~~ 302 (378)
T PRK07682 227 GFAMTGWRLGFIAAPVY-FSEAMLKIHQYSMMCAPTMAQFAALEALRAGN---DDVIRMRDSYRKRRNFFVTSFNEIGLT 302 (378)
T ss_pred cccChhhhhhhhhcCHH-HHHHHHHHHHhhccCCCHHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 99999999999999554 5555543332 34578899999999998753 347788889999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.+|++|+|+|++++... ....+++..+++++||.|+||..|+...++++||+++. +++++++++++|++++++
T Consensus 303 ~~~p~g~~~~~~~~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 303 CHVPGGAFYAFPSISSTG-----LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred cCCCCeeEEEEEeccCCC-----CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhh
Confidence 888999999999885311 01235778887788999999999976567899999996 789999999999999876
Q ss_pred hC
Q 037587 432 CN 433 (464)
Q Consensus 432 ~~ 433 (464)
.+
T Consensus 377 ~~ 378 (378)
T PRK07682 377 KK 378 (378)
T ss_pred cC
Confidence 53
No 24
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-50 Score=404.88 Aligned_cols=348 Identities=20% Similarity=0.381 Sum_probs=286.8
Q ss_pred CceEEeecccccccH-HHHHH-HHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAENQLSF-DLLES-WLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+++|+|+.+++++++ +.+.+ ++... ......|++..|.++||++||+++++.++ +.+++++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~~i~ 93 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDA-------------KKGHTRYTDSGGDVELIEEIIKYYSKNYD--LSFKRNEIM 93 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHH-------------hcCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 467999999988754 33333 32221 12456899999999999999999987766 457899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+++.++++|.+|++.+++.+++ ++++|
T Consensus 94 it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v 166 (384)
T PRK06348 94 ATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMV-GGKPIILETYEEDGFQINVKKLEALITS------KTKAI 166 (384)
T ss_pred EcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEecCCcCcCCcCCHHHHHHhhCc------CccEE
Confidence 9999999999999999999999999999999999998877 9999999886556788999999988754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|++++++||+||+|.++.|+.. +.++..+.. ..+++++++||||
T Consensus 167 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~---------~~~~vi~~~SfSK 234 (384)
T PRK06348 167 ILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED---FVPMATLAG---------MPERTITFGSFSK 234 (384)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC---ccchhhcCC---------CcCcEEEEecchh
Confidence 9999999999999999999999999999999999999999877543 234333321 2478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
+||+||+|+||+++++ .+.+.+..... .++++++.|.++..++.+. ++++++.++.++++++.+.+.|++. ++
T Consensus 235 ~~~l~GlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~r~~~~~~~L~~~~~~ 310 (384)
T PRK06348 235 DFAMTGWRIGYVIAPD-YIIETAKIINEGICFSAPTISQRAAIYALKHR---DTIVPLIKEEFQKRLEYAYKRIESIPNL 310 (384)
T ss_pred ccCCccccceeeecCH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999999954 45555554432 3457889999999998753 4567888899999999999999887 77
Q ss_pred eeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
.+.++++|+|+|++++.. .+ ..+++..+++++||.|.||+.|+..+++++||+++ .+++++++++++|+++
T Consensus 311 ~~~~p~gg~~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 311 SLHPPKGSIYAFINIKKTGLS------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT-VGIEVLEEAFNRIEKM 382 (384)
T ss_pred eeccCCeeEEEEEecccCCCC------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec-CCHHHHHHHHHHHHhh
Confidence 888999999999999742 21 23577888778899999999998655789999998 4899999999999764
No 25
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.8e-50 Score=406.29 Aligned_cols=366 Identities=22% Similarity=0.375 Sum_probs=295.0
Q ss_pred CCCCCCceEEeeccccc----c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCC
Q 037587 31 QLHNPSGIIQMGLAENQ----L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKV 105 (464)
Q Consensus 31 ~~~~~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~ 105 (464)
...++.++|+|+++++. + +++.+.+++..... ......|++..|.++||+++++++++.++ +
T Consensus 26 ~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~ 92 (409)
T PLN02656 26 DEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQ-----------SNKFNGYAPTVGLPQARRAIAEYLSRDLP--Y 92 (409)
T ss_pred ccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHh-----------cCCCCCCCCCCCCHHHHHHHHHHHHHhcC--C
Confidence 44567899999999886 3 35666666555321 02356898889999999999999998765 4
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 106 KFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 106 ~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
.+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++++++|.+|++.+++.+.+
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~i~~~~~~~~~~d~~~l~~~~~~--- 168 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFR-HLEVRYVDLLPEKGWEVDLDAVEALADQ--- 168 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHc-CCEEEEEeCCCcCCCCCCHHHHHHHhcc---
Confidence 578999999999999999999999999999999999999888777766 9999999987666789999999987754
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++++++|||||||.++|.+++++|+++|++++++||+||+|.++.|++. .+.++..+ . ...++
T Consensus 169 ---~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~---------~~~~v 233 (409)
T PLN02656 169 ---NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-G---------SIVPV 233 (409)
T ss_pred ---CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-c---------ccCcE
Confidence 678999999999999999999999999999999999999999999888654 33444333 1 23689
Q ss_pred EEEcCCCcCCCCCccEEEEEEecC-------HHHHHHHHHhcc-cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNN-------ERVVSAATKMSS-FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKR 337 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~-------~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (464)
++++||||.|++||+|+||+++++ +.+.+.+.+... ...++.+.|.++..++++.. ++++++.++.++++
T Consensus 234 i~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~~~ 311 (409)
T PLN02656 234 LTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTD--ESFFKKTINILKQS 311 (409)
T ss_pred EEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCc--HHHHHHHHHHHHHH
Confidence 999999999999999999999852 345555554433 33578899999999997532 45688889999999
Q ss_pred HHHHHHHHHhCC-Ce-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCH
Q 037587 338 KEMLVSGLKVAG-IR-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITE 415 (464)
Q Consensus 338 ~~~l~~~l~~~g-~~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~ 415 (464)
++.+.+.|++++ +. +.+|+||+|+|++++..... ......+++..++.++||.|.||+.|+ .++|+||+++. ++
T Consensus 312 r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~-~~~~~~~~~~~~l~~~gV~v~pg~~fg--~~~~iRi~~~~-~~ 387 (409)
T PLN02656 312 SDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLE-DISDDIDFCFKLAREESVIILPGTAVG--LKNWLRITFAA-DP 387 (409)
T ss_pred HHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcC-CCCCHHHHHHHHHHhCCEEEecchhcC--CCCeEEEEeCC-CH
Confidence 999999999873 33 35789999999999742110 001123466677788999999999996 36899999995 89
Q ss_pred HHHHHHHHHHHHHHHhhCc
Q 037587 416 ETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 416 e~l~~~l~~l~~~l~~~~~ 434 (464)
+++++++++|++++.++.+
T Consensus 388 e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 388 SSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999999987664
No 26
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.7e-50 Score=405.13 Aligned_cols=354 Identities=21% Similarity=0.361 Sum_probs=284.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
..++|+|+.|+++++ ++.+.+++... ......|+++.|.++||+++|+++++.++....++++ +|
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i 93 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALREN-------------LHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHV 93 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHH-------------hhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceE
Confidence 357799999999885 46677776653 1345689999999999999999998876643226775 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCe--EEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 113 VLTAGSTAANETLMFCLADPGDA--FLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~--Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
++|+|+++++..++.+++++||. |++++|+|+.|...+... |++++.++++++++|.+|++++++.+.+ ++
T Consensus 94 ~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~ 166 (393)
T TIGR03538 94 LPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLA-GAEPYFLNCTAENGFLPDFDAVPESVWR------RC 166 (393)
T ss_pred EECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhc-CCeEEEeeccccCCCCCCHHHHHHHHhh------cc
Confidence 99999999999999999999986 999999999998888766 9999999998777899999999988765 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.+.+.. ...+........+ .+..+++++++|
T Consensus 167 k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~vi~i~S 241 (393)
T TIGR03538 167 QLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGN-PPAGLLQAAAQLG----RDDFRRCLVFHS 241 (393)
T ss_pred eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCC-CCcCHHHhccccc----ccccccEEEEec
Confidence 99999999999999999999999999999999999999999987765310 1223222211110 013478999999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|||.|+++|+|+||++++++ +.+.+.+... .+.++++.|.++...+.+. +++++.++.++++++.+.+.|++.
T Consensus 242 ~SK~~~~~GlRvG~~i~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGDAE-ILKAFLRYRTYHGCAMPIPTQLASIAAWNDE----QHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred chhhcCCcccceEEEecCHH-HHHHHHHHHHhhccCcCHHHHHHHHHHhcCh----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999654 4444444433 2357788999988888653 457888899999999999999875
Q ss_pred CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeecCCHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFANITEETLQVAL 422 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~~~~e~l~~~l 422 (464)
+.+..+++|+|+|++++. +..+++..+++++||.|.||+.|+. .+.+++||+++. +++++++++
T Consensus 317 -~~~~~p~gg~f~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l 386 (393)
T TIGR03538 317 -LDLELPDAGFYLWPKVPG--------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAA 386 (393)
T ss_pred -CcccCCCeeEEEEEECCC--------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHH
Confidence 556678999999999981 1235778888788999999998862 235799999986 789999999
Q ss_pred HHHHHH
Q 037587 423 QRIKVF 428 (464)
Q Consensus 423 ~~l~~~ 428 (464)
++|+++
T Consensus 387 ~~l~~~ 392 (393)
T TIGR03538 387 ERIRSF 392 (393)
T ss_pred HHHHHh
Confidence 999875
No 27
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3e-50 Score=405.94 Aligned_cols=362 Identities=21% Similarity=0.379 Sum_probs=292.3
Q ss_pred CCceEEeeccccc----cc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 35 PSGIIQMGLAENQ----LS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 35 ~~~~i~l~~~~n~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
..++|+|+.+++. ++ ++.+.+++.+... ......|++..|.+++|+++|+++++.++ .++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 117 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALR-----------SGKYNSYSTCVGLLPARRAIAEYLSRDLP--YELST 117 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHH-----------cCcCCCCCCCccCHHHHHHHHHHHhhccC--CCCCh
Confidence 4579999999764 32 3555565554311 02345799989999999999999987665 45789
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|++++|.+++.+++++||+|++++|+|+.|...+... |++++.+++.++++|.+|++.+++.+.. +
T Consensus 118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 190 (430)
T PLN00145 118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFS-GLEVRHFDLLPERGWEVDLEGVEALADE------N 190 (430)
T ss_pred hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeeCCcccCCcCCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999998877766 9999999987777899999999987754 7
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|++. .+.++..+. ...++++++
T Consensus 191 ~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~--~~~~~~~~~----------~~~~vi~~~ 258 (430)
T PLN00145 191 TVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK--PFVPMGVFG----------EVAPVLTLG 258 (430)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC--Cccchhhhc----------ccCcEEEEe
Confidence 89999999999999999999999999999999999999999999888654 444544431 236899999
Q ss_pred CCCcCCCCCccEEEEEEec-CHHHH------HHHHHhcccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSN-NERVV------SAATKMSSFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEML 341 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~-~~~~~------~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 341 (464)
||||.|++||||+||++++ ++.+. ..++.....+ .++++.|.++..+|++.. +++++++++.++++++.+
T Consensus 259 S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~--~~~~~~~~~~~~~~~~~~ 336 (430)
T PLN00145 259 SISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTK--EEFFTKTLGLLKETADIC 336 (430)
T ss_pred ccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHH
Confidence 9999999999999999973 33222 2233333333 357799999999998632 567888999999999999
Q ss_pred HHHHHhC-CCee-ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHH
Q 037587 342 VSGLKVA-GIRC-LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQ 419 (464)
Q Consensus 342 ~~~l~~~-g~~~-~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 419 (464)
.+.|+++ |+.+ ..|++++|+|++++..... ...++.+++.++++++||.|.||..|+. ++|+||+++. +++.++
T Consensus 337 ~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~fg~--~~~lRis~~~-~~~~l~ 412 (430)
T PLN00145 337 YEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS-GIKDDMDFCCKLAKEESVVVLPGSALGM--KNWLRITFAI-DPPSLE 412 (430)
T ss_pred HHHHhcCCCCCCCcCCCeeeEEEeccChhhcC-CCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHH
Confidence 9999987 7775 4689999999999742100 1112346888899899999999999974 6899999994 889999
Q ss_pred HHHHHHHHHHHhhCc
Q 037587 420 VALQRIKVFAQSCNP 434 (464)
Q Consensus 420 ~~l~~l~~~l~~~~~ 434 (464)
+++++|++++++++.
T Consensus 413 ~al~rl~~~~~~~~~ 427 (430)
T PLN00145 413 DGLERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999988874
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-50 Score=404.05 Aligned_cols=350 Identities=22% Similarity=0.365 Sum_probs=282.1
Q ss_pred CceEEeecccccccH-H-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 36 SGIIQMGLAENQLSF-D-LLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
.++|+|+.+.+..++ + .+....... . -.....|+++.|.++||+++|+++++.++ ++++++ +|
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~-~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~i 100 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAAL-A-----------DPQNHGYPPFEGTASFRQAITDWYHRRYG--VELDPDSEA 100 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHH-h-----------CCCCccCCCCCCCHHHHHHHHHHHHHHHC--CCcCCCCeE
Confidence 468999987544432 2 233322221 0 02346799999999999999999988766 456787 59
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||+|++++|+|+.+...+... |++++.++++.+++|.+|++++++.+.+ ++++
T Consensus 101 ~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~ 173 (394)
T PRK05942 101 LPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIA-GAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKI 173 (394)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEeecCCccCCccCHHHHHHhccc------cceE
Confidence 99999999999999999999999999999999988877766 9999999998777899999999988754 8899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++|++++++||+||+|.++.+++. ...++.++.. ..+++++++|||
T Consensus 174 i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~SfS 242 (394)
T PRK05942 174 LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPG---------AKDIGVEFHTLS 242 (394)
T ss_pred EEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCC---------ccccEEEEecch
Confidence 99999999999999999999999999999999999999998877543 3334433311 235788999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||++|+|+||++++ +.+.+.+..... .+++++++|.++..+++.. .+++++.++.++++++.+.+.|++.|+
T Consensus 243 K~~~~~GlRiG~i~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~ 318 (394)
T PRK05942 243 KTYNMAGWRVGFVVGN-RHIIQGLRTLKTNLDYGIFSALQKAAETALQLP---DSYLQQVQERYRTRRDFLIQGLGELGW 318 (394)
T ss_pred hccCChhhheeeeecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999985 455555555443 3457788999999999742 557888899999999999999998899
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
.+.++++|+|+|++++.... ..+++.++++++||.|.||+.|+...++|+||+++. +.+.+.+++++|.++
T Consensus 319 ~~~~~~~~~f~~~~~~~~~~------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 319 NIPPTKATMYLWVPCPVGMG------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred eecCCCeeeEEEEECCCCCC------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 88889999999999985322 224667778889999999999976557899999984 678888888888764
No 29
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-50 Score=392.96 Aligned_cols=330 Identities=26% Similarity=0.408 Sum_probs=282.1
Q ss_pred ceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
++++|++||||+++ +.+.+.++.. ...+.+||++ ...+|+++++++++. +++++|+++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~-------------~~~~~rYPd~-~~~~l~~a~a~~~~~-------~~~~~V~~g 81 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAA-------------LDKLNRYPDP-DYRELRAALAEYYGV-------VDPENVLVG 81 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCC-cHHHHHHHHHHHhCC-------CCcceEEEc
Confidence 68999999999975 6666666553 2457899988 569999999999962 578999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
+|++++|..++++++.+||+|+++.|+|+.|...++.. |++++.+++.+ |.+|++.+.+.+.+ ++++|++
T Consensus 82 nGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~-g~~~~~v~~~~---~~~d~~~~~~~~~~------~~~lv~i 151 (356)
T COG0079 82 NGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLA-GAEVVKVPLKE---FRLDLDAILAAIRD------KTKLVFL 151 (356)
T ss_pred CChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhc-CCeEEEecccc---cccCHHHHHHhhhc------CCCEEEE
Confidence 99999999999999999999999999999999998877 99999999873 88999999998875 7899999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
||||||||..++.++++++++.+.+ +.++|+||+|.+ |.+. +...++. .++|+++++||||+|
T Consensus 152 ~nPNNPTG~~~~~~~l~~l~~~~~~-~~~vVvDEAY~e--F~~~-----~~~~l~~---------~~~nlivlRTfSKa~ 214 (356)
T COG0079 152 CNPNNPTGTLLPREELRALLEALPE-GGLVVIDEAYIE--FSPE-----SSLELLK---------YPPNLIVLRTFSKAF 214 (356)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhh--cCCc-----hhhhhcc---------CCCCEEEEEecHHhh
Confidence 9999999999999999999999988 899999999998 5443 2222333 237899999999999
Q ss_pred CCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eec
Q 037587 276 SMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR-CLK 354 (464)
Q Consensus 276 g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~ 354 (464)
|++|+|+||+++ ++.+.+.+++...+|++|.+++.++.+++++.++ +++.++.+...|+++.+.|+.+|+. +++
T Consensus 215 gLAGlRlGy~ia-~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~----~~~~~~~~~~~r~rl~~~l~~~~~~~v~p 289 (356)
T COG0079 215 GLAGLRVGYAIA-NPELIAALNKVRPPFNVSSPALAAAIAALRDADY----LEESVERIREERERLYAALKALGLFGVFP 289 (356)
T ss_pred hcchhceeeccC-CHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHH----HHHHHHHHHHHHHHHHHHHHhCCCCeecC
Confidence 999999999988 6678888999999999999999999999999754 7888888999999999999999855 888
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+++| |++++++.. . ..++.+.|+ ++||.||.+.. ....++|+||+++ +++++++++++|+++++.
T Consensus 290 S~aN-Fvlv~~~~~------~-~~~l~~~L~-~~giivR~~~~-~~~~~~~lRitvg--t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 290 SQAN-FVLVRVPDA------E-AAALAEALL-KKGILVRDCSS-VGLLPGYLRITVG--TPEENDRLLAALREVLKG 354 (356)
T ss_pred CCCc-EEEEECCCc------c-HHHHHHHHH-HCCEEEEeCCC-CCCCCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 8876 999999851 1 123556665 67999999876 4456789999999 688899999999998865
No 30
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.2e-49 Score=408.00 Aligned_cols=378 Identities=20% Similarity=0.332 Sum_probs=291.8
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
+++|+|+.+.+.+|.+.+..+.+..... . -.....|+++.|.++||++||+++.+..| +++++++|++|
T Consensus 129 p~~i~~~~~~~~fp~~~i~~a~~~l~~~-----~----~~~~~~Y~~s~G~~~lReaIA~~~~~r~g--~~~~pe~I~iT 197 (534)
T PLN02231 129 PSLLDKSETHGLFSADAIERAWQILDQI-----P----GRATGAYSHSQGIKGLRDAIAAGIEARDG--FPADPNDIFLT 197 (534)
T ss_pred CccCCCCCccccCCHHHHHHHHHHHHhc-----C----CccccCcCCCCCcHHHHHHHHHHHHhccC--CCCCcccEEEe
Confidence 4667777666666666555544321100 0 02356799999999999999999987765 56889999999
Q ss_pred CChHHHHHHHHHHhcC-CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 116 AGSTAANETLMFCLAD-PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+|+++++..++.+++. +||.|+++.|+|+.|...+... |.++++++++++++|.+|+++|++.+++....+.++++++
T Consensus 198 ~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~-g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~iv 276 (534)
T PLN02231 198 DGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALH-GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALV 276 (534)
T ss_pred CCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHc-CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEE
Confidence 9999999999999984 7999999999999999988877 9999999998777899999999999976544445789999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC-CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS-PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++|||||||.++|.+++++|+++|++++++||+||+|.++.|.+ . .+.++.++..+++. .....++++++||||
T Consensus 277 l~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~--~~~s~~~~~~~~g~---~~~~~~vi~l~S~SK 351 (534)
T PLN02231 277 VINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDK--KFHSFKKVARSMGY---GEKDISLVSFQSVSK 351 (534)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCC--CcccHHHHHhhhcc---ccCCceEEEEeccCc
Confidence 99999999999999999999999999999999999999988853 3 45566655432100 001236999999999
Q ss_pred CC-CCCccEEEEEEec--CHHHHHHHHHhccc-CCCChHHHHHHHHHcCCc-----hhhHHHH---HHHHHHHHHHHHHH
Q 037587 274 DF-SMPGFRVGMIYSN--NERVVSAATKMSSF-GLVSSQTQYLLSRMLSDK-----KFTCNYM---KENRKRLRKRKEML 341 (464)
Q Consensus 274 ~~-g~~GlRiG~l~~~--~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~-----~~~~~~~---~~~~~~~~~~~~~l 341 (464)
.+ |++|+|+||+++. ++.+.+.+.+.... ...+.+.|.++..+++.+ .+ .++. +..++.++++++.+
T Consensus 352 ~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y-~~~~~~~~~i~~~~~~r~~~l 430 (534)
T PLN02231 352 GYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESY-ESYMAEKDGILSSLARRAKTL 430 (534)
T ss_pred ccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchH-HHHHHHHHHHHHHHHHHHHHH
Confidence 76 8999999999863 45566655444433 234567888888888642 33 4444 34578999999999
Q ss_pred HHHHHhC-CCeeecCCccEEEEEec--Cccc-ccC---ChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecC
Q 037587 342 VSGLKVA-GIRCLKSNAGLFCWVDM--RHLL-VSN---TFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANI 413 (464)
Q Consensus 342 ~~~l~~~-g~~~~~~~~g~f~~~~l--~~~~-~~~---~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~ 413 (464)
.+.|+++ |+.+.+|+||||+|+++ +... ... ....+..++.++++++||.|.||+.|+.. +..+||+++. .
T Consensus 431 ~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~-~ 509 (534)
T PLN02231 431 EDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL-P 509 (534)
T ss_pred HHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC-C
Confidence 9999988 89999999999999655 3210 000 00112346778888899999999999853 3457999997 5
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 037587 414 TEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 414 ~~e~l~~~l~~l~~~l~~~ 432 (464)
+++++++++++|++++++.
T Consensus 510 ~~e~l~eal~RL~~~~~~~ 528 (534)
T PLN02231 510 QEDKIPAIVSRLTEFHKSF 528 (534)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 8999999999999987764
No 31
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-50 Score=401.98 Aligned_cols=354 Identities=19% Similarity=0.363 Sum_probs=294.4
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.++++++ ++.+.+++..... .....|.+..|.++||+++|+++++.+| ..+++++|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 98 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALD------------EGWTHYTPNAGIPELREAIAEYYKKFYG--VDVDVDNVIV 98 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcccEEE
Confidence 46899999999885 4556666555311 2245688888999999999999987766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||.|++++|+|..+...+... |++++.++++.+++|.+|++.+++.+.+ ++++++
T Consensus 99 t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~ 171 (391)
T PRK08361 99 TAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIA-EAKPIRIPLREENEFQPDPDELLELITK------RTRMIV 171 (391)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------ccEEEE
Confidence 999999999999999999999999999999999888776 9999999998777789999999998865 788999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. ...++..+ ..+++++++||||.
T Consensus 172 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-----------~~~~~i~~~s~SK~ 238 (391)
T PRK08361 172 INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY-----------APDNTILANSFSKT 238 (391)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc-----------CCCCEEEEecCchh
Confidence 999999999999999999999999999999999999998777543 23343333 23689999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
||++|+|+||++++++ +.+.+..... .++++++.|.++..++.+..+ .+++++.++.++++++.+.+.|+++ |+.
T Consensus 239 ~~~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 316 (391)
T PRK08361 239 FAMTGWRLGFVIAPEQ-VIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIK 316 (391)
T ss_pred cCCcHhhhhhhccCHH-HHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 9999999999999654 4444433432 346788999999999988765 4678889999999999999999987 888
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++++|+|+|++++... ....+++..+++++||.|.||..|+..++++|||+++. +++++++++++|++++++
T Consensus 317 ~~~p~g~~~~~~~l~~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 317 VFEPKGAFYVFANIDETG-----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred ecCCCEEEEEEEECCCCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 899999999999997411 01235777777778999999999986667899999995 788999999999998865
No 32
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=2.5e-50 Score=405.66 Aligned_cols=352 Identities=19% Similarity=0.269 Sum_probs=278.7
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.|+++++ ++.+.+++.+..... ........|++..|.++||++||+++.+.+| +++++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~ 103 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEM-------GTAETFRGYGPEQGYDFLREKIAENDYQARG--CDISADEIF 103 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcc-------cccCCccCCCCCCCCHHHHHHHHHHHHHhcC--CcCChhhEE
Confidence 457899999999885 455666665532110 0002346798889999999999999877665 558899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcE-----------EEEEecCCCCCcccCHHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVE-----------IVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~-----------~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+|+|+++++.++. .++.+||+|++++|+|+.|...++.. |.+ ++.++++++++|.++++.
T Consensus 104 it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------- 174 (409)
T PRK07590 104 ISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMA-GRTGEANEDGRYSGIVYLPCTAENNFVPELPE------- 174 (409)
T ss_pred ECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCcccccccccccceeEeecccccCCcccCcc-------
Confidence 9999999999875 55689999999999999999888877 886 899998766667666432
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (464)
+++++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.+++. ...++..+.. ..
T Consensus 175 -----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~---------~~ 238 (409)
T PRK07590 175 -----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPS--LPHSIYEIEG---------AR 238 (409)
T ss_pred -----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCC--CCcchhhCCC---------cc
Confidence 2789999999999999999999999999999999999999999998766543 2234433311 23
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEEecCHHHHH-----------HHHH-h-cccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-----------AATK-M-SSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~-----------~~~~-~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
+++++++||||+||+||+|+||++++++.+.. .... . ..+..++.+.|.++..++.+.. .+++++
T Consensus 239 ~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~--~~~~~~ 316 (409)
T PRK07590 239 ECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEG--KAQIKE 316 (409)
T ss_pred cceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCc--HHHHHH
Confidence 57999999999999999999999996654431 1111 1 2234578899999999887643 467888
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
.++.++++++.+.+.|+++|+.+.++.+|+|+|++++.... ..+++..+++++||.+.||+.|+..+.+++||+
T Consensus 317 ~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~ 390 (409)
T PRK07590 317 LIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMS------SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS 390 (409)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCC------HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE
Confidence 89999999999999999999888888899999999985322 235777888788999999999976567899999
Q ss_pred eecCCHHHHHHHHHHHHHHH
Q 037587 410 FANITEETLQVALQRIKVFA 429 (464)
Q Consensus 410 ~~~~~~e~l~~~l~~l~~~l 429 (464)
+. .+++++++++++|++++
T Consensus 391 ~~-~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 391 AF-GSRENVLEAMERIKKAL 409 (409)
T ss_pred cc-CCHHHHHHHHHHHHhhC
Confidence 75 48899999999998753
No 33
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=8.2e-50 Score=398.62 Aligned_cols=349 Identities=19% Similarity=0.336 Sum_probs=283.6
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~ 113 (464)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.++||+++++++.+.+| +.+++ ++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~~i~ 94 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMR------------DGHNQYAPMAGIAALREALAEKTERLYG--ARYDPASEVT 94 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHH------------hCCCCcCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 36799999998885 4666666654311 1235799999999999999999988776 33444 6899
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++++++.+||.|++++|+|..+...++.. |++++.+++++ ++|.+|++.+++.++. ++++|
T Consensus 95 it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 166 (384)
T PRK12414 95 VIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQ-GATPVAIKLSP-EDFRVNWDEVAAAITP------RTRMI 166 (384)
T ss_pred EECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHc-CCEEEEEecCc-cccccCHHHHHhhcCc------ccEEE
Confidence 9999999999999999999999999999999998888876 99999999864 4588999999988754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++++++|+||+|.++.|++. .+.++..+.. ..+++++++||||
T Consensus 167 ~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~SfSK 235 (384)
T PRK12414 167 IVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRE---------LAERSVIVSSFGK 235 (384)
T ss_pred EEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcC---------ccCcEEEEecccc
Confidence 9999999999999999999999999999999999999999877654 2233333211 2368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+.+.. ..++++.+.|.++..++.++.+ ..+.++.++++++.+.+.|++.|+.
T Consensus 236 ~~~~pGlRiG~~v~~~~-l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~ 310 (384)
T PRK12414 236 SYHVTGWRVGYCLAPAE-LMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS----YLGLGAFYQRKRDLLARELAGSRFE 310 (384)
T ss_pred cccCccceEEEEecCHH-HHHHHHHHHhheecCCCcHHHHHHHHHhcCChH----HHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 99999999999999654 445454443 2345788999999999987654 3356778899999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC--CCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE--PGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~--~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.+++||||+|++++..... .+.+++..+++++||.|.||+.|+..+ .+++||+++. +++++++++++|.+
T Consensus 311 ~~~~~gg~~~~~~~~~~~~~----~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 311 LLPSEGSFFMLARFRHFSDE----SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred ecCCCcceEEEEcccccCCC----CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 99999999999998753211 123567677788999999999986432 5799999996 89999999999875
No 34
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-49 Score=398.20 Aligned_cols=350 Identities=20% Similarity=0.335 Sum_probs=289.0
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.+++|+++|+++++.+| +.+++++|++
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~i 97 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALA------------AGHTRYTAARGLPALREAIAGFYAQRYG--VDVDPERILV 97 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCccCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEEE
Confidence 46799999999875 5666776665421 1234698888999999999999988766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++.+||.|++++|+|+.+...+... |.+++.++++.+++|.+|++.+++.+++ ++++++
T Consensus 98 t~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~ 170 (387)
T PRK08960 98 TPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLV-EGAAQLVPVGPDSRYQLTPALVERHWNA------DTVGAL 170 (387)
T ss_pred ccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCeEEEEecCcccCCCCCHHHHHHHhCc------cceEEE
Confidence 999999999999999999999999999999998888876 9999999998777889999999988764 678899
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
+++||||||.++|.+++++|+++|+++|+++|+||+|.++.|++. ..++... .+++++++||||.
T Consensus 171 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~---~~~~~~~------------~~~vi~~~S~SK~ 235 (387)
T PRK08960 171 VASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD---AASVLEV------------DDDAFVLNSFSKY 235 (387)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCChhhc------------cCCEEEEeecccc
Confidence 999999999999999999999999999999999999998777533 2333222 2689999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
||++|+|+||++++++ +.+.+...... ..++.+.|.++..++.+. . .+++++.++.++++++.+.+.|+++|+.+
T Consensus 236 ~g~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (387)
T PRK08960 236 FGMTGWRLGWLVAPPA-AVPELEKLAQNLYISASTPAQHAALACFEPE-T-LAILEARRAEFARRRDFLLPALRELGFGI 312 (387)
T ss_pred cCCcccEEEEEEcCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHhhcC-c-HHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 9999999999999654 55555554432 346889999999988753 2 56788899999999999999999988765
Q ss_pred -ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 353 -LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 353 -~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
..|++|+|+|++++.... +..+++..+++++||.|.||+.|+.. ..+|+||+++. +.+.+.+++++|+++++
T Consensus 313 ~~~p~g~~f~~~~~~~~~~-----~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 313 AVEPQGAFYLYADISAFGG-----DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred CcCCCeeEEEEEeccccCC-----CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 467889999999985211 12357778887889999999999753 35699999996 78999999999998775
No 35
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=3.2e-49 Score=395.31 Aligned_cols=357 Identities=22% Similarity=0.418 Sum_probs=291.1
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-CCcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD-PNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i~ 113 (464)
.++|+|+.+.+++. ++.+.+++..... .....|++..|.++||+++++++++.++ +.++ +++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i~ 95 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAID------------ANQSHYTGMAGLLELRQAAADFVKEKYN--LDYAPENEIL 95 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46899999999875 4556666554311 1235698888999999999999987766 3445 47999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++.+++++||.|++++|+|..+...++.. |.+++.++.++ ++|.+|++.+++.+++. ..++++|
T Consensus 96 it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~---~~~~~~i 170 (391)
T PRK07309 96 VTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLV-GAEIVEIDTTE-NDFVLTPEMLEKAILEQ---GDKLKAV 170 (391)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhhcc---CCCeEEE
Confidence 9999999999999999999999999999999998888776 99999999763 46789999999888631 2368999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. .+.++.++ ..+++++++||||
T Consensus 171 ~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~--~~~~~~~~-----------~~~~~i~~~S~SK 237 (391)
T PRK07309 171 ILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE--PHVSIAEY-----------LPDQTILINGLSK 237 (391)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC--CCCCHHHh-----------ccCCEEEEecChh
Confidence 9999999999999999999999999999999999999999887554 33454444 2278999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+..... ..+++.++|.++..++++..+ +....++.++++++.+.+.|+++|+.
T Consensus 238 ~~g~~GlRvG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~ 313 (391)
T PRK07309 238 SHAMTGWRIGLIFAPAE-FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKD---DALPMKKEYIKRRDYIIEKMTDLGFK 313 (391)
T ss_pred hccCccceeEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhCChh---HHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 99999999999999655 4444443332 235788999999999987643 23556778889999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++++|+|+|++++..... +..+++.++++++||.|.||..|+..++++|||+++. +++++++++++|++++++
T Consensus 314 ~~~p~gg~~~~~~l~~~~~~----~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 314 IIKPDGAFYIFAKIPAGYNQ----DSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred ecCCCeeEEEEEECCCCCCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 99999999999999864321 2335777777788999999999987667899999985 789999999999999976
Q ss_pred hC
Q 037587 432 CN 433 (464)
Q Consensus 432 ~~ 433 (464)
++
T Consensus 389 ~~ 390 (391)
T PRK07309 389 HA 390 (391)
T ss_pred hc
Confidence 54
No 36
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-49 Score=398.73 Aligned_cols=360 Identities=21% Similarity=0.404 Sum_probs=295.0
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.+.++ ++.+.+++.+... ....+|+++.|.++||+++++++.+.+| +.+++++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~g--~~~~~~~i~ 97 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIE------------RGETKYTLVNGTPALRKAIIAKLERRNG--LHYADNEIT 97 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 347899999998875 4556666555321 1235799999999999999999988766 446789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|..|...+... |.+++.++++.+++|.+|++.+++.+.. ++++|
T Consensus 98 ~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v 170 (402)
T PRK06107 98 VGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLAN-DGTPVIVACPEEQGFKLTPEALEAAITP------RTRWL 170 (402)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHhhcCc------CceEE
Confidence 9999999999999999999999999999999998877766 8888888887566788999999988753 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhC-CeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSK-RIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~-~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++|||||||.++|.+++++++++|+++ ++++|+||+|.++.|.+. .+.++..+.++ ..+++++++|||
T Consensus 171 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~--------~~~~vi~~~S~S 240 (402)
T PRK06107 171 ILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPE--------LRDRVLVTNGVS 240 (402)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcC--------ccCCEEEEeccc
Confidence 9999999999999999999999999998 999999999998877654 44555555332 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G 349 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 349 (464)
|.||++|+|+||++++++ +.+.+..... .+.++.+.|.++..++.+. .+++++.++.++++++.+.+.|+++ |
T Consensus 241 K~~~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~g 316 (402)
T PRK06107 241 KTYAMTGWRIGYAAGPAD-LIAAINKLQSQSSSCPSSISQAAAAAALNGD---QSFVTESVAVYKQRRDYALALLNAIPG 316 (402)
T ss_pred hhhcCcccceeeeecCHH-HHHHHHHHHHhcccCCChHHHHHHHHHhcCC---hHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999544 5555555443 3458889999999999753 3568888999999999999999987 8
Q ss_pred CeeecCCccEEEEEecCcccc-----cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLV-----SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQR 424 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~-----~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~ 424 (464)
+.+.++++|+|+|++++.... ........+++..+++++||.|+||..|+. ++|+||+++. +++++++++++
T Consensus 317 ~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~--~~~iRis~~~-~~e~l~~~l~~ 393 (402)
T PRK06107 317 LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL--SPYFRLSIAT-SLETLEEACAR 393 (402)
T ss_pred CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC--CCeEEEEeCC-CHHHHHHHHHH
Confidence 888899999999999853211 101112346778888889999999999964 6799999995 89999999999
Q ss_pred HHHHHHhh
Q 037587 425 IKVFAQSC 432 (464)
Q Consensus 425 l~~~l~~~ 432 (464)
|++++++.
T Consensus 394 l~~~l~~~ 401 (402)
T PRK06107 394 IERAVAAL 401 (402)
T ss_pred HHHHHHhc
Confidence 99998764
No 37
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=1.4e-49 Score=392.42 Aligned_cols=341 Identities=23% Similarity=0.379 Sum_probs=281.2
Q ss_pred eEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEEEe
Q 037587 38 IIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLVLT 115 (464)
Q Consensus 38 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~it 115 (464)
+++|+.+.+.++ ++.+.+++++.. .....|+++.|.++||+++++++++.+| ++++++ +|++|
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~Iiit 66 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAV-------------PEVSQYPSALGTKALREAISGWFERRFG--VKLDPDAQVLPS 66 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHH-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEEEc
Confidence 578898887776 566777666531 3456799999999999999999988776 557887 99999
Q ss_pred CChHHHHHHHHHHhcCCC---CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 116 AGSTAANETLMFCLADPG---DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~g---d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+++++..++.+++++| |.|+++.|+|+.|...+... |++++.++++++++|.+|++.+++++.+ ++++
T Consensus 67 ~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~ 139 (350)
T TIGR03537 67 AGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFA-GGEPTAVKLKKEDGFLLRLEKVEKSILE------ETKI 139 (350)
T ss_pred CChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhc-CCEEEEcccCcccCCccCHHHHHHhhhh------ccEE
Confidence 999999999999999887 69999999999999999877 9999999997667889999999998875 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.. ..++..+ ..+++++++|||
T Consensus 140 i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~-----------~~~~~i~~~s~S 205 (350)
T TIGR03537 140 VWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEP---PHSALEV-----------GIENVLAFHSLS 205 (350)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCC---CCchhhc-----------CcCCEEEEeecc
Confidence 99999999999999999999999999999999999999998755432 2333322 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.+|++|+|+||++++ +.+.+.+......+ ..+.+.|.++..++.+.. ++++.++.++++++.+.+.|.+.|+
T Consensus 206 K~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~r~~l~~~~~~~~~~l~~~g~ 280 (350)
T TIGR03537 206 KRSGMTGYRSGFVAGD-EKLISFLRKLRANFGVASPDFVQAAAKAAWSDDN----HVLERRKIFKRKRDLFIEFFNKVGL 280 (350)
T ss_pred cccCCccccceeeecC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcH----HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999984 45555555544333 234467888877776544 4677788999999999999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++.++++|+|+|++++.... ..+++..|+ ++||.|+||..|+...++++||+++ .+++++++++++|++
T Consensus 281 ~~~~~~g~~~~~~~~~~~~~------~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 281 EYLYPDATFYLWVKVPSGID------AKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred cccCCCeEEEEEEECCCCCC------HHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 98899999999999985322 235777776 5799999999997655789999997 588999999999875
No 38
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=3.6e-49 Score=396.56 Aligned_cols=358 Identities=20% Similarity=0.345 Sum_probs=288.2
Q ss_pred CceEEeeccccc----c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 36 SGIIQMGLAENQ----L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 36 ~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
.++|+|+.+++. + +++.+.+++...... .....|++..|..+||+++|+++++. + ..++++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~aia~~~~~~-~--~~~~~~ 96 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDS-----------GKYNGYAPTVGALSAREAIASYYHNP-D--GPIEAD 96 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhc-----------cCCCCCCCCCCCHHHHHHHHHHHhhc-C--CCCCHH
Confidence 477999998763 3 446666665553110 23456988889999999999999863 3 347889
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++.+++.+++++||.|++++|+|..+...+... |++++.++++.+++|.+|++.+++.+.+ ++
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~-g~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESM-GIEVKLYNLLPDKSWEIDLKQLESLIDE------KT 169 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHHhcc------Cc
Confidence 9999999999999999999999999999999999998888877 9999999987666789999999987754 67
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++++++|||||||.+++.+++++|+++|+++|++||+||+|.++.|.+. .+.++..+.+ ..++++++|
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~----------~~~vi~~~S 237 (401)
T TIGR01264 170 AALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGA--TFEPLASLSS----------TVPILSCGG 237 (401)
T ss_pred eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCc--ccccHHHcCC----------CCcEEEEcc
Confidence 8999999999999999999999999999999999999999999877654 3445555422 236999999
Q ss_pred CCcCCCCCccEEEEEEecCH-----HHHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNNE-----RVVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~-----~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
|||+|+++|+|+||++++++ .+.+.+.... ..+.++++.|.++..++.+. . ++++++.++.++++++.+.+.
T Consensus 238 fSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~-~~~l~~~~~~~~~~r~~l~~~ 315 (401)
T TIGR01264 238 LAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRT-P-QEYFDGTLSVLESNAMLCYGA 315 (401)
T ss_pred CcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhC-c-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998641 2333333333 23457889999999999763 2 567888999999999999999
Q ss_pred HHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 037587 345 LKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 345 l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
|+++ |+.+..|++|+|+|++++.... .......+++..+++++||.|+||+.|+ .++++||+++. ++++++++++
T Consensus 316 L~~~~~~~~~~p~~g~f~~~~~~~~~~-~~~~~~~~~~~~l~~~~gI~v~pg~~f~--~~~~iRis~~~-~~~~l~~~l~ 391 (401)
T TIGR01264 316 LAAVPGLRPVMPSGAMYMMVGIEMEHF-PEFKNDVEFTERLVAEQSVFCLPGSCFE--YPGFFRVVLTV-PVVMMEEACS 391 (401)
T ss_pred HHhCCCCcccCCCeeeEEEEEeccccc-CCCCCHHHHHHHHHHhCCEEEeCchhcC--CCCeEEEEEcC-CHHHHHHHHH
Confidence 9988 7777778999999999864200 0011234577888778899999999986 36899999995 7899999999
Q ss_pred HHHHHHHhh
Q 037587 424 RIKVFAQSC 432 (464)
Q Consensus 424 ~l~~~l~~~ 432 (464)
+|+++++++
T Consensus 392 rl~~~~~~~ 400 (401)
T TIGR01264 392 RIQEFCERH 400 (401)
T ss_pred HHHHHHhcc
Confidence 999998753
No 39
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-49 Score=395.17 Aligned_cols=352 Identities=22% Similarity=0.420 Sum_probs=291.1
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ ..+++++|++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~la~~~~~~~~--~~~~~~~i~~ 89 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALA------------DGETFYTHNLGIPELREALARYVSRLHG--VATPPERIAV 89 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcCcceEEE
Confidence 46899999999986 5667777665421 1234699989999999999999988766 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++.+ ++|.+|++.+++.+.+ +++++
T Consensus 90 t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i 162 (382)
T PRK06108 90 TSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKIL-GARVVCVPLDFGGGGWTLDLDRLLAAITP------RTRAL 162 (382)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHC-CCEEEEeeCCCCCCCccCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999998888877 999999998753 4688999999988754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC-CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD-SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.++ +. ...++..+.. ..+++++++|||
T Consensus 163 ~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~S 231 (382)
T PRK06108 163 FINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGG--RAPSFLDIAE---------PDDRIIFVNSFS 231 (382)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCC--CCCCHhhcCC---------CcCCEEEEeech
Confidence 99999999999999999999999999999999999999998775 22 2234333322 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G 349 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 349 (464)
|.||++|+|+||++++++ +.+.+..... ...++.+.|.++..++.+. .+++++.++.++++++.+.+.|++. |
T Consensus 232 K~~g~~G~RiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 307 (382)
T PRK06108 232 KNWAMTGWRLGWLVAPPA-LGQVLEKLIEYNTSCVAQFVQRAAVAALDEG---EDFVAELVARLRRSRDHLVDALRALPG 307 (382)
T ss_pred hhccCcccceeeeeCCHH-HHHHHHHHHHhcccCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999544 4444444332 2346788999999999764 3457788888999999999999887 8
Q ss_pred CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+.+.++++|+|+|++++.... ..+++..+++++||.|+||..|+...++++||+++. +++++++++++|++++
T Consensus 308 ~~~~~p~~g~~~~~~l~~~~~------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 308 VEVAKPDGAMYAFFRIPGVTD------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFL 380 (382)
T ss_pred CcccCCCeeEEEEEeCCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 888889999999999975321 235788888888999999999976567899999997 8999999999999987
Q ss_pred H
Q 037587 430 Q 430 (464)
Q Consensus 430 ~ 430 (464)
+
T Consensus 381 ~ 381 (382)
T PRK06108 381 A 381 (382)
T ss_pred h
Confidence 5
No 40
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-49 Score=392.01 Aligned_cols=342 Identities=19% Similarity=0.297 Sum_probs=272.0
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
++|+|+.|+|+++ ++.+.+++.+.. .....|+++.|.++||+++|+++++.+| +++++++|++|
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~G~~~lr~aia~~l~~~~g--~~~~~~~I~it 89 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNA-------------HLLNKYPKSAGEESLREAQRGFFKRRFK--IELKENELIPT 89 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHh-------------hccCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEEEe
Confidence 7899999999875 455666665431 3456899999999999999999988776 45789999999
Q ss_pred CChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 116 AGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 116 ~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+++++..++.+++ .+||.|+++.|+|+.|...+... |+++++++++++++|.+|+...+ + .++++|
T Consensus 90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~~~--~-------~~~k~v 159 (374)
T PRK05839 90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIAS-RAKVLLMPLTKENDFTPSLNEKE--L-------QEVDLV 159 (374)
T ss_pred cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhc-CCEEEEeecccccCCcCCcchhh--h-------ccccEE
Confidence 999999999988764 57899999999999999988876 99999999987778888765432 2 168899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++|++||+||+|.++.+.. .+.++....... .....+++++++||||
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~----~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILV----GNESFKNVLVINSISK 232 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhccc----CccccCcEEEEecccc
Confidence 999999999999999999999999999999999999999864432 223433321100 0013379999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
+||+||+|+||++++ +.+.+.+..... .+.++.+.|.++..++.+.+ ++++.++.++++++.+.+.| ++.
T Consensus 233 ~~~~~GlRiG~ii~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~l---~~~ 304 (374)
T PRK05839 233 RSSAPGLRSGFIAGD-ASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDE----HAEFFRNIYAKNLKLAREIL---GIT 304 (374)
T ss_pred ccCCccceeEEEecC-HHHHHHHHHHHhhcCCCCChHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHhc---CCC
Confidence 999999999999995 455555554432 24577888998888877644 46777888888888887765 343
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.|++|+|+|++++. ..+++.++++++||.|+||..|+.. .++|+||+++. +++++.+++++|++++
T Consensus 305 --~p~gg~fi~~~~~~---------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 305 --IPPATFYVWLPVDN---------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYL 372 (374)
T ss_pred --CCCeeEEEEEeCCC---------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 67889999999862 1357788877789999999888753 36899999985 7999999999999987
Q ss_pred H
Q 037587 430 Q 430 (464)
Q Consensus 430 ~ 430 (464)
+
T Consensus 373 ~ 373 (374)
T PRK05839 373 E 373 (374)
T ss_pred h
Confidence 5
No 41
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-49 Score=391.87 Aligned_cols=355 Identities=24% Similarity=0.394 Sum_probs=285.2
Q ss_pred CceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.++.+. +.+.+.+.+.. ......|++..|.++||+++++++++.+| +.++++ +|+
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 91 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADAL------------LDGSNQYPPMMGLPELRQAVAAHYARFQG--LDLDPETEVM 91 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHH------------hcCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 367999998776642 33333333321 02346799999999999999999988766 457888 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.+++++ ++|.+|++.+++.+.+ +++++
T Consensus 92 ~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~v 163 (387)
T PRK08912 92 VTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRA-GGVPRLVRLEP-PHWRLPRAALAAAFSP------RTKAV 163 (387)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccCcCCHHHHHHHhCc------cceEE
Confidence 9999999999999999999999999999999999988877 99999999864 3578999999988754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++++++|+||+|.++.|++. .+.++..+.. ..+++++++||||
T Consensus 164 ~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~SK 232 (387)
T PRK08912 164 LLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGR--RHIPLMTLPG---------MRERTVKIGSAGK 232 (387)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCC--CCcChhhCCC---------ccCceEEEeechh
Confidence 9999999999999999999999999999999999999998877653 3344433311 2368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+...... +++++..|.++..++... .+++++.++.++++++.+.+.|+..|+.
T Consensus 233 ~~g~~GlRiG~~~~~~~-~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 308 (387)
T PRK08912 233 IFSLTGWKVGFVCAAPP-LLRVLAKAHQFLTFTTPPNLQAAVAYGLGKP---DDYFEGMRADLARSRDRLAAGLRRIGFP 308 (387)
T ss_pred hccCcCceeEEEecCHH-HHHHHHHHHhhccccCChHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999554 44444444332 346667888887777532 3457788899999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+.++++|+|+|++++..... .+..+++..+++++||.|.||..|+.. ..+|+||+++. +++.+++++++|++++
T Consensus 309 ~~~~~g~~~l~~~l~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 309 VLPSQGTYFLTVDLAPLGLA---EDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAAR 384 (387)
T ss_pred ccCCCcceEEEecccccCCC---CCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHH
Confidence 99999999999999852110 123457888887889999999998642 35799999996 7899999999999987
Q ss_pred Hh
Q 037587 430 QS 431 (464)
Q Consensus 430 ~~ 431 (464)
++
T Consensus 385 ~~ 386 (387)
T PRK08912 385 RR 386 (387)
T ss_pred hc
Confidence 64
No 42
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.2e-49 Score=400.28 Aligned_cols=340 Identities=17% Similarity=0.233 Sum_probs=276.6
Q ss_pred CceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
..+++|+.+.+..++ |.+.+++.... .....|++..|.++||+++++++++..+ .+++|++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-----~~~~Iii 146 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLS-------------RTPRLYGDAPVSPELHAWAARWLRDDCP-----VAFEIDL 146 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhh-------------hhhhhcCCcCCCHHHHHHHHHHHhhccC-----CcCeEEE
Confidence 356899988655443 45555544421 2345799999999999999999985321 3569999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..+++++++|||.|++++|+|+.|...++.. |++++.++++++ .+|++.+++++++ ++++++
T Consensus 147 t~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~---g~~~~~l~~~~~~------~~k~i~ 216 (431)
T PRK15481 147 TSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYA-GFSASPVSVDAE---GMQPEKLERALAQ------GARAVI 216 (431)
T ss_pred ecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCeEEeeccCCC---CCCHHHHHHHHhc------CCCEEE
Confidence 999999999999999999999999999999999999877 999999998643 3789999998864 678888
Q ss_pred Ee-CCCCCCCCCCCHHHHHHHHHHHhhC-CeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 195 IT-NPSNPLGTAMTHQELNHLINFSKSK-RIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 195 l~-~P~NPtG~~~s~~~l~~i~~~~~~~-~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
++ |||||||.++|.+++++|+++|+++ +++||+||+|.++.+.+. .+.... ..+++++++|||
T Consensus 217 ~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~----~~~~~~-----------~~~~vi~~~SfS 281 (431)
T PRK15481 217 LTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY----HSVIPQ-----------TTQRWALIRSVS 281 (431)
T ss_pred ECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC----CCCCcC-----------CCCCEEEEeeec
Confidence 86 9999999999999999999999999 999999999998755322 222111 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|+|| ||+|+||++++++ +.+.+...... .+++.++|.++..+|+++++ .+++++.++.++++++.+.+.|++.|+
T Consensus 282 K~~~-~GlRiG~~i~~~~-~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~~~ 358 (431)
T PRK15481 282 KALG-PDLRLAFVASDSA-TSARLRLRLNSGTQWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQYGI 358 (431)
T ss_pred cccC-CCceeEEEeCCHH-HHHHHHHHHhccccCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999 9999999999554 44444433322 34788999999999999877 788999999999999999999999998
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.+..|++|+|+|++++.. ..+++..++ ++||.|.||..|+.. ..+++||+++..+++++++++++|++++
T Consensus 359 ~~~~p~gg~f~~~~l~~~--------~~~~~~~l~-~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 359 AIPSPGDGLNLWLPLDTD--------SQATALTLA-KSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQAL 429 (431)
T ss_pred ccccCCCeEEEEEECCCC--------HHHHHHHHH-HCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHh
Confidence 887789999999999741 224666665 689999999999643 2468999999878999999999999886
Q ss_pred H
Q 037587 430 Q 430 (464)
Q Consensus 430 ~ 430 (464)
.
T Consensus 430 ~ 430 (431)
T PRK15481 430 N 430 (431)
T ss_pred c
Confidence 4
No 43
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.2e-48 Score=390.52 Aligned_cols=352 Identities=25% Similarity=0.467 Sum_probs=288.7
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
+++|+|+.+.+.++ ++.+.+++.+... .....|++..|.++||+++|+++++.+| +.++++ +|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~~I~ 93 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAIT------------ENYTSYTHNAGLLELRKAACNFVKDKYD--LHYSPESEII 93 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46799999987654 3566666665321 2245798888999999999999987766 557888 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++.+++++||.|++++|+|+.+...+... |++++.++.++ ++|.+|.+.+++.+.+ +++++
T Consensus 94 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~~~~~~------~~~~i 165 (387)
T PRK07683 94 VTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLC-GAKPVFIDTRS-TGFRLTAEALENAITE------KTRCV 165 (387)
T ss_pred EeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHc-CCEEEEeecCc-ccCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999998888876 99999999874 5688899999887754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++|+++|+||+|.++.|.+. ..++.++.. ..+++++++||||
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~---------~~~~vi~~~s~SK 233 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP---HTSIAHFPE---------MREKTIVINGLSK 233 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC---cCChhhccC---------CcCCeEEEeeccc
Confidence 9999999999999999999999999999999999999999776543 234443311 3478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||+||+|+||++++++ +.+.+..... ...++++.|.++..++.++. .++++.++.++++++.+.+.|.+.|+.
T Consensus 234 ~~~~pGlRiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~ 309 (387)
T PRK07683 234 SHSMTGWRIGFLFAPSY-LAKHILKVHQYNVTCASSISQYAALEALTAGK---DDAKMMRHQYKKRRDYVYNRLISMGLD 309 (387)
T ss_pred cccCccceeEEEEcCHH-HHHHHHHHHHhccCCCChHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999654 4444443332 23467789999999997653 357778888999999999999998998
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++++|+|+|+.++... ..+.+++..+++++||.|+||+.|+...++++||+++. +++++.+++++|.+++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 310 VEKPTGAFYLFPSIGHFT-----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred ccCCCeeEEEEEecccCC-----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 889999999999987421 11234677777889999999999986567899999996 899999999999998864
No 44
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-48 Score=389.09 Aligned_cols=354 Identities=20% Similarity=0.329 Sum_probs=287.3
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-CCcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD-PNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i~ 113 (464)
.++++|+.|.++++ ++.+.+++.+.... .....|++..|.+++|+++++++.+..| +.++ +++|+
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~G~~~lr~~~~~~l~~~~g--~~~~~~~~i~ 93 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLAN-----------PENHKYQAVQGIPPLLEAITQKLQQDNG--IELNNEQAIV 93 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 36799999999874 56677776654211 2235799889999999999999988766 4455 67999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+ ++|.+|++++++.+++ ++++|
T Consensus 94 ~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~------~~klv 164 (389)
T PRK05957 94 VTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMA-GCQPILVPTD--DNYQLQPEAIEQAITP------KTRAI 164 (389)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhc-CCEEEEeecC--CCCCcCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999888777766 9999999875 4678999999998864 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++|+++|+||+|.++.|++. ...+...+.. ...++++++||||
T Consensus 165 ~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~SK 233 (389)
T PRK05957 165 VTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPG---------SGNHTISLYSLSK 233 (389)
T ss_pred EEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCC---------ccCcEEEEecchh
Confidence 9999999999999999999999999999999999999999877643 2233333322 3468999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C-
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G- 349 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g- 349 (464)
.||++|+|+||+++++ .+.+.+...... ..++.+.|.++..++.++. .++++.++.++++++.+.+.|++. +
T Consensus 234 ~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~ 309 (389)
T PRK05957 234 AYGFASWRIGYMVIPI-HLLEAIKKIQDTILICPPVVSQYAALGALQVGK---SYCQQHLPEIAQVRQILLKSLGQLQDR 309 (389)
T ss_pred hccCccceeEEEecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999955 455555544432 2456789999999998742 235666667889999999999887 5
Q ss_pred CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+.+.++++|+|+|++++...+ +.+++..+++++||.|+||+.|+....+|+||+++..+++++++++++|.+++
T Consensus 310 ~~~~~~~gg~~~~~~~~~~~~------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 310 CTLHPANGAFYCFLKVNTDLN------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGL 383 (389)
T ss_pred ccccCCCeeEEEEEeCCCCCC------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 377788999999999975322 34688888877899999999997655679999998778999999999999988
Q ss_pred Hhh
Q 037587 430 QSC 432 (464)
Q Consensus 430 ~~~ 432 (464)
++.
T Consensus 384 ~~~ 386 (389)
T PRK05957 384 KTI 386 (389)
T ss_pred Hhh
Confidence 764
No 45
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.8e-48 Score=389.97 Aligned_cols=354 Identities=22% Similarity=0.408 Sum_probs=286.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.++++++ ++.+.+++.+... .....|++..|.++||+++|+++++.++ +.+++++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 94 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALR------------RGVTQYTSALGLAPLREAIAAWYARRFG--LDVAPERIV 94 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHhEE
Confidence 457899999998874 4556666555311 2345799888999999999999988766 457899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++.+++++||+|++++|+|+.+...+... |++++.++++++++|.+|++++++.+.+ ++++|
T Consensus 95 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v 167 (388)
T PRK07337 95 VTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAA-EGRPVLVPSGPAERFQLTAADVEAAWGE------RTRGV 167 (388)
T ss_pred EecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEeecCCccCCcCCHHHHHhhcCc------cceEE
Confidence 9999999999999999999999999999999998887766 9999999998667789999999988754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. +.+...+ .+++++++||||
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~------------~~~vi~~~S~SK 232 (388)
T PRK07337 168 LLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA---PVSALSL------------GDDVITINSFSK 232 (388)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC---CcChhhc------------cCCEEEEEechh
Confidence 9999999999999999999999999999999999999998766432 1232222 267899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++++ +.+.+..... ..+++.+.|.++..++.+..+ +++++.++.++++++.+.+.|+++|+.
T Consensus 233 ~~~~~G~RiG~~~~~~~-l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~~~~~r~~~~~~L~~~~~~ 309 (388)
T PRK07337 233 YFNMTGWRLGWLVVPEA-LVGTFEKLAQNLFICASALAQHAALACFEPDTL--AIYERRRAEFKRRRDFIVPALESLGFK 309 (388)
T ss_pred hcCCchhheeeeecCHH-HHHHHHHHHHHhccCCChHHHHHHHHHhccCch--HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999654 4444444432 235788999999999876542 335778889999999999999998876
Q ss_pred e-ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 C-LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~-~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+ ..|++|+|+|++++..... ...++.+++..+++++||.|.||..|+.. ..+|+||+++. +++.+++++++|.+++
T Consensus 310 ~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 310 VPVMPDGAFYVYADCRGVAHP-AAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred cccCCCeeEEEEEecccccCC-CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 5 4678999999999753211 11123457778888899999999999753 36799999996 7899999999998865
No 46
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=8.3e-49 Score=391.81 Aligned_cols=350 Identities=21% Similarity=0.328 Sum_probs=286.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.|.+.++ ++.+.+++.+... .....|++..|.+++|+++++++++.++ ..++++ +|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~G~~~lr~~~a~~l~~~~~--~~~~~~~~i~ 95 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMA------------AGHNQYPPMTGVAALREAIAAKTARLYG--RQYDADSEIT 95 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 46799999988775 4556666655321 1235799889999999999999998766 334554 899
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|++++|+|+.+...++.. |.+++.++++. .+|.+|++++++.+.+ ++++|
T Consensus 96 ~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~------~~~~v 167 (386)
T PRK09082 96 VTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELA-GGRAVRVALQP-PDFRVDWQRFAAAISP------RTRLI 167 (386)
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCc-ccccCCHHHHHHhcCc------cceEE
Confidence 9999999999999999999999999999999999888876 99999999874 3588999999988764 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++. .+.++.++.. ..+++++++||||
T Consensus 168 ~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~--~~~s~~~~~~---------~~~~~i~~~S~SK 236 (386)
T PRK09082 168 ILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGA--GHASVLRHPE---------LRERAFVVSSFGK 236 (386)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCC--CCCChhhCcC---------ccCcEEEEeechh
Confidence 9999999999999999999999999999999999999999888654 3345444421 2478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||+++++ .+.+.+.+.. ..++++.+.|.++..++... .+++++.++.++++++.+.+.|++.|+.
T Consensus 237 ~~~~~G~RiG~iv~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 312 (386)
T PRK09082 237 TYHVTGWKVGYCVAPA-ALSAEFRKVHQYNTFTVNTPAQLALADYLRAE---PEHYLELPAFYQAKRDRFRAALANSRFK 312 (386)
T ss_pred hccchhhhhhhhhCCH-HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 9999999999999964 4555554443 23457889999999998732 3457788899999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.++++|+|+|+++++... .+..+++..+++++||.|.||+.|+. ...+++||+++. +++.+++++++|++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 313 LLPCEGTYFQLVDYSAISD----LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred ccCCCeeEEEEEeccccCC----CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999999999975211 12335778888889999999998863 245799999996 88999999999875
No 47
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.9e-48 Score=390.27 Aligned_cols=361 Identities=19% Similarity=0.325 Sum_probs=280.6
Q ss_pred CCceEEeecccc-c--c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN-Q--L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
+.++|+|+.+.. + + +++.+.+.+.+. ......|+++.|.++||+++|+++++... ..++++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~-------------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~~ 96 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRN-------------LPTAQGYSDSKGLFSARKAIMQYYQQKGI--PDVDVD 96 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHH-------------hhcCCCCCCCCCcHHHHHHHHHHHhccCC--CCCCcc
Confidence 347899999633 2 2 234344433332 12346799999999999999999975322 247899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.++++.+++|.+|++.+++.+.. ++
T Consensus 97 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~v~~~~~~~~~~~~d~~~l~~~~~~------~~ 169 (404)
T PRK09265 97 DIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLS-GGKPVHYLCDEEAGWFPDLDDIRSKITP------RT 169 (404)
T ss_pred cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhccc------cc
Confidence 9999999999999999999999999999999999999888776 9999999887666788999999988754 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.|++. .+.++..+.+ ..++++++|
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~----------~~~vi~~~S 237 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGA--VHISIASLAP----------DLLCVTFNG 237 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCC--CcCCHHHcCC----------CceEEEEec
Confidence 9999999999999999999999999999999999999999999877654 3345544422 247899999
Q ss_pred CCcCCCCCccEEEEEEec-CHH----HHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSN-NER----VVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~-~~~----~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
|||+||+||+|+||++++ +.. +.+.+.... ....++.++|.++..+|.+.+...++++. ++.++++++.+.+.
T Consensus 238 ~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~r~~~~~~ 316 (404)
T PRK09265 238 LSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILP-GGRLYEQRDRAWEL 316 (404)
T ss_pred chhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999963 332 222222222 22457889999999999765442333333 34567778999999
Q ss_pred HHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 037587 345 LKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 345 l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
|+++ |+.+.+|++|+|+|++++..... ...+.+++.+++.++||.|.||+.|+...++|+||+++ .++++++++++
T Consensus 317 L~~~~~~~~~~p~~g~~l~~~~~~~~~~--~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~-~~~e~l~~~l~ 393 (404)
T PRK09265 317 LNAIPGVSCVKPKGALYAFPKLDPKVYP--IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL-PRVDDLEEAIG 393 (404)
T ss_pred HhcCCCCcccCCCcceEEEEEecccccC--CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC-CCHHHHHHHHH
Confidence 9887 88888899999999999753211 01122455667788999999999997656789999997 58999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++++
T Consensus 394 rl~~~l~~~~ 403 (404)
T PRK09265 394 RIGRFLSGYR 403 (404)
T ss_pred HHHHHHHHhc
Confidence 9999987653
No 48
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-49 Score=374.26 Aligned_cols=355 Identities=20% Similarity=0.351 Sum_probs=291.1
Q ss_pred eeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChH
Q 037587 41 MGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGST 119 (464)
Q Consensus 41 l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~ 119 (464)
|+++....+ |+.+.+++.+.... ...++|.+..|.++|+++|++.+...+|.. ....++|++|+|+.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~-----------~~~~qYt~~~G~p~L~~aL~k~~se~~~~~-~~~~~eVlVT~GA~ 103 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKE-----------PSTNQYTRGYGLPQLRKALAKAYSEFYGGL-LDPDDEVLVTAGAN 103 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhcc-----------chhccccccCCchHHHHHHHHHHHHHhccc-cCCcccEEEecCch
Confidence 888877776 56677777664221 236789988999999999999999866632 23556899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC------CCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 120 AANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS------SSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 120 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~------~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
++|..++++++++||+|++.+|.|..|....... |..++.+++. ....|.+|.+.++.++.+ ++|+|
T Consensus 104 ~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~ma-G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~I 176 (420)
T KOG0257|consen 104 EAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMA-GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAI 176 (420)
T ss_pred HHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhc-CCcceeeccccccccccCccccCChHHHHhhccC------CccEE
Confidence 9999999999999999999999999999999877 9999999987 456799999999999876 99999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++|+||||||.++|+++|++|+++|++||+++|.||+|..+.|++. .+.++..+ + +.+++++.++||||
T Consensus 177 i~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~--~h~r~asl-P--------gm~ertitvgS~gK 245 (420)
T KOG0257|consen 177 ILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGN--KHIRIASL-P--------GMYERTITVGSFGK 245 (420)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCC--cceeeecC-C--------chhheEEEeccccc
Confidence 9999999999999999999999999999999999999998888876 56777767 4 36799999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhh-----HHHHHHHHHHHHHHHHHHHHHHH
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFT-----CNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
+||+.|||+||+++ ++.+......... ...++++.|.|.+.++....-+ ..+++++.+.++++|+.|.+.|.
T Consensus 246 tf~~TGWrlGW~ig-p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~ 324 (420)
T KOG0257|consen 246 TFGVTGWRLGWAIG-PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALE 324 (420)
T ss_pred eeeeeeeeeeeeec-hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 5555554444322 2357788888887776654311 14566789999999999999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccC------ChhHHHHHHHHHHHhcCeEEeCCCCCCCCC-----CCeEEEEeecCCH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSN------TFEAEKELWKKIIFEVGLNISPGSSCHCNE-----PGWFRICFANITE 415 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~------~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~-----~~~~Ris~~~~~~ 415 (464)
++|+++..|+|++|+|++++.....+ ....+..++..++++.|+.+.|++.|+... .+++|+++.. ++
T Consensus 325 ~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k-~~ 403 (420)
T KOG0257|consen 325 ELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK-AD 403 (420)
T ss_pred hcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh-hH
Confidence 99999999999999999998211110 001234578899999999999999999643 3478999885 88
Q ss_pred HHHHHHHHHHHH
Q 037587 416 ETLQVALQRIKV 427 (464)
Q Consensus 416 e~l~~~l~~l~~ 427 (464)
+.++.++++|++
T Consensus 404 ~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 404 ETLRKAIERLKK 415 (420)
T ss_pred HHHHHHHHHHhh
Confidence 999999999883
No 49
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-48 Score=386.58 Aligned_cols=355 Identities=24% Similarity=0.441 Sum_probs=288.4
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.+.++++ ++.+.+++... ......|++..|.+++|+++++++++ ++ +++++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~g~~~lr~~ia~~~~~-~~--~~~~~~~i~~ 93 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNY-------------DEEVLAYSHSQGIPELREAFAKYYKK-WG--IDVEPDEILI 93 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHH-------------hcCCcCcCCCCCCHHHHHHHHHHHHH-hC--CCCCcceEEE
Confidence 46899999998764 45566665542 12346799999999999999999984 44 4578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCccc-CHHHHHHHHHHHhhcCCceEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRI-TISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~~~~~~v 193 (464)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |++++.++++.+++|.. +++.+++.+.+ ++++|
T Consensus 94 t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~g~~~~~~~~l~~~~~~------~~~~v 166 (397)
T PRK07568 94 TNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSA-GVKIVPVTTKIEEGFHLPSKEEIEKLITP------KTKAI 166 (397)
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHc-CCEEEEeecCcccCCCCCCHHHHHHhcCc------cceEE
Confidence 999999999999999999999999999999988877766 99999999875556654 57888887754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. .+.++..+.. ..+++++++||||
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~--~~~s~~~~~~---------~~~~~i~~~S~SK 235 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGL--KYTSALSLEG---------LEDRVIIIDSVSK 235 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCC--CccChhhcCC---------CcCCEEEEecchh
Confidence 9999999999999999999999999999999999999999877654 3445544421 2478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
.||++|+|+||++++++.+.+.+.... ..++++.+.|.++..++++. +.++++.++.++++++.+.+.|+++ |+.
T Consensus 236 ~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (397)
T PRK07568 236 RYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTP---ESYFDEVREEYKKRRDILYEELNKIPGVV 312 (397)
T ss_pred hccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCC---HHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 999999999999986655655443332 23467889999999999764 4568888999999999999999887 788
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHh-----cCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFE-----VGLNISPGSSCHCN---EPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~-----~gI~v~pg~~f~~~---~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
+.+|+||+|+|++++.. ...+++..++++ +||.|.||..|+.. .++++||+++. ++++++++++
T Consensus 313 ~~~p~g~~~~~~~l~~~-------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~ 384 (397)
T PRK07568 313 CEKPKGAFYIIAKLPVD-------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAME 384 (397)
T ss_pred ecCCCcceEEEEecCCC-------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHH
Confidence 88899999999999742 123567777654 69999999988531 34799999984 7899999999
Q ss_pred HHHHHHHhhCcc
Q 037587 424 RIKVFAQSCNPQ 435 (464)
Q Consensus 424 ~l~~~l~~~~~~ 435 (464)
+|+++++++..|
T Consensus 385 ~l~~~l~~~~~~ 396 (397)
T PRK07568 385 ILKEALEKYNKR 396 (397)
T ss_pred HHHHHHHHhhcc
Confidence 999999876644
No 50
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=8e-48 Score=386.72 Aligned_cols=360 Identities=23% Similarity=0.376 Sum_probs=289.2
Q ss_pred CCceEEeeccccc----c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 35 PSGIIQMGLAENQ----L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 35 ~~~~i~l~~~~n~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
..++|+|+.+.+. + +++.+.+++.+.... .....|++..|..++|++++++++...+ ..+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 96 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRS-----------GKFNGYAPSVGALAAREAVAEYLSSDLP--GKLTA 96 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHHhhcC--CCCCH
Confidence 3578999999763 2 345566665553211 2235798888999999999999997544 45678
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|+++++.+++.+++++||+|+++.|+|..+...+... |++++.++++++++|.+|++.+++.+.+ +
T Consensus 97 ~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~ 169 (403)
T TIGR01265 97 DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFS-GLEVRLYDLLPEKDWEIDLDGLEALADE------K 169 (403)
T ss_pred HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEecCCcccCCccCHHHHHHHhCc------C
Confidence 99999999999999999999999999999999999888877766 9999999887666788999999988754 6
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.|++. .+.++.++.+ ..++++++
T Consensus 170 ~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~----------~~~vi~~~ 237 (403)
T TIGR01265 170 TVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDA--PFIPMASFAS----------IVPVLSLG 237 (403)
T ss_pred ccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--Cccchhhhcc----------CCcEEEEe
Confidence 88999999999999999999999999999999999999999999877654 3445555522 25799999
Q ss_pred CCCcCCCCCccEEEEEEecC--HH----HHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNN--ER----VVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~--~~----~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
||||.|++||+|+||+++++ +. +.+.+.... ....++.++|.++..++.+.. ..++++.++.++++++.+.
T Consensus 238 S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~l~ 315 (403)
T TIGR01265 238 GISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTP--QEFFDGKISVLKSNAELCY 315 (403)
T ss_pred ecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999843 22 223333333 234578899999999997632 5678888999999999999
Q ss_pred HHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHH
Q 037587 343 SGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVA 421 (464)
Q Consensus 343 ~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 421 (464)
+.|+.+ |+.+..|++|+|+|++++..... ...+..+++..+++++||.|.||..|+ .++|+||+++. +++.++++
T Consensus 316 ~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~--~~~~iRis~~~-~~~~l~~~ 391 (403)
T TIGR01265 316 EELKDIPGLVCPKPEGAMYLMVKLELELFP-EIKDDVDFCEKLVREESVICLPGSAFG--LPNWVRITITV-PESMLEEA 391 (403)
T ss_pred HHHhcCCCceecCCCceeEEEEeccccccC-CCCCHHHHHHHHHHhCCEEEeCccccC--CCCeEEEEecC-CHHHHHHH
Confidence 999987 78877788999999999753211 111234677888888999999999996 37899999995 78999999
Q ss_pred HHHHHHHHHhh
Q 037587 422 LQRIKVFAQSC 432 (464)
Q Consensus 422 l~~l~~~l~~~ 432 (464)
+++|+++++++
T Consensus 392 l~~l~~~~~~~ 402 (403)
T TIGR01265 392 CSRIKEFCERH 402 (403)
T ss_pred HHHHHHHHHhc
Confidence 99999998654
No 51
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.2e-47 Score=384.74 Aligned_cols=358 Identities=21% Similarity=0.317 Sum_probs=284.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
+.++|+|+.+.+... ++.+.+.+.+... ......|+++.|.++||+++++++++.+| +.++++ +|
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~g--~~~~~~~~i 94 (395)
T PRK08175 28 GEDIIDFSMGNPDGPTPPHIVEKLCEVAQ-----------RPDTHGYSTSRGIPRLRRAISRWYQDRYD--VDIDPESEA 94 (395)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHh-----------CCCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcE
Confidence 357899998755443 3333333333211 02346799999999999999999998766 456776 89
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.++++|||+|++++|+|+.+...+... |++++.++++++++| ++.+++.++. ..+++++
T Consensus 95 ~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~---~~~l~~~l~~---~~~~~~~ 167 (395)
T PRK08175 95 IVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIA-GAQVRSVPLVEGVDF---FNELERAIRE---SYPKPKM 167 (395)
T ss_pred EEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCeEEEEecccCCCc---HHHHHHHHhh---ccCCceE
Confidence 99999999999999999999999999999999988877766 999999998765443 6777777653 1236889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++. ...++..+.. ..+++++++|||
T Consensus 168 v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~---------~~~~~i~~~S~S 236 (395)
T PRK08175 168 MILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPG---------AKDVAVEFFTLS 236 (395)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCC---------cccCEEEEeecc
Confidence 99999999999999999999999999999999999999998877544 3344433311 236789999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||+||+|+||++++ +.+.+.+.+... .++++++.|.++..++.+. .++++.++..++++++.+.+.|++.|+
T Consensus 237 K~~g~pGlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~L~~~~~ 312 (395)
T PRK08175 237 KSYNMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIAEQYKRRRDVLVKGLHEAGW 312 (395)
T ss_pred ccccCcchhheeeeCC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999985 455555555443 2346678898888888653 456888899999999999999999998
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+.++++|+|+|++++...... +..+++.++++++||.|.||..|+..+++++||+++ .+++.+.+++++|+++++
T Consensus 313 ~~~~p~~g~~i~i~l~~~~~~~---~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~-~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 313 MVEMPKASMYVWAKIPEPYAAM---GSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI-ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred cccCCCEEEEEEEECCcccCCC---CHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC-CCHHHHHHHHHHHHHHHH
Confidence 8888889999999998643211 234577788878899999999997666779999998 488999999999999986
Q ss_pred h
Q 037587 431 S 431 (464)
Q Consensus 431 ~ 431 (464)
+
T Consensus 389 ~ 389 (395)
T PRK08175 389 A 389 (395)
T ss_pred h
Confidence 4
No 52
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=7.8e-48 Score=386.51 Aligned_cols=355 Identities=21% Similarity=0.375 Sum_probs=284.6
Q ss_pred CCceEEeecccc---cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN---QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
+.++|+|+.+.+ .+ +++.+.+++.+... .....|++..|.++||+++++++++.+| +.++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~ 94 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIK------------EGHNYYGPSEGLPELREAIVKREKRKNG--VDITPD 94 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHH------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCChh
Confidence 457899999987 34 45666666654311 1235798888999999999999988765 557899
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEE-ecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPI-HCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
+|++|+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+ +.+ +++|.+|++.+++.+.+ +
T Consensus 95 ~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~v~~~~~~-~~~~~~d~~~l~~~~~~------~ 166 (398)
T PRK08363 95 DVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFY-GGVPVEYRTIE-EEGWQPDIDDIRKKITE------K 166 (398)
T ss_pred hEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHc-CCEEEEecccc-ccCCcCCHHHHHhhCCc------c
Confidence 9999999999999999999999999999999999998888766 8888888 443 35688999999887754 7
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++|+++|||||||.++|.+++++|+++|+++|+++|+||+|.++.|.+. +.++..+. ...++++++
T Consensus 167 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~---~~~~~~~~----------~~~~vi~~~ 233 (398)
T PRK08363 167 TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK---HVSPGSLT----------KDVPVIVMN 233 (398)
T ss_pred eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc---ccCHHHcC----------cCCcEEEEe
Confidence 89999999999999999999999999999999999999999998777543 23443332 225799999
Q ss_pred CCCcCCCCCccEEEEEEe--cCHHHHHHHHHhc----ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYS--NNERVVSAATKMS----SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~--~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
||||.|+++|+|+||+++ +++.+........ ..+.++.+.|.++..++.+. .+++++.++.++++++.+.+
T Consensus 234 SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~---~~~l~~~~~~~~~~~~~l~~ 310 (398)
T PRK08363 234 GLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGP---MDYLEEYMKKLKERRDYIYK 310 (398)
T ss_pred cchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 4333322222211 12457889999999998752 45688888999999999999
Q ss_pred HHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 037587 344 GLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVAL 422 (464)
Q Consensus 344 ~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l 422 (464)
.|+++ ++.+.++++|+|+|++++.... ....+++..++.++||.|+||+.|+..+++|+||+++ .+++++++++
T Consensus 311 ~L~~~~~~~~~~p~g~~~~~~~l~~~~~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~~~~~l~~~l 385 (398)
T PRK08363 311 RLNEIPGISTTKPQGAFYIFPRIEEGPW----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL-PPVEILEEAM 385 (398)
T ss_pred HHhcCCCCEecCCCeEEEEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec-CCHHHHHHHH
Confidence 99887 7888889999999999875211 1123466777788999999999997655789999998 4789999999
Q ss_pred HHHHHHHHhh
Q 037587 423 QRIKVFAQSC 432 (464)
Q Consensus 423 ~~l~~~l~~~ 432 (464)
++|++++.+.
T Consensus 386 ~~l~~~~~~~ 395 (398)
T PRK08363 386 DRFEEFMRER 395 (398)
T ss_pred HHHHHHHHHh
Confidence 9999988763
No 53
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-48 Score=386.78 Aligned_cols=329 Identities=18% Similarity=0.245 Sum_probs=267.8
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+|+++ ++.+.+++.+.. .....|+ ..|.++||++||++++ +++++|++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~-------------~~~~~Yp-~~g~~~Lr~aia~~~~--------~~~~~I~v 86 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSW-------------LDHALYP-DGGATTLRQTIANKLH--------VKMEQVLC 86 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHH-------------HhcCcCC-CCCHHHHHHHHHHHhC--------CCcceEEE
Confidence 47899999999995 466666665531 2234576 4588999999999985 78999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++.+++.+++++||.|++++|+|+.|...+... |++++.++++ ++.+|++.+++.+++ ++++++
T Consensus 87 t~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~v~~v~~~---~~~~d~~~l~~~~~~------~~~~v~ 156 (366)
T PRK01533 87 GSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIE-GCEVKEVALN---NGVYDLDEISSVVDN------DTKIVW 156 (366)
T ss_pred CCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCEEEEeecC---CCCcCHHHHHHHhCc------CCcEEE
Confidence 999999999999999999999999999999999988877 9999999985 346899999988754 788999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.+++.+++++|+++|++++ ++|+||+|.++.+.+. ..+...... ..+++++++||||+
T Consensus 157 i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~---~~~~~~~~~---------~~~~vi~~~SfSK~ 223 (366)
T PRK01533 157 ICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD---FPETLPLLE---------KHKNILVLRTFSKA 223 (366)
T ss_pred EeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc---CcchhHHhc---------cCCCEEEEeCchHH
Confidence 9999999999999999999999998876 5677999998655422 123233332 33789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK 354 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 354 (464)
||++|+|+||++++ +.+.+.+.+....+.++.++|.++..+|++.++ .++.++.++++++++.+.++.+|+++.+
T Consensus 224 ~~l~GlRiG~~i~~-~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~----~~~~~~~~~~~r~~~~~~l~~~g~~~~~ 298 (366)
T PRK01533 224 YGLASFRVGYAVGH-EELIEKLNVVRLPFNVSSLAQKAATIAFGDDEF----IEEIVRVNTEGLRQYESFCKENEIPFYQ 298 (366)
T ss_pred hcChHHHHhHHhCC-HHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHhCCCccCC
Confidence 99999999999995 556666666666677999999999999987655 5666677777888888889888999988
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCc
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
++++ |+|++++. ..++...|+ ++||.|++ | ++++||+++ +.++++.++++|+++++..+.
T Consensus 299 ~~~n-f~~~~~~~---------~~~~~~~l~-~~GI~Vr~---~----~~~iRis~~--~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 299 SQTN-FIFLPVEN---------GGEIYEACA-HAGFIIRP---F----PNGVRITVG--TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred CcCc-EEEEeCCC---------HHHHHHHHH-HCCcEEcc---C----CCceEEeCC--CHHHHHHHHHHHHHHHHhccc
Confidence 8775 89999862 124566665 68999997 3 468999998 689999999999998876553
No 54
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1e-47 Score=384.30 Aligned_cols=352 Identities=20% Similarity=0.335 Sum_probs=284.7
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.+.|+|+.++++++ ++.+.+.+.+... ......|++..|.++||+++++++++.+| ..+++++|+
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~ 94 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAA-----------DPAAHLYGPVEGLPELREAYAAHYSRLYG--AAISPEQVH 94 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHh-----------CcCCcCCCCCCCCHHHHHHHHHHHHHHhC--CCCCcceEE
Confidence 345799999998875 4556666555311 02346798888999999999999998766 447889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.+++++++++.+|++.+++.+++ ++++|
T Consensus 95 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v 167 (386)
T PRK07550 95 ITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDML-GIRPVYLPCDEGPGLLPDPAAAEALITP------RTRAI 167 (386)
T ss_pred EecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhc-CCEEEEEecCCCcCCCCCHHHHHHHhcc------cCcEE
Confidence 9999999999999999999999999999999998888776 9999999998666788899999998865 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++|++||+||+|.++.+... ...+..... +..+++++++||||
T Consensus 168 ~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~---------~~~~~~i~~~S~SK 236 (386)
T PRK07550 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADP---------DWDDTLVHLYSFSK 236 (386)
T ss_pred EEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCC---------CccccEEEEecchh
Confidence 9999999999999999999999999999999999999998654332 112222111 12368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
.||++|+|+||++++++ +...+..... ..+++.++|.++..++.+ + ++++++.++.++++++.+.+.|.++ ++
T Consensus 237 ~~g~~G~RiG~i~~~~~-~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 312 (386)
T PRK07550 237 SYALTGHRVGAVVASPA-RIAEIEKFMDTVAICAPRIGQIAVAWGLPN--L-ADWRAGNRAEIARRRDAFRAVFARLPGW 312 (386)
T ss_pred hccCcccceEeeecCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHhcc--H-HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999654 4443433332 234678999999999976 2 5678888899999999999999886 66
Q ss_pred eeecCCccEEEEEecCc-ccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRH-LLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~-~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
.+. +.+|+|+|++++. ..+ ..+++..+++++||.|.||..|+....+++||+++..+++++++++++|+++
T Consensus 313 ~~~-~~g~~~~~~~~~~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 313 ELL-ASGAYFAYVRHPFPDRP------SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred eeC-CCceEEEEecCCCCCCC------HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 554 5688999999975 221 2357888888899999999999765568999999977899999999999876
No 55
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=2.4e-48 Score=390.41 Aligned_cols=349 Identities=18% Similarity=0.279 Sum_probs=271.9
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.|+++++ ++.+.+++.+..... ........|++..|.++||+++|+++.+. .+++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~-------~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-----~~~~d~I~ 99 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDEL-------ASEETFRGYGPEQGYPFLREAIAENDYRG-----RIDPEEIF 99 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcc-------cccccccCCCCCCCCHHHHHHHHHHHHhc-----CCCHHHEE
Confidence 467899999999875 455666655532110 00012356988889999999999986421 27899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCc-----------EEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGV-----------EIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~-----------~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+|+|+++++..++ .++.+||.|++++|+|..|...++.. |+ +++.++++++++|.++++..
T Consensus 100 it~Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------ 171 (402)
T TIGR03542 100 ISDGAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMA-GRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE------ 171 (402)
T ss_pred ECCCcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHc-CCccccccccccceEEEeecchhhCCCCCcccc------
Confidence 9999999999874 56689999999999999999888876 99 99999987656676664221
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (464)
.++++|+++|||||||.++|.+++++|+++|++++++||+||+|.++.+++. ...++..+.. ..
T Consensus 172 -----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~---------~~ 235 (402)
T TIGR03542 172 -----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPG---------AK 235 (402)
T ss_pred -----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCC---------Cc
Confidence 2789999999999999999999999999999999999999999998766542 2233333311 23
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEEecCHHH-------HHHHH-Hh-cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNERV-------VSAAT-KM-SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKR 333 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-------~~~~~-~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 333 (464)
+++++++||||.||+||+|+||++++++.+ ..... .. ..+++++.++|.++..++.+..+ ++..+.++.
T Consensus 236 ~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~~~ 313 (402)
T TIGR03542 236 ECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL--QPILEAISY 313 (402)
T ss_pred ccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch--hHHHHHHHH
Confidence 689999999999999999999999965543 12221 12 23445788999999999887654 345667788
Q ss_pred HHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecC
Q 037587 334 LRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANI 413 (464)
Q Consensus 334 ~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~ 413 (464)
++++++.+.+.|++.|+++.++.+|+|+|++++...+ ..+++..+++++||.|+||+.|+..+++|+||+++.
T Consensus 314 ~~~~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~- 386 (402)
T TIGR03542 314 YMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGIS------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG- 386 (402)
T ss_pred HHHHHHHHHHHHHhcCceecCCCceeEEEEECCCCCC------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-
Confidence 8999999999999988888888889999999985322 235788888788999999999976567899999875
Q ss_pred CHHHHHHHHHHHHHH
Q 037587 414 TEETLQVALQRIKVF 428 (464)
Q Consensus 414 ~~e~l~~~l~~l~~~ 428 (464)
+++++++++++|+++
T Consensus 387 ~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 387 KRENIVEACERIKEA 401 (402)
T ss_pred CHHHHHHHHHHHHhh
Confidence 889999999999875
No 56
>PRK07324 transaminase; Validated
Probab=100.00 E-value=4e-48 Score=384.56 Aligned_cols=346 Identities=23% Similarity=0.310 Sum_probs=285.3
Q ss_pred CCCCCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 32 LHNPSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 32 ~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
.....++++|++++...+. +.+ +++.+... .....|++..|.++||++||++++. ++++
T Consensus 22 ~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~-------~~~~ 81 (373)
T PRK07324 22 DIAESCIDSLTLEELLALAGKNP-EAFYQELG------------QKKLTYGWIEGSPEFKEAVASLYQN-------VKPE 81 (373)
T ss_pred ccccCCCCCCcHHHHHhccCcch-HHHHHHHh------------cCCccCCCCCCCHHHHHHHHHHhcC-------CChh
Confidence 3446789999999987653 334 33333211 2235799989999999999999852 6789
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++.+++.+++++||+|+++.|+|..+...++.. |++++.++++.+++|.+|++.+++.+.+ ++
T Consensus 82 ~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~-g~~v~~v~~~~~~~~~~d~~~l~~~~~~------~~ 154 (373)
T PRK07324 82 NILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESL-GAEVDYWQLKEENGWLPDLDELRRLVRP------NT 154 (373)
T ss_pred hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHhCCC------CC
Confidence 9999999999999999999999999999999999998888776 9999999998777899999999887653 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. +.++.+. .+++++++|
T Consensus 155 kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~---~~s~~~~------------~~~~I~~~s 219 (373)
T PRK07324 155 KLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS---TPSIADL------------YEKGISTNS 219 (373)
T ss_pred cEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC---CCChhhc------------cCCEEEEec
Confidence 9999999999999999999999999999999999999999998766432 2343322 267899999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|||.||++|+|+||+++ ++.+.+.+.+...+ .+++.++|.++..++++. ++++++.++.++++++.+.+.|++.
T Consensus 220 ~SK~~~~~G~RiG~i~~-~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~---~~~l~~~~~~~~~~~~~l~~~l~~~ 295 (373)
T PRK07324 220 MSKTYSLPGIRVGWIAA-NEEVIDILRKYRDYTMICAGVFDDMLASLALEHR---DAILERNRKIVRTNLAILDEWVAKE 295 (373)
T ss_pred chhhcCCccceeEEEec-CHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999 45566666665543 346778999888888753 5568888999999999999999887
Q ss_pred -CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 349 -GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 349 -g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++.+..|++|+|+|+.++... ...+++.++++++||.|.||+.|+. ++++||+++. +++.+++++++|++
T Consensus 296 ~~~~~~~p~gg~~~~i~~~~~~------~~~~~~~~ll~~~gv~v~pg~~F~~--~~~iRis~~~-~~~~l~~~l~rl~~ 366 (373)
T PRK07324 296 PRVSYVKPKAVSTSFVKLDVDM------PSEDFCLKLLKETGVLLVPGNRFDL--EGHVRIGYCC-DTETLKKGLKKLSE 366 (373)
T ss_pred CCceEECCCceEEEEEEeCCCC------CHHHHHHHHHHhcCEEEECccccCC--CCeEEEEecC-CHHHHHHHHHHHHH
Confidence 778888899999999887421 2336888888889999999999974 6799999986 78999999999999
Q ss_pred HHHhh
Q 037587 428 FAQSC 432 (464)
Q Consensus 428 ~l~~~ 432 (464)
+++++
T Consensus 367 ~l~~~ 371 (373)
T PRK07324 367 FLREF 371 (373)
T ss_pred HHHhc
Confidence 99764
No 57
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.3e-48 Score=381.86 Aligned_cols=333 Identities=19% Similarity=0.373 Sum_probs=273.1
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.+++||+.|+|+.+ ++.+.+++.+.. ..+..|++. +.++||+++|++++ +++++|++
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~Y~~~-~~~~lr~~ia~~~~--------~~~~~i~i 76 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENL-------------DKLVEYPDP-DYLELRKRIASFEQ--------LDLENVIL 76 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhhcCCCc-cHHHHHHHHHHHhC--------CChhhEEE
Confidence 34799999999875 455666665531 345679875 57999999999985 78999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.++ .+ +.|++++|+|+.|...+... |++++.++++.+++|.+| +.+.+.+.. ++++++
T Consensus 77 t~Ga~~~l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~ 146 (354)
T PRK06358 77 GNGATELIFNIVKVT-KP-KKVLILAPTFAEYERALKAF-DAEIEYAELTEETNFAAN-EIVLEEIKE------EIDLVF 146 (354)
T ss_pred CCCHHHHHHHHHHHh-CC-CcEEEecCChHHHHHHHHHc-CCeeEEEeCccccCCCcc-HHHHHhhcc------CCCEEE
Confidence 999999999999986 44 68999999999999888766 999999999876778898 666555533 688899
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++|+++|+++++++|+||+|.++.+++. . .+...... ..+++++++||||.
T Consensus 147 ~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~--~-~~~~~~~~---------~~~~vi~~~S~SK~ 214 (354)
T PRK06358 147 LCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENE--T-ISMINYLE---------NFKNLIIIRAFTKF 214 (354)
T ss_pred EeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCcc--c-hhHHHhcc---------CCCCEEEEEechhh
Confidence 999999999999999999999999999999999999998776543 2 23333322 34799999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL 353 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 353 (464)
||++|+|+||++++++.+.+.+.+....+.++.++|.++..++++.+ ++++.++.++++++.+.+.|++. |+.+.
T Consensus 215 ~gl~G~RiG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 290 (354)
T PRK06358 215 FAIPGLRLGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKE----YIKKTIQWIKEEKDFLYNGLSEFKGIKVY 290 (354)
T ss_pred ccCcchhheeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHH----HHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 99999999999987666666666666667788999999999997644 36777888899999999999887 78888
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+++|+ |+|++++.. .+++..++ ++||.|+||+.|+..+++++||+++ ++++++.++++|++++
T Consensus 291 ~~~g~-f~~~~~~~~---------~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~--~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 291 KPSVN-FIFFKLEKP---------IDLRKELL-KKGILIRSCSNYRGLDENYYRVAVK--SREDNKKLLKALEVIL 353 (354)
T ss_pred CCcce-EEEEEcCch---------HHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 88776 899998741 25777776 5799999999996545689999998 6899999999998875
No 58
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.9e-48 Score=386.90 Aligned_cols=357 Identities=31% Similarity=0.527 Sum_probs=296.6
Q ss_pred ceEEeeccccccc--HHHHHHHHHhhhh-hHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 37 GIIQMGLAENQLS--FDLLESWLASNQE-AVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 37 ~~i~l~~~~n~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
++|+|+.|.+... .+.+++++++... . ........|+++.|.++||+++|+++++..+ ++++++ +|
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~~i 71 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGA--------ATSSSFLGYPPPQGYPELREAIADFLGRRYG--VPVDPEANI 71 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHH--------HHHTGCTSSTCTTHHHHHHHHHHHHHHHHHT--HHTTGGEGE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHh--------hcccccccCCCchhhHHHHHHHHHHhhhccC--cccccceEE
Confidence 5799999988875 2334444444321 1 0125677999999999999999999996655 567888 99
Q ss_pred EEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 113 VLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++++|+++++..++..+ .++||+|++++|+|+.+...++.. |+++++++++.+++|.+|++.|++.+++....+.+++
T Consensus 72 ~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 150 (363)
T PF00155_consen 72 LVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLL-GAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPK 150 (363)
T ss_dssp EEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHT-TSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEE
T ss_pred EEecccccchhhhhhcccccccccceecCCcccccccccccc-Cceeeeccccccccccccccccccccccccccccccc
Confidence 99999999999999999 889999999999999999999987 9999999987778899999999999986443333578
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
++++++||||||.++|.+++++|+++|+++++++|+||+|.++.++.. .+.+....+. ...++++++||
T Consensus 151 ~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~---------~~~~vi~~~S~ 219 (363)
T PF00155_consen 151 AVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLD---------EDDNVIVVGSL 219 (363)
T ss_dssp EEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHT---------TTSTEEEEEES
T ss_pred eeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCccccccc---------ccccceeeeec
Confidence 999999999999999999999999999999999999999999877644 3333222333 22459999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
||+||++|+|+||+++ ++.+.+.++.....+..+++.|.++..++.+.....++++++++.++++++.+.+.|++.|+.
T Consensus 220 SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~ 298 (363)
T PF00155_consen 220 SKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIGIT 298 (363)
T ss_dssp TTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred cccccccccccccccc-hhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999 566666777666666568899999999999877556689999999999999999999999999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
+.++++|+|+|+.++.. ++.+++++|+++.||.+.||..|+. ++++||+++..+++++++++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~-------~~~~l~~~L~~~~gi~v~pg~~~~~--~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 299 VLPPEAGFFLWVRLDPN-------DAEELAQELLEEYGILVRPGSYFGV--PGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EEHHSBSSEEEEEESHH-------HHHHHHHHHHHHHTEEEEEGGGGTS--TTEEEEEGGCSCHHHHHHHHHHH
T ss_pred eeeccCccEEEEEcccc-------hHHHHHHHHHHhCCEEEEecCCCCC--CCEEEEEeccCCHHHHHHHHhhC
Confidence 99999999999998853 3457889998777999999999986 88999999557999999999986
No 59
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-48 Score=388.93 Aligned_cols=357 Identities=23% Similarity=0.393 Sum_probs=290.5
Q ss_pred CceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccc-cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 36 SGIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRE-LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 36 ~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
+.+|+|+.+..+. |...+++.+...... .... ...|.++.|..+||++|++++....| +.+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~---------~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g--~~~~~~~ 157 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRN---------YGASLALQYGPTAGLPELREAIAAYLLARRG--ISCEPEQ 157 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhh---------cchhhhhcCCCCCCcHHHHHHHHHHHHHhcC--CccCcCe
Confidence 6778898876433 344455544443211 0122 46788889999999999999986655 6789999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|++|+|++++++++.+.+++|||+|++++|+|.+...+++.. |++++++|+|++ ++|+++|++.+++. ++|
T Consensus 158 IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~-g~~~~~vp~d~~---G~~~e~le~~~~~~-----~~k 228 (459)
T COG1167 158 IVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEAL-GARVIPVPVDED---GIDPEALEEALAQW-----KPK 228 (459)
T ss_pred EEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CCcEEecCCCCC---CCCHHHHHHHHhhc-----CCc
Confidence 999999999999999999999999999999999999999887 999999999854 48999999999763 788
Q ss_pred EEEEe-CCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 192 GVLIT-NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 192 ~vil~-~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
+++++ +-|||||.+||.+++++|+++|+++|++||+||+|+++.|++. +..++..+ +..++|++++|
T Consensus 229 ~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~--p~~~l~~l----------d~~~rViy~gS 296 (459)
T COG1167 229 AVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP--PPPPLKAL----------DAPGRVIYLGS 296 (459)
T ss_pred EEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC--CCCChHhh----------CCCCCEEEEee
Confidence 76554 3489999999999999999999999999999999999988766 33455544 24589999999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHH-HhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAAT-KMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~-~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
|||++. ||+|+||++++++.+..... +......++.+.|.+++..+.++.+ .+|++++|..|+++++.+.+.|+++
T Consensus 297 FSK~l~-PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~ 374 (459)
T COG1167 297 FSKTLA-PGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYL 374 (459)
T ss_pred ehhhcc-cccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999996 99999999996554443322 2223345788999999999997666 9999999999999999999999997
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC-CCCCCCCC--CCeEEEEeecCCHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP-GSSCHCNE--PGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f~~~~--~~~~Ris~~~~~~e~l~~~l~ 423 (464)
++++..|.+|+|+|++++...+. .++...++ ++||.+.| |..|.... .++||++++..++++++++++
T Consensus 375 ~~~~~~~~p~gG~flwl~l~~~~~~------~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~ 447 (459)
T COG1167 375 PELATWTRPEGGLFLWLELPEGIDA------RELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIK 447 (459)
T ss_pred CCCeeeecCCceEEEEEEcCCCCCH------HHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHH
Confidence 36788899999999999976442 24566654 67999998 88887643 458999999989999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|.+++.+..
T Consensus 448 ~l~~~~~~~~ 457 (459)
T COG1167 448 RLAALLREAA 457 (459)
T ss_pred HHHHHHHHHh
Confidence 9999987653
No 60
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-47 Score=380.03 Aligned_cols=360 Identities=26% Similarity=0.494 Sum_probs=294.6
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
...+|+|+.+.+.++ ++.+.+++.+... .....|++..|..+||+++|+++++.++ ..+++++|+
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 95 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALD------------DGKTKYTPAAGIPELREAIAAKLKRDNG--LDYDPSQVI 95 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHh------------cCCCCcCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 356899999988876 3556666555321 1234699888999999999999988766 346889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++.+++++|.+|++.+++.+.+ ++++|
T Consensus 96 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v 168 (393)
T PRK05764 96 VTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLA-GGVPVFVPTGEENGFKLTVEQLEAAITP------KTKAL 168 (393)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHc-CCEEEEEecCcccCCcCCHHHHHHhhCc------cceEE
Confidence 9999999999999999999999999999999998888776 9999999998667889999999998754 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. .+.++.++..+ ..+++++++||||
T Consensus 169 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~--------~~~~~i~~~s~SK 238 (393)
T PRK05764 169 ILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPE--------LRDRTITVNGFSK 238 (393)
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCC--------CcCCEEEEecCcc
Confidence 9999999999999999999999999999999999999998877544 33454444221 3478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
.+|++|+|+||++++ +.+.+.+..... .+.++++.|.++..++.. . .+++++.++.++++++.+.+.|+++ |+
T Consensus 239 ~~~~~G~RiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 314 (393)
T PRK05764 239 AYAMTGWRLGYAAGP-KELIKAMSKLQSHSTSNPTSIAQYAAVAALNG--P-QDEVEEMRQAFEERRDLMVDGLNEIPGL 314 (393)
T ss_pred cccCccceeEEEecC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHcC--C-hHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999985 445555544432 345788999999999873 1 4567888888999999999999998 89
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+.++++|+|+|++++....... ....+++..+++++||.|+||..|+. ++++||+++. +++++++++++|.++++
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~vRis~~~-~~~~~~~~i~~l~~~~~ 390 (393)
T PRK05764 315 ECPKPEGAFYVFPNVSKLLGKSI-TDSLEFAEALLEEAGVAVVPGIAFGA--PGYVRLSYAT-SLEDLEEGLERIERFLE 390 (393)
T ss_pred cccCCCcceEEEEeccccccccc-CCHHHHHHHHHHhCCEEEccccccCC--CCEEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 98889999999999986432111 12246778888888999999998864 7899999985 89999999999999987
Q ss_pred hhC
Q 037587 431 SCN 433 (464)
Q Consensus 431 ~~~ 433 (464)
+++
T Consensus 391 ~~~ 393 (393)
T PRK05764 391 SLK 393 (393)
T ss_pred hhC
Confidence 653
No 61
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=4.9e-47 Score=379.46 Aligned_cols=354 Identities=21% Similarity=0.374 Sum_probs=282.5
Q ss_pred CceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.+..+. +.+.+.+.+.. ......|++..|.++||+++++++.+.++ +.++++ +|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~------------~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~i~ 89 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAI------------AGGVNQYPPGPGIPELRAAIAAQRRRRYG--LEYDPDTEVL 89 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHH------------hcCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCcEE
Confidence 367999998765532 22333333321 01235799889999999999999988766 345665 799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|+.+...+... |.+++.++++++ ++|.+|++.+++.+.+ ++++
T Consensus 90 ~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~ 162 (387)
T PRK07777 90 VTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMA-GAHRVPVPLVPDGRGFALDLDALRAAVTP------RTRA 162 (387)
T ss_pred EeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHC-CCEEEEeecCCccCCCcCCHHHHHHhcCc------ccEE
Confidence 9999999999999999999999999999999998888766 999999998765 4688999999988754 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++|+++++++|+||+|.++.|.+. .+.++..+.. ..+++++++|||
T Consensus 163 v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~S~S 231 (387)
T PRK07777 163 LIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPG---------MRERTVTISSAA 231 (387)
T ss_pred EEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCC---------CcCcEEEEeech
Confidence 99999999999999999999999999999999999999998877544 3334333311 246899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||++|+|+||++++++ +.+.+..... .+..+++.|.++..++.+. .+++++.++.++++++.+.+.|++.|+
T Consensus 232 K~~g~~GlRiG~~~~~~~-l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 307 (387)
T PRK07777 232 KTFNVTGWKIGWACGPAP-LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE---DAWVAALRDSLQAKRDRLAAGLAEAGF 307 (387)
T ss_pred hhccCcCceeEEEecCHH-HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999998554 4444444332 2346778888888888754 356788889999999999999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN---EPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~---~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++.++++|+|+|++++.... ....+++..+++++||.|.||..|+.. ..++|||+++. +++++++++++|++
T Consensus 308 ~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~ 382 (387)
T PRK07777 308 EVHDSAGTYFLCADPRPLGY----DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRA 382 (387)
T ss_pred CccCCCcceEEEecccccCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 99999999999999863211 123468888887889999999988642 24689999996 89999999999988
Q ss_pred HHH
Q 037587 428 FAQ 430 (464)
Q Consensus 428 ~l~ 430 (464)
++.
T Consensus 383 ~~~ 385 (387)
T PRK07777 383 LRG 385 (387)
T ss_pred Hhc
Confidence 753
No 62
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-48 Score=389.39 Aligned_cols=356 Identities=20% Similarity=0.258 Sum_probs=272.4
Q ss_pred ceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHH-cCCCCCCC-CCcEE
Q 037587 37 GIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARI-RGNKVKFD-PNKLV 113 (464)
Q Consensus 37 ~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~-~~~~~~~~-~~~i~ 113 (464)
++|+|+.+++.+++ +.+.++.... .. ..|+++.|.+++|++|++++.+. .+...... .++|+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~-------------~~--~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~ 165 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGI-------------IG--DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLF 165 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHH-------------hc--CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEE
Confidence 57999999988865 5566654432 12 35999999999999999965443 32221112 34999
Q ss_pred EeCChHHHHHHHHHH-----hcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 114 LTAGSTAANETLMFC-----LADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 114 it~G~~~al~~~~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+|+|+++++..++.+ +++|||+|++++|+|+.|...+... .|.++++++.+++++|.+|++.+++++..
T Consensus 166 vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~----- 240 (527)
T PRK09275 166 AVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDP----- 240 (527)
T ss_pred EeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-----
Confidence 999999999999886 6899999999999999998876543 25667777776677899999999987643
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh--CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKS--KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~--~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++|+|+++|||||||.++|.+++++|+++|++ ++++||+||+|.++.+ . +.++.... ++++
T Consensus 241 -~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~---~~s~~~~~-----------~~~~ 303 (527)
T PRK09275 241 -SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--D---FRSLFAVL-----------PYNT 303 (527)
T ss_pred -CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--c---ccCHHHhC-----------CCCE
Confidence 89999999999999999999999999999964 5999999999998543 2 23544332 2689
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHH-H---H--------------------------------HHhcc--cCCCCh
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVS-A---A--------------------------------TKMSS--FGLVSS 307 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~---~--------------------------------~~~~~--~~~~s~ 307 (464)
++++||||.||++|||+||++++++.+.+ . + +++.. ...+++
T Consensus 304 I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~ 383 (527)
T PRK09275 304 ILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLST 383 (527)
T ss_pred EEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCC
Confidence 99999999999999999999997653211 1 1 12211 234667
Q ss_pred HHHHHH-----HHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc---cCC------
Q 037587 308 QTQYLL-----SRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV---SNT------ 373 (464)
Q Consensus 308 ~~q~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~---~~~------ 373 (464)
+.|.++ .++++.. +.+.+++++.+++|++.+.+.|. .++...+++|+||+|++++.... ...
T Consensus 384 p~Q~a~al~~~~all~~~---~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~ 459 (527)
T PRK09275 384 PQQVQMALFSLFALLDEE---DAYKKAMKDIIRRRYKALYEGLG-LPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLK 459 (527)
T ss_pred HHHHHHHHHHHHHHHhCc---hHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhh
Confidence 777762 3445543 45688899999999999988883 23444578999999999975321 100
Q ss_pred -hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCc
Q 037587 374 -FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 374 -~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
..+..+++.+|++++||.+.||+.|+. ..+++|||++..+++++.++.++|+++++++..
T Consensus 460 ~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~-~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 460 KNYSPVDLLFRLAEETGVVLLPGGGFGG-PEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred ccCCHHHHHHHHHhcCCEEEeCchhhCC-CCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 013467899999999999999999985 467899999977899999999999999988764
No 63
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=6.3e-47 Score=403.80 Aligned_cols=372 Identities=19% Similarity=0.267 Sum_probs=286.3
Q ss_pred CCCCCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 28 PYDQLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
.|.++..+.++|+|++|+|+++ ++.+.+++.+.. ... .+ +.|.+++|++|++++.+++| ++
T Consensus 689 ~~~~~~~g~~vI~LsinE~d~ppPp~V~eAi~eal-------------~~~-~~--s~g~pdlr~aLa~~la~~~G--v~ 750 (1082)
T PLN02672 689 LSVSGSQESSLIHMDVDESFLPVPSAVKASIFESF-------------VRQ-NI--SESETDPRPSILQFIKSNYG--FP 750 (1082)
T ss_pred cCCcccCCCCEEEEeCCCCCCCCCHHHHHHHHHHH-------------hhc-CC--CCCChHHHHHHHHHHHHHhC--cC
Confidence 3666666678999999999996 466777766531 111 12 34568899999999998877 44
Q ss_pred CCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 107 FDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 107 ~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
.++ ++|++|+|+++++..++.+++++||.|+++.|+|+.|...++.. |++++.+|++++++|.+|++.+++++.+
T Consensus 751 ~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~-Ga~vv~Vpl~~e~gf~lD~d~Le~al~~--- 826 (1082)
T PLN02672 751 TDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFL-KANFRRIPTKSSDGFKLTAKTLASTLET--- 826 (1082)
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhcc---
Confidence 443 58999999999999999999999999999999999999999887 9999999998777899999999998753
Q ss_pred cCCceEEEEEeCCC-CCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 186 LNLKVKGVLITNPS-NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
.+.++|+++||| ||||.++|.+++++|+++|+++|++||+||+|.++.|.+.+....++......+. ......+
T Consensus 827 --~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~---~~sks~n 901 (1082)
T PLN02672 827 --VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLK---SSNPSFA 901 (1082)
T ss_pred --CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhc---cccCCce
Confidence 123578999997 9999999999999999999999999999999998888653111112222221110 0001247
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHH---HHcC--CchhhHHHHHHHHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLS---RMLS--DKKFTCNYMKENRKRLRKRKE 339 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~---~~l~--~~~~~~~~~~~~~~~~~~~~~ 339 (464)
|++++||||.|+++|+|+||++++++.+.+.+.............|.++. .++. +..+ .+++.+.++.++++++
T Consensus 902 VIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~-~~~l~e~r~~Lk~rRd 980 (1082)
T PLN02672 902 VALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDL-LDGVAEQKKILKSRAE 980 (1082)
T ss_pred EEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999777566666554333323333444433 3332 4455 5678888999999999
Q ss_pred HHHHHHHhCCCeeecCCccEEEEEecCcccc------cC----C-hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 340 MLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV------SN----T-FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 340 ~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~------~~----~-~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
++.+.|+++|+.+.+|+||||+|++++.... .. . ..+..+++..++++.||.|.||..|+ .++|+||
T Consensus 981 ~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG--~~g~~RI 1058 (1082)
T PLN02672 981 RLKETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTG--IPGYCRF 1058 (1082)
T ss_pred HHHHHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccC--CCCeEEE
Confidence 9999999999999999999999998753211 00 0 01245788999988899999998776 3789999
Q ss_pred EeecCCHHHHHHHHHHHHHHHH
Q 037587 409 CFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 409 s~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+++. +++++++++++|+++.+
T Consensus 1059 sfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1059 SFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EecC-CHHHHHHHHHHHHHHHH
Confidence 9995 88999999999999765
No 64
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-46 Score=348.88 Aligned_cols=358 Identities=20% Similarity=0.324 Sum_probs=307.9
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
...++|.|-++.-.++ +|.+.+++++..+ .....|+ .+..++.++|++|+.++++. .+.++-|
T Consensus 23 g~~DvlPmWVADMDf~~pp~i~~Al~~rvd------------hGvfGY~--~~~~~~~~ai~~w~~~r~~~--~i~~e~i 86 (388)
T COG1168 23 GNEDVLPMWVADMDFPTPPEIIEALRERVD------------HGVFGYP--YGSDELYAAIAHWFKQRHQW--EIKPEWI 86 (388)
T ss_pred CCCCcceeeeecccCCCCHHHHHHHHHHHh------------cCCCCCC--CCCHHHHHHHHHHHHHhcCC--CCCcceE
Confidence 4468888888887775 5778888887632 2345666 46688999999999999884 4788899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++++|.--++..++++|.++||.|++..|.|+++....... |.++++.|+. .++.|.+|.++|++++.+ ++++
T Consensus 87 ~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n-~R~~i~~pL~~~~~~y~iD~~~LE~~~~~-----~~vk 160 (388)
T COG1168 87 VFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLN-GRKVIENPLVEDDGRYEIDFDALEKAFVD-----ERVK 160 (388)
T ss_pred EEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhc-CcEEEeccccccCCcEEecHHHHHHHHhc-----CCcc
Confidence 99999999999999999999999999999999999999877 9999999987 466799999999999876 3689
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
++++||||||||.+++.++|++|.++|.+||+.||+||+|+++.+.+. .+.++..+.+. -.++.+.+.|.
T Consensus 161 l~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~--~h~~~a~ls~~--------~a~~~it~~sa 230 (388)
T COG1168 161 LFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH--KHIPFASLSER--------FADNSITLTSA 230 (388)
T ss_pred EEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCC--CccchhhcChh--------hhcceEEEeec
Confidence 999999999999999999999999999999999999999999999875 44555555332 34899999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHH-HHh--cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAA-TKM--SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~-~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
||+|.++|+++++++.+++.+.... +++ .....+|.++..|..++++++ ..|+.++++.++.+++++.+.|.+.
T Consensus 231 SKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G---~~WLd~L~~yl~~N~~~~~~~l~~~ 307 (388)
T COG1168 231 SKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG---EPWLDELLEYLKDNRDYVADFLNKH 307 (388)
T ss_pred cccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999888875543 333 233457889999999999987 5689999999999999999999997
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
++++..|+|.+-+|+++....-. +.++...++.+.+|.+.+|..||..+.|++|+++++ ++..+++++++|+
T Consensus 308 ~P~v~v~~p~gTYL~WLD~r~l~l~-----d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~ 381 (388)
T COG1168 308 LPGVKVTEPQGTYLAWLDCRELGLD-----DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLK 381 (388)
T ss_pred CCCcEEecCCCceeeeeeccccCCC-----hHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHH
Confidence 89999999999999999875332 235778899999999999999999999999999996 9999999999999
Q ss_pred HHHHhh
Q 037587 427 VFAQSC 432 (464)
Q Consensus 427 ~~l~~~ 432 (464)
.++++.
T Consensus 382 ~al~~~ 387 (388)
T COG1168 382 RALKKR 387 (388)
T ss_pred HHHhcc
Confidence 988765
No 65
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.3e-47 Score=371.59 Aligned_cols=315 Identities=15% Similarity=0.237 Sum_probs=249.8
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
++|+|+.|+|+++. .....+||++. ..+||+++|++++ +++++|++|+
T Consensus 17 ~~i~l~~Nenp~~~-----------------------~~~~~~Yp~~~-~~~lr~~ia~~~~--------~~~~~I~it~ 64 (332)
T PRK06425 17 RIIDFSANINDFMD-----------------------IGDISIYPEIS-YTDIEDQIKIYTQ--------GLKIKVLIGP 64 (332)
T ss_pred CEEEeccccCCCcC-----------------------hhhcccCcCcC-HHHHHHHHHHHhC--------CCcceEEECC
Confidence 67999999999851 13456898764 5999999999987 6899999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~ 196 (464)
|+++++.+++. ++++|+ |++++|+|+.|...++.. |++++.+|++. +.+|.+.+++ .++++|+++
T Consensus 65 Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~~~~~~-G~~v~~vp~~~---~~~~~~~l~~---------~~~k~v~l~ 129 (332)
T PRK06425 65 GLTHFIYRLLS-YINVGN-IIIVEPNFNEYKGYAFTH-GIRISALPFNL---INNNPEILNN---------YNFDLIFIV 129 (332)
T ss_pred CHHHHHHHHHH-HhCCCc-EEEeCCChHHHHHHHHHc-CCeEEEEeCCc---ccCcHHHHhh---------cCCCEEEEe
Confidence 99999999997 467764 677799999999999887 99999999863 3445544432 278899999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC
Q 037587 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS 276 (464)
Q Consensus 197 ~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g 276 (464)
|||||||.++|.+++++|+++|++++++||+||+|.++.+.+. .+...+.+ ..+++++++||||+||
T Consensus 130 nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~----~~~~~~~~---------~~~~vi~~~SfSK~~~ 196 (332)
T PRK06425 130 SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA----EEDVLLNR---------SYGNVIIGRSLTKILG 196 (332)
T ss_pred CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc----hhHHHHhc---------cCCCEEEEeecHHhcC
Confidence 9999999999999999999999999999999999998765432 24444433 3378999999999999
Q ss_pred CCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 037587 277 MPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN 356 (464)
Q Consensus 277 ~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 356 (464)
+||+|+||+++++ .+.+.+.+....+.++.+.+.++ ..... ..++++.++.++++++.+.+.|+++|+.+..+.
T Consensus 197 l~GlRiGy~v~~~-~li~~l~~~~~~~~~~~~~~~~l----~~~~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~ 270 (332)
T PRK06425 197 IPSLRIGYIATDD-YNMKISRKITEPWSVCDPAIDFI----RSIDL-DYVAKHSLDIMENERSYLINNLEAMGFRAAGDP 270 (332)
T ss_pred CchhhheeeecCH-HHHHHHHHcCCCCccCHHHHHHH----HHhhh-HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Confidence 9999999999954 46666666665555555544333 22222 455677889999999999999999998876444
Q ss_pred ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 357 AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 357 ~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+|+|+|++++. ..++.+.++ ++||.|+||..|+..+++|+||+++ ++++++.++++|++++
T Consensus 271 ~g~f~~~~~~~---------~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 271 SANFITFMIPD---------AHDFYSYLL-KNGILVRLLDDYECLGEQYIRIAIR--RRSFNIKLVNALRNFL 331 (332)
T ss_pred CceEEEEEcCC---------HHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeC--CHHHHHHHHHHHHHHh
Confidence 55699999861 235677776 5799999999997555689999998 5899999999998765
No 66
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=8.7e-47 Score=373.88 Aligned_cols=334 Identities=19% Similarity=0.257 Sum_probs=258.7
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
.+.++|+|+.|+|+++ ++.+.+++.+. ......|++.. ..+||++||++++ +++++|
T Consensus 20 ~~~~~i~l~~~~n~~~~~~~~~~a~~~~-------------~~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~~~I 77 (360)
T PRK07392 20 PPDAILDFSASINPLGPPESVIAAIQSA-------------LSALRHYPDPD-YRELRLALAQHHQ--------LPPEWI 77 (360)
T ss_pred CcccEEEeCCcCCCCCCCHHHHHHHHHH-------------HHHhhcCCCcC-HHHHHHHHHHHhC--------cChhhE
Confidence 3457899999999985 46666666543 12356798764 5899999999984 789999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCc---ccCHHHHHHHHHHHhhcCCc
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGF---RITISALENAYQQAQTLNLK 189 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~---~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|+|++++|.+++.++. +||.|++++|+|+.|...++.. |++++.++++.++++ ..+++.+++.. .+
T Consensus 78 ~it~G~~~~i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~ 148 (360)
T PRK07392 78 LPGNGAAELLTWAGRELA-QLRAVYLITPAFGDYRRALRAF-GATVKELPLPLDQPSPGLTLRLQTLPPQL-------TP 148 (360)
T ss_pred EECCCHHHHHHHHHHHhC-CCCeEEEECCCcHHHHHHHHHc-CCeEEEEecccccCCcccccCHHHHHHhc-------cC
Confidence 999999999999998875 6899999999999999999877 999999999765554 24455554332 26
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++++++|||||||.+++.+++.+++ +++++ +|+||+|.++.+.+. ..+...... ..+++++++
T Consensus 149 ~~~~~l~nP~NPTG~~~~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~---~~s~~~~~~---------~~~~vi~i~ 212 (360)
T PRK07392 149 NDGLLLNNPHNPTGKLWSREAILPLL---EQFAL-VVVDEAFMDFLPPDA---EQSLIPCLA---------EYPNLIILR 212 (360)
T ss_pred CCEEEEeCCCCCCCCCcCHHHHHHHH---HHCCE-EEEECchhhhccCcc---ccchHHHhh---------cCCCEEEEE
Confidence 78899999999999999987766655 46675 666999999766432 234333333 237899999
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
||||+||++|+|+||++++++ +.+.+.+....+.++.++|.++..++++..+ .++.++.++++++.+.+.|+++
T Consensus 213 S~SK~~~l~GlRiG~~v~~~~-~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~ 287 (360)
T PRK07392 213 SLTKFYSLPGLRLGYAIAHPD-RLQRWQQWRDPWPVNGLAAAAAIAALADRDF----QQQTWAWLPPAREALFQGLASLP 287 (360)
T ss_pred echhhhcCCchheeeeeCCHH-HHHHHHhhCCCCCCCHHHHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999654 4455555555567899999999999987655 5555667888899999999887
Q ss_pred CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
|+.+.+ .+++|+|++++. +..+++..+++++||.|+||..|+..+++|+||+++. .++.+.+.+.|+++
T Consensus 288 ~~~~~~-~~~~fl~~~~~~--------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~~~l~~al~~~ 356 (360)
T PRK07392 288 GLTPLP-SAANFLLVQSQG--------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT--EAENQRLLEALAAI 356 (360)
T ss_pred CcEECC-CCCCEEEEEcCC--------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHH
Confidence 777765 567899999863 1235777877788999999999976567899999984 55566666666655
Q ss_pred HH
Q 037587 429 AQ 430 (464)
Q Consensus 429 l~ 430 (464)
+.
T Consensus 357 ~~ 358 (360)
T PRK07392 357 LA 358 (360)
T ss_pred hh
Confidence 43
No 67
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=6.3e-47 Score=374.20 Aligned_cols=334 Identities=16% Similarity=0.257 Sum_probs=267.8
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.|+|+++ ++.+.+++.... .....|++. +..+||++||++++ +++++|+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~-------------~~~~~y~~~-~~~~lr~~ia~~~~--------~~~~~i~ 76 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNL-------------DCAERYPDV-EYRHLHQALARHHQ--------VPASWIL 76 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHH-------------HhcccCcCc-cHHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999985 466666665431 223468765 58999999999985 6899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.++ .+|+ +++++|+|..|...++.. |++++.++++++++|.+| +++++.+. +++++|
T Consensus 77 it~Ga~~~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~-~~~~~~~~------~~~k~v 146 (356)
T PRK08056 77 AGNGETESIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQV-GCEIRRYSLREADGWQLT-DAILEALT------PDLDCL 146 (356)
T ss_pred ECCCHHHHHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHc-CCeEEEEecccccCCCcc-HHHHHhcc------CCCCEE
Confidence 9999999999999887 6776 677899999998888877 999999999766677777 44444443 378899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.+++.+++++|+++|++++++||+||+|.++.+... .+.+ .+. ..+++++++||||
T Consensus 147 ~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~---~~~---------~~~~~i~~~S~SK 212 (356)
T PRK08056 147 FLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDET--GFIP---QLA---------DNPHLWVLRSLTK 212 (356)
T ss_pred EEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcch--HHHH---Hhc---------cCCCEEEEEechh
Confidence 9999999999999999999999999999999999999998755432 1122 222 2268999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRC 352 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 352 (464)
.||++|+|+||++++++.+.+.+.+....++++.+.|.++..++++..+ .++.++.++++++++.+.|+++ ++.+
T Consensus 213 ~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~ 288 (356)
T PRK08056 213 FYAIPGLRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAY----QQATWQWLAEEGARFYQALCALPLLTV 288 (356)
T ss_pred hccCcchhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9999999999999866556566666566667888999999999976554 6777888899999999999887 7777
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.++. ++|+|++++.. ..+++..++ ++||.|+||..|....++|+||+++ ++++++.++++|+++++
T Consensus 289 ~~~~-~~~~~~~~~~~--------~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 289 WPGR-ANYLFLRCERP--------DIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIR--SAAENERLLAALRNVLT 354 (356)
T ss_pred cCCC-CcEEEEEcCCC--------hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEc--CHHHHHHHHHHHHHHHc
Confidence 7665 57999998731 125677776 6799999999996555679999998 58999999999988764
No 68
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-46 Score=345.36 Aligned_cols=359 Identities=21% Similarity=0.355 Sum_probs=300.1
Q ss_pred ceEEeecccccc----c-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 37 GIIQMGLAENQL----S-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 37 ~~i~l~~~~n~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
.+|.|+.+.+.. . .+...+++..... ....+.|.|..|....|+++|+|+.+... ..+++++
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~-----------Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~--~kl~a~D 128 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALR-----------SGKGNGYAPSVGILPARRAVAEYLNRDLP--NKLTADD 128 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHh-----------cCCCCCcCCccccHHHHHHHHHHhhcCCC--CccCcCc
Confidence 578888875543 1 1333333333211 15578899999999999999999886544 3478999
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|++|+|-++||+.++.+|.+||..||+|.|+|+-|...+... |+++.++++-++.+|.+|++.++..+++ ++.
T Consensus 129 V~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~-~lEVR~ydlLPe~~weIDL~~veal~DE------NT~ 201 (447)
T KOG0259|consen 129 VVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYS-GLEVRYYDLLPEKDWEIDLDGVEALADE------NTV 201 (447)
T ss_pred eEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhc-CceeEeecccCcccceechHHHHHhhcc------Cee
Confidence 999999999999999999999999999999999888877766 9999999998999999999999999876 899
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
++++.|||||+|.+||.+.|++|++.|+++++.||.||+|.++.|++. +|.++.++... --|+.++|+
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~--pfvpmg~fssi----------VPVitlggi 269 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDK--PFVPMGKFSSI----------VPVITLGGI 269 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCC--Cccchhhcccc----------CceEeeccc
Confidence 999999999999999999999999999999999999999999999988 78887777543 358889999
Q ss_pred CcCCCCCccEEEEEEecCH-------HHHHHHHHhccc-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 272 SKDFSMPGFRVGMIYSNNE-------RVVSAATKMSSF-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~-------~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
||-|=+||||+||++..+. .+.+.+..+... ..++++.|.|+-..|.... +++.......++.+.+...+
T Consensus 270 sKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp--~efF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259|consen 270 SKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTP--EEFFDKKLSFLKSNADLCYS 347 (447)
T ss_pred ccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhCh--HHHHHHHHHHHHhhHHHHHH
Confidence 9999999999999986422 122333333333 3467899999999998765 67789999999999999999
Q ss_pred HHHhC-CCe-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHH
Q 037587 344 GLKVA-GIR-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVA 421 (464)
Q Consensus 344 ~l~~~-g~~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 421 (464)
.|++. ++. ...|+|.+|+|+++.-.. -..++++.+|+.+|.+|+.+.+.||..|+. ++|+|++++ ++.+.++++
T Consensus 348 ~Lk~IP~l~cp~kPeg~mylmv~l~~s~-~~~~~dD~dFc~kL~~Eesv~~LPG~af~~--~nw~Ri~i~-~~~~~leea 423 (447)
T KOG0259|consen 348 RLKDIPCLTCPVKPEGCMYLMVKLNLSL-FPDIEDDVDFCQKLAREESVICLPGQAFGL--KNWLRIVIT-VEEEMLEEA 423 (447)
T ss_pred HHhcCCCcccCcCCCcceEEEeccchhh-hccccccHHHHHHHhhhcceEEeccccccC--CCeEEEEEc-cChHHHHHH
Confidence 99998 777 567899999999986431 123456678999999999999999999974 899999999 488999999
Q ss_pred HHHHHHHHHhhC
Q 037587 422 LQRIKVFAQSCN 433 (464)
Q Consensus 422 l~~l~~~l~~~~ 433 (464)
..||+.|++++-
T Consensus 424 ~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 424 FSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHhhh
Confidence 999999998776
No 69
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-47 Score=374.42 Aligned_cols=327 Identities=19% Similarity=0.274 Sum_probs=262.1
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.|+|+++ ++.+.+++.+.. .....|++ .|.++||++||++++ +++++|+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~I~ 86 (357)
T PRK14809 29 PDDLVKLSSNENPHGPSPAAVEAIREAA-------------ERVHSYPK-ASHADLTAALADRWD--------VSPEQVW 86 (357)
T ss_pred ccceeEecCCCCCCCCCHHHHHHHHHHH-------------hhhhcCCC-CCHHHHHHHHHHHhC--------CCcceEE
Confidence 457899999999985 465666665531 23457875 578999999999985 7899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++++++++||.|++++|+|+.+...+... |.+++.++++.+++|.++.+.+.+... ++++|
T Consensus 87 it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~-g~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~k~i 158 (357)
T PRK14809 87 LANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYH-HGEVREYPVSKADDFEQTADTVLDAYD-------GERIV 158 (357)
T ss_pred ECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEEecccCcCCCcCHHHHHHhhc-------CCcEE
Confidence 9999999999999999999999999999999777766666 999999998766678888887766542 57899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++++++|++ +++||+||+|.++.+.. +...... ..+++++++||||
T Consensus 159 ~l~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~------~~~~~~~---------~~~~vi~~~SfSK 222 (357)
T PRK14809 159 YLTSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAERP------SAVALVE---------ERDDVAVLRTFSK 222 (357)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCCc------hhHHHHh---------hCCCEEEEecchh
Confidence 999999999999999999999999875 78999999999865421 2122222 2378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL 353 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 353 (464)
.||++|+|+||++++++ +.+.+.+....+.++.++|.++..++.+.+ ++++.++.++++++.+.+.|...+ .
T Consensus 223 ~~~~~GlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~r~~l~~~L~~~~---~ 294 (357)
T PRK14809 223 AYGLAGLRLGYAVVPEE-WADAYARVNTPFAASELACRAGLAALDDDE----HVERTVETARWAREYIREELDAPT---W 294 (357)
T ss_pred HhcCcchhheeeecCHH-HHHHHHHhCCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHhcCcc---C
Confidence 99999999999999654 555555555556688899999999987644 477778888889999999887542 2
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+.+|+|+|++++. ..+++..+ .++||.|+||+.|+. ++++||+++ +++++++++++|+++++
T Consensus 295 -~~~g~f~~~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~~--~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 -ESAGNFVLAEVGD---------ASAVAEAA-QERGVIVRDCTSFGL--PECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred -CCCCCEEEEECCC---------HHHHHHHH-HHCCEEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 3566899998851 22466665 678999999999863 579999997 57899999999999875
No 70
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=6.7e-47 Score=379.35 Aligned_cols=346 Identities=17% Similarity=0.231 Sum_probs=268.3
Q ss_pred CceEEeecccc--c---cc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN--Q---LS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n--~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
+++|+|+.+.. + .| .+.+.+++.+.... .....|++..|.++||+++++++.+..+ ..+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-----------~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~ 92 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-----------ETTKNYLPIEGLAAYRQAVQELLFGADS--PALAA 92 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc-----------ccCCCcCCCCCCHHHHHHHHHHhcCCCC--ccccc
Confidence 46799999852 1 12 24566665553110 2345799999999999999999965432 23578
Q ss_pred CcE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKL--VLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++| ++|+|+++++.++++++ ++|||+|++++|+|+.|...++.. |++++.+++...++|.+|++.+++.+...
T Consensus 93 ~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~-g~~~v~v~~~~~~~~~~d~~~l~~~~~~~-- 169 (396)
T PRK09257 93 GRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAA-GLEVKTYPYYDAATKGLDFDAMLADLSQA-- 169 (396)
T ss_pred CeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHc-CCcEEEEeccccccCccCHHHHHHHHHhC--
Confidence 887 99999999999998766 589999999999999999999877 99999999843345889999999987641
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
.++..+++++|||||||.++|.+++++|+++|++++++||+||+|.++.++... ...++..+.. ..+++
T Consensus 170 -~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~-~~~~~~~~~~---------~~~~v 238 (396)
T PRK09257 170 -PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEE-DAYGLRAFAA---------AGLEL 238 (396)
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHH-HHHHHHHHHh---------cCCcE
Confidence 123456677999999999999999999999999999999999999987654210 2234433322 23689
Q ss_pred EEEcCCCcCCCCCccEEEEEEe--cCHH-HHH---HHHHh--cccCCCChHHHHHHHHHcCCchh---hHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYS--NNER-VVS---AATKM--SSFGLVSSQTQYLLSRMLSDKKF---TCNYMKENRKRL 334 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~--~~~~-~~~---~~~~~--~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~ 334 (464)
++++||||.|+++|+|+||+++ +++. +.+ .+... ..++.++.+.|.++..++.++.+ ..++++++++.+
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~ 318 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERI 318 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999989999999973 3322 222 22222 23344678899999999998753 257788899999
Q ss_pred HHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe
Q 037587 335 RKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF 410 (464)
Q Consensus 335 ~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~ 410 (464)
+++++.+.+.|++.+ +.+..++||||+|++++. +++.++++++||.+.|. + ||++
T Consensus 319 ~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------~~~~~l~~~~~V~~~p~--------~--ri~~ 377 (396)
T PRK09257 319 KAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTP-----------EQVDRLREEFGVYAVGS--------G--RINV 377 (396)
T ss_pred HHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCH-----------HHHHHHHHcCCEEEcCC--------C--eEEE
Confidence 999999999999874 667789999999999862 35677888999999862 2 9999
Q ss_pred ecCCHHHHHHHHHHHHHHH
Q 037587 411 ANITEETLQVALQRIKVFA 429 (464)
Q Consensus 411 ~~~~~e~l~~~l~~l~~~l 429 (464)
+.++++++++++++|++++
T Consensus 378 ~~~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 378 AGLNESNIDYVAEAIAAVL 396 (396)
T ss_pred eeCCHHHHHHHHHHHHhhC
Confidence 8779999999999998753
No 71
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-46 Score=373.22 Aligned_cols=342 Identities=19% Similarity=0.243 Sum_probs=266.0
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
.+++|+.|+|+++ ++.+.+++.+.... ......|++ .|.++||++||+++++.++.++.+++++|++|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQ----------GIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhh----------cccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEc
Confidence 4799999999985 46677766653111 012357876 68899999999999877654566899999999
Q ss_pred CChHHHHHHHHHHhcCCCC-eEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 116 AGSTAANETLMFCLADPGD-AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd-~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+|+++++..++.+++.+|| .|++++|+|+.|...++.. |++++.+++++ ++|.+|++++++++++. ...++++|+
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~~--~~~~~k~i~ 173 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTL-GIPVVRVGRDP-ETFEIDLAAAQSAIEQT--QNPPVRVVF 173 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEecCCc-ccCCCCHHHHHHHHHhh--cCCCceEEE
Confidence 9999999988888888886 8999999999999988877 99999999864 45899999999988631 113789999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++++++| ++++||+||+|.++.+ . . .+..+ . ..+++++++||||+
T Consensus 174 l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~--~--~--~~~~~-~---------~~~~~ivi~SfSK~ 235 (374)
T PRK02610 174 VVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQ--T--T--LVGEL-A---------QHPNWVILRTFSKA 235 (374)
T ss_pred EeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCc--c--c--hHHHH-h---------cCCCEEEEEecchh
Confidence 999999999999999999999876 4899999999998532 2 1 11112 2 22578899999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL 353 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~ 353 (464)
||+||+|+||++++ +.+.+.+.+....+.++.++|.++..++.+. +.+.+.++..+++ ++.+.+.|+++ ++.+.
T Consensus 236 ~g~~GlRiG~~v~~-~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~ 310 (374)
T PRK02610 236 FRLAAHRVGYAIGH-PELIAVLEKVRLPYNLPSFSQLAAQLALEHR---QELLAAIPEILQE-RDRLYQALQELPQLRVW 310 (374)
T ss_pred ccCcccceeeeecC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeC
Confidence 99999999999984 4565666665555668899999999999864 3445555555554 67788888876 66654
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+++|+|+|++++...+ ..+++..+ .++||.|+++ ++++||+++. ++++++++++|++++++..
T Consensus 311 -p~~g~f~~~~l~~~~~------~~~~~~~l-~~~gi~v~~~-------~~~lRls~~~--~~~~~~~l~~l~~~l~~~~ 373 (374)
T PRK02610 311 -PSAANFLYLRLSQDAA------LAALHQAL-KAQGTLVRHT-------GGGLRITIGT--PEENQRTLERLQAALTQLE 373 (374)
T ss_pred -CCcceEEEEeCCCCCC------HHHHHHHH-HHCCEEEEeC-------CCeEEEeCCC--HHHHHHHHHHHHHHHhhcC
Confidence 5677899999985321 23466665 5789999864 4689999984 6789999999999987654
No 72
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=375.11 Aligned_cols=327 Identities=19% Similarity=0.281 Sum_probs=261.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.|+|+++ ++.+.+++... .....|++. +..+||++||++++ +++++|+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~--------------~~~~~Yp~~-~~~~lr~~ia~~~~--------~~~~~I~ 107 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM--------------KFPYVYPDP-ESRRLRAALAEDSG--------LESENIL 107 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh--------------HhhccCCCC-CHHHHHHHHHHHhC--------cChhhEE
Confidence 458899999999985 46666655431 223568765 57999999999986 6889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+.|...++.. |++++.++++ ++|.+|++.+++.+.. .++++|
T Consensus 108 ~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~~~~-----~~~~~v 179 (380)
T PLN03026 108 VGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVN-GAEVIKVPRT--PDFSLDVPRIVEAVET-----HKPKLL 179 (380)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHHhc-----cCCcEE
Confidence 9999999999999999999999999999999888777766 9999999985 3578999999988732 278999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.+++.+++++|++.+ +++|+||+|.++.+.+. ...... ..+++++++||||
T Consensus 180 ~l~~P~NPTG~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~~~------~~~~~~---------~~~~viv~~SfSK 240 (380)
T PLN03026 180 FLTSPNNPDGSIISDDDLLKILELP----ILVVLDEAYIEFSTQES------RMKWVK---------KYDNLIVLRTFSK 240 (380)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHhcC----CEEEEECcchhhcCCcc------hHHHHH---------hCCCEEEEecchH
Confidence 9999999999999999999998753 89999999998654221 112222 2378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Cee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRC 352 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~ 352 (464)
.||++|+|+||+++++ .+.+.+.+....+.++.++|.++.++|.+.++ +++.++.++++++.+.+.|++++ +.+
T Consensus 241 ~~glaGlRiGy~~~~~-~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~ 315 (380)
T PLN03026 241 RAGLAGLRVGYGAFPL-SIIEYLWRAKQPYNVSVAAEVAACAALSNPKY----LEDVKNALVEERERLFGLLKEVPFLEP 315 (380)
T ss_pred hhcCccccceeeecCH-HHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence 9999999999999955 45556666666677899999999999987554 67788889999999999999885 455
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
. +.+++|+|++++... ...+++..|+ ++||.|+++..++ .++++|||++ ++++++.++++|+++
T Consensus 316 ~-p~~~~f~~~~~~~~~------~~~~~~~~l~-~~gI~v~~~~~~~--~~~~lRis~~--~~~~~~~l~~al~~~ 379 (380)
T PLN03026 316 Y-PSDANFILCRVTSGR------DAKKLKEDLA-KMGVMVRHYNSKE--LKGYIRVSVG--KPEHTDALMEALKQL 379 (380)
T ss_pred C-CCCCeEEEEECCCCC------CHHHHHHHHH-HCCeEEEECCCCC--CCCEEEEecC--CHHHHHHHHHHHHHh
Confidence 4 456679999987421 1235777776 7899999987632 4679999998 577888888888653
No 73
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-46 Score=378.20 Aligned_cols=353 Identities=15% Similarity=0.207 Sum_probs=267.9
Q ss_pred CceEEeeccccc-c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAENQ-L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.++|+|+.+..+ . ++..+.+.+.+..... . .......|++..|.++||+++|+++.+..+ ..+++++|+
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~-~------~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~--~~~~~~~v~ 99 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKII-A------EKNLDKEYLPIEGLQSFIEAAQKLLFGEAS--YALAEKRIA 99 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHh-c------cccCCCCCCCCCCCHHHHHHHHHHhcCCCc--cccccCeEE
Confidence 467999998742 2 2222233333321110 0 013457899999999999999999864322 346888998
Q ss_pred --EeCChHHHHHHHHH---HhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 114 --LTAGSTAANETLMF---CLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 114 --it~G~~~al~~~~~---~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.|.|+++++..++. +++++||.|++++|+|+.|...++.. |++++.+++.++++|.+|++.+++.+++. .+
T Consensus 100 ~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---~~ 175 (404)
T PTZ00376 100 TVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSA-GLNVKEYRYYDPKTKGLDFDGMLEDLRTA---PN 175 (404)
T ss_pred EeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCceeeccccCcccCCcCHHHHHHHHHhC---CC
Confidence 59999999988875 67899999999999999999998877 99999999854556899999999988642 12
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
+.++++++|||||||.++|.+++++|+++|++|+++||+||+|.++.|.+......++..+.. ..++++++
T Consensus 176 ~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~---------~~~~vi~i 246 (404)
T PTZ00376 176 GSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE---------RGVEFLVA 246 (404)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh---------cCCcEEEE
Confidence 456778899999999999999999999999999999999999999877531001223333322 23589999
Q ss_pred cCCCcCCCCCccEEEEE---EecCHH---HHHHHHHh-cc-cCCCChHHHHHHHHHcCCchhhH---HHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMI---YSNNER---VVSAATKM-SS-FGLVSSQTQYLLSRMLSDKKFTC---NYMKENRKRLRKR 337 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l---~~~~~~---~~~~~~~~-~~-~~~~s~~~q~~~~~~l~~~~~~~---~~~~~~~~~~~~~ 337 (464)
+||||+||++|+|+||+ +++++. +...+.+. .. +...++++|.++..+++++++.+ +++++.++.++++
T Consensus 247 ~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 326 (404)
T PTZ00376 247 QSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNM 326 (404)
T ss_pred EeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 344332 22222222 22 33456789999999999875533 3356667889999
Q ss_pred HHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecC
Q 037587 338 KEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANI 413 (464)
Q Consensus 338 ~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~ 413 (464)
++.+.+.|++.+ +.+.++++|||+|++++. +++.+|++++||.+.|| + ||+++.+
T Consensus 327 r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~-----------~~~~~L~~~~~v~v~p~--------~--Ris~~~~ 385 (404)
T PTZ00376 327 RQLLYDELKALGSPGDWEHIINQIGMFSFTGLTK-----------EQVERLIEKYHIYLLDN--------G--RISVAGL 385 (404)
T ss_pred HHHHHHHHHhcCCCCcccccccCceEEEecCCCH-----------HHHHHHHHhCCEeecCC--------C--eEEEecc
Confidence 999999999875 455678999999998852 57888998889999987 1 9999867
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 037587 414 TEETLQVALQRIKVFAQS 431 (464)
Q Consensus 414 ~~e~l~~~l~~l~~~l~~ 431 (464)
++++++.++++|++++..
T Consensus 386 ~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 386 TSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred CHHhHHHHHHHHHHHHhc
Confidence 899999999999998753
No 74
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-46 Score=373.63 Aligned_cols=335 Identities=18% Similarity=0.261 Sum_probs=270.5
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.|+|++. ++.+.+++.+.. ....+|++..| .+||+++|++++ +++++|+
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~-------------~~~~~Y~~~~g-~~lr~~ia~~~~--------~~~~~i~ 92 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIA-------------ELLRLYPDPQG-RALREAIAARTG--------VPADRII 92 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 457899999999974 566776665531 23567998888 599999999985 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|+++.|+|+.+...++.. |++++.+++++ ++.+|++++++.+++ +++++
T Consensus 93 ~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~------~~~~v 163 (371)
T PRK05166 93 LGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMM-GARVERVTVTP--DLGFDLDALCAAVAR------APRML 163 (371)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHhhhc------CCCEE
Confidence 9999999999999999999999999999999888877766 99999999864 467899999988865 67889
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++++|+++|++ +++||+||+|.++.++.. ..+......+ ..+++++++||||
T Consensus 164 ~l~~p~NPtG~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~---~~~~~~~~~~--------~~~~vi~i~SfSK 231 (371)
T PRK05166 164 MFSNPSNPVGSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGDD---YPSALTLLKA--------RGLPWIVLRTFSK 231 (371)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcC---cccHHHHHhh--------cCCCEEEEeechH
Confidence 999999999999999999999999875 889999999998765332 2343333321 2358999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL 353 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 353 (464)
.||++|+|+||++++++.+.+.+.+....+.++.++|.++.+++.+.++ +++.++.++++++.+.+.|++.|+.+.
T Consensus 232 ~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~~ 307 (371)
T PRK05166 232 AYGLAGLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEH----LAKGVALALAERERLKKELAEMGYRIA 307 (371)
T ss_pred hhhcchhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCcCeeC
Confidence 9999999999988767777776666666667889999888888876544 677778888899999999999898876
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++ +|+|+|++++. ...+++..++ ++||.|+||..++ .++++||+++ ++++.+.+++.|+.+++
T Consensus 308 p~-~g~fl~~~~~~--------~~~~l~~~l~-~~gi~v~p~~~~~--~~~~iRi~~~--~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 308 PS-RANFLFFDARR--------PASAVAEALL-RQGVIVKPWKQPG--FETFIRVSIG--SPEENDHFVAALDKVLE 370 (371)
T ss_pred CC-cCCEEEEeCCC--------CHHHHHHHHH-HCCeEEecCCCCC--CCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 54 46799999763 1235777776 5699999997654 4789999998 47778888888877643
No 75
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.6e-46 Score=372.73 Aligned_cols=337 Identities=23% Similarity=0.395 Sum_probs=264.5
Q ss_pred CCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CC
Q 037587 31 QLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK-FD 108 (464)
Q Consensus 31 ~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~ 108 (464)
...++.++|+|+.+.+..+ ++.+.+++.+. .....|+++.|.++||+++|+++.+.++ ++ ++
T Consensus 22 ~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~l~~~~~--~~~~~ 85 (364)
T PRK07865 22 AAAHPDGIVDLSVGTPVDPVPPVIQEALAAA--------------ADAPGYPTTAGTPELREAIVGWLARRRG--VTGLD 85 (364)
T ss_pred HHhcCCCEEEcCCCCCCCCCCHHHHHHHHHH--------------HhhCCCCCccCCHHHHHHHHHHHHHHcC--CCCCC
Confidence 3345567899999976554 35666666542 1224799989999999999999998766 44 67
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+++|++|+|+++++..++.++ +++||.|++++|+|+.+...+... |++++.++. ++++..
T Consensus 86 ~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~---------~~~l~~--------- 146 (364)
T PRK07865 86 PAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLA-GATVVRADS---------LTELGP--------- 146 (364)
T ss_pred cccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhc-CCEEEecCC---------hhhCCc---------
Confidence 999999999999999998888 799999999999999998888876 999888741 233322
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
.++++|+++|||||||.++|.+++++|+++|+++|++||+||+|.++.+.+. . .+... ... .+...+++++
T Consensus 147 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~-~~~~~--~~~----~~~~~~~~i~ 217 (364)
T PRK07865 147 QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAE--P-VSILD--PRV----CGGDHTGLLA 217 (364)
T ss_pred ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCC--C-Ccccc--ccc----cCCccceEEE
Confidence 2788999999999999999999999999999999999999999998766543 1 22111 100 0012368999
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
++||||.||++|+|+||++++++ +.+.+.... ..+.++++.|.++..++.+.+ ++++.++.++++++.+.+.|
T Consensus 218 ~~S~SK~~~~~GlRiG~i~~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L 292 (364)
T PRK07865 218 VHSLSKQSNLAGYRAGFVAGDPA-LVAELLEVRKHAGMMVPAPVQAAMVAALGDDA----HVREQRERYARRRAVLRPAL 292 (364)
T ss_pred EeechhccCCCceeeEEEecCHH-HHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998544 444444332 234578899999999998744 46777888999999999999
Q ss_pred HhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 346 KVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 346 ~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
++.|+.+..+++|+|+|++++.. ..+++..+ .++||.|.||..|+...++++||+++. +++++++++++|
T Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l 362 (364)
T PRK07865 293 EAAGFRVDHSEAGLYLWATRGED--------CWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERL 362 (364)
T ss_pred HHcCCcccCCCccEEEEEeCCCC--------HHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHh
Confidence 99998888889999999987421 12344444 578999999998876567899999985 789999999988
Q ss_pred H
Q 037587 426 K 426 (464)
Q Consensus 426 ~ 426 (464)
+
T Consensus 363 ~ 363 (364)
T PRK07865 363 A 363 (364)
T ss_pred h
Confidence 5
No 76
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.9e-46 Score=367.36 Aligned_cols=336 Identities=22% Similarity=0.376 Sum_probs=263.6
Q ss_pred CCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CC
Q 037587 31 QLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK-FD 108 (464)
Q Consensus 31 ~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~ 108 (464)
...++.++|+|+.+.+..+ ++.+.+++... .....|++..|.++||+++++++++.++ ++ ++
T Consensus 16 ~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~--------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~~ 79 (357)
T TIGR03539 16 AASHPDGIVDLSVGTPVDPVPPLIRAALAAA--------------ADAPGYPQTWGTPELREAIVDWLERRRG--VPGLD 79 (357)
T ss_pred hhhCCCCeEEccCCCCCCCCCHHHHHHHHHH--------------HhhCCCCcccCCHHHHHHHHHHHHHhcC--CCCCC
Confidence 3445667899999876554 35566665542 1235799999999999999999988766 44 78
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+++|++|+|+++++..++.++ +++||.|++++|+|+.+...+... |++++.++ +++.+..
T Consensus 80 ~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~---------~~~~l~~--------- 140 (357)
T TIGR03539 80 PTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLA-GATPVAAD---------DPTELDP--------- 140 (357)
T ss_pred cCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhc-CCEEeccC---------ChhhcCc---------
Confidence 899999999999999998888 799999999999999998887766 99888764 2232221
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
.++++|+++||+||||.++|.+++++|+++|+++|+++|+||+|.++.|.+. . .+. +.+.. .+...+++++
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~-~~~--~~~~~----~~~~~~~vi~ 211 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR--P-VSI--LDPRV----CGGDHTGLLA 211 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC--C-ccc--eeccc----CCCccccEEE
Confidence 2688999999999999999999999999999999999999999998766543 2 121 11100 0012368999
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
++||||.||++|+|+||+++++ .+.+.+.+.. ..++++.+.|.++..++.+.. +++..+..++++++.+.+.|
T Consensus 212 ~~S~SK~~~~~G~R~G~~i~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 212 VHSLSKRSNLAGYRAGFVAGDP-ALVAELLTVRKHAGLMVPAPVQAAMVAALGDDG----HVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred EeccccccCCCceeEEEEecCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHH----HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999854 4544444333 234578899999999998643 46677888999999999999
Q ss_pred HhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 346 KVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 346 ~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
++.|+.+.++++|+|+|++++. ...++...+ .++||.|.||..|+...++++||+++. +++++++++++|
T Consensus 287 ~~~g~~~~~p~~~~~~~~~~~~--------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 287 EKAGFRIDHSEAGLYLWATRGE--------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred HHcCCCCcCCCccEEEEEECCC--------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 9999988899999999999863 122455555 578999999998876557899999996 789999999876
No 77
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-46 Score=370.43 Aligned_cols=328 Identities=20% Similarity=0.283 Sum_probs=266.2
Q ss_pred ceEEeecccccc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
++|+|++|+|++ +++.+.+++.... ... .|.+..|.+++|+++|++++ +++++|++|
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~-------------~~~-~~~p~~g~~~lr~~ia~~~~--------~~~~~i~~t 87 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHL-------------DEL-ALYPDGYAPELRTKVAKHLG--------VDEEQLLFG 87 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHH-------------HHh-hcCCCCcHHHHHHHHHHHhC--------CCHHHEEEC
Confidence 689999999998 4566777665531 223 34445688999999999985 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
+|+++++..++.+++++||.|++++|+|+.+...+... |++++.++++ ++.+|++.+++.+.+ +++++++
T Consensus 88 ~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~d~~~l~~~~~~------~~~~v~i 157 (359)
T PRK03158 88 AGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIE-GAEVREVPLK---DGGHDLEAMLKAIDE------QTKIVWI 157 (359)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEEecC---CCCcCHHHHHHhcCC------CCCEEEE
Confidence 99999999999999999999999999999998888776 9999999986 356899999887653 7889999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
+|||||||.++|.+++.++++.|+ +++++|+||+|.++.+.+. . .+...+.+ ..+++++++||||.|
T Consensus 158 ~~p~NPtG~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~-~~~~~~~~---------~~~~vi~~~S~SK~~ 224 (359)
T PRK03158 158 CNPNNPTGTYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--Y-PDTLPLLE---------KYENLIVLRTFSKAY 224 (359)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--c-ccHHHHHH---------hcCCEEEEEechHhh
Confidence 999999999999999999998875 6999999999998766433 1 22223333 236899999999999
Q ss_pred CCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC
Q 037587 276 SMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS 355 (464)
Q Consensus 276 g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 355 (464)
|++|+|+||+++++ .+.+.+......+.+++++|.++..++.+.++ .++.++.++++++.+.+.|.+.|+.+.++
T Consensus 225 g~~GlRiG~~v~~~-~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 299 (359)
T PRK03158 225 GLAALRVGYGIASE-ELIEKLNIARPPFNTTRIAQYAAIAALEDQAF----LKECVEKNAEGLEQYYAFCKEYGLFYYPS 299 (359)
T ss_pred cCcchhhehhcCCH-HHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCeeCCC
Confidence 99999999999954 45555655555567899999999999987654 56666777888888999998888888766
Q ss_pred CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 356 NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 356 ~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
. |+|+|++++. ...+++..++ ++||.|+||..|+ .++++||+++ ++++++.++++|+++
T Consensus 300 ~-g~~i~~~~~~--------~~~~~~~~l~-~~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 300 Q-TNFIFVDTGR--------DANELFEALL-KKGYIVRSGAALG--FPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred c-CcEEEEECCC--------CHHHHHHHHH-HCCeEEeeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 5 5699999852 1235777776 5799999999986 3679999998 689999999999875
No 78
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=3.3e-46 Score=376.98 Aligned_cols=354 Identities=19% Similarity=0.268 Sum_probs=266.1
Q ss_pred ceEEeecccccccHH-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHH-HHHHHcCCCCCCCCC--cE
Q 037587 37 GIIQMGLAENQLSFD-LLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVK-LMARIRGNKVKFDPN--KL 112 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~-~~~~~~~~~~~~~~~--~i 112 (464)
++|+|+.++..++++ .+.++.... .. ..|+++.|..++++++++ ++++.++.. ..+++ +|
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~-------------~~--~~Y~~p~g~~~~~e~iv~~y~~~~~~~~-~~~~~~~~V 158 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGI-------------IG--DNYPVPDRMLPHSEKIVHQYLIQEMCGN-KPPPGEFDL 158 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHh-------------hc--CCCCCCCCCHHHHHHHHHHHHHhhccCC-CCCCCcCeE
Confidence 578999998888754 444433321 11 269877787888888885 666554321 12334 89
Q ss_pred EEeCChHHHHHHHHHH-----hcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCC-----cccCHHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFC-----LADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNG-----FRITISALENAYQ 181 (464)
Q Consensus 113 ~it~G~~~al~~~~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~-----~~~d~~~l~~~i~ 181 (464)
++|+|+++++..++.+ ++.|||+|++++|+|+.|...+... .|++++.++++++++ |.+|.+++++++.
T Consensus 159 ~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~ 238 (521)
T TIGR03801 159 FAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD 238 (521)
T ss_pred EEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC
Confidence 9999999999999887 7899999999999999998876542 278888888865433 9999999988654
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEeccccccccCCCCCCccchhhhhhccCcCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (464)
+ ++|+|+++|||||||.++|.+++++|+++|+++ +++||+||+|.++.+ . +.++.+..
T Consensus 239 ~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~---~~sl~~~~--------- 298 (521)
T TIGR03801 239 P------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--D---FRSLFAEL--------- 298 (521)
T ss_pred C------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--c---ccchhhhC---------
Confidence 3 899999999999999999999999999999986 899999999998543 2 24544432
Q ss_pred CCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHH------------HH------------------------HHhcc--
Q 037587 260 DLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS------------AA------------------------TKMSS-- 301 (464)
Q Consensus 260 ~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~------------~~------------------------~~~~~-- 301 (464)
.+++++++||||.||++|||+||++++++.+.+ .+ ++...
T Consensus 299 --~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~ 376 (521)
T TIGR03801 299 --PYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNH 376 (521)
T ss_pred --CCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhc
Confidence 268999999999999999999999997653211 11 11111
Q ss_pred cCCCChHHHH--H---HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc---CC
Q 037587 302 FGLVSSQTQY--L---LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS---NT 373 (464)
Q Consensus 302 ~~~~s~~~q~--~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~---~~ 373 (464)
...++++.|. + +.++++.. ..+.+++++.+++|++.+.+.| ...+...+++|++|+|++++..... ..
T Consensus 377 ~~g~s~p~Q~q~al~a~~all~~~---~~y~~~~~~~~~~R~~~l~~~L-g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~ 452 (521)
T TIGR03801 377 TAGLSTPQQVQMALFSLFALMDKE---NAYKAETKDICRRREKLLFRGL-GLPLQEDPNDVAYYTLIDLEEWAEKNYGEE 452 (521)
T ss_pred cCCCCcHHHHHHHHHHHHHHhccc---hhHHHHHHHHHHHHHHHHHHhc-CCCCcCCCCCeEEEEEeehHHHHHHhcchH
Confidence 1234566665 3 44555432 4578889999999999999888 2223345789999999999853210 00
Q ss_pred -------hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 374 -------FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 374 -------~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
...+.+++.+|++++||.+.||..|+.. .+++|||++..+++++.++.++|+++++++.
T Consensus 453 f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~-~~~vRisla~l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 453 FSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGP-EWSVRVSLANLNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred HHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCC-CCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 0134579999999999999999999863 5689999987789999999999999997764
No 79
>PLN02368 alanine transaminase
Probab=100.00 E-value=7e-46 Score=369.61 Aligned_cols=285 Identities=21% Similarity=0.399 Sum_probs=232.0
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChhhhcccCC
Q 037587 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGFDRDLKWRP 154 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~~ 154 (464)
....|++..|.++||++||+++++.+| +.+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...+...
T Consensus 99 ~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~- 175 (407)
T PLN02368 99 GLGAYSDSRGLPGVRKEVAEFIERRDG--YPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLL- 175 (407)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHc-
Confidence 356899999999999999999988766 55789999999999999999999987 79999999999999999998877
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
|++++.++++++++|.+|++.+++.+++....+.++++++++|||||||.++|.+++++|+++|++++++||+||+|.++
T Consensus 176 g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l 255 (407)
T PLN02368 176 GGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQN 255 (407)
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 99999999987778999999999998753333347899999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEe--cCHHHHHHHHHhc-ccCCCChHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYS--NNERVVSAATKMS-SFGLVSSQTQ 310 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~--~~~~~~~~~~~~~-~~~~~s~~~q 310 (464)
.|++.. .+.++.++..++.. ..+..+++++++||||+| |++|||+||+++ .++.+.+.+.+.. ..++++.++|
T Consensus 256 ~y~~~~-~~~s~~~~~~~~~~--~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~~~Q 332 (407)
T PLN02368 256 IYQDER-PFISAKKVLMDMGP--PISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNVSGQ 332 (407)
T ss_pred ccCCCC-CcccHHHHHhhhcc--cccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCcHHH
Confidence 886521 34465554322200 000135899999999998 899999999984 2444555454443 3456788999
Q ss_pred HHHHHHcCCch----hh---HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecC
Q 037587 311 YLLSRMLSDKK----FT---CNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMR 366 (464)
Q Consensus 311 ~~~~~~l~~~~----~~---~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~ 366 (464)
.++..+++++. .. .+..++.++.+++|++.+.+.|.++ |+.+.+|+|+||+|++++
T Consensus 333 ~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 333 IFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred HHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99999998542 11 2333556889999999999999997 999999999999997664
No 80
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-46 Score=368.12 Aligned_cols=320 Identities=20% Similarity=0.350 Sum_probs=258.7
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
.+.|+|+.|+|+++++.. + . .....+||+... .+|+++++++++ +++++|++|
T Consensus 28 ~~~~~l~~Nenp~~~~~~---~-~--------------~~~~~~Yp~~~~-~~l~~~~a~~~g--------~~~~~I~~~ 80 (351)
T PRK01688 28 NGDVWLNANEYPTAVEFQ---L-T--------------QQTLNRYPECQP-KAVIENYAAYAG--------VKPEQVLVS 80 (351)
T ss_pred CCceEecCCCCCCCCChh---h-c--------------ccccccCCCCCh-HHHHHHHHHHhC--------CCHHHEEEc
Confidence 356999999999976421 1 1 134678988754 899999999986 789999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 116 AGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+|+++++.+++.+++++| |.|+++.|+|+.|...++.. |++++.+++++ +|.+|++.+++++ + ++++|+
T Consensus 81 ~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~-G~~~~~v~~~~--~~~~d~~~l~~~~-~------~~~lv~ 150 (351)
T PRK01688 81 RGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVEIRTVPTLD--NWQLDLPAIADNL-D------GVKVVY 150 (351)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHHhc-c------CCcEEE
Confidence 999999999999999997 89999999999998888876 99999999863 5889999998876 2 688999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.+++.+++++|++.|++ +.+||+||+|.++. .. .+...++. ..+++++++||||+
T Consensus 151 l~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~--~~----~s~~~~~~---------~~~n~iv~rSfSK~ 214 (351)
T PRK01688 151 VCSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFC--PQ----ASLAGWLA---------EYPHLVILRTLSKA 214 (351)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcC--CC----CChHHHHh---------hCCCEEEEecchHh
Confidence 99999999999999999999999976 67899999999853 22 23334444 23789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-e
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-C 352 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~ 352 (464)
||++|+|+||++++ +.+.+.+++....+.++.++|.++..+|.+.. .+++++.++.+.++++++.+.|+++ ++. +
T Consensus 215 ~glaGlRiGy~i~~-~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 291 (351)
T PRK01688 215 FALAGLRCGFTLAN-EEVINLLLKVIAPYPLSTPVADIAAQALSPQG--IAAMRERVAEINANRQWLIAALKEIPCVEQV 291 (351)
T ss_pred hcCHHHHHhHHhCC-HHHHHHHHhccCCCCCCHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 99999999999984 55666677777777788888988888888643 2456777788888899999999988 664 5
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
.++. ++|+|++++. ..++...|+ ++||.|+++..|. ..++|+||+++ ++++++.++++|
T Consensus 292 ~ps~-~nfi~~~~~~---------~~~l~~~L~-~~gi~vr~~~~~~-~~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 292 FDSE-TNYILARFTA---------SSAVFKSLW-DQGIILRDQNKQP-GLSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred CCCC-CcEEEEEcCC---------HHHHHHHHH-HCCeEEEECCCcC-CCCCeEEEeCC--CHHHHHHHHHhh
Confidence 5555 5699998862 124666665 6799999877653 23679999998 589999999887
No 81
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-45 Score=363.18 Aligned_cols=327 Identities=19% Similarity=0.296 Sum_probs=260.0
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
.+.++++.|+|+++++.. . ...+.+|+++. ..+||++||++++ +++++|++|
T Consensus 31 ~~~~~~~~ne~~~~~~~~-----~--------------~~~~~~Y~~~~-~~~lr~~ia~~~~--------~~~~~I~~t 82 (364)
T PRK04781 31 QGDVWLNANESAWANPAD-----P--------------DASTRRYPDPQ-PPGLRSALAALYG--------CAPEQLLIG 82 (364)
T ss_pred CCCEEeeCCCCCCCCChh-----h--------------cchhccCCCCC-HHHHHHHHHHHhC--------cChHHEEEe
Confidence 356999999999865321 0 12356898775 5999999999985 689999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 116 AGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+++++.+++.+++.+| |.|++++|+|+.|...++.. |++++.++++ ++++|.+|++++.+.+.. +++++|
T Consensus 83 ~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-----~~~~lv 156 (364)
T PRK04781 83 RGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQ-NAPLVEVPLVDGADGFHADVPAIVAAALA-----SNAKLV 156 (364)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCCCccCCCcCHHHHHHHHhc-----cCCeEE
Confidence 999999999999999999 79999999999887777766 9999999985 345678899888665432 378999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.+++.++++++++.|+ ++++||+||+|.++.+. . +...+.. ..+++++++||||
T Consensus 157 ~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~-~-----~~~~~~~---------~~~~vi~~~SfSK 220 (364)
T PRK04781 157 FLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDV-P-----SAVGLLA---------RYDNLAVLRTLSK 220 (364)
T ss_pred EEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCC-c-----chHHHHh---------hCCCEEEEecChh
Confidence 99999999999999999999999986 47899999999986532 1 2222333 2378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR- 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~- 351 (464)
+||+||+|+||++++ +.+.+.+.+....+.+++++|.++..++.++.+ . +..+.++.++++++.+.+.|+++ |+.
T Consensus 221 ~~gl~GlRvGy~v~~-~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~-~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 297 (364)
T PRK04781 221 AHALAAARIGSLIAN-AELIAVLRRCQAPYPVPTPCAALAEQALSAPAL-A-VTARRVAEVRAERERLHAALAQLPGVRR 297 (364)
T ss_pred hcccccceeeeeeCC-HHHHHHHHhccCCCCCCHHHHHHHHHHHhcccH-H-HHHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 999999999999995 456676777776777899999999999988643 2 34444556788999999999988 664
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+. +.+|+|+|++++. ..++...+ .++||.|+||..|.. .++|+||+++ ++++++.++++|+++.
T Consensus 298 ~~-p~~g~f~~~~~~~---------~~~~~~~l-~~~gI~v~~~~~~~~-~~~~~Ris~~--~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 298 VY-PSQGNFLLVRFDD---------AEAAFQAL-LAAGVVVRDQRAAPR-LSDALRITLG--TPEQNDRVLAALQRTQ 361 (364)
T ss_pred EC-CCCCcEEEEEcCC---------HHHHHHHH-HHCCeEEeeCCCCCC-CCCeEEEeCC--CHHHHHHHHHHHHHHH
Confidence 44 4556899999862 12355554 578999999987753 4679999998 5889999999998754
No 82
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-44 Score=363.04 Aligned_cols=345 Identities=23% Similarity=0.437 Sum_probs=277.1
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
..+++|+.+.+.++ ++.+.+++...... . ......|++..|.+++|+++++++++.++ ..+++++|++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~------~---~~~~~~y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~ 101 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEE------E---DPGLHGYMPNAGYPEVREAIAESLNRRFG--TPLTADHIVM 101 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhc------C---CcCcccCCCCCCCHHHHHHHHHHHHHHhC--CCCCcCcEEE
Confidence 46799998866554 46666666553211 0 11256798889999999999999998766 3578999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||.|++++|+|..+...++.. |++++.++++++ +|.+|++++++.+++ ++++|+
T Consensus 102 t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~-g~~v~~v~~~~~-~~~~d~~~l~~~~~~------~~~~v~ 173 (394)
T PRK06836 102 TCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNH-GGKLVVVPTDTD-TFQPDLDALEAAITP------KTKAVI 173 (394)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEEecCCc-cCcCCHHHHHhhcCc------CceEEE
Confidence 999999999999999999999999999999998888766 999999998753 478999999998864 789999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhh------CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKS------KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~------~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
+++||||||.++|.+++++|+++|++ |+++||+||+|.++.|++. ...++. . ..++++++
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~---~---------~~~~~i~~ 239 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGA--EVPYIF---K---------YYDNSIVV 239 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCC--CCCChH---H---------ccCcEEEE
Confidence 99999999999999999999999998 8999999999999877643 223322 2 22689999
Q ss_pred cCCCcCCCCCccEEEEEEecCHHHHHH---HHH---h---cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMIYSNNERVVSA---ATK---M---SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKE 339 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l~~~~~~~~~~---~~~---~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (464)
+||||.||+||+|+||+++++. +.+. ... . ..++.++++.|.++..++.+.. .+..++++++
T Consensus 240 ~S~SK~~~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~--------~~~~~~~~r~ 310 (394)
T PRK06836 240 YSFSKSLSLPGERIGYIAVNPE-MEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATV--------DVSIYKRNRD 310 (394)
T ss_pred ecchhhccCcceeeEEEecCHH-HhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChH--------HHHHHHHHHH
Confidence 9999999999999999999654 3221 111 1 1224577889999999998742 2456777889
Q ss_pred HHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHH
Q 037587 340 MLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQ 419 (464)
Q Consensus 340 ~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~ 419 (464)
.+.+.|+++|+.+.++++|+|+|++++.. ...+++.. +.++||.|+||..|+. ++++||+++ .++++++
T Consensus 311 ~l~~~L~~~g~~~~~~~gg~~~~~~~~~~-------~~~~~~~~-l~~~gv~v~~g~~f~~--~~~iRi~~~-~~~~~~~ 379 (394)
T PRK06836 311 LLYDGLTELGFECVKPQGAFYLFPKSPEE-------DDVAFCEK-AKKHNLLLVPGSGFGC--PGYFRLSYC-VDTETIE 379 (394)
T ss_pred HHHHHHHhCCCEeecCCceEEEEEeCCCC-------CHHHHHHH-HHhCCEEEECchhcCC--CCeEEEEec-CCHHHHH
Confidence 99999999999999999999999998752 12346654 4678999999999863 579999998 5899999
Q ss_pred HHHHHHHHHHHhhC
Q 037587 420 VALQRIKVFAQSCN 433 (464)
Q Consensus 420 ~~l~~l~~~l~~~~ 433 (464)
+++++|+++++++.
T Consensus 380 ~~i~~l~~~l~~~~ 393 (394)
T PRK06836 380 RSLPAFEKLAKEYK 393 (394)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998765
No 83
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-45 Score=363.85 Aligned_cols=337 Identities=20% Similarity=0.267 Sum_probs=268.4
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
..|+|+.|+|+++ ++.+.+++.+..... ......|++ .|.++||++||+++++.++ .++++++|++|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~---------~~~~~~Y~~-~g~~~lr~aia~~~~~~~~--~~~~~~~I~it 94 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEA---------AAGLNRYPD-RDAVALRADLAAYLTAQTG--VGLTVENVWAA 94 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhh---------hhhhccCCC-CchHHHHHHHHHHhhhhcc--CCCChhhEEEC
Confidence 4699999999995 467777776642110 123567876 4789999999999988766 45789999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
+|+++++..++.+++++||.|+++.|+|+.|...+... |.+++.++.+ ++|.+|++.+++++.+ .+++++++
T Consensus 95 ~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~-----~~~~~i~l 166 (368)
T PRK03317 95 NGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGT-HTEWVEGPRA--ADFTLDVDAAVAAIAE-----HRPDVVFL 166 (368)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhc-CCeeEEcccC--CCCCCCHHHHHHHHhc-----cCCCEEEE
Confidence 99999999999999999999999999999998888766 9998888764 4688999999998864 26788999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
+|||||||.+++.+++++|+++| ++++|+||+|.++.+.+. .+...+.+ ..+++++++||||+|
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~~----~~~~~~~~---------~~~~~i~~~SfSK~~ 230 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSGT----PSALTLLP---------EYPRLVVSRTMSKAF 230 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccCC----cCHHHHHH---------hCCCEEEEEechhhh
Confidence 99999999999999999999877 689999999998655433 23333433 225899999999999
Q ss_pred CCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC
Q 037587 276 SMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS 355 (464)
Q Consensus 276 g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 355 (464)
|++|+|+||++++ +.+.+.+......+.+++++|.++.+++++.+. +.+.++.++++++.+.+.|++.|+.+.++
T Consensus 231 g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 305 (368)
T PRK03317 231 AFAGGRLGYLAAA-PAVVDALRLVRLPYHLSAVTQAAARAALRHADE----LLASVAALRAERDRVVAWLRELGLRVAPS 305 (368)
T ss_pred ccchhhhhhhhCC-HHHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHH----HHHHHHHHHHHHHHHHHHHHHCCCEeCCC
Confidence 9999999999995 456566655555566889999999999986432 33445667888899999999999998889
Q ss_pred CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 356 NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 356 ~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++++++|.+++. ..+++..++ ++||.|+++. .++++||+++ ++++++.++++|+++++.
T Consensus 306 ~~~~~~~~~~~~---------~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 306 DANFVLFGRFAD---------RHAVWQGLL-DRGVLIRDVG-----IPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CCcEEEEeccCC---------HHHHHHHHH-HCCEEEEeCC-----CCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 999888876531 124556554 6799998742 2579999998 578899999999988764
No 84
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-44 Score=361.75 Aligned_cols=329 Identities=22% Similarity=0.252 Sum_probs=257.6
Q ss_pred cccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC
Q 037587 75 RELALFQDYHGFPDAKKELVKLMARIRGNKVK-FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR 153 (464)
Q Consensus 75 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~ 153 (464)
.....|+++.|.++||+++++++.+..+ ... .+.++|++|+|+++++.+++.+++++||.|++++|+|+.|...+...
T Consensus 35 ~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~ 113 (388)
T PRK08637 35 DEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTR 113 (388)
T ss_pred ccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHh
Confidence 3457899999999999999999875432 111 12368999999999999999999999999999999999998875432
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh-----CCeEEEEe
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS-----KRIHIVSD 228 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~-----~~~~lI~D 228 (464)
.|++++.+++.. +++.+|++.+++.++.. ..+..++++++|||||||.++|.+++++|+++|++ ++++||+|
T Consensus 114 ~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~--~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 114 RGAEIVTYPIFD-EDGGFDTDALKEALQAA--YNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred cCCEEEEecccC-CCCcCCHHHHHHHHHhh--ccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 399999999842 23468999999988621 11244567888999999999999999999998875 89999999
Q ss_pred ccccccccCCCCCCccchh-hhhhccCcCCCCCCCCcE--EEEcCCCcCCCCCccEEEEEEecC-----HHHHHHHHH-h
Q 037587 229 EIYSGTVFDSPSSSFISIM-EAVMDRNIDESDDLWSRI--HIVYSLSKDFSMPGFRVGMIYSNN-----ERVVSAATK-M 299 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~v--i~l~S~SK~~g~~GlRiG~l~~~~-----~~~~~~~~~-~ 299 (464)
|+|.++.|++. ...++. .+.+ ..+++ ++++||||.|++||+|+||++++. +.+.+.+.+ .
T Consensus 191 e~Y~~l~~~~~--~~~~~~~~~~~---------~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~ 259 (388)
T PRK08637 191 DAYFGLFYEDS--YKESLFAALAN---------LHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKV 259 (388)
T ss_pred ccchhcccCCc--cchhhHHHhhc---------ccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHH
Confidence 99999877654 323332 2222 22564 445699999999999999998643 455444432 1
Q ss_pred -----cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccc
Q 037587 300 -----SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLV 370 (464)
Q Consensus 300 -----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~ 370 (464)
...+.+|.+.|.++..++.++.+ .+++++.+..++++++.+.+.|+.. ++.+.++++|+|+|++++.
T Consensus 260 ~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--- 335 (388)
T PRK08637 260 KGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--- 335 (388)
T ss_pred HHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh---
Confidence 13346789999999999998877 6777788888999999999988765 5788889999999999972
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+..+++..+++++||.+.+. .++++||+++..+++++++++++|++++++.
T Consensus 336 ----~~~~~l~~~l~~~~gv~~~~~------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 ----VDAEELRVHLLEKYGIGTIAL------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ----HHHHHHHHHHhhhcceEEEec------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 123468888877889998742 2568999999878999999999999999865
No 85
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-45 Score=359.26 Aligned_cols=326 Identities=19% Similarity=0.292 Sum_probs=258.6
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|||+.|+|+++ ++.+.+++.+.. .+...|+++.|..+||+++|++++ +++++|+
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~Y~~~~g~~~lr~aia~~~~--------~~~~~I~ 79 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARL-------------GDLAAYPSTEDERRARAAVAARHG--------RTPDEVL 79 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHh-------------hHhhcCCCccchHHHHHHHHHHhC--------cChhhEE
Confidence 457899999999885 566777776642 335679988899999999999985 6899999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++.+++. +.+| .++++.|+|..+...++.. |++++.++++. +|.+|++.+. + +++++
T Consensus 80 it~Ga~~al~~~~~--l~~~-~viv~~P~y~~~~~~~~~~-G~~i~~v~~~~--~~~~d~~~l~----~------~~~~i 143 (349)
T PRK07908 80 LLAGAAEGFALLAR--LRPR-RAAVVHPSFTEPEAALRAA-GIPVHRVVLDP--PFRLDPAAVP----D------DADLV 143 (349)
T ss_pred ECCCHHHHHHHHHh--cCCC-eEEEeCCCChHHHHHHHHc-CCEEEeeccCc--ccCcChhHhc----c------CCCEE
Confidence 99999999999988 4664 5778899999998888776 99999999874 3778887543 2 67899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.++|.+++.++ |+ ++.++|+||+|.++.. +. ..++... ..+++++++||||
T Consensus 144 ~l~np~NPTG~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~-~~---~~~l~~~-----------~~~~~i~i~S~SK 204 (349)
T PRK07908 144 VIGNPTNPTSVLHPAEQLLAL---RR-PGRILVVDEAFADAVP-GE---PESLAGD-----------DLPGVLVLRSLTK 204 (349)
T ss_pred EEcCCCCCCCCCcCHHHHHHH---Hh-cCCEEEEECcchhhcc-CC---ccccccc-----------cCCCEEEEeeccc
Confidence 999999999999998876555 44 4778888999998633 22 2333222 2367999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL 353 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 353 (464)
.||++|+|+||++++ +.+.+.+......+.++++.|.++..++.+.. .+++++.++.++++++.+.+.|+++|+++.
T Consensus 205 ~~~l~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 281 (349)
T PRK07908 205 TWSLAGLRVGYALGA-PDVLARLTRGRAHWPVGTLQLEAIAACCAPRA--VAEAAADAARLAADRAEMVAGLRAVGARVV 281 (349)
T ss_pred ccCCccceeeeeecC-HHHHHHHHhcCCCCCccHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHHHHHHHHhCCcEec
Confidence 999999999999985 44555566555556678888888888877432 456788889999999999999998888888
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++.+|+|+|++++. . +.+..+++++||.|+||..|+...+++|||+++ +++++++++++|++++..
T Consensus 282 ~p~~g~~~~~~~~~---------~-~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 282 DPAAAPFVLVRVPD---------A-ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILKA 347 (349)
T ss_pred cCCCceEEEEECCc---------H-HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHhc
Confidence 88889999999974 1 234445578899999999986545789999997 688999999999887653
No 86
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3.5e-45 Score=362.70 Aligned_cols=326 Identities=18% Similarity=0.253 Sum_probs=261.2
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+|+++ ++.+.+++.+.. .....|++.. ..+||++|+++++ +++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~~-~~~Lr~aia~~~~--------v~~e~I~i 100 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSA-------------ALSGRYDLEL-EDDLRTLFAAQEG--------LPADHVMA 100 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHH-------------HHhcCCCCch-HHHHHHHHHHHhC--------cChhhEEE
Confidence 57899999999985 566666665531 2234687664 7999999999875 78999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||+|++++|+|+.|...++.. |++++.+++++ +|.+|++.+++.. +++++++
T Consensus 101 t~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~-------~~~~~v~ 170 (370)
T PRK09105 101 YAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQ-GAPVAKVPLRA--DGAHDVKAMLAAD-------PNAGLIY 170 (370)
T ss_pred cCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHhcC-------CCCCEEE
Confidence 999999999999999999999999999999998888877 99999999864 5778998887652 2678899
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.++++++++.++ +++++|+||+|.+ |... .+...+.+ ..+++++++||||+
T Consensus 171 l~nP~NPTG~~~~~~~l~~l~~~~~-~~~~lIvDEaY~~--f~~~----~s~~~~~~---------~~~~vi~~~SfSK~ 234 (370)
T PRK09105 171 ICNPNNPTGTVTPRADIEWLLANKP-AGSVLLVDEAYIH--FSDA----PSVVDLVA---------QRKDLIVLRTFSKL 234 (370)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHhCC-CCcEEEEECchHH--hccC----cchHHHHh---------hCCCEEEEecccHh
Confidence 9999999999999999999999764 5899999999986 4322 23333433 33789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK 354 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 354 (464)
||++|+|+||+++++ .+.+.+... ..+.++.+.|.++..++.+.+ ++++.++.++++++.+.+.|+++|+++.+
T Consensus 235 ~g~~GlRiG~~v~~~-~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~~----~~~~~~~~~~~~r~~l~~~L~~~g~~~~~ 308 (370)
T PRK09105 235 YGMAGMRLGLAAARP-DLLAKLARF-GHNPLPVPAAAAGLASLRDPK----LVPQRRAENAAVREDTIAWLKKKGYKCTP 308 (370)
T ss_pred hcCCccceeeeecCH-HHHHHHHhc-CCCCcCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence 999999999999954 455555555 445578888999888888744 47778888999999999999999999888
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+++++| +++++. +..+++..|+ ++||.| +..|. ..++|+||+++ +++++++++++|+++++
T Consensus 309 ~~~~f~-~~~~~~--------~~~~l~~~L~-~~gI~v--~~~~~-~~~~~~Ris~~--~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 309 SQANCF-MVDVKR--------PAKAVADAMA-KQGVFI--GRSWP-IWPNWVRVTVG--SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred CCCcEE-EEeCCC--------CHHHHHHHHH-HCCcEE--ecCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHHhh
Confidence 888865 577752 1235777776 559998 33453 24689999998 57889999999988763
No 87
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=8.1e-45 Score=366.90 Aligned_cols=356 Identities=19% Similarity=0.289 Sum_probs=262.5
Q ss_pred CceEEeecccccc-c--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 36 SGIIQMGLAENQL-S--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
.++|+|+.+.+.. + .+.+.++++..... . ........|++..|.++||++||+++.+.+| +.+++++|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g--~~v~~~~I 100 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLAS------G-KLTEALGNYDGPQGKDELIEALAALLNERYG--WNISPQNI 100 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcC------c-ccccccccCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhE
Confidence 4679999876543 2 23455555442110 0 0012346799999999999999999988776 55789999
Q ss_pred EEeCChHHHHHHHHHHhcC-----CCCeEEE-cCCCCCChhhhcccC---CCcEEEEEecCCCC-CcccCHHHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFCLAD-----PGDAFLL-PTPYYPGFDRDLKWR---PGVEIVPIHCSSSN-GFRITISALENAYQQ 182 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~---~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~ 182 (464)
++|+|+++++.+++.+++. +||.|++ ++|+|+.|...+... .+..+..++++.++ +|.+|++.|+ +.
T Consensus 101 ~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~- 177 (416)
T PRK09440 101 ALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID- 177 (416)
T ss_pred EEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-
Confidence 9999999999999999985 5899999 799999988754322 01222223333211 4778998886 22
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (464)
.++++++++|||||||.++|.+++++|+++|++++++||+||+|.+. +... .+.+ ..+. ..
T Consensus 178 -----~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~--~~~~---~~~~--------~~ 238 (416)
T PRK09440 178 -----EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-FPGI--IFSE---ATPL--------WN 238 (416)
T ss_pred -----CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCc--chhh---cCcc--------cc
Confidence 26789999999999999999999999999999999999999999753 1111 1111 1110 13
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHH-HHHHHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKE-NRKRLRKRKE 339 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 339 (464)
+++++++||||. ++||+|+||+++++ .+.+.+...... .+++.+.|.++..++.++++ .++..+ .+..++++++
T Consensus 239 ~~vI~~~SfSK~-~~pGlRiG~~i~~~-~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~ 315 (416)
T PRK09440 239 PNIILCMSLSKL-GLPGVRCGIVIADE-EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQ 315 (416)
T ss_pred CCeEEEeccccc-CCCcceEEEEeCCH-HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHH
Confidence 789999999996 89999999999955 455555444432 35788999999999999887 455544 6778888888
Q ss_pred HHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC-------CCeEEE
Q 037587 340 MLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE-------PGWFRI 408 (464)
Q Consensus 340 ~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~-------~~~~Ri 408 (464)
.+.+.|.+. ++.+.+|++|+|+|++++.... .+.+++..+ .++||.|+||+.|+... .+++||
T Consensus 316 ~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~-----~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRi 389 (416)
T PRK09440 316 LAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPI-----TTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRM 389 (416)
T ss_pred HHHHHHHHhcccCCeEEecCCCceEEEEECCCCCC-----CHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEE
Confidence 888888764 4566788999999999985210 123466655 57899999999986421 358999
Q ss_pred EeecCCHHHHHHHHHHHHHHHHhh
Q 037587 409 CFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 409 s~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
+++. +++++++++++|++++++.
T Consensus 390 s~~~-~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 390 NYVQ-DDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred EecC-CHHHHHHHHHHHHHHHHHH
Confidence 9985 7999999999999998764
No 88
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-45 Score=360.74 Aligned_cols=334 Identities=16% Similarity=0.208 Sum_probs=265.6
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
..+|+|+.|+|+++ ++.+.+++.+.. .....|++. +..+||++||++++ +++++|++
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~Y~~~-~~~~Lr~~ia~~~~--------~~~~~I~i 89 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAA-------------AEIWKYGDP-ENHDLRHALAAHHG--------VAPENIMV 89 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHH-------------HHhhcCCCC-ccHHHHHHHHHHhC--------CCHHHEEE
Confidence 35579999999986 456666665531 234578876 46999999999985 78899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||.|++++|+|+.+...+... |.+++.+|++.+ .+|++.+++.+.. .++++++
T Consensus 90 t~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~vp~~~~---~~~~~~l~~~~~~-----~~~~~i~ 160 (369)
T PRK08153 90 GEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGF-GGRLVTVPYRDD---REDLDALLDAARR-----ENAPLVY 160 (369)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHHHHHHc-CCeEEEeeCCCC---CCCHHHHHHHhcc-----cCCcEEE
Confidence 999999999999999999999999999999998877766 999999998532 4688888776542 2688999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++++++|++ +++||+||+|.++.+.+. +.+ +.. ..+++++++||||+
T Consensus 161 l~~P~NPtG~~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~---~~~---~~~---------~~~~~i~~~SfSK~ 224 (369)
T PRK08153 161 LANPDNPMGSWHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGA---APP---IDT---------DDPNVIRMRTFSKA 224 (369)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCccc---chh---hhh---------cCCCEEEEecchHh
Confidence 99999999999999999999998874 899999999998655332 122 211 23689999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK 354 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 354 (464)
||++|+|+||+++++ .+.+.+.+....+++++++|.++..++++.++ +++.++.++++++.+.+.|++.|+.+.+
T Consensus 225 ~g~~GlRiG~~v~~~-~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~~~~~L~~~g~~~~p 299 (369)
T PRK08153 225 YGLAGARVGYAIGAP-GTIKAFDKVRNHFGMNRIAQAAALAALKDQAY----LAEVVGKIAAARDRIAAIARANGLTPLP 299 (369)
T ss_pred ccCcchheeeeecCH-HHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 999999999999954 45555555555667899999999999987544 6777888899999999999988887664
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe-CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS-PGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~-pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+++|+|++++... ....++++.++ ++||.|+ |+... .++++||+++ ++++++.++++|++++.+.+
T Consensus 300 -~~~~f~~~~~~~~~-----~~a~~l~~~l~-~~Gi~v~~p~~~~---~~~~iRis~~--~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 300 -SATNFVAIDCGRDG-----AFARAVLDGLI-ARDIFVRMPGVAP---LDRCIRVSCG--PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred -CcCcEEEEECCCCc-----ccHHHHHHHHH-HCCeEEeeCCCCC---CCCeEEEecC--CHHHHHHHHHHHHHHHHHhh
Confidence 56679999986210 11235666665 5799996 66421 3579999998 68999999999999987654
No 89
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-45 Score=359.65 Aligned_cols=329 Identities=20% Similarity=0.274 Sum_probs=263.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i 112 (464)
+.++|+|+.|+|+++ ++.+.+++.+... ...+..|++ .|..+||+++|++++ +.+ ++|
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~Y~~-~~~~~lr~~ia~~~~--------~~~~~~I 84 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLA-----------EVALNRYPD-PRAAALKAALRAAMG--------VPAGADV 84 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhh-----------ccccccCCC-CCHHHHHHHHHHHhC--------cCCCCcE
Confidence 467899999999985 5667777665321 023567987 477999999999986 333 589
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||+|++++|+|..+...++.. |++++.+++++ +|.+|++.+++.+.+ .++++
T Consensus 85 ~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~i~~~~--~~~~d~~~l~~~~~~-----~~~~~ 156 (356)
T PRK04870 85 LLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLA-GLEFVGVPLTA--DFTLDLPAMLAAIAE-----HRPAL 156 (356)
T ss_pred EEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhhc-----CCCCE
Confidence 99999999999999999999999999999999998888776 99999999863 578999999998853 27899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|+++|||||||.++|.+++++|+++| +.++|+||+|.++.+ . .+.+ ... ..+++++++|||
T Consensus 157 v~l~~p~NPtG~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~--~--~~~~---~~~---------~~~~vi~~~S~S 217 (356)
T PRK04870 157 VFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQPFAG--D--SWLP---RLA---------RFPNLLVMRTVS 217 (356)
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHC---CCEEEEECCchhhcC--c--chHH---HHh---------hCCCEEEEecch
Confidence 99999999999999999999999998 678999999987532 2 1111 122 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
| +|++|+|+||+++++ .+.+.+......+.++.++|.++..++++.++ +++.++.++++++.+.+.|+++ |+.
T Consensus 218 K-~~~~GlRiG~~i~~~-~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~ 291 (356)
T PRK04870 218 K-LGLAGLRLGYLAGHP-AWIAELDKVRPPYNVNVLTQATALFALEHVDV----LDAQAAQLRAERTRLAAALAALPGVT 291 (356)
T ss_pred h-hhhHHHhhhhhhCCH-HHHHHHHHccCCCcCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 9 899999999999954 45555655555566888999998888876433 6667778889999999999987 887
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+.++ +|+|+|++++. ..+++.. +.++||.|+||..|+...++++||+++ +.++++.++++|++++
T Consensus 292 ~~~~-~~~~~~~~~~~---------~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 292 VFPS-AANFILVRVPD---------AAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVG--TPEENAQFLAALKAAL 356 (356)
T ss_pred ECCC-CCeEEEEECCC---------HHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCC--CHHHHHHHHHHHHHhC
Confidence 7654 45699999871 1235544 568899999999987555789999998 5889999999998753
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-44 Score=354.83 Aligned_cols=348 Identities=18% Similarity=0.285 Sum_probs=271.3
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
++.++|+|+.++|+++ ++.+.+++...... .....|++..|.+++|+++|++++ +++++|
T Consensus 26 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~l~--------~~~~~v 86 (380)
T PRK06225 26 KDKEMIWMGQNTNHLGPHEEVREAMIRCIEE-----------GEYCKYPPPEGFPELRELILKDLG--------LDDDEA 86 (380)
T ss_pred hcCCeEEccCCCCCCCCCHHHHHHHHHHHhc-----------CCCCCCCCCcchHHHHHHHHHhcC--------CCCCcE
Confidence 3567899999999885 46666666654211 224578888899999999999985 678899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++|+|+++++..++++++.+||.|++++|+|..+...+... |++++.++++ .+++|.+|++.+++.+.+ +++
T Consensus 87 ~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~ 159 (380)
T PRK06225 87 LITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRF-GAEVIEVPIYSEECNYKLTPELVKENMDE------NTR 159 (380)
T ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHh-CceEEeeccccccCCccCCHHHHHhhcCC------Cce
Confidence 99999999999999999999999999999999887777766 9999999974 344688999999988754 788
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+++++|||||||.++|.+++++|+++|+++|+++|+||+|.++... . .....+ ..++++++.||
T Consensus 160 ~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~----~~~~~~-----------~~~~~i~~~s~ 223 (380)
T PRK06225 160 LIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE-H----TLAAEY-----------APEHTVTSYSF 223 (380)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc-C----Cchhhc-----------CCCCEEEEeec
Confidence 9999999999999999999999999999999999999999875322 1 122222 23689999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G 349 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g 349 (464)
||.||++|+|+||++++++ +.+.+.... ..++.+.++|.++..++... .++.++.++.++++++.+.+.|+++ |
T Consensus 224 SK~~g~~G~RiG~i~~~~~-l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 224 SKIFGMAGLRIGAVVATPD-LIEVVKSIVINDLGTNVIAQEAAIAGLKVK---DEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred hhhcCCccceeEEEecCHH-HHHHHHHHHhcccCCCHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 9999999999999999654 555544432 23457788998888887653 3446666777778888888888874 5
Q ss_pred Cee-ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 350 IRC-LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 350 ~~~-~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.+ ..+.+|+|+|++++... ....+++..+. ++||.|+||..|+.. +++++|++++. +++++++++++|++
T Consensus 300 ~~~~~~~~~g~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~ 372 (380)
T PRK06225 300 VFLPVYPSHGNMMVIDISEAG-----IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPD 372 (380)
T ss_pred CccccCCCCCeEEEEEccccc-----CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHH
Confidence 432 23345678999986421 11235677765 779999999766532 35799999985 88999999999999
Q ss_pred HHHhhCc
Q 037587 428 FAQSCNP 434 (464)
Q Consensus 428 ~l~~~~~ 434 (464)
++++.+.
T Consensus 373 ~~~~~~~ 379 (380)
T PRK06225 373 VVETLRT 379 (380)
T ss_pred HHHHhhc
Confidence 9987653
No 91
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-44 Score=354.07 Aligned_cols=326 Identities=19% Similarity=0.303 Sum_probs=257.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+|+++ ++.+.+++.+... .....|++. |..+||++||++++ +++++|++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~------------~~~~~y~~~-~~~~lr~aia~~~~--------~~~~~I~i 82 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALG------------DDLRLYPDP-NADALRQAIAAYYG--------LDPEQVFV 82 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhh------------hhhhcCCCC-cHHHHHHHHHHHhC--------CCHHHEEE
Confidence 57899999999986 5677777765321 234678766 55999999999985 68999999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++.+++++++++||.|++++|+|+.|...++.. |++++.+++++ +|.+|++++++ ..++++
T Consensus 83 t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~----------~~~~v~ 149 (353)
T PRK05387 83 GNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLY-GIPYEEIPLDD--DFSIDVEDYLR----------PNGGII 149 (353)
T ss_pred cCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHc-CCEEEEeecCC--CCCCCHHHHHh----------cCCEEE
Confidence 999999999999999999999999999999888777766 99999999863 57889998863 346789
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++|+++++ ++++|+||+|.+ |.+. ...+ +.. ..+++++++||||.
T Consensus 150 ~~~P~NPtG~~~~~~~~~~l~~~~~--~~~livDe~y~~--~~~~--~~~~---~~~---------~~~~~i~~~S~SK~ 211 (353)
T PRK05387 150 FPNPNAPTGIALPLAEIERILAANP--DSVVVIDEAYVD--FGGE--SAIP---LID---------RYPNLLVVQTFSKS 211 (353)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC--CcEEEEeCcccc--cCCc--chHH---HHh---------hCCCEEEEEehhHh
Confidence 9999999999999999999998754 899999999986 4433 2122 222 22679999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcc---cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSS---FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
||++|+|+||++++ +.+.+.+..... .++++.+.|.++..++.+.++ .++.++.++++++.+.+.|++.|+.
T Consensus 212 ~~~~GlR~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~~ 286 (353)
T PRK05387 212 RSLAGLRVGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAY----FEETRAKVIATRERLVEELEALGFE 286 (353)
T ss_pred hcchhhhceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 99999999999985 445555554432 245788999999999987554 5667788888999999999999988
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++ +++|+|++++.. +..++++.+ .++||.|++.... ..++++||+++ ++++++.++++|++++.+
T Consensus 287 ~~~~-~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~~~~~--~~~~~iRis~~--~~~~~~~~~~~L~~~~~~ 353 (353)
T PRK05387 287 VLPS-KANFVFARHPSH-------DAAELAAKL-RERGIIVRHFNKP--RIDQFLRITIG--TDEEMEALVDALKEILAK 353 (353)
T ss_pred ECCC-cCcEEEEECCCC-------CHHHHHHHH-HHCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHHHhhC
Confidence 7654 557999998731 123567776 4679999854321 23679999998 579999999999988753
No 92
>PLN02397 aspartate transaminase
Probab=100.00 E-value=8.4e-44 Score=358.56 Aligned_cols=318 Identities=16% Similarity=0.219 Sum_probs=244.9
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc-----EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc
Q 037587 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK-----LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL 150 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-----i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~ 150 (464)
....|++..|.++||+++++++.+... ...++++ +++|+|+.+ +...+..++.|||+|++++|+|+.|...+
T Consensus 83 ~~~~Y~~~~G~~~LR~aia~~~~~~~~--~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~ 159 (423)
T PLN02397 83 RNKEYLPIEGLAEFNKLSAKLAYGADS--PAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIF 159 (423)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHcCCCC--chhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHH
Confidence 345799999999999999999864322 1122233 344555544 33344455569999999999999999999
Q ss_pred ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 151 KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 151 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
+.. |++++.+++...++|.+|++.+++.+.+. .++++++++++||||||.++|.+++++|+++|++++++||+||+
T Consensus 160 ~~~-g~~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~ 235 (423)
T PLN02397 160 RDA-GVPVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA 235 (423)
T ss_pred HHc-CCeEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc
Confidence 877 99999999843345889999998887642 23678888899999999999999999999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE--ecCHHHHH----HHHHhc--cc
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY--SNNERVVS----AATKMS--SF 302 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~--~~~~~~~~----~~~~~~--~~ 302 (464)
|.++.|++....+.++..+.. ..+++++++||||+|+++|||+||++ ++++.+.. .+.... ..
T Consensus 236 Y~~l~~~~~~~~~~~~~~~~~---------~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~ 306 (423)
T PLN02397 236 YQGFASGDLDADAQSVRMFVE---------DGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMY 306 (423)
T ss_pred cCCccCCchhhhhHHHHHHHh---------cCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhccc
Confidence 999877541002234333322 22579999999999999999999985 43433322 232322 23
Q ss_pred CCCChHHHHHHHHHcCCchhhHHH---HHHHHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChh
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNY---MKENRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFE 375 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~ 375 (464)
.+++.+.|.++..+|+++++.+.+ ++++++.++++++.+.+.|+++| +.+..|+||||+|++++.
T Consensus 307 ~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~~-------- 378 (423)
T PLN02397 307 SNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLNK-------- 378 (423)
T ss_pred CCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCCH--------
Confidence 346778999999999987543333 67889999999999999999987 787889999999998851
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+++.+|++++||.|.+ .+ ||+++.++++.+++++++|+++++
T Consensus 379 ---~~~~~Ll~~~~V~v~~--------~~--Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 379 ---EQVDRMTKEYHIYMTR--------DG--RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ---HHHHHHHHhCCEEECC--------CC--eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 4889999999999962 23 999987799999999999999985
No 93
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-44 Score=355.94 Aligned_cols=319 Identities=18% Similarity=0.321 Sum_probs=253.9
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
.++|+|+.|+|+++++.. + . .....+|++.. .++||+++|++++ +++++|++|
T Consensus 31 ~~~~~l~~ne~~~~~~~~---~-~--------------~~~~~~Yp~~~-~~~Lr~aia~~~~--------~~~~~I~it 83 (354)
T PRK04635 31 RGDIWINANESPFNNEYK---L-D--------------LARLNRYPECQ-PPELINAYSAYAG--------VAPEQILTS 83 (354)
T ss_pred CCcEEeeCCCCCCCCChh---h-h--------------hHHhccCCCCC-HHHHHHHHHHHhC--------cCHHHEEEe
Confidence 456999999999976521 1 1 13356898874 7999999999975 789999999
Q ss_pred CChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 116 AGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+|++++|.+++++++++| |.|+++.|+|+.|...++.. |++++.+|++. +|.+|++.++. + . ++++|+
T Consensus 84 ~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~-g~~v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~ 152 (354)
T PRK04635 84 RGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETF-NVGVKALPLTA--DYQLPLDYIEQ-L-D------GAKLVF 152 (354)
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHc-CCEEEEEecCC--CCCCCHHHHHh-c-c------CCCEEE
Confidence 999999999999999999 89999999999988877766 99999999863 57788888763 2 2 789999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.++++++++.|+ +++||+||+|.++. .. .+...+.. ..+++++++||||+
T Consensus 153 i~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~--~~----~s~~~~~~---------~~~~~iv~~S~SK~ 215 (354)
T PRK04635 153 ICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFC--PE----YSVADLLA---------SYPNLVVLRTLSKA 215 (354)
T ss_pred EeCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhc--cC----cchHHHHh---------hCCCEEEEechHHH
Confidence 9999999999999999999999876 48999999999753 22 23333433 23789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCL 353 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~ 353 (464)
||++|+|+||++++ +.+.+.+......++++.+.|.++.+++.+..+ +++++.++.++++++.+.+.|++++ +.+.
T Consensus 216 ~~l~GlRlG~~i~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 292 (354)
T PRK04635 216 FALAGARCGFTLAN-EELIEILMRVIAPYPVPLPVSEIATQALSEAGL--ARMKFQVLDLNAQGARLQAALSMYGGAKVL 292 (354)
T ss_pred hhhhHHHHhhhhCC-HHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCceEC
Confidence 99999999999995 445565555555566788889888888876542 3466777888999999999999885 7888
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++++ .|+|++++. ..++.. ++.++||.|+++..+ ..++++|||++ ++++++.++++|++
T Consensus 293 ~~~g-~f~~~~~~~---------~~~~~~-~l~~~gv~v~~~~~~--~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 293 EGNG-NYVLAKFDD---------VDAVFK-ALWDAGIVARAYKDP--RLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred CCCC-cEEEEECCC---------HHHHHH-HHHHCCEEEEECCCC--CCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 7765 589998862 113544 456789999976543 24679999998 68999999998865
No 94
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-44 Score=352.57 Aligned_cols=311 Identities=16% Similarity=0.204 Sum_probs=245.2
Q ss_pred CCceEEeecccccccHH-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-CCcE
Q 037587 35 PSGIIQMGLAENQLSFD-LLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD-PNKL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i 112 (464)
+.++|+|+.|+||++++ .... . ..+.+||+.. .+||+++|++++ +. +++|
T Consensus 23 ~~~~i~ls~Nenp~~~~~~~~~---~---------------~~~~~Yp~~~--~~L~~~ia~~~~--------~~~~~~I 74 (339)
T PRK06959 23 YDAWLDLSTGINPHGYPVPPVP---A---------------DAWRRLPEDD--DGLAACAARYYG--------APDAAHV 74 (339)
T ss_pred hhhhceeccCCCCCCCCCCCCC---H---------------HHHHhCCCch--HHHHHHHHHHhC--------CCCcccE
Confidence 45789999999998654 1110 0 1245698753 899999999986 44 5899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|++++|..+.. ++++|+ |+++.|+|+.|...++.. |++++.++++. +.+. + .+++
T Consensus 75 ~i~~Gs~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~-g~~~~~v~~~~--------~~~~----~------~~~~ 133 (339)
T PRK06959 75 LPVAGSQAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARH-GHRVVPLDEAA--------DTLP----A------ALTH 133 (339)
T ss_pred EECcCHHHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHC-CCEEEeecccc--------hhcc----c------cCCE
Confidence 999999999997765 567876 889999999999998877 99999987642 2221 1 4568
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++||||||||.++|.++++++++.|.+++.++|+||+|.++.+ . .++..+. ..+++++++|||
T Consensus 134 v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~--~----~s~~~~~----------~~~~vi~l~SfS 197 (339)
T PRK06959 134 LIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLP--A----ASLAAHT----------DRPGLVVLRSVG 197 (339)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCC--c----ccchhcc----------CCCCEEEEecCh
Confidence 99999999999999999999999999888999999999998532 1 2332232 126799999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
|+||++|+|+||++++ +.+.+.+.+....+.++.++|.++.++|++.++ .++.++.++++++++.+.|+++|+++
T Consensus 198 K~~gl~GlRiGy~v~~-~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~g~~~ 272 (339)
T PRK06959 198 KFFGLAGVRAGFVLAA-PALLAALRDALGAWTVSGPARHAVRAAFADAAW----QAAMRERLAADGARLAALLRAHGFAV 272 (339)
T ss_pred hhcCCcchheEEEecC-HHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHH----HHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 9999999999999995 556666777766777899999999999998665 56778899999999999999998877
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
. .+++|+|++++. ..++...++ ++||.|+.. + ..+++||+++. ++++++.++++|+++++..
T Consensus 273 ~--~~~~f~~~~~~~---------~~~l~~~l~-~~GI~vr~~---~--~~~~lRisi~~-~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 273 H--ATPLFSWTDDPR---------AAALHAALA-RRGIWTRYF---A--PPPSVRFGLPA-DEAEWQRLEDALAECVPTL 334 (339)
T ss_pred c--CcceEEEEeCCC---------HHHHHHHHH-hCCeEEEEC---C--CCCeEEEECCC-CHHHHHHHHHHHHHHHHHH
Confidence 6 356899998762 124666654 679999853 2 24689999953 6789999999999887765
Q ss_pred C
Q 037587 433 N 433 (464)
Q Consensus 433 ~ 433 (464)
.
T Consensus 335 ~ 335 (339)
T PRK06959 335 A 335 (339)
T ss_pred h
Confidence 4
No 95
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.1e-44 Score=353.98 Aligned_cols=334 Identities=22% Similarity=0.292 Sum_probs=268.9
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.|+|+++ ++.+.+++.+.. .....|++..+ .+||+++|++++ +++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 88 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAA-------------DELHRYPDGSG-FELKAALAEKFG--------VDPERII 88 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 457899999999885 455666665531 23467887654 899999999985 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|..+...+... |++++.++.+ ++.+|++.+++.+.+ ++++|
T Consensus 89 ~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~~---~~~~~~~~l~~~~~~------~~~~v 158 (367)
T PRK02731 89 LGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAV-GAKPVEVPAK---DYGHDLDAMLAAVTP------RTRLV 158 (367)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHc-CCeEEEeccc---CCCCCHHHHHHHhCC------CCcEE
Confidence 9999999999999999999999999999998887776666 9999999873 577899999988753 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
+++|||||||.+++.++++++++.|+ +++++|+||+|.++.+.+. ...++ ...+ ..+++++++||||
T Consensus 159 ~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~-~~~~---------~~~~~i~~~S~SK 225 (367)
T PRK02731 159 FIANPNNPTGTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGL-ELVA---------KFPNVVVTRTFSK 225 (367)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHH-HHHh---------hcCCEEEEeeehH
Confidence 99999999999999999999999875 6999999999998766443 22222 2222 2368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL 353 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 353 (464)
.||++|+|+||++++ +.+.+.+.+....+..++++|.++..++++.. ++++.++.++++++.+.+.|++.|+.+.
T Consensus 226 ~~g~~G~RiG~l~~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 300 (367)
T PRK02731 226 AYGLAGLRVGYGIAP-PEIIDALNRVRQPFNVNSLALAAAVAALDDDA----FVEKSRALNAEGMAWLTEFLAELGLEYI 300 (367)
T ss_pred hhcCcccceeeeeCC-HHHHHHHHHccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 999999999999995 45556666655556678899999999998744 4677788888899999999999898877
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++. |+|+|++++...+ ..+++..|. ++||.|+|+..|+ .++++||+++ +.++++.++++|+++++
T Consensus 301 ~~~-g~~~~i~~~~~~~------~~~~~~~L~-~~gI~v~~~~~~~--~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 301 PSV-GNFILVDFDDGKD------AAEAYQALL-KRGVIVRPVAGYG--LPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCC-ceEEEEECCCCCC------HHHHHHHHH-HCCEEEEeCCCCC--CCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 544 5799999854221 235667665 6799999998875 3679999998 58899999999998875
No 96
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-43 Score=344.71 Aligned_cols=323 Identities=18% Similarity=0.290 Sum_probs=248.4
Q ss_pred CCCCCCCCCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 28 PYDQLHNPSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
.|.....+.++|+|+.|+|++++ +.+.+++.+... ......|++. |.++||+++|+++++..
T Consensus 11 ~~~~~~~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~Y~~~-~~~~Lr~aia~~~~~~~----- 73 (335)
T PRK14808 11 AYPYETEKRDRTYLALNENPFPFPEDLVDEVFRRLN-----------SDTLRIYYDS-PDEELIEKILSYLDTDF----- 73 (335)
T ss_pred CcCCCCCCCceeEecCCCCCCCCCHHHHHHHHHHhh-----------hhhhhcCCCC-ChHHHHHHHHHHhCCCC-----
Confidence 34444455788999999999964 556666555311 1234558765 78999999999997531
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+++++|++|+|++++|..++.++ |.|++++|+|+.|...++.. |++++.+++++ ++.++... +.
T Consensus 74 ~~~~~i~it~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~----~~----- 137 (335)
T PRK14808 74 LSKNNVSVGNGADEIIYVMMLMF----DRSVFFPPTYSCYRIFAKAV-GAKFLEVPLTK--DLRIPEVN----VG----- 137 (335)
T ss_pred CCcceEEEcCCHHHHHHHHHHHh----CcEEECCCCHHHHHHHHHHc-CCeEEEecCCC--cCCCChhH----cc-----
Confidence 68999999999999999999887 67999999999999999887 99999999874 34444221 11
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
+.++++++|||||||.++|.+++++|+ +++++||+||+|.++ .+. .+.+ ++. ..++++
T Consensus 138 --~~~~i~i~nP~NPTG~~~s~~~l~~l~----~~~~~ii~DE~Y~~f--~~~--~~~~---~~~---------~~~~vi 195 (335)
T PRK14808 138 --EGDVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAYYEF--HGE--SYVD---LLK---------KYENLA 195 (335)
T ss_pred --CCCEEEEeCCCCCCCCCcCHHHHHHHH----hcCCEEEEECchhhh--cCC--chHH---HHH---------hCCCEE
Confidence 458899999999999999999998886 479999999999984 322 2222 223 226899
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
+++||||+||++|+|+||+++++ .+.+.+.+....+.++.++|.++..++++.++ ..+.++.+.++++.+.+.|+
T Consensus 196 ~~~S~SK~~~l~GlRvG~~v~~~-~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~----~~~~~~~~~~~r~~l~~~L~ 270 (335)
T PRK14808 196 VIRTFSKAFSLAAQRIGYVVSSE-KFIDAYNRVRLPFNVSYVSQMFAKVALDHREI----FEERTKFIVEERERMKSALR 270 (335)
T ss_pred EEEechhhccCcccceEEEEeCH-HHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999955 45566666665566889999999888876443 55566677777899999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
+.|+++.+++|+ |+|+.++.. ...++...+ .++||.|+. | .+++||+++ +.++++.+++.|+
T Consensus 271 ~~g~~~~~~~g~-f~~~~l~~~-------~~~~~~~~l-~~~Gi~V~~---~----~~~~Risi~--~~~~~~~~~~~l~ 332 (335)
T PRK14808 271 EMGYRITDSRGN-FVFIFMEKE-------EKERLLEHL-RAKNIAVRS---F----REGVRITIG--KREENDMILKELE 332 (335)
T ss_pred HCCCEECCCCCe-EEEEeCCCc-------cHHHHHHHH-HHCCeEEEE---C----CCCeEEecC--CHHHHHHHHHHHH
Confidence 999988888765 889998731 112455554 578999994 3 257999998 5899999999987
Q ss_pred HH
Q 037587 427 VF 428 (464)
Q Consensus 427 ~~ 428 (464)
.+
T Consensus 333 ~~ 334 (335)
T PRK14808 333 VF 334 (335)
T ss_pred hh
Confidence 54
No 97
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=7.6e-43 Score=338.51 Aligned_cols=308 Identities=19% Similarity=0.277 Sum_probs=237.0
Q ss_pred CCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 30 DQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 30 ~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.-+.++.++|+|++|+|+++++.+.+++.+.. .....||. ...||++++++++
T Consensus 2 ~~~~~~~~~i~l~~~~np~~p~~~~~a~~~~~-------------~~~~~yp~---~~~l~~~ia~~~~----------- 54 (311)
T PRK08354 2 HGGIREEGLIDFSASVNPYPPEWLDEMFERAK-------------EISGRYTY---YEWLEEEFSKLFG----------- 54 (311)
T ss_pred CCCCCccceeEecCCCCCCCCHHHHHHHHHHH-------------HHhhcCCC---hHHHHHHHHHHHC-----------
Confidence 44566788999999999998777777766531 22446764 3789999999874
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|+++++..++..+ .+||.|++++|+|+.|...++.. |++++.++ +|++.+++.++ +
T Consensus 55 ~~I~vt~G~~~al~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~-g~~~~~~~--------~d~~~l~~~~~-------~ 117 (311)
T PRK08354 55 EPIVITAGITEALYLIGILA-LRDRKVIIPRHTYGEYERVARFF-AARIIKGP--------NDPEKLEELVE-------R 117 (311)
T ss_pred CCEEECCCHHHHHHHHHHhh-CCCCeEEEeCCCcHHHHHHHHHc-CCEEeecC--------CCHHHHHHhhc-------C
Confidence 37999999999999888554 48999999999999999998877 99997654 46788877654 4
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
.++++++|||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. . . ..+++++++
T Consensus 118 ~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~--~-~----------------~~~~vi~~~ 178 (311)
T PRK08354 118 NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE--S-P----------------EGENIIKLR 178 (311)
T ss_pred CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc--c-c----------------CCCcEEEEe
Confidence 56799999999999999999999999999999999999999998766432 1 1 127899999
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG 349 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 349 (464)
||||+||+||+|+||+++ +.+.++....++.++...+.++..++.+. + +++.+.++.+.++++.+.+.+
T Consensus 179 S~SK~~~l~GlRiG~~v~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~l---- 247 (311)
T PRK08354 179 TFTKSYGLPGIRVGYVKG----FEEAFRSVRMPWSIGSTGYAFLEFLIEDD-F--EHLRKTMPLIWREKERFEKAL---- 247 (311)
T ss_pred ccHhhcCCccceeeeeee----hHHHHHHcCCCccCCHHHHHHHHHHHHhH-H--HHHHHHHHHHHHHHHHHHHhc----
Confidence 999999999999999998 34455566666667788888888877742 2 344555565666655554443
Q ss_pred CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 350 IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 350 ~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
..++++++|+ ++++. ..+++..+ .++||.|+||..|+ .++|+||+++ .+++.++++++|+++
T Consensus 248 --~~~~~~~~~~-~~~~~---------~~~~~~~l-~~~gv~v~~g~~f~--~~~~iRi~~~--~~~~~~~l~~al~~~ 309 (311)
T PRK08354 248 --YVKSDANFFI-KDVGD---------AEKFVEFL-KRNGILVRDCTSFG--LPGYIRFSVR--DREENEKLIRALREW 309 (311)
T ss_pred --CCCCCCcEEE-EECCC---------HHHHHHHH-HHCCeEEEecccCC--CCCeEEEEeC--CHHHHHHHHHHHHHh
Confidence 2356777554 66542 12466665 57799999999996 3689999998 467778888877764
No 98
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4.4e-43 Score=346.63 Aligned_cols=338 Identities=19% Similarity=0.287 Sum_probs=264.2
Q ss_pred cCCCCCCCCCCceEEeecccccc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 26 NNPYDQLHNPSGIIQMGLAENQL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 26 ~~~y~~~~~~~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
-..|.++.+++++|+|+.|++++ +++.+.+++.+.. .....|++ .|..++|+++|++++
T Consensus 12 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~-~g~~~lr~~ia~~~~------ 71 (352)
T PRK03321 12 IPAYVPGKTVPGAIKLSSNETPFGPLPSVRAAIARAA-------------AGVNRYPD-MGAVELRAALAEHLG------ 71 (352)
T ss_pred cCCCCCCCCcccceeccCCCCCCCCCHHHHHHHHHHH-------------HhcCcCCC-CcHHHHHHHHHHHhC------
Confidence 34477776667899999999988 4566777766531 23456864 688999999999986
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
+++++|++|+|+++++..++.+++++||.|+++.|+|..|...++.. |++++.+++++ ++.+|++.+++.+++
T Consensus 72 --~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~~~~-- 144 (352)
T PRK03321 72 --VPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYPILVQVA-GATPVQVPLTP--DHTHDLDAMAAAITD-- 144 (352)
T ss_pred --cCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHHc-CCEEEEccCCC--CCCCCHHHHHHhhcc--
Confidence 67899999999999999999999999999999999998887777766 99999999864 357899999988754
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
++++|+++|||||||.++|.+++.++++.+ ++++++|+||+|.++.+.+. ...+ ..... ..++
T Consensus 145 ----~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~~--~~~~-~~~~~---------~~~~ 207 (352)
T PRK03321 145 ----RTRLIFVCNPNNPTGTVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDDD--VPDG-LELVR---------DHPN 207 (352)
T ss_pred ----CCCEEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCcC--CCcH-HHHHh---------hCCC
Confidence 788999999999999999999999999876 46999999999998766543 2122 22222 2368
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
+++++||||.||++|+|+||++++ +.+.+.+.+....+.++.++|.++.+++...+. +.+.. +.+.++++.+.+.
T Consensus 208 vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~~---~~~~~-~~~~~~r~~~~~~ 282 (352)
T PRK03321 208 VVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKVAVPFSVNSLAQAAAIASLAAEDE---LLERV-DAVVAERDRVRAA 282 (352)
T ss_pred EEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH---HHHHH-HHHHHHHHHHHHH
Confidence 999999999999999999999995 556666666655567899999988888875332 33333 3344556788999
Q ss_pred HHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 037587 345 LKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQR 424 (464)
Q Consensus 345 l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~ 424 (464)
|++.|+.+.++ +|+|+|++++.. ..+++..+ +++||.|++ |+ ..++||+++ ++++++.++++
T Consensus 283 L~~~~~~~~~~-~g~~i~i~l~~~--------~~~~~~~l-~~~gI~v~~---~~---~~~iRi~~~--~~~~~~~~~~a 344 (352)
T PRK03321 283 LRAAGWTVPPS-QANFVWLPLGER--------TADFAAAA-AEAGVVVRP---FA---GEGVRVTIG--APEENDAFLRA 344 (352)
T ss_pred HHHCCCccCCC-CCCEEEEeCCCC--------HHHHHHHH-HHCCEEEEc---cC---CCcEEEeeC--CHHHHHHHHHH
Confidence 99888876554 567999998521 23466665 578999987 32 346999997 68999999999
Q ss_pred HHHHHH
Q 037587 425 IKVFAQ 430 (464)
Q Consensus 425 l~~~l~ 430 (464)
|++++.
T Consensus 345 l~~~~~ 350 (352)
T PRK03321 345 ARAWRA 350 (352)
T ss_pred HHHHhc
Confidence 998754
No 99
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-42 Score=340.54 Aligned_cols=326 Identities=19% Similarity=0.327 Sum_probs=253.3
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
..++|+.|+|+++ ++.+.+++.+... ......|++.. ..+||+++|++++ +++++|++|
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~-----------~~~~~~y~~~~-~~~lr~~ia~~~~--------~~~~~i~it 82 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVK-----------SSQVNIYPDPT-AEKLREELARYCS--------VVPTNIFVG 82 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhh-----------cCcccCCCCcc-HHHHHHHHHHHhC--------CCcccEEEe
Confidence 3489999999985 4666666655311 12346787654 6999999999975 688999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.+++++ +|.+|++.+++.+.+ .++++|++
T Consensus 83 ~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~~-----~~~k~v~l 154 (351)
T PRK14807 83 NGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIA-GAVEIPVKLKE--DYTYDVGSFIKVIEK-----YQPKLVFL 154 (351)
T ss_pred cCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCCCHHHHHHHhhc-----cCCCEEEE
Confidence 99999999999999999999999999999888877766 99999999863 577899999998853 27899999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
+|||||||.+++.++++++++ +++.++|+||+|.++ + +. ...+ ... ..+++++++||||.|
T Consensus 155 ~~p~NPtG~~~~~~~l~~l~~---~~~~~~ivDe~y~~~-~-~~--~~~~---~~~---------~~~~vi~~~S~SK~~ 215 (351)
T PRK14807 155 CNPNNPTGSVIEREDIIKIIE---KSRGIVVVDEAYFEF-Y-GN--TIVD---VIN---------EFENLIVLRTLSKAF 215 (351)
T ss_pred eCCCCCCCCCCCHHHHHHHHH---hCCCEEEEeCcchhh-c-cc--chHH---Hhh---------hCCCEEEEecchHhc
Confidence 999999999999988888776 446679999999874 3 32 2222 222 236899999999999
Q ss_pred CCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec
Q 037587 276 SMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK 354 (464)
Q Consensus 276 g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 354 (464)
|++|+|+||++++ +.+.+.+......+.++.++|.++..++++. + +++.++.++++++.+.+.|.+. |+.+.+
T Consensus 216 ~~~GlRiG~~v~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~----~~~~~~~~~~~r~~l~~~l~~~~g~~~~~ 289 (351)
T PRK14807 216 GLAGLRVGYAVAN-ENILKYLNLVKSPYNINSLSQVIALKVLRTG-V----LKERVNYILNERERLIKELSKIPGIKVYP 289 (351)
T ss_pred ccchhceeeeecC-HHHHHHHHHccCCCCcCHHHHHHHHHHHhHH-H----HHHHHHHHHHHHHHHHHHHHhCCCcEECc
Confidence 9999999999984 5566666666656668899999999999863 3 4445556677888899999876 888766
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
++ |+|+|++++. ..+++..+ .++||.|+++..+. ..++++||+++ ++++.+.+++.|++++
T Consensus 290 ~~-~~~~~i~~~~---------~~~~~~~l-~~~gV~v~~~~~~~-~~~~~iRis~~--~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 290 SK-TNFILVKFKD---------ADYVYQGL-LERGILVRDFSKVE-GLEGALRITVS--SCEANDYLINGLKELL 350 (351)
T ss_pred CC-ccEEEEEcCC---------HHHHHHHH-HHCCEEEEECCCCC-CCCCeEEEEcC--CHHHHHHHHHHHHHhh
Confidence 55 5699999862 12355555 46799999865432 24679999998 4788888998887754
No 100
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-42 Score=340.15 Aligned_cols=328 Identities=16% Similarity=0.266 Sum_probs=249.4
Q ss_pred hcCCCCCCCCCCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 25 ENNPYDQLHNPSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 25 ~~~~y~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.-.+|..... .++|+|+.|+|++++ +.+.+++.+.... .....|++ .|.++||+++|++++
T Consensus 8 ~~~~~~~~~~-~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~-~g~~~lr~~ia~~~~----- 69 (337)
T PRK03967 8 SFKPYRVVEG-NYRIWLDKNENPFDLPEELKEEIFEELKR-----------VPFNRYPH-ITSDPLREAIAEFYG----- 69 (337)
T ss_pred hcCCCCCCCC-CceEEecCCCCCCCCCHHHHHHHHHHhhc-----------CccccCCC-CCHHHHHHHHHHHhC-----
Confidence 3344533322 367999999999853 5555555442110 23567875 588999999999996
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+++++|++|+|+++++..++.++ +||.|+++.|+|+.|...+... |++++.++++. +|.+|++.+++.+.
T Consensus 70 ---~~~~~I~~t~G~~~~l~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~~~-- 139 (337)
T PRK03967 70 ---LDAENIAVGNGSDELISYLVKLF--EGKHIVITPPTFGMYSFYAKLN-GIPVIDVPLKE--DFTIDGERIAEKAK-- 139 (337)
T ss_pred ---cCcceEEEcCCHHHHHHHHHHHh--CCCeEEEeCCChHHHHHHHHHc-CCeEEEeecCC--CCCcCHHHHHHhcc--
Confidence 68999999999999999998876 7999999999999887777766 99999999863 57899999887542
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
++++++++|||||||.+++.+++.+++ ++++++|+||+|.++. .. .+.+ +.. ..+
T Consensus 140 -----~~~~v~~~~P~NPtG~~~~~~~l~~i~----~~~~~ii~De~y~~~~--~~--~~~~---~~~---------~~~ 194 (337)
T PRK03967 140 -----NASAVFICSPNNPTGNLQPEEEILKVL----ETGKPVVLDEAYAEFS--GK--SLIG---LID---------EYP 194 (337)
T ss_pred -----CCCEEEEeCCCCCCCCCCCHHHHHHHH----hcCCEEEEECchhhhc--cc--chHH---HHh---------hCC
Confidence 678899999999999999988877765 3699999999999853 22 2122 222 226
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
++++++||||.||++|+|+||++++ +.+.+.+.+....++++.++|.++..++++.++ ..+.++.+.++++.+.+
T Consensus 195 ~vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~----~~~~~~~~~~~r~~l~~ 269 (337)
T PRK03967 195 NLILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPPFSLNILTMKIVRLALDHYDL----IEERIDYIIKERERVRR 269 (337)
T ss_pred CEEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH----HHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999995 456666666666677889999999999987554 44444555666788888
Q ss_pred HHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHH
Q 037587 344 GLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 344 ~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
.|.+.. .+.+++|+|++++ +...++ ++||.|+++... ..+++||+++ +.++.+++++
T Consensus 270 ~L~~~~----~~~~~~~~~~~~~-------------~~~~l~-~~gi~v~~~~~~---~~~~~Ri~~~--~~~~~~~l~~ 326 (337)
T PRK03967 270 ELGEYA----YPSDANFLLLKLD-------------AYDYLL-ENGIVVRKLSGR---LEGHIRVTVG--KREENDEFIK 326 (337)
T ss_pred HhccCc----CCCCCcEEEEhHH-------------HHHHHH-HCCEEEEeCCCC---CCCeEEEecC--CHHHHHHHHH
Confidence 887642 3466789999874 345555 579999986532 3579999998 5788889999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|+++.+.+.
T Consensus 327 ~l~~~~~~~~ 336 (337)
T PRK03967 327 ALKEIKEGYG 336 (337)
T ss_pred HHHHHHHhcC
Confidence 9988877654
No 101
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.1e-42 Score=340.00 Aligned_cols=310 Identities=17% Similarity=0.239 Sum_probs=239.2
Q ss_pred CCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 35 PSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
+.++|+|+.|+||++++.. . +.. .....||.. ..+||++||++++ +++|++
T Consensus 19 ~~~~i~l~~ne~p~~~~~~-~-~~~---------------~~~~~yp~~--~~~Lr~~ia~~~~----------~~~I~i 69 (330)
T PRK05664 19 LADWLDLSTGIAPWPWPVP-A-IPA---------------DAWARLPET--DDGLEAAARAYYG----------APQLLP 69 (330)
T ss_pred HHHheeecCCcCCCCCCCc-c-cCH---------------HHHHhCCCC--hHHHHHHHHHHhC----------CCCEEE
Confidence 3468999999999865311 0 111 113458754 3899999999984 479999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|++++|.+++. +.+||+|++++|+|+.|...++.. |++++.++++ .+++.+. ++++++
T Consensus 70 t~Gs~~al~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~-g~~~~~v~~~----------~~~~~~~-------~~~~v~ 129 (330)
T PRK05664 70 VAGSQAAIQALPR--LRAPGRVGVLSPCYAEHAHAWRRA-GHQVRELDEA----------EVEAALD-------SLDVLV 129 (330)
T ss_pred CcCHHHHHHHHHH--ccCCCEEEEcCCChHHHHHHHHHc-CCeEEEechh----------hHhhhhc-------CCCEEE
Confidence 9999999999863 579999999999999999988877 9999998753 3444432 567899
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
++|||||||.++|.+++++|+++|++++++||+||+|.++ ... .++..+. ..+++++++||||+
T Consensus 130 l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~--~~~----~s~~~~~----------~~~~vi~~~SfSK~ 193 (330)
T PRK05664 130 VVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDN--TPQ----HSLAACA----------HRPGLIVLRSFGKF 193 (330)
T ss_pred EeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccC--CCc----ccccccc----------cCCCEEEEeecccc
Confidence 9999999999999999999999999999999999999863 221 2333332 23689999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK 354 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 354 (464)
||+||+|+||++++ +.+.+.+......+.++.+.|.++..+|.+..+ .++.++.++++++.+.+.|+++|++..+
T Consensus 194 ~gl~GlRiG~~v~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 268 (330)
T PRK05664 194 FGLAGARLGFVLAE-PALLRALAELLGPWTVSGPTRWLAQAALADTPW----QRRQRERLLAASQRLAALLRRHGLTPAG 268 (330)
T ss_pred ccCCCcceEEEEeC-HHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHH----HHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 99999999999995 445565665555566889999999999987654 5667888999999999999998865332
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
..++|+|++++. ..++...+ .++||.|++ |+ .++++||+++. ++++++++++.|+++.++
T Consensus 269 -~~~~f~~~~~~~---------~~~~~~~l-~~~gi~v~~---f~--~~~~iRis~~~-~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 269 -GCALFQWVRTED---------AAALHEFL-ARRGILTRL---FE--QPASLRFGLPA-DEADWARLDQALLAYRKE 328 (330)
T ss_pred -CcceEEEEecCC---------HHHHHHHH-HHCCeEEEE---CC--CCCeEEEECCC-CHHHHHHHHHHHHHHHhh
Confidence 223789988751 12455555 577999984 43 35799999984 578888888888877554
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3e-42 Score=342.06 Aligned_cols=326 Identities=20% Similarity=0.342 Sum_probs=256.4
Q ss_pred CCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.|+|++++ +.+.+++.+.. .....|++..+ .++|+++|++++ +++++|+
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 90 (361)
T PRK00950 33 PESIIKLGSNENPLGPSPKAVEAIEKEL-------------SKIHRYPEPDA-PELREALSKYTG--------VPVENII 90 (361)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHHHH-------------HhhcCCCCCCH-HHHHHHHHHHhC--------CCHHHEE
Confidence 4488999999998854 55665555431 23457887654 999999999985 6889999
Q ss_pred E-eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 L-TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 i-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+ |+|+++++..++.+++++||.|++++|+|+.+...++.. |++++.++.+ ++|.+|++.+++.+.+ ++++
T Consensus 91 ~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~-g~~~~~~~~~--~~~~~~~~~l~~~~~~------~~~~ 161 (361)
T PRK00950 91 VGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAH-GAKPVYAKRE--EDFSLDVDSVLNAITE------KTKV 161 (361)
T ss_pred EeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEeecC--CCCCcCHHHHHHHhcc------CCCE
Confidence 9 799999999999999999999999999999888777766 9999999854 4678999999988754 7889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++++||||||.+++.+++.++++ ++|+++|+||+|.++. +. ...+ +.. ..+++++++|||
T Consensus 162 v~~~~p~nptG~~~~~~~l~~l~~---~~~~~li~De~y~~~~--~~--~~~~---~~~---------~~~~vi~~~S~S 222 (361)
T PRK00950 162 IFLCTPNNPTGNLIPEEDIRKILE---STDALVFVDEAYVEFA--EY--DYTP---LAL---------EYDNLIIGRTFS 222 (361)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHH---HCCcEEEEECchhhhC--cc--chHH---HHH---------hcCCEEEEEeeh
Confidence 999999999999999888777654 6799999999998753 22 2222 332 226899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
|+||++|+|+||+++++ .+.+.+.+....+.++++.|.++..++.+.++ +++.++.++++++.+.+.|. +.+
T Consensus 223 K~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~----~~~~~~~~~~~r~~l~~~l~---~~~ 294 (361)
T PRK00950 223 KVFGLAGLRIGYGFVPE-WLIDYYMRAKTPFSLTRLSQAAAIAALSDKEY----IEKSIEHGIKSREYLYNELP---FKV 294 (361)
T ss_pred HhhcCchhhcchhcCCH-HHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHHHHhhcC---eeE
Confidence 99999999999999954 45555665666566888999999999987554 56666777788888877775 555
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.+ .+++|+|++++. . ...+++..++ ++||.|+||..|+..+++++||+++ +++++++++++|++++
T Consensus 295 ~~-~~~~~i~~~~~~-~------~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 295 YP-SEANFVLVDVTP-M------TAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred CC-CcceEEEEECCC-C------CHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 54 456799999842 1 1235777776 5799999999886555779999998 5789999999998875
No 103
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.7e-42 Score=339.38 Aligned_cols=327 Identities=22% Similarity=0.365 Sum_probs=263.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
++++|+|+++.|+++ ++.+.+++.+.. .....|++..+ .++|+++|++++ +++++|+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~-------------~~~~~y~~~~~-~~lr~~ia~~~~--------~~~~~i~ 75 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEA-------------DKLHRYPDPDP-AELKQALADYYG--------VDPEQIL 75 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhH-------------HHhhcCCCCCH-HHHHHHHHHHhC--------cChHHEE
Confidence 467999999999885 455666655531 23457887766 999999999986 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|++++|+|+.+...+... |++++.+++++ ++.+|++.+++.+.. ++++|
T Consensus 76 ~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~~~~------~~~~v 146 (346)
T TIGR01141 76 LGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYEISAKIH-GAEVVKVPLDE--DGQLDLEDILVAIDD------KPKLV 146 (346)
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEeccCC--CCCCCHHHHHHhcCC------CCCEE
Confidence 9999999999999999999999999999999887777766 99999999864 367899999987543 78899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.++++++++.++ +++++|+||+|.++.+... ..+ ... ..+++++++|+||
T Consensus 147 ~l~~p~NptG~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~---~~~---~~~---------~~~~~i~~~S~sK 210 (346)
T TIGR01141 147 FLCSPNNPTGNLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGEPS---TLP---LLA---------EYPNLIVLRTLSK 210 (346)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCCcc---HHH---HHh---------hCCCEEEEehhhH
Confidence 99999999999999999999999987 7999999999986433211 111 222 1257899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRC 352 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 352 (464)
.||++|+|+||++++ +.+.+.+......+++++++|.++..++++.. +.++.++.++++++.+.+.|+++ |+++
T Consensus 211 ~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 285 (346)
T TIGR01141 211 AFGLAGLRIGYAIAN-AEIIDALNKVRAPFNLSRLAQAAAIAALRDDD----FIEKTVEEINAERERLYDGLKKLPGLEV 285 (346)
T ss_pred hhhchhhhceeeecC-HHHHHHHHhccCCCCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999984 55666666665566678999999999998754 46778888889999999999988 8887
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
.++ +|+|+|++++. . ..+++..|. ++||.+.||..|+.. ++++||+++ ++++++++++.|+
T Consensus 286 ~~~-~g~~~~~~~~~--~------~~~~~~~L~-~~gI~v~~g~~f~~~-~~~iRls~~--~~~~i~~~~~~l~ 346 (346)
T TIGR01141 286 YPS-DANFVLIRFPR--D------ADALFEALL-EKGIIVRDLNSYPGL-PNCLRITVG--TREENDRFLAALR 346 (346)
T ss_pred CCC-cCCEEEEecCC--C------HHHHHHHHH-HCCeEEEeCCCcCCC-CCeEEEecC--CHHHHHHHHHHhC
Confidence 654 55799999874 1 235666665 679999999988644 789999998 6899999888763
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=4.7e-41 Score=328.70 Aligned_cols=313 Identities=18% Similarity=0.265 Sum_probs=250.8
Q ss_pred CCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 35 PSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.+++|+|+.++|+++++... .. .....+|+++.+ +++|++++++++ +++++|++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~----~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~~ 69 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPPVPP----IP-------------ASAWARYPDPEY-DELRAAAAAYYG--------LPAASVLP 69 (330)
T ss_pred hhheeEccccCCCCCCChhh----cc-------------hHHHhhCCCccH-HHHHHHHHHHhC--------CChhhEEE
Confidence 45679999999999876211 11 134578998776 999999999985 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..+..+ +.+| .|++++|+|..+...+... |++++.++ |++.+++.+. ++++++
T Consensus 70 t~G~~~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~-g~~~~~~~---------d~~~l~~~~~-------~~~~v~ 130 (330)
T TIGR01140 70 VNGAQEAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAA-GHEVVELP---------DLDRLPAALE-------ELDVLV 130 (330)
T ss_pred CCCHHHHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHc-CCEEEEeC---------CHHHHHhhcc-------cCCEEE
Confidence 99999999998766 4677 6999999999999888877 99998886 6788887763 467899
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
+++||||||.+++.+++++|+++|+++|++||+||+|.++.+. .++..+.. ..+++++++||||.
T Consensus 131 i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~------~~~~~~~~---------~~~~~i~~~S~SK~ 195 (330)
T TIGR01140 131 LCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD------ASLAPQAA---------RFPGLVVLRSLTKF 195 (330)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc------cchhhHhc---------cCCCEEEEEecchh
Confidence 9999999999999999999999999999999999999875432 12222221 23789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCL 353 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~ 353 (464)
||++|+|+||+++++ .+.+.+..+...+.+++++|.++..++++.++ .+..++.++++++.+.+.|++++ +++.
T Consensus 196 ~g~~G~R~G~i~~~~-~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 270 (330)
T TIGR01140 196 FGLAGLRLGFVVAHP-ALLARLREALGPWTVNGPARAAGRAALADTAW----QAATRARLAAERARLAALLARLGGLEVV 270 (330)
T ss_pred hcCchhhhhheeCCH-HHHHHHHhcCCCCCchHHHHHHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHhCCCceEC
Confidence 999999999999954 46666666666667889999999999987665 45677889999999999999987 5655
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
+ .+|+|+|++++. ..+++++|+ ++||.+.||..|+....+++||+++. ..++ +.++++|
T Consensus 271 ~-~~~~f~~~~~~~---------~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 271 G-GTALFLLVRTPD---------AAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred C-CCCeEEEEEcCC---------HHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 4 467899999873 135777776 57999999999964456799999985 3333 7776665
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6.8e-39 Score=301.07 Aligned_cols=348 Identities=20% Similarity=0.254 Sum_probs=267.1
Q ss_pred ccccCCCCCCcHHHHHHHHHHHH-HHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCC
Q 037587 76 ELALFQDYHGFPDAKKELVKLMA-RIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRP 154 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~ 154 (464)
...+|+++.|.++|+.-|..+.+ ..+.. ....-+|++|+|.+.+++.+++.++.+||.|+++.++|+.....++..
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p--~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~- 168 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAP--PYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEAL- 168 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCC--CCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhcccc-
Confidence 35689999999999999999665 22221 123458999999999999999999999999999999999988888877
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhc---CCceEEEEEeCC--CCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTL---NLKVKGVLITNP--SNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~~~~~vil~~P--~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
|+++++|+++.+ ++++|.|++.+...... .++++ |+.|-| +||||..+|.+.+++|.++|++|+++||+||
T Consensus 169 gv~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 169 GVKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred CceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 999999998754 48999999999876433 24555 556666 8999999999999999999999999999999
Q ss_pred cccccccCC---C---CCCccchhhhhhcc-CcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc
Q 037587 230 IYSGTVFDS---P---SSSFISIMEAVMDR-NIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF 302 (464)
Q Consensus 230 ay~~~~~~~---~---~~~~~~~~~l~~~~-~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~ 302 (464)
+|.-+.|.. . +.+..+...+...+ +.=.+.|..++||.+.||||.++ ||+|+||+.+++..+...+......
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~ 323 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVA 323 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhccee
Confidence 998777762 1 11112211111100 00012356789999999999998 9999999999665555554433211
Q ss_pred -CCCChHHHHHHHHHcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHhC---C-CeeecCCccEEEEEecCcc--cccC
Q 037587 303 -GLVSSQTQYLLSRMLSD---KKFTCNYMKENRKRLRKRKEMLVSGLKVA---G-IRCLKSNAGLFCWVDMRHL--LVSN 372 (464)
Q Consensus 303 -~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---g-~~~~~~~~g~f~~~~l~~~--~~~~ 372 (464)
..+|.++|.++-++|.. ..| .+|+.+.+..|..|+..+..+|.+. + .++.+|.+|||+|++++-. -..+
T Consensus 324 t~~pSg~sq~iv~a~l~~wgqeG~-~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~ 402 (472)
T KOG0634|consen 324 TSGPSGFSQGIVYAMLKRWGQEGF-LRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKK 402 (472)
T ss_pred ecCcccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccccccc
Confidence 23566778777777664 334 5889999999999999999999886 4 6788999999999999821 1112
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCCC-C----CCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHCN-E----PGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~----~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
+....+++....+.++||.+.+|..|... . .-+||++++..+.|+++++++++..+++++
T Consensus 403 ~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 403 SINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred chHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 23334556677777899999999999854 2 239999999889999999999999999875
No 106
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=273.37 Aligned_cols=330 Identities=21% Similarity=0.295 Sum_probs=261.0
Q ss_pred CCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..+++.++.++|+..| |... +--..|+++.. .+++.++++- -++++++|+
T Consensus 40 G~~iv~ld~~e~~ryPdP~q~--------------------efk~~~~d~rn-k~ls~a~~~d--------kpLt~dnic 90 (375)
T KOG0633|consen 40 GRDIVKLDANENPRYPDPEQM--------------------EFKYVYPDPRN-KRLSDALAQD--------KPLTSDNIC 90 (375)
T ss_pred CCCceEeccccCCCCcCHHHc--------------------ccccccCCccc-chhhhhcccC--------CCCCccceE
Confidence 3467888888777643 3111 11235666653 6677666654 247899999
Q ss_pred EeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++.|+.|.|++++++.|.|| ++|++-.|+|+.|.-.+... +++|+.+|+.+ +|.++.+++.+.++. ...+|.
T Consensus 91 ~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iN-d~eVvkvpl~p--dF~lnvdai~evl~~----ds~iK~ 163 (375)
T KOG0633|consen 91 VGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAIN-DAEVVKVPLNP--DFSLNVDAIAEVLEL----DSKIKC 163 (375)
T ss_pred EecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecC-CceEEEecCCC--CccccHHHHHHHHhc----cccceE
Confidence 99999999999999999999 99999999999998877766 99999999975 899999999998864 347999
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++++|+||||..++.+++++|++... +.++++||+|.+ |.+. .|.+.++.++ +|++++.+||
T Consensus 164 ~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYid--Fsg~----~S~~~lV~kY---------pNLivlqTlS 226 (375)
T KOG0633|consen 164 IFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYID--FSGV----ESRMKLVKKY---------PNLIVLQTLS 226 (375)
T ss_pred EEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEe--eccc----cccchHhHhC---------Cceeehhhhh
Confidence 999999999999999999999988643 788999999998 5554 3666677755 8999999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
|.||++|+|+||-.. +..+.+.+.++..++++|.+...++.+++.+.. -+.++..++.+-+.+.+|...|.+. ++.
T Consensus 227 KsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n--~kkme~~rdaiv~er~RL~keLt~v~~~~ 303 (375)
T KOG0633|consen 227 KSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVAGSVAALAALSDSN--GKKMEDVRDAIVRERERLFKELTEVPFLN 303 (375)
T ss_pred hhcCcceeEeecccc-cHHHHHHHHhccCCccccchhHHHHHHhcCccc--chHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 999999999999988 556788888888777789888888888898655 3568888888888889999999886 332
Q ss_pred --eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe-CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 352 --CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS-PGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 352 --~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~-pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
+.+..++ |+.+++...-+ ..+..+...++.+.||.|+ .|+.-+ ..|++||+++ ++|+...+++.|+++
T Consensus 304 ~~~gg~daN-FiLi~v~~~~n----~~akkly~q~at~~gVvVRfrgse~~--c~G~lRitvG--t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 304 DYPGGSDAN-FILIEVTGGDN----GMAKKLYKQDATKMGVVVRFRGSEEG--CKGYLRITVG--TPEENTVLMKCLKQF 374 (375)
T ss_pred CCCCccccc-EEEEEEcCCCc----HHHHHHHHHHHHhcceEEEEcCCccc--cceeEEEEcC--CcccchHHHHHHHhh
Confidence 3345565 88888864311 3344577777888999998 343322 3689999999 688899999998876
Q ss_pred H
Q 037587 429 A 429 (464)
Q Consensus 429 l 429 (464)
+
T Consensus 375 l 375 (375)
T KOG0633|consen 375 L 375 (375)
T ss_pred C
Confidence 3
No 107
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=269.25 Aligned_cols=344 Identities=20% Similarity=0.368 Sum_probs=266.5
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChhhhcccCC
Q 037587 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGFDRDLKWRP 154 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~~ 154 (464)
.+..|+.+.|.+-+|+.+|+|..++-| ++++|++|++|.|++.++..++..++ ++.+.|++|-|.|+-|...+..+
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG--~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~- 181 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDG--IPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLL- 181 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccC--CCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHh-
Confidence 466799999999999999999998877 78899999999999999999999876 46799999999999999888887
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
|...+++.++++.+|.+|.++|++.+.++. .+.+++++++.||.||||.++|.+.+++|+.+|.+.+++++.||+|.+-
T Consensus 182 ~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~N 260 (475)
T KOG0258|consen 182 GGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDN 260 (475)
T ss_pred CCcccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhh
Confidence 999999999999999999999999999876 6779999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEe--cCHHHHHHHHHhcccCC-CChHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYS--NNERVVSAATKMSSFGL-VSSQTQ 310 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~--~~~~~~~~~~~~~~~~~-~s~~~q 310 (464)
.|... +.|+|+...+.+++...+ ..--++.++|.||.+ |-.|.|-||+-. ..+.+.+.+.++.+... .+...|
T Consensus 261 vy~~~-skFhSfKKvl~emg~~~~--~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ 337 (475)
T KOG0258|consen 261 VYTTG-SKFHSFKKVLHEMGNPYP--DNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQ 337 (475)
T ss_pred ccCCC-cchHhHHHHHHHhcCccC--CceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccch
Confidence 88643 378888887776631110 112345578999997 668999999843 34455555555444332 233455
Q ss_pred HHHHHHcCC-----chh--hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecC--cc----cccCChhH
Q 037587 311 YLLSRMLSD-----KKF--TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMR--HL----LVSNTFEA 376 (464)
Q Consensus 311 ~~~~~~l~~-----~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~--~~----~~~~~~~~ 376 (464)
..+-.+... ..+ ...........++++...+.+.+..+ |+.+.+++|.||++.++. .. ........
T Consensus 338 ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~P 417 (475)
T KOG0258|consen 338 KLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAP 417 (475)
T ss_pred hhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCC
Confidence 555555542 222 12223335567788888999999988 999999999999987653 21 11112223
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCC-CeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 377 EKELWKKIIFEVGLNISPGSSCHCNEP-GWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~~f~~~~~-~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+.-.|.+||+..||.++||+.|+.... -+||.+|-. +. + +.+++++++-.
T Consensus 418 D~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~ 468 (475)
T KOG0258|consen 418 DEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHA 468 (475)
T ss_pred cHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHH
Confidence 446889999999999999999997433 369999863 33 4 67777766544
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.4e-33 Score=278.32 Aligned_cols=345 Identities=29% Similarity=0.541 Sum_probs=264.0
Q ss_pred EEeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC
Q 037587 39 IQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAG 117 (464)
Q Consensus 39 i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G 117 (464)
|+|+.+.+++.. +.....+.+ ... ......|++..|..++++.++++++..++ .+..++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~l~~~l~~~l~~~~~--~~~~~~~~~~~~~ 67 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAA-AAL----------RAGLLGYYPDPGLPELREAIAEWLGRRGG--VDVPPEEIVVTNG 67 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHH-Hhh----------ccCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCcceEEEecC
Confidence 467777777742 333332222 000 12345688888999999999999997654 2345778999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN 197 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~ 197 (464)
+++++..++.++.++||+|+++.|+|..+...++.. |.+++.++.+..+.+..+.+.++... ++++++|++++
T Consensus 68 ~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~~~v~i~~ 140 (350)
T cd00609 68 AQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLA-GAEVVPVPLDEEGGFLLDLELLEAAK------TPKTKLLYLNN 140 (350)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CCEEEEEecccccCCccCHHHHHhhc------CccceEEEEEC
Confidence 999999999999999999999999999999988877 99999999875444333224444433 34889999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC
Q 037587 198 PSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM 277 (464)
Q Consensus 198 P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~ 277 (464)
|+||||.++|.+++++|+++|+++|+++|+|++|+.+.+.+. . ....... +..+.+++++|+||.+++
T Consensus 141 ~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~--~-~~~~~~~---------~~~~~~~~~~s~~K~~~~ 208 (350)
T cd00609 141 PNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE--P-PPALALL---------DAYERVIVLRSFSKTFGL 208 (350)
T ss_pred CCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc--c-cccccCc---------CccCcEEEEeecccccCC
Confidence 999999999999999999999999999999999997655433 1 1101111 134678999999999998
Q ss_pred CccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee-ec
Q 037587 278 PGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC-LK 354 (464)
Q Consensus 278 ~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~ 354 (464)
+|+|+||++++++.+.+.+.....+ +..+...+.++..++.... ++.++.++.+.++++++.+.|++.+... ..
T Consensus 209 ~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 285 (350)
T cd00609 209 PGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGE---EHLEELRERYRRRRDALLEALKELGPLVVVK 285 (350)
T ss_pred cccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 9999999999664566656555444 4577788888888888753 4577788889999999999999886543 45
Q ss_pred CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 355 SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
+.+|+|+|++++... ..+.+.+++.++||.+.++..|....+.++||+++.. +++++.++++|+
T Consensus 286 ~~~g~~~~~~~~~~~-------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 286 PSGGFFLWLDLPEGD-------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CCccEEEEEecCCCC-------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 677899999987531 1235667778889999999887655577999999975 999999999885
No 109
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-32 Score=246.40 Aligned_cols=358 Identities=20% Similarity=0.289 Sum_probs=256.5
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
++.|.|+-+ ||.-.|.+.+..+.... .++.+. ...+.+++|..++|...|.+++++.+++.+| ..+++.||.+|
T Consensus 30 ~g~imLggG-NPa~iPem~~~f~~~~a-emla~~--~~~e~~cnY~~pQG~~~li~ala~~l~~~yg--wnit~~NIalT 103 (417)
T COG3977 30 PGAIMLGGG-NPARIPEMDDYFQDLLA-EMLASG--KATEALCNYDGPQGKAVLIDALAKMLRREYG--WNITAQNIALT 103 (417)
T ss_pred CCceeeCCC-CcccChhHHHHHHHHHH-HHHhcc--hHHHHHhcCCCCcchhHHHHHHHHHHHHHhC--CCCccceeeec
Confidence 457888765 55544555555444211 111111 1124578999999999999999999999988 45789999999
Q ss_pred CChHHHHHHHHHHhcC---CCC--eEE-EcCCCCCChhhhcccCCCcEEEE---EecCCCCC--cccCHHHHHHHHHHHh
Q 037587 116 AGSTAANETLMFCLAD---PGD--AFL-LPTPYYPGFDRDLKWRPGVEIVP---IHCSSSNG--FRITISALENAYQQAQ 184 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~---~gd--~Vl-v~~p~y~~~~~~~~~~~g~~~~~---v~~~~~~~--~~~d~~~l~~~i~~~~ 184 (464)
||++.+.+.++..|.. .|+ +|+ -..|.|-+|..+.-.- ..=|.. +.+.+.+. |.+|.+++.-
T Consensus 104 nGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~-d~fVs~kP~iel~~~g~FKY~vDF~~l~i------ 176 (417)
T COG3977 104 NGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEE-DLFVSAKPNIELLPAGQFKYHVDFEHLHI------ 176 (417)
T ss_pred CCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCc-cceeeccCCcccccccceeeccCHHHccc------
Confidence 9999999999998854 232 344 4588898887653221 111111 12223333 5677777754
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
+..+.+|+++-|.||||.+++.+++.++-+++++||+.+|+|.+|+.- |..- -|.++.-+ =.+|
T Consensus 177 --~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~P-FP~i--ifsd~~~~-----------w~~N 240 (417)
T COG3977 177 --GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVP-FPGI--IFSDATPL-----------WNEN 240 (417)
T ss_pred --ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCC-CCce--eccccccc-----------CCCC
Confidence 247889999999999999999999999999999999999999999742 3322 22221112 2379
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCchhhHHHHHH-HHHHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKKFTCNYMKE-NRKRLRKRKEML 341 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l 341 (464)
++.+.|+||. |+||.|+|.+++ ++.+.+++..+.... .++.+.+++++.+++.++. .+.-++ .|-.|+.+....
T Consensus 241 iilC~SLSK~-GLPG~R~GIiIa-ne~viqaitnmn~iisLap~~~G~Aia~~mie~gdl-~rlseqVIrPFY~~~~q~~ 317 (417)
T COG3977 241 IILCMSLSKL-GLPGSRCGIIIA-NEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDL-LRLSEQVIRPFYRNRVQTT 317 (417)
T ss_pred EEEEeehhhc-CCCCcceeEEEc-cHHHHHHHHhccceeeecCCCccHHHHHHHhhcchH-HHHHHHhhhHHHHHHHHHH
Confidence 9999999995 899999999999 666777777665543 2456889999999999886 333333 344556666555
Q ss_pred HHHHHh----CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC-------CCeEEEEe
Q 037587 342 VSGLKV----AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE-------PGWFRICF 410 (464)
Q Consensus 342 ~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~-------~~~~Ris~ 410 (464)
.+.|++ .-+.+..|+|..|+|+-+.+.+- ..++++++| +++||++.||+.|.++. ..|+|+++
T Consensus 318 ~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI-----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~ 391 (417)
T COG3977 318 IAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI-----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNY 391 (417)
T ss_pred HHHHHHhcCccceeeecCCcceeehhhhccCCC-----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEec
Confidence 555554 35677889999999997765432 234677776 67899999999998643 35899999
Q ss_pred ecCCHHHHHHHHHHHHHHHHhh
Q 037587 411 ANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 411 ~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
.. ++++++.++++|.+.+++.
T Consensus 392 ~~-~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 392 VP-EPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CC-CHHHHHHHHHHHHHHHHHH
Confidence 84 8899999999999988764
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=1.3e-32 Score=277.76 Aligned_cols=352 Identities=15% Similarity=0.194 Sum_probs=253.6
Q ss_pred CCceEEeecccc--cccHHH----HHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 35 PSGIIQMGLAEN--QLSFDL----LESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 35 ~~~~i~l~~~~n--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
..++|+|++++. .+++|. +.++..+.. ......|.+..|.++||++++++++
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~------------~~g~~~Y~~~~g~~~Lreaia~~~~---------- 92 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAM------------MRGDEAYAGSRSYYRLEDAVKDIFG---------- 92 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHH------------HhCCcccCCCCCHHHHHHHHHHHhC----------
Confidence 346899999887 354322 333322211 0223579999999999999999985
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC------CCcc--cCHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS------NGFR--ITISALENAY 180 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~------~~~~--~d~~~l~~~i 180 (464)
.+++++|+|+++++..++.++++||| |++++|.|..|...+... |++++.+++++. ++|. +|++.|++.+
T Consensus 93 ~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~-G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i 170 (460)
T PRK13238 93 YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELN-GATAVDLVIDEALDTGSRHPFKGNFDLEKLEALI 170 (460)
T ss_pred CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHc-CCEEEEEeccccccccccccccCCcCHHHHHHHH
Confidence 35799999999999999999999999 999999999988877766 999999998642 3565 9999999998
Q ss_pred HHHhhcCCceEEEEEeCCCCCCC-CCCCHHHHHHHHHHHhhCCeEEEEecccc--ccccCCC---CCCccchhhhhhccC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYS--GTVFDSP---SSSFISIMEAVMDRN 254 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~--~~~~~~~---~~~~~~~~~l~~~~~ 254 (464)
.+. ..+++++|++++|||||| .++|.+++++|.++|++||+++|+|+++. ...|... .....++.++
T Consensus 171 ~~~--~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i----- 243 (460)
T PRK13238 171 EEV--GAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI----- 243 (460)
T ss_pred hhc--CCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----
Confidence 742 113689999999999998 99999999999999999999999999763 2334221 0012333222
Q ss_pred cCCCCCCCCcEEEEcCCCcCCCCCccEE------EEEEecCHHHHHHHHHhc----c---cCCCChHHHHHHHHHcCCch
Q 037587 255 IDESDDLWSRIHIVYSLSKDFSMPGFRV------GMIYSNNERVVSAATKMS----S---FGLVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 255 ~~~~~~~~~~vi~l~S~SK~~g~~GlRi------G~l~~~~~~~~~~~~~~~----~---~~~~s~~~q~~~~~~l~~~~ 321 (464)
+..+.|++|.+.++|+|+ |+++++++.+.+.++... . +...+...|.+++..+.+..
T Consensus 244 ----------~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~ 313 (460)
T PRK13238 244 ----------AREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM 313 (460)
T ss_pred ----------hhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh
Confidence 223456666666666664 356665556666555542 1 22234455777776665311
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc---CChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS---NTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~---~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
- ..+++.+. +++++|.+.|.+.|+++..|.||+|+++++...... ... ...+++.+|+.+.||.+.|++.|
T Consensus 314 ~-~~~~~~~~----~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~-~~~~~a~~L~~e~GV~~~~~~~f 387 (460)
T PRK13238 314 D-EDYLAYRI----GQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQF-PAQALACELYLEAGIRGVEIGSL 387 (460)
T ss_pred C-hHHHHHHH----HHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCC-chHHHHHHHHHHcCeeeecccce
Confidence 1 22343333 256889999999999999999999999999754211 111 23569999999999999999887
Q ss_pred CCCC-----------CCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 399 HCNE-----------PGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 399 ~~~~-----------~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.... ..++|+++.. .+.+.++.+.++|+++.++..
T Consensus 388 ~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~ 435 (460)
T PRK13238 388 LLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRE 435 (460)
T ss_pred ecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHh
Confidence 7432 3689999975 489999999999999875555
No 111
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=7.8e-31 Score=256.48 Aligned_cols=281 Identities=15% Similarity=0.149 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc---CCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLP---TPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~---~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+|++.+|++++ ++++++++++|+++++..++.+++++||.|+++ .|+|..|...++.. |++++.+
T Consensus 57 ~~Le~~lA~~~g--------~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~-ga~~~~~-- 125 (346)
T TIGR03576 57 EKVQELGREHLG--------GPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLA-GAEYFES-- 125 (346)
T ss_pred HHHHHHHHHHcC--------CCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHc-CCEEecc--
Confidence 455555555554 678999999999999999999999999999975 57888888888776 8876432
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.+++.++. .+++++|+++ ++||+|.+++.+++++|+++|+++|+++|+||+|..+..... ..
T Consensus 126 -------~~l~~l~~--------~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~--~~ 187 (346)
T TIGR03576 126 -------DELSELKK--------IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLY--GQ 187 (346)
T ss_pred -------CCHHHHhh--------CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccC--CC
Confidence 13444321 1256777774 579999999999999999999999999999999986543211 11
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCch
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~ 321 (464)
.+.... +..+++.|||| +++|+|+||+++++ .+.+.+.+....+ +++++.|.++.++|+...
T Consensus 188 ~~~~~~-------------~~divv~s~SK--alaG~r~G~v~~~~-~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~ 251 (346)
T TIGR03576 188 PPALDL-------------GADLVVTSTDK--LMDGPRGGLLAGRK-ELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFE 251 (346)
T ss_pred CCHHHc-------------CCcEEEeccch--hccccceEEEEeCH-HHHHHHHHhhcCcccCccHHHHHHHHHHHhhcc
Confidence 121111 12366789999 56899999999955 4555565554332 357788888888886532
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
.+..++.++++++.+.+.+.. +.+.++.+| |+|++++.. ...+++..+++++||.|+||..|. .
T Consensus 252 -----~~~~~~~l~~r~~~~~~~l~~--~~~~~~~~~-f~~~~~~~~-------~~~~~~~~ll~~~gV~v~~~~~f~-~ 315 (346)
T TIGR03576 252 -----LSRIRDAFKRKEEVYLRLFDK--LNVERTPTG-FVIKGVEEE-------KLIEIGLDLLRNYGIITITAVGMP-G 315 (346)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHh--CCCCcCCCe-EEEEeCCCC-------CHHHHHHHHHHhCCEEEeCCcccC-C
Confidence 245577788888888877774 556666776 899998741 112467788899999999998884 3
Q ss_pred CCCeEEEEeecCCHH---HHHHHHHHHHHHH
Q 037587 402 EPGWFRICFANITEE---TLQVALQRIKVFA 429 (464)
Q Consensus 402 ~~~~~Ris~~~~~~e---~l~~~l~~l~~~l 429 (464)
.++|+||+++. +++ +++.++++|++-+
T Consensus 316 ~~~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 316 ASKTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 47899999995 333 6999999987643
No 112
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=1.3e-31 Score=262.82 Aligned_cols=324 Identities=11% Similarity=0.118 Sum_probs=221.9
Q ss_pred eEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC
Q 037587 38 IIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAG 117 (464)
Q Consensus 38 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G 117 (464)
+|||++|+|+.|+|.+.+++... ......|.+..+..+|+++||++++ ++ .+++++|
T Consensus 1 ~~~~~~~~~~~p~~~~~~a~~~~-------------~~~~~~Y~~~~~~~~L~~~la~~~g--------~~--~~~v~~~ 57 (333)
T PRK10534 1 MIDLRSDTVTRPSRAMLEAMMAA-------------PVGDDVYGDDPTVNALQDYAAELSG--------KE--AALFLPT 57 (333)
T ss_pred CcccccccCCCCCHHHHHHHHhc-------------cCCCcccCCCHHHHHHHHHHHHHhC--------CC--eEEEeCc
Confidence 48999999999888888877653 1334578555567999999999986 33 3467777
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCC-hhhh-cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPG-FDRD-LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~-~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
+++++..++.+++.+||.|+++.|+|.. |... .....+++++.++.+ .+|.+|+++|++++.+......++++|++
T Consensus 58 g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 58 GTQANLVALLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred hHHHHHHHHHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 8888888888889999999999888753 3221 233313677777765 36889999999887431001115789999
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
+||+ ||.+++.+++++|+++|+++++++|+||+|........ ..+...+.. ..++++ .||||.|
T Consensus 136 ~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~---~~~~~~~~~---------~~~~~~--~s~SK~~ 199 (333)
T PRK10534 136 ENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAY---GCELKEITQ---------YCDSFT--ICLSKGL 199 (333)
T ss_pred ecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHc---CCCHHHHHh---------cCCEEE--EEeEcCC
Confidence 9776 59999999999999999999999999999872111000 012222211 113333 4899998
Q ss_pred CCCccEEE-EEEecCHHHHHHHHHhcccCC----CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 276 SMPGFRVG-MIYSNNERVVSAATKMSSFGL----VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 276 g~~GlRiG-~l~~~~~~~~~~~~~~~~~~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|++ +| |+++ ++.+.+.+++....+. .+.+.|.++...+++ . .+ ..+...+.++++.+.|.++|+
T Consensus 200 ~~~---~G~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~--~----~~-~~~~~~~~r~~l~~~L~~~g~ 268 (333)
T PRK10534 200 GTP---VGSLLVG-NRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH--N----VA-RLQEDHDNAAWLAEQLREAGA 268 (333)
T ss_pred CCc---ccceEEc-CHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh--h----HH-HHHHHHHHHHHHHHHHHhCCC
Confidence 864 68 5777 5556666665554332 223456655555542 1 11 222234456889999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
++.+++ ++|+|++++.. ...++. +++.++||.|+|+. ++|++.+. ++++++++++++|++++
T Consensus 269 ~~~~~~-~nfv~~~~~~~-------~~~~~~-~~l~~~gi~v~~~~--------~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 269 DVMRQD-TNMLFVRVGEE-------QAAALG-EYMRERNVLINASP--------IVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ccCCCC-ceEEEEECCch-------hHHHHH-HHHHHcCeeecCCc--------eEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 988886 56999998731 122344 55678899999873 47887753 68999999999999876
Q ss_pred H
Q 037587 430 Q 430 (464)
Q Consensus 430 ~ 430 (464)
.
T Consensus 332 ~ 332 (333)
T PRK10534 332 A 332 (333)
T ss_pred c
Confidence 4
No 113
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=6.2e-29 Score=249.87 Aligned_cols=346 Identities=15% Similarity=0.118 Sum_probs=232.3
Q ss_pred CCCceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhccccccc-ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 34 NPSGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFR-ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 34 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
...++|+|+.+.. .+ +++.+.+++.+.... .. ....|....|..++++++++++.+.++ . ++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~----------~~~~~~~~~~~~G~~~l~~~l~~~la~~~g----~-~~ 104 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDS----------HGFGMASVRFICGTQDLHKELEEKLAKFLG----T-ED 104 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHH----------cCCCCcccccccCCcHHHHHHHHHHHHHhC----C-Cc
Confidence 4567899998752 33 345555555543211 00 111223346888999999999888765 2 47
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+| ++++..++.+++++||.|++++|+|+.+...+... |++++.++. .|++.+++.+++......++
T Consensus 105 ~i~~tsG-~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~-~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~ 175 (397)
T PRK06939 105 AILYSSC-FDANGGLFETLLGKEDAIISDALNHASIIDGVRLC-KAKRYRYAN-------NDMADLEAQLKEAKEAGARH 175 (397)
T ss_pred EEEEcCh-HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhhhccCCCC
Confidence 7888888 67888889999999999999999999888777766 888877753 37888888886533223367
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|++.+.+||||.. +++++|+++|+++++++|+||+|....+... . ....... .+ ..+.+++++|
T Consensus 176 ~~v~~~~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~--~-~~~~~~~-~~-------~~~~~i~~~S 241 (397)
T PRK06939 176 KLIATDGVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGEN--G-RGTVEHF-GV-------MDRVDIITGT 241 (397)
T ss_pred eEEEEecCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCC--C-CCHHHHc-CC-------CCCCcEEEEE
Confidence 777766678999986 4688899999999999999999963222221 1 1111111 11 1245788999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhc-cc--C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMS-SF--G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|||+++ |+|+||++++++ +.+.+.... .+ . +.++..+.++.++++.. . ...+.++.++++++.+.+.|.
T Consensus 242 ~sK~~~--g~r~G~v~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~---~-~~~~~~~~~~~~~~~l~~~L~ 314 (397)
T PRK06939 242 LGKALG--GASGGYTAGRKE-VIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL---E-ESDELRDRLWENARYFREGMT 314 (397)
T ss_pred CHHHhC--ccCceEEEeCHH-HHHHHHHhCccccccCCCCHHHHHHHHHHHHHH---h-cCHHHHHHHHHHHHHHHHHHH
Confidence 999994 559999999654 444444332 21 1 12233344444444321 1 124567788889999999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeec-CCHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFAN-ITEETLQVALQ 423 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~-~~~e~l~~~l~ 423 (464)
+.|+++.++.++++ ++.++.. ....+++..|+++ ||.+.++. |+. .+.+++|++++. .++++++++++
T Consensus 315 ~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~ 385 (397)
T PRK06939 315 AAGFTLGPGEHPII-PVMLGDA------KLAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAID 385 (397)
T ss_pred HcCCCcCCCCCCEE-EEEECCH------HHHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHH
Confidence 88887776667654 3444421 1234577777654 99998643 432 234689999976 78999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++.-
T Consensus 386 ~L~~~~~~~~ 395 (397)
T PRK06939 386 AFEKVGKELG 395 (397)
T ss_pred HHHHHHHHhC
Confidence 9999987753
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=2.7e-28 Score=241.90 Aligned_cols=334 Identities=13% Similarity=0.099 Sum_probs=225.1
Q ss_pred CCCceEEeeccccccc---HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCC----cHHHHHHHHHHHHHHcCCCCC
Q 037587 34 NPSGIIQMGLAENQLS---FDLLESWLASNQEAVELKRNGESLFRELALFQDYHG----FPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~ 106 (464)
+...+|||+.| +++. ++.+.+++.+.... . + .....|....| ..+++++++++++
T Consensus 14 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~--~---~----~~~~~~~~~~g~~~~~~~l~~~la~~~~-------- 75 (360)
T TIGR00858 14 DGRRLLNFSSN-DYLGLASHPEVIQAAQQGAEQ--Y---G----AGSTASRLVSGNSPLHEELEEELAEWKG-------- 75 (360)
T ss_pred CCceEEecccC-CcccCCCCHHHHHHHHHHHHh--c---C----CCCCCcCcccCCcHHHHHHHHHHHHHhC--------
Confidence 45678999998 4432 35666666654211 0 0 00111222223 3457777777764
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.+++|++++|+.+.+ .++.+++++||.|+++.|+|+.+...+... |++++.++. +|++.+++.+++. .
T Consensus 76 -~~~~i~~~~G~~~~~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~~~~~--~ 143 (360)
T TIGR00858 76 -TEAALLFSSGYLANV-GVISALVGKGDLILSDALNHASLIDGCRLS-GARVRRYRH-------NDVEHLERLLEKN--R 143 (360)
T ss_pred -CCCEEEECchHHHHH-HHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEecC-------CCHHHHHHHHHHc--c
Confidence 356888888865555 567788899999999999999888877766 988887763 4788898888641 1
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
+.++++|++.+++||||...+ +++|.++|+++|+++|+||+|..+.++.. . .+...+.. + +..++++
T Consensus 144 ~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~--~-~~~~~~~~-~------~~~~~~i 210 (360)
T TIGR00858 144 GERRKLIVTDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGED--G-RGTLEHFG-L------KPEPVDI 210 (360)
T ss_pred cCCCeEEEEeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCC--C-CchHHhcC-C------CccCCcE
Confidence 125678888889999998865 67788889999999999999986544432 1 12222211 1 0236789
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-ccc--C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSF--G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
+++||||+||++| ||++++++ +.+.+... ..+ . ..++..+.++.++++... ..++.++.++++++++.
T Consensus 211 ~i~s~sK~~~~~g---G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~----~~~~~~~~~~~~~~~l~ 282 (360)
T TIGR00858 211 QVGTLSKALGSYG---AYVAGSQA-LIDYLINRARTLIFSTALPPAVAAAALAALELIQ----EEPWRREKLLALIARLR 282 (360)
T ss_pred EEEechhhhhccC---cEEEcCHH-HHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH
Confidence 9999999998767 99998544 44444322 221 1 233444445555554221 23456788899999999
Q ss_pred HHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHH
Q 037587 343 SGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQV 420 (464)
Q Consensus 343 ~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~ 420 (464)
+.|+++++++.++. +.|+|+.++.. ....++...|+ ++||.+.++..++. .+.+++||+++. .++++++.
T Consensus 283 ~~L~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 354 (360)
T TIGR00858 283 AGLEALGFTLMPSC-TPIVPVIIGDN------ASALALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDR 354 (360)
T ss_pred HHHHHcCCccCCCC-CCEEEEEeCCH------HHHHHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHH
Confidence 99999888777555 45899988642 12335777775 67999998766542 234689999986 68999999
Q ss_pred HHHHHH
Q 037587 421 ALQRIK 426 (464)
Q Consensus 421 ~l~~l~ 426 (464)
++++|+
T Consensus 355 ~l~~l~ 360 (360)
T TIGR00858 355 LAEALK 360 (360)
T ss_pred HHHhhC
Confidence 998874
No 115
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.97 E-value=1.4e-28 Score=244.97 Aligned_cols=323 Identities=16% Similarity=0.233 Sum_probs=233.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcE
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVE 157 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~ 157 (464)
..|.+..|.++|+++++++++ .+++++|+|+++++.+++.++++|||.| +++|+|..+...+... |++
T Consensus 47 ~~Y~~~~g~~~Leeaia~~~g----------~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~-Ga~ 114 (431)
T cd00617 47 EAYAGSKSFYDLEDAVQDLFG----------FKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEAN-GAV 114 (431)
T ss_pred CccCCCCCHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhC-CCE
Confidence 359999999999999999986 3579999999999999999999999987 6899999888777766 999
Q ss_pred EEEEecCCCCC------cc--cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 158 IVPIHCSSSNG------FR--ITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 158 ~~~v~~~~~~~------~~--~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
++.+++++..+ |. +|++.|++.+.+. ...++++|++++||||+ |..+|.+++++|.++|+++|++||+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~--~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~D 192 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV--GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLD 192 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCcc--cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 99999875433 44 9999999998741 01247889999999998 99999999999999999999999999
Q ss_pred ccccc--cccCC---CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE------EEEEEecCHHHHHHHH
Q 037587 229 EIYSG--TVFDS---PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR------VGMIYSNNERVVSAAT 297 (464)
Q Consensus 229 eay~~--~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR------iG~l~~~~~~~~~~~~ 297 (464)
++... ..|.. .+....++.++ ++.+.|+||.+.++|+| .||++++++.+.+.++
T Consensus 193 aAr~~~na~~i~~r~~g~~~~si~ei---------------~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~ 257 (431)
T cd00617 193 AARFAENAYFIKEREEGYRDKSIAEI---------------AREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEAR 257 (431)
T ss_pred chhhHhhhhhhhcccccccCCCHHHH---------------HHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHH
Confidence 99541 12210 10011233322 23467888888888887 5699997766666555
Q ss_pred Hhc----c---cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc
Q 037587 298 KMS----S---FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV 370 (464)
Q Consensus 298 ~~~----~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~ 370 (464)
... . ++..+..-..+++..|....- .+++ .+.++ +++++.+.|.+.|+++..|.+|+|+|++++....
T Consensus 258 ~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~-~~~l---~~~~~-~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~ 332 (431)
T cd00617 258 QRVVLYEGFVTYGGMAGRDMEALAQGLREAVE-EDYL---RHRVE-QVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLP 332 (431)
T ss_pred HhccccCCccccccccHHHHHHHHHHHHhccc-HHHH---HHHHH-HHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcC
Confidence 322 1 112222222333334543211 1223 33333 4588999999999999999999999999886432
Q ss_pred cCC--hhHHHHHHHHHHHhcCeEEeC-CCC-CCC--C-------CCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 371 SNT--FEAEKELWKKIIFEVGLNISP-GSS-CHC--N-------EPGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 371 ~~~--~~~~~~l~~~ll~~~gI~v~p-g~~-f~~--~-------~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
... .....+++.+|+.+.||.+.. |+. ++. . ....+|+++.. .+.++++.+.++|..+.++...
T Consensus 333 ~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~ 411 (431)
T cd00617 333 HIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED 411 (431)
T ss_pred CCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh
Confidence 111 013457888999999999753 441 111 1 12579999965 5889999999999999887663
No 116
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.97 E-value=3.3e-28 Score=244.21 Aligned_cols=340 Identities=13% Similarity=0.108 Sum_probs=227.9
Q ss_pred CCCceEEeecccc-ccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCC---Cc----HHHHHHHHHHHHHHcCCC
Q 037587 34 NPSGIIQMGLAEN-QLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYH---GF----PDAKKELVKLMARIRGNK 104 (464)
Q Consensus 34 ~~~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~~~~~~~~~ 104 (464)
+..++|+|+.+.. .++ +|.+.++..+.... ....|+.+. |. .+|++++|++++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~------------~~~~~~~s~~~~G~~~~~~~le~~ia~~~g------ 97 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDE------------HGFGMSSVRFICGTQDIHKELEAKIAAFLG------ 97 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHH------------hCCCCCCcCcccCChHHHHHHHHHHHHHhC------
Confidence 4467899999852 222 34455444443111 012344433 64 788999998886
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
.+++++++|+++++..++.+++++||.|+++.|+|+.+...++.. +.+.+.++ ..|++.+++.+++..
T Consensus 98 ----~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~-~~~~~~~~-------~~d~~~l~~~i~~~~ 165 (393)
T TIGR01822 98 ----TEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYA-------NNDMADLEAQLKEAR 165 (393)
T ss_pred ----CCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhhh
Confidence 246788889999999999999999999999999999888777655 66654443 268899999887643
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
....++++|++.+++||||.+.+ +++|+++|+++|+++|+||+|+...++.. ..+...... + ..+.
T Consensus 166 ~~~~~~~~v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~---~~~~~~~~~-~-------~~~~ 231 (393)
T TIGR01822 166 AAGARHRLIATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPT---GRGSHELCG-V-------MGRV 231 (393)
T ss_pred hcCCCceEEEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCC---CCchHHhcC-C-------CCCC
Confidence 33336788888888999999965 77888899999999999999963222222 112222211 0 1245
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-ccc--C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSF--G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEM 340 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (464)
++++.|+||++ +|+|+||++++ +.+.+.+... ..+ . +.++..+.++.++++.. +..++.++.+++++++
T Consensus 232 di~~~s~sK~l--~g~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~----~~~~~~~~~~~~~~~~ 304 (393)
T TIGR01822 232 DIITGTLGKAL--GGASGGFTTAR-KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML----EASNELRDRLWANTRY 304 (393)
T ss_pred eEEEEEChHHh--hCCCcEEEEeC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHH
Confidence 68899999987 47899999985 4455544432 222 1 12333334444444321 1245567788889999
Q ss_pred HHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeec-CCHHH
Q 037587 341 LVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFAN-ITEET 417 (464)
Q Consensus 341 l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~-~~~e~ 417 (464)
+.+.|++.|+.+.++.++ ++.+.++.. ....+++..|+ ++||.+. +..|.. .+..++|++++. .++++
T Consensus 305 l~~~L~~~g~~~~~~~~~-~~~i~~~~~------~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~ed 375 (393)
T TIGR01822 305 FRERMEAAGFDIKPADHP-IIPVMLYDA------VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQ 375 (393)
T ss_pred HHHHHHHcCCCCCCCCCC-EEEEEeCCH------HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHH
Confidence 999998888877665555 555554431 12335777776 4599997 554532 233569999877 68999
Q ss_pred HHHHHHHHHHHHHhhC
Q 037587 418 LQVALQRIKVFAQSCN 433 (464)
Q Consensus 418 l~~~l~~l~~~l~~~~ 433 (464)
+++++++|++++++..
T Consensus 376 i~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 376 LDRAVEAFTRIGRELG 391 (393)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999877543
No 117
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=2e-28 Score=243.19 Aligned_cols=300 Identities=13% Similarity=0.167 Sum_probs=207.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
...+++.+|++++ + +.+++++|+++++..++.+++++||.|+++.+.|......++.. |++++.++.+.
T Consensus 53 ~~~~~e~lA~~~g--------~--~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~-g~~~~~~~~~~ 121 (370)
T TIGR02539 53 IHDFLEDLAEFLG--------M--DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERA-GLNVKEVPHTG 121 (370)
T ss_pred HHHHHHHHHHHhC--------C--CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHc-CCEEEEEecCC
Confidence 4678888888875 3 35677999999999999999999999999988865555556655 99999999865
Q ss_pred CCCcccCHHHHHHHHHHHhhc-CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTL-NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~-~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
+.+|.+|++.+++.+.+.... ..++++|++++|+||||...+ +++|+++|+++|+++|+||+|+.. .. + .
T Consensus 122 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g---~~--~-~ 192 (370)
T TIGR02539 122 HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVG---RM--P-V 192 (370)
T ss_pred cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccC---Cc--C-C
Confidence 557889999999998643211 136789999999999999865 667788888999999999999842 11 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCCh----------HHHHHHH
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSS----------QTQYLLS 314 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~----------~~q~~~~ 314 (464)
+.... +..++++||||+++ +|.|+||++++++ +.+.+.....++..+. ..+.++.
T Consensus 193 ~~~~~-------------~~di~v~s~sK~~~-~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (370)
T TIGR02539 193 SAKEI-------------GADFIVGSGHKSMA-ASGPCGVLGMSEE-WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMM 257 (370)
T ss_pred CHHHc-------------CCCEEEeeCccccc-CCCCEEEEEECHH-HHhhhcccccCCccceeeeecccccccHHHHHH
Confidence 21111 34466799999998 6778999999554 5554444433322211 1444444
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee---cCCccEEEEEecCcccc--cCChhHHHHHHHHHHHhcC
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL---KSNAGLFCWVDMRHLLV--SNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~g~f~~~~l~~~~~--~~~~~~~~~l~~~ll~~~g 389 (464)
.++.+. .++++..++.++.. +++.+.|+++|+++. ++.+ .|++++++.... ..+......+.+.| .++|
T Consensus 258 ~al~~~---~~~l~~~~~~~~~~-~~l~~~L~~~g~~~~~~~~s~t-~~v~~~~~~~~~~~~~~~~~~~~~~~~L-~e~G 331 (370)
T TIGR02539 258 ASFPHV---VERVKRWDEEVKKT-RWFVAELEDIGFIQLGQKPKEH-DLVKFETPGFHEIAQKHKRRGYFLYEEL-KKRG 331 (370)
T ss_pred HHHHHH---HHHHHHHHHHHHHH-HHHHHHHHhCCcEEEccCCCcC-ceEEEECCchhHHhhhhccccHHHHHHH-HhCC
Confidence 444321 33444444555554 589999999998753 4554 588888763100 00001122344554 5779
Q ss_pred eE-EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 390 LN-ISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 390 I~-v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
|. ++++ .++++||++...+++++++++++|+++++++
T Consensus 332 I~~ir~~------~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 332 IHGIRSG------QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred CccccCC------cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 97 6643 2468999973358999999999999988753
No 118
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=2.5e-28 Score=240.04 Aligned_cols=320 Identities=16% Similarity=0.107 Sum_probs=215.9
Q ss_pred ccc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHH
Q 037587 46 NQL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANET 124 (464)
Q Consensus 46 n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~ 124 (464)
|++ +++.+.+++.+.. .....|.+.....++++.++++++ ++++++++|+++++..
T Consensus 6 ~~~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~l~~~~a~~~g----------~~~~~~~~~gt~a~~~ 62 (338)
T cd06502 6 TVTGPTPEMLEAMAAAN-------------VGDDVYGEDPTTAKLEARAAELFG----------KEAALFVPSGTAANQL 62 (338)
T ss_pred cCCCCCHHHHHHHHhcc-------------cCCcccCCCHHHHHHHHHHHHHhC----------CCeEEEecCchHHHHH
Confidence 444 5577777766531 111256545556788888888774 4567778888899999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh-cCCceEEEEEeCCCC
Q 037587 125 LMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT-LNLKVKGVLITNPSN 200 (464)
Q Consensus 125 ~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~-~~~~~~~vil~~P~N 200 (464)
++.+++++||.|+++.|+|..+... .... |++++.++.+ .+.+|++++++.+.+... ..+++++|+++||||
T Consensus 63 ~~~~l~~~gd~v~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n 138 (338)
T cd06502 63 ALAAHTQPGGSVICHETAHIYTDEAGAPEFLS-GVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE 138 (338)
T ss_pred HHHHhcCCCCeEEEecCcceeeecCCcHHHHc-CceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecC
Confidence 9999999999999999998754432 2334 9999999864 256899999998864110 013678999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc
Q 037587 201 PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF 280 (464)
Q Consensus 201 PtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl 280 (464)
| |.+++.+++++|+++|+++|+++|+||+|........ . .++..+.. ...+++.|+||+||++|
T Consensus 139 ~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~--~-~~~~~~~~-----------~~d~~~~s~sK~~~~~~- 202 (338)
T cd06502 139 G-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAAL--G-VALKTYKS-----------GVDSVSFCLSKGGGAPV- 202 (338)
T ss_pred C-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhc--C-CCHHHHHh-----------cCCEEEEeccccCCCcc-
Confidence 7 6677999999999999999999999999864221111 1 12222211 22245789999999887
Q ss_pred EEEEEEecCHHHHHHHHHhc-cc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC
Q 037587 281 RVGMIYSNNERVVSAATKMS-SF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN 356 (464)
Q Consensus 281 RiG~l~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 356 (464)
|+++..++.+.+.+.... .+ +..+++.+.++...|+...+ .+..+.+.+.++++.+.|+++|+.+.++.
T Consensus 203 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 275 (338)
T cd06502 203 --GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLW-----LRRLRHDHEMARRLAEALEELGGLESEVQ 275 (338)
T ss_pred --ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchH-----HHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 554433555555554433 11 23456777778788876543 23334555667889999999888777777
Q ss_pred ccEEEEEecCcccccCChhHHHHHHHHHH--HhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 357 AGLFCWVDMRHLLVSNTFEAEKELWKKII--FEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 357 ~g~f~~~~l~~~~~~~~~~~~~~l~~~ll--~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
+| |+.++++.. . ....++...+. .++||.+.+.. .+++||+++. .++++++++++++++
T Consensus 276 ~~-~~~v~~~~~---~--~~~~~l~~~l~~~~~~gi~~~~~~------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 276 TN-IVLLDPVEA---N--AVFVELSKEAIERRGEGVLFYAWG------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CC-eEEEecCCc---c--HHHHHHHHHHHHhhhCCEEEEecC------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 77 666666421 1 11112333332 15699997652 2689999987 589999999998864
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=1.4e-27 Score=239.05 Aligned_cols=343 Identities=14% Similarity=0.112 Sum_probs=233.9
Q ss_pred CCCceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 34 NPSGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 34 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
+..++|||+.+.. .+ +++.+.+++.+.... . ......|....|..++++++++++.+..+ .++.
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~-----~----~~~~~~~~~~~g~~~l~~~l~~~l~~~~g-----~~~~ 96 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQ-----Y----GVGAGAVRTIAGTLRLHEELEEKLAKFKK-----TEAA 96 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHH-----c----CCCCCccCcccCCcHHHHHHHHHHHHHhC-----CCcE
Confidence 4567899998742 33 455666655553211 0 01134576778899999999999988765 2456
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|++++|+ +++..++.+++++||.|+++.|+|+.+...+... |+++..++ .+|++.+++.+.+. ..++++
T Consensus 97 i~~~sG~-~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~-g~~~~~~~-------~~d~~~l~~~l~~~--~~~~~~ 165 (385)
T TIGR01825 97 LVFQSGF-NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLT-KATKKIYK-------HADMDDLDRVLREN--PSYGKK 165 (385)
T ss_pred EEECcHH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhc-CCceEEeC-------CCCHHHHHHHHHhh--ccCCCe
Confidence 8888885 5666788889999999999999999887666655 87776653 36788888877642 123678
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++++||||.+.+ +++|.++|+++|+++|+||+|..+.++.. ..... .... . ..++++++.||
T Consensus 166 ~v~~~~v~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~-~~~~-~-------~~~~~i~~~s~ 231 (385)
T TIGR01825 166 LIVTDGVFSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEA--GRGTV-HHFG-L-------EDKVDIQVGTL 231 (385)
T ss_pred EEEEecCCcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCC--CCccH-hhcC-C-------CcCCcEEEEec
Confidence 8888888999999876 67788999999999999999986555422 10111 1111 1 23678999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhc-cc--C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMS-SF--G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV 347 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~--~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (464)
||++|++| ||+++++ .+.+.+.... .+ . ..++..+.++.++++... + ..+..+.+.++++++.+.|.+
T Consensus 232 sK~~~~~g---G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~---~-~~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 232 SKAIGVVG---GYAAGHK-ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQ---R-SPELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred cHHhhcCC---CEEecCH-HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh---c-CHHHHHHHHHHHHHHHHHHHH
Confidence 99998766 9998854 4544444332 22 2 234466666666654321 1 123445566788999999998
Q ss_pred CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeec-CCHHHHHHHHHH
Q 037587 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFAN-ITEETLQVALQR 424 (464)
Q Consensus 348 ~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~-~~~e~l~~~l~~ 424 (464)
.|+++..++++ ++++.++.. ....+++..|+++ ||.++ +..|+. .+..++|++++. .+++++++++++
T Consensus 304 ~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~ 374 (385)
T TIGR01825 304 LGYDTGGSETP-ITPVVIGDE------KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDA 374 (385)
T ss_pred cCCCCCCCCCC-EEEEEECCH------HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHH
Confidence 89988877776 555554421 1223577777755 99985 444442 234689998864 799999999999
Q ss_pred HHHHHHhh
Q 037587 425 IKVFAQSC 432 (464)
Q Consensus 425 l~~~l~~~ 432 (464)
|++++++.
T Consensus 375 l~~~~~~~ 382 (385)
T TIGR01825 375 YEKVGKEL 382 (385)
T ss_pred HHHHHHHh
Confidence 99998754
No 120
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=8.3e-28 Score=244.92 Aligned_cols=355 Identities=14% Similarity=0.159 Sum_probs=240.5
Q ss_pred CCCceEEeeccccc-c-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 34 NPSGIIQMGLAENQ-L-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 34 ~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
+..++|||+.+... + .++.+.+++.+....- +...-..-..|.+..++.+|+++||++++ .++.
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~-----G~g~~g~r~~yg~~~~~~~Lee~La~~~~---------~~~~ 172 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKY-----GVGSCGPRGFYGTIDVHLDCETKIAKFLG---------TPDS 172 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHh-----CCCCcccCccccCHHHHHHHHHHHHHHhC---------CCCE
Confidence 44678999976332 2 3455666655532210 10000111246666678999999999986 4678
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc---CC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL---NL 188 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~---~~ 188 (464)
|++++|.+ ++..++.+++++||.|++....|..+...+... |.+++.++.+ |.+.++..+++.... .+
T Consensus 173 i~~s~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls-~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~ 243 (481)
T PLN02822 173 ILYSYGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLS-RSTIVYFKHN-------DMESLRNTLEKLTAENKRKK 243 (481)
T ss_pred EEECCHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHc-CCeEEEECCC-------CHHHHHHHHHHHhhhhcccC
Confidence 99998887 578899999999999998887776666666655 8888888754 445566655543222 12
Q ss_pred ce-EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 189 KV-KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 189 ~~-~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++ ++|++..++|+||.+.+ +++|+++|++||+++|+||+|....++..+ ..+.+... . ...+..++
T Consensus 244 ~~~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G---~G~~e~~~-v------~~~~~dii 310 (481)
T PLN02822 244 KLRRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSG---RGLSEHFG-V------PIEKIDII 310 (481)
T ss_pred CCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCC---CChHHHcC-C------CCCCCeEE
Confidence 34 67777778999999988 788899999999999999999855565331 11112111 0 01245688
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc---ccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS---SFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~---~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
+.||||+||++| ||++++++ +.+.++... .++ +.++..+.++.++|+.. +. ..+.++.++++++++.+
T Consensus 311 ~~s~sKalg~~G---G~i~g~~~-ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l---~~-~~~~~~~l~~~~~~l~~ 382 (481)
T PLN02822 311 TAAMGHALATEG---GFCTGSAR-VVDHQRLSSSGYVFSASLPPYLASAAITAIDVL---ED-NPSVLAKLKENIALLHK 382 (481)
T ss_pred EecchhhhhhCC---eEEEcCHH-HHHHHHhcCCceeeccccCHHHHHHHHHHHHHH---Hh-CHHHHHHHHHHHHHHHH
Confidence 999999999889 99998554 555444322 222 12355666666666432 22 24677889999999999
Q ss_pred HHHhC-CCeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeCCC--CCCCC-CCCeEEEEeec-CCHH
Q 037587 344 GLKVA-GIRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISPGS--SCHCN-EPGWFRICFAN-ITEE 416 (464)
Q Consensus 344 ~l~~~-g~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~pg~--~f~~~-~~~~~Ris~~~-~~~e 416 (464)
.|.+. |+++..+.+++++++.++..... .+.....+++.+|++++||.+.|+. .|... .+.++|++++. .+++
T Consensus 383 ~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~e 462 (481)
T PLN02822 383 GLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTES 462 (481)
T ss_pred HHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHH
Confidence 99986 88887677788999998642111 1111234688888878899999763 33221 24579999876 6999
Q ss_pred HHHHHHHHHHHHHHhh
Q 037587 417 TLQVALQRIKVFAQSC 432 (464)
Q Consensus 417 ~l~~~l~~l~~~l~~~ 432 (464)
++++++++|++++.+.
T Consensus 463 dI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 463 DILKASESLKRVAASV 478 (481)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988764
No 121
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=7.8e-28 Score=242.03 Aligned_cols=295 Identities=16% Similarity=0.220 Sum_probs=210.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCC----hhhhcccCCCc
Q 037587 86 FPDAKKELVKLMARIRGNKVKF-DPNKLVLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPG----FDRDLKWRPGV 156 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~~g~ 156 (464)
..++|+.+|++++ + ++++|++|+|+++++.+++.++ +++||+|++++|.|+. +...++.. |+
T Consensus 65 ~~~~r~~la~~~g--------~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~ 135 (401)
T PRK10874 65 YEAAREQVAQLLN--------APDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQT-GA 135 (401)
T ss_pred HHHHHHHHHHHcC--------CCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHh-CC
Confidence 4678888888876 5 6889999999999999999998 3789999999999865 33444555 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+++.++++. ++.+|++++++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 136 ~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~ 204 (401)
T PRK10874 136 KVVKLPLGA--DRLPDVDLLPELITP------RTRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF 204 (401)
T ss_pred EEEEEecCC--CCcCCHHHHHHhcCc------CcEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc
Confidence 999999863 567899999998864 7899999999999999986 56788888899999999999973222
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc----------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS---------------- 300 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~---------------- 300 (464)
. .++..+ +..+++.|++|.+|.+| +||++++++ +.+.+....
T Consensus 205 ~------~~~~~~-------------~~d~~~~s~~K~~gp~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (401)
T PRK10874 205 P------ADVQAL-------------DIDFYAFSGHKLYGPTG--IGVLYGKSE-LLEAMSPWQGGGKMLTEVSFDGFTP 262 (401)
T ss_pred c------CCchhc-------------CCCEEEEecccccCCCc--cEEEEEchH-HHhcCCCeecCCcceEeeccCccCC
Confidence 1 121111 34577899999998777 599988554 333222110
Q ss_pred -------ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccC
Q 037587 301 -------SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSN 372 (464)
Q Consensus 301 -------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~ 372 (464)
..++.+...+.++.++++.-. +......+++.++.++++.+.|+++ |+.+..+..+.++++.++..
T Consensus 263 ~~~~~~~e~Gt~~~~~~~al~~al~~l~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~---- 336 (401)
T PRK10874 263 QSAPWRFEAGTPNVAGVIGLSAALEWLA--DIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV---- 336 (401)
T ss_pred CCChhhccCCCcCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc----
Confidence 012334445555555543211 1113345566677778888888887 88777555555666666531
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
. ..++...| .++||.|++|..+.. ...+++|||++. .++++++.+++.|++++++.
T Consensus 337 --~-~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 337 --H-HSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred --C-HHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 1 12455544 678999999886642 235799999987 78999999999999988753
No 122
>PLN02721 threonine aldolase
Probab=99.97 E-value=5.3e-28 Score=239.23 Aligned_cols=335 Identities=14% Similarity=0.167 Sum_probs=217.2
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
..+|+|+.|+++.|++.+.+++.... ......|+++ ...+|++++|++++ .+ .++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~~------------~~~~~~~~~~-~~~~l~~~la~~~~--------~~--~~~~~ 61 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANAE------------VDDDVLGYDP-TALRLEEEMAKIFG--------KE--AALFV 61 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhcc------------CCCcccCCCH-HHHHHHHHHHHHhC--------Cc--eeEEe
Confidence 35689999999988777777766420 0111233332 26899999999986 22 24455
Q ss_pred CChHHHHHHHHHHhcC-CCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC-Cce
Q 037587 116 AGSTAANETLMFCLAD-PGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN-LKV 190 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~-~~~ 190 (464)
+++++++..++.+++. +||.|++++|+|..... .+... |++++.++.+ .++.+|++.+++.+++....+ +++
T Consensus 62 ~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~ 138 (353)
T PLN02721 62 PSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENGGISTLG-GVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTT 138 (353)
T ss_pred cCccHHHHHHHHHHccCCCCeEEEcCccceehhcccchhhhc-CceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcc
Confidence 5555556677777777 99999999999854443 34444 9999998875 356789999999987421111 378
Q ss_pred EEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 191 KGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 191 ~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
++|+++++ |||||.++|.+++++|+++|+++|+++|+||+|....+... . .+...+.. ....++.
T Consensus 139 ~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~--~-~~~~~~~~-----------~~d~~~~ 204 (353)
T PLN02721 139 RLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVAL--G-VPVHRLVK-----------AADSVSV 204 (353)
T ss_pred eEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhh--C-CCHHHHhh-----------hCCEEEE
Confidence 89999775 78999999999999999999999999999999862111101 1 12222222 1223455
Q ss_pred CCCcCCCCCccEEEE-EEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGM-IYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 270 S~SK~~g~~GlRiG~-l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|+||.++. ++|+ +++ ++.+.+.+....... ..+...+.++..+.. + +++.+..++ ..++++.+.+.|+
T Consensus 205 s~sK~l~~---~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l-~~~~~~~~~-~~~~~~~l~~~L~ 275 (353)
T PLN02721 205 CLSKGLGA---PVGSVIVG-SKSFIRKAKRLRKTLGGGMRQVGVLAAAALVA---L-QENVPKLED-DHKKAKLLAEGLN 275 (353)
T ss_pred ecccccCC---ceeeEEec-CHHHHHhHHHHHHhcCCCeehhHHHHHHHHHH---H-HHHHHHHHH-HHHHHHHHHHHHH
Confidence 89999863 3576 455 455555444333322 122222222222211 1 222333333 3456678999998
Q ss_pred hC-CCee--ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHH
Q 037587 347 VA-GIRC--LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVAL 422 (464)
Q Consensus 347 ~~-g~~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l 422 (464)
++ ++.+ .++.++ |+|++++.... ....+++..|. ++||.++|+. .+++|++++. .+++++++++
T Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~L~-~~gi~v~~~~------~~~lR~~~~~~~~~~~i~~~~ 343 (353)
T PLN02721 276 QIKGLRVNVAAVETN-IVYFDITDGSR----ITAEKLCKSLE-EHGVLLMPGN------SSRIRVVTHHQISDSDVQYTL 343 (353)
T ss_pred hCCCcEEecCCccce-EEEEEccCCcc----ccHHHHHHHHH-hCCcEEecCC------CceEEEEecCcCCHHHHHHHH
Confidence 87 6744 445554 79999874210 11235677775 7899999874 4589999974 7899999999
Q ss_pred HHHHHHHHh
Q 037587 423 QRIKVFAQS 431 (464)
Q Consensus 423 ~~l~~~l~~ 431 (464)
++|++++..
T Consensus 344 ~~l~~~~~~ 352 (353)
T PLN02721 344 SCFQQAALT 352 (353)
T ss_pred HHHHHHhhc
Confidence 999988753
No 123
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.8e-27 Score=239.20 Aligned_cols=295 Identities=15% Similarity=0.186 Sum_probs=207.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCC----hhhhcccCCCc
Q 037587 86 FPDAKKELVKLMARIRGNKVKF-DPNKLVLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPG----FDRDLKWRPGV 156 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~~g~ 156 (464)
..++|+.+|++++ + ++++|++|+|+++++.+++.++ +++||+|++++|+|+. +...++.. |+
T Consensus 62 ~~~~r~~la~~~g--------~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~-g~ 132 (398)
T TIGR03392 62 YELARQQVARFLN--------APDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQT-GA 132 (398)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHc-Cc
Confidence 4568889998886 4 4789999999999999999987 4789999999999875 33344555 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+++.++++. ++.+|++.+++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+
T Consensus 133 ~v~~v~~~~--~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~ 201 (398)
T TIGR03392 133 KVVKLPIGA--DLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG 201 (398)
T ss_pred EEEEEecCC--CCCcCHHHHHHHhcc------CceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC
Confidence 999999864 456899999998864 7899999999999999986 56688889999999999999973221
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc----------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS---------------- 300 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~---------------- 300 (464)
. .++..+ +..+++.|++|.+|.+| +||++++++ +.+.+....
T Consensus 202 ~------~~~~~~-------------~~d~~~~s~~K~~gp~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (398)
T TIGR03392 202 P------PDVQAL-------------DIDFYAFSGHKLYGPTG--IGVLYGKTE-LLEAMPPWQGGGKMLSHVSFDGFIP 259 (398)
T ss_pred C------CChhhc-------------CCCEEEEecccccCCCc--eEEEEEcHH-HHhhCCCeecCCceEeecccccccc
Confidence 1 122111 34567789999998666 899998554 333222110
Q ss_pred -------ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccC
Q 037587 301 -------SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSN 372 (464)
Q Consensus 301 -------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~ 372 (464)
..++.+.....++.++++--. +...++.+++.++.++++.+.|.++ |+.+..+..+.++++.++.. .
T Consensus 260 ~~~~~~~e~GT~~~~~~~a~~~al~~l~--~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-~-- 334 (398)
T TIGR03392 260 QAVPHRFEAGTPNIAGVIGLSAALEWLT--DIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-H-- 334 (398)
T ss_pred CCChhhccCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-C--
Confidence 011233333344444333110 1113345566666777888888876 77776544455676666531 1
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..++...| .++||.|++|..+.. +.++++|||++. .++++++.+++.|++++++.
T Consensus 335 ----~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 335 ----HSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred ----HHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 12455554 678999999886542 225799999977 78999999999999988764
No 124
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=7.2e-28 Score=242.75 Aligned_cols=342 Identities=14% Similarity=0.112 Sum_probs=224.1
Q ss_pred ceEEeecc-ccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 37 GIIQMGLA-ENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 37 ~~i~l~~~-~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
..++|+.| .++++ +|.+.+++.+..+.. +.........|+......+|++.||++++ .++.|++
T Consensus 47 ~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~-----~~~~~~s~~~~~~~~~~~~Le~~la~~~g---------~~~~i~~ 112 (410)
T PRK13392 47 RVTIWCSNDYLGMGQHPDVIGAMVDALDRY-----GAGAGGTRNISGTSHPHVLLERELADLHG---------KESALLF 112 (410)
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHHHHHc-----CCCCchhhhcccChHHHHHHHHHHHHHhC---------CCCEEEE
Confidence 46777764 55553 466666665542210 00000011123332235788899998885 3567888
Q ss_pred eCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 115 TAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+ +++..++..+.. +|+.|+++.+.|..+...+... |+++..++.+ |.+.+++.++.. ..+++++
T Consensus 113 ~sG~-~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~-g~~~~~~~~~-------d~~~l~~~l~~~--~~~~t~~ 181 (410)
T PRK13392 113 TSGY-VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRS-GAEKQVFRHN-------DLADLEEQLASV--DPDRPKL 181 (410)
T ss_pred CcHH-HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHc-CCeEEEEeCC-------CHHHHHHHHHhc--cCCCCEE
Confidence 8775 566666666643 8898888877777666666655 8887766421 455666666532 1237889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.+++ +++|.++|+++++++|+||+|....++..+ ..+..... . .....++++|||
T Consensus 182 v~i~~~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g---~g~~~~~~-~-------~~~~div~~tls 247 (410)
T PRK13392 182 IAFESVYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARG---GGIAERDG-L-------MDRIDMIQGTLA 247 (410)
T ss_pred EEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCC---Cchhhhcc-C-------CCCCcEEEEECh
Confidence 999999999999987 667788888999999999999844444321 11111111 0 112237789999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc---C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF---G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~---~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|+||++| ||++++ +.+.+.+++.... . ..+++.+.++.++|+.... ....++.++++++++.+.|++.
T Consensus 248 K~~g~~G---G~~~~~-~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~----~~~~~~~~~~~~~~l~~~L~~~ 319 (410)
T PRK13392 248 KAFGCLG---GYIAAS-ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT----SQTERDAHQDRVAALKAKLNAN 319 (410)
T ss_pred Hhhhccc---chhhcC-HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHc
Confidence 9999888 999884 4555555554432 1 2344667777777764332 2345577788889999999999
Q ss_pred CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
|+++.++++++ +.+.++.. ....+++.+|++++||.++++..... .+.+++||++.. .++++++.++++|+
T Consensus 320 g~~~~~~~~~~-~~i~~~~~------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 320 GIPVMPSPSHI-VPVMVGDP------TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred CCCCCCCCCCE-EEEEeCCH------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 99888888874 44444321 12335777787778999998654322 234689999965 58999999999999
Q ss_pred HHHHhh
Q 037587 427 VFAQSC 432 (464)
Q Consensus 427 ~~l~~~ 432 (464)
+++++.
T Consensus 393 ~~~~~~ 398 (410)
T PRK13392 393 AIWDRL 398 (410)
T ss_pred HHHHHc
Confidence 987654
No 125
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-27 Score=223.17 Aligned_cols=350 Identities=17% Similarity=0.269 Sum_probs=254.4
Q ss_pred CCCCCCCCCceEEeeccc--cccc----HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHc
Q 037587 28 PYDQLHNPSGIIQMGLAE--NQLS----FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIR 101 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~--n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 101 (464)
.|..+..+.. |||+++. |... .+.++++-+...+ -.....|-+..|.+++++++++.+-
T Consensus 19 ~f~~D~R~~K-VNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~-----------~~~~k~Yl~i~G~~~f~~~~~~llF--- 83 (396)
T COG1448 19 AFKADPRPNK-VNLGIGVYKDEDGKTPVLRAVKKAEKRLLE-----------QEKTKNYLPIEGLPEFLEAVQKLLF--- 83 (396)
T ss_pred HHhcCCCcCe-eeeeeeeeeCCCCCcchhHHHHHHHHHhhc-----------cccccccCCcCCcHHHHHHHHHHhc---
Confidence 3555555544 9999873 2222 2445554444321 1345679999999999999999973
Q ss_pred CCCCC-CCCCc--EEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHH
Q 037587 102 GNKVK-FDPNK--LVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISAL 176 (464)
Q Consensus 102 ~~~~~-~~~~~--i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 176 (464)
|...+ +..+. -+=|.|+|.|+......+. .+..+|.+++|+|+.+..++... |.++..+|+-....-.+|.+.+
T Consensus 84 G~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~a-Gl~v~~Y~Yyd~~~~~~df~~m 162 (396)
T COG1448 84 GADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAA-GLEVETYPYYDAETKGLDFDGM 162 (396)
T ss_pred CCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhc-CCceeeeeccccccccccHHHH
Confidence 21111 22333 3458999999998877663 45677999999999999999877 9999999975444556899999
Q ss_pred HHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 177 ENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
.+.+++++ .-.+|++--+ |||||.-++.++|++|+++.++.+.+.+.|-+|.++.-+-. .....+..++...
T Consensus 163 la~L~~a~----~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Gle-eDa~~lR~~a~~~-- 235 (396)
T COG1448 163 LADLKTAP----EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLE-EDAYALRLFAEVG-- 235 (396)
T ss_pred HHHHHhCC----CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchH-HHHHHHHHHHHhC--
Confidence 99988752 2333444333 99999999999999999999999999999999998432211 1223333333321
Q ss_pred CCCCCCCCcEEEEcCCCcCCCCCccEEEEEE--ecCHHHHHHH----H--HhcccCCCChHHHHHHHHHcCCchhhHHH-
Q 037587 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMIY--SNNERVVSAA----T--KMSSFGLVSSQTQYLLSRMLSDKKFTCNY- 326 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~--~~~~~~~~~~----~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~- 326 (464)
.-+++..||||.||+-|-|+|.+. +.++.....+ + .+..+.+++.....+++.+|+++++...|
T Consensus 236 -------~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~ 308 (396)
T COG1448 236 -------PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWE 308 (396)
T ss_pred -------CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHH
Confidence 348889999999999999999874 4444433322 1 12345556667888999999998764444
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 327 --MKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 327 --~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
+..+|.++.++|..|.+.|++. .+.++..+.|||.+..++. +...+|.+++||++..
T Consensus 309 ~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~-----------~QV~rLree~~IY~v~------ 371 (396)
T COG1448 309 QELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLSP-----------EQVDRLREEFGIYLVA------ 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCCCH-----------HHHHHHHHhccEEEec------
Confidence 4457899999999999999984 4778889999999886653 3567888899999873
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
.| |||++.+++..++.+.++|.++
T Consensus 372 --sG--Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 372 --SG--RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred --CC--eeeeccCChhhHHHHHHHHHhh
Confidence 33 9999999999999999998875
No 126
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.9e-27 Score=242.85 Aligned_cols=310 Identities=15% Similarity=0.131 Sum_probs=215.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEI 158 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~ 158 (464)
.|+...+..+|++++|++++ .++.|++++|... +..++.+++++||.|++++|+|..+...++.. |+++
T Consensus 141 ~~g~~~~~~ele~~lA~~~g---------~~~ai~~~~G~~a-n~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~-Ga~v 209 (489)
T PLN02483 141 DGGTTKLHRELEELVARFVG---------KPAAIVFGMGYAT-NSTIIPALIGKGGLIISDSLNHNSIVNGARGS-GATI 209 (489)
T ss_pred ccCCcHHHHHHHHHHHHHhC---------CCcEEEECCHHHH-HHHHHHHhCCCCCEEEEcchhhHHHHHHHHHc-CCeE
Confidence 47766778999999999996 4667888777554 44777889999999999999999998888876 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhc------CCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTL------NLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~------~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
+.++.+ |.+.+++.+++.... .+..++++++++ .|++|... ++++|+++|+++|+++|+||+|
T Consensus 210 ~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~ 279 (489)
T PLN02483 210 RVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAH 279 (489)
T ss_pred EEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcC
Confidence 998843 467777766543211 112356666666 59999885 5788889999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc---cC-CCCh
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS---FG-LVSS 307 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~---~~-~~s~ 307 (464)
+...++..+ ....++.. . +..+.+++++||||+||++| ||++++ +.+.+.++.... +. ..++
T Consensus 280 s~g~~G~~G---~g~~~~~~-v------~~~~~dI~~~SfSKs~g~~G---G~i~~~-~~li~~l~~~~~~~~~~~~~~p 345 (489)
T PLN02483 280 SIGAVGKTG---RGVCELLG-V------DPADVDIMMGTFTKSFGSCG---GYIAGS-KELIQYLKRTCPAHLYATSMSP 345 (489)
T ss_pred ccCccCCCC---CchHHhcC-C------CcccCcEEEEecchhcccCc---eEEEcC-HHHHHHHHHhCccccccCCcCH
Confidence 743333221 11222211 0 12357799999999999877 999985 445555554321 22 2233
Q ss_pred -HHHHHHHHHc---CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHH
Q 037587 308 -QTQYLLSRML---SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 308 -~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
..|. +.+.+ ...+- .+...++++.++++++++.+.|+++|+.+..+.++..+|+.+.... ...+++..
T Consensus 346 ~~~~~-~~aaL~~l~~~~g-~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~~~l~l~~~~------~~~~~~~~ 417 (489)
T PLN02483 346 PAVQQ-VISAIKVILGEDG-TNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPA------KIPAFSRE 417 (489)
T ss_pred HHHHH-HHHHHHHHHhCcc-ccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCEEEEEECCHH------HHHHHHHH
Confidence 3333 33333 21110 1224455778999999999999999988876666667777654321 12257777
Q ss_pred HHHhcCeEEeCCCCCC--CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 384 IIFEVGLNISPGSSCH--CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~--~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|+ ++||.|.| ..|. +...+++||+++. .++|++++++++|+++++..+
T Consensus 418 Ll-~~GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 418 CL-KQNVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred HH-HCCcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 76 56999997 4443 2234789999986 789999999999999988766
No 127
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.96 E-value=6e-27 Score=234.44 Aligned_cols=340 Identities=14% Similarity=0.120 Sum_probs=221.5
Q ss_pred CCCceEEeeccccc-c-cHHHHHHHHHhhhhhHHhhhccccccc-ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 34 NPSGIIQMGLAENQ-L-SFDLLESWLASNQEAVELKRNGESLFR-ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 34 ~~~~~i~l~~~~n~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
....+|||+.+.|. + +++.+.+++.+.... .. ....|....|...+++.+++.+.+.++ .++
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-----~~~ 101 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARR----------YGAGSGGSRLVTGNSPAHEALEEELAEWFG-----AER 101 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHh----------cCCCCCCcCcccCCcHHHHHHHHHHHHHhC-----CCc
Confidence 56788999998763 2 446677766654211 00 011222223434444444444444333 245
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.|++++ +++++..++.+++++||.|+++.|+|+.+...+... |++++.++. .|++.+++.++.. .++.
T Consensus 102 ~i~~~~-g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~i~~~---~~~~ 169 (385)
T PRK05958 102 ALLFSS-GYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLS-RARVRRYPH-------NDVDALEALLAKW---RAGR 169 (385)
T ss_pred EEEECc-HHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhc-CCceEEeCC-------CCHHHHHHHHHhc---cCCC
Confidence 555555 555666677888999999999999999888777765 888888764 3788888887641 1134
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
.++++.+++||||...+ +++|+++|+++|+++|+||+|....+...+..+.....+ . ..++++++.|
T Consensus 170 ~lvi~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~-~---------~~~~~i~~~s 236 (385)
T PRK05958 170 ALIVTESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGL-A---------GEPDVILVGT 236 (385)
T ss_pred eEEEEEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCC-C---------CCCceEEEEe
Confidence 55566677999998754 778889999999999999999754443221011111111 1 2367899999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhc-ccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMS-SFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|||.||++| ||++++ +.+.+.+.... .+. ..++..+.++.++++.... ....++.+.++++++.+.|+
T Consensus 237 ~sK~~~~~G---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~----~~~~~~~~~~~~~~l~~~L~ 308 (385)
T PRK05958 237 LGKALGSSG---AAVLGS-ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR----EPERRERLAALIARLRAGLR 308 (385)
T ss_pred chhhcccCC---cEEEcC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 999999777 999885 44544443322 221 2334444445555543221 13456778888899999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQVALQR 424 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~~l~~ 424 (464)
+.|+++.++.++ |+|+.++.. ....+++..+. ++||.|.++..+.. .+.+++||+++. .++++++.++++
T Consensus 309 ~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~ 380 (385)
T PRK05958 309 ALGFQLMDSQSA-IQPLIVGDN------ERALALAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEA 380 (385)
T ss_pred HcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHH
Confidence 888887777665 778887631 12335777775 67999998654432 235689999975 689999999999
Q ss_pred HHHHH
Q 037587 425 IKVFA 429 (464)
Q Consensus 425 l~~~l 429 (464)
|++++
T Consensus 381 l~~~~ 385 (385)
T PRK05958 381 LAEAL 385 (385)
T ss_pred HHhcC
Confidence 98753
No 128
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.96 E-value=2.7e-27 Score=221.48 Aligned_cols=325 Identities=18% Similarity=0.258 Sum_probs=216.4
Q ss_pred cccccC-CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHH-HHHHH-HHh----cC--------CCCeEEEc
Q 037587 75 RELALF-QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAA-NETLM-FCL----AD--------PGDAFLLP 139 (464)
Q Consensus 75 ~~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~a-l~~~~-~~l----~~--------~gd~Vlv~ 139 (464)
.+..+| +...|.+++|+-.|+.++ ++++||+++..|+-. ++-++ .++ .+ +.-+.|+|
T Consensus 59 ~D~RNY~G~l~Gipe~r~l~a~llg--------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 59 TDCRNYPGGLDGIPEARELFAELLG--------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp EBTTSS-S-SS--HHHHHHHHHHHT--------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred ccccCCCCccCChHHHHHHHHHHhC--------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 356789 888999999999999997 789999987665543 33322 222 11 12479999
Q ss_pred CCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe-CCCCCCCCCCCHHHHHHHHHH-
Q 037587 140 TPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT-NPSNPLGTAMTHQELNHLINF- 217 (464)
Q Consensus 140 ~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~-~P~NPtG~~~s~~~l~~i~~~- 217 (464)
.|+|..+..+.+.. |++.++||+.+++ +|.+.+++.+.+ ++.+|.+++. --+||||.+||.+.+++++.+
T Consensus 131 vPGYDRHFai~E~~-Giemi~VpM~~dG---PDmD~Ve~LV~~----D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 131 VPGYDRHFAITEHF-GIEMIPVPMTEDG---PDMDMVEELVAE----DPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp ES--HHHHHHHHHC-T-EEEEEEEETTE---E-HHHHHHHTHT----STTEEEEEE-SSS-TTT-----HHHHHHHHHS-
T ss_pred CCCchHHHHHHHhh-CcEEEecCCCCCC---CCHHHHHHHHhc----CCccceEEeCCCccCCCCccCCHHHHHHHhcCC
Confidence 99999999999887 9999999998654 899999998753 5688987654 238999999999999999988
Q ss_pred HhhCCeEEEEeccccccccC-CCCC-CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH
Q 037587 218 SKSKRIHIVSDEIYSGTVFD-SPSS-SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA 295 (464)
Q Consensus 218 ~~~~~~~lI~Deay~~~~~~-~~~~-~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~ 295 (464)
....+.-|+.|.+|+-..+. ..+. ....+.....+- +++++++.+.|+||+. +||-+|+++.++.+.+...
T Consensus 203 ~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A------Gnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~ 275 (425)
T PF12897_consen 203 TAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA------GNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWI 275 (425)
T ss_dssp -SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT------T-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHH
T ss_pred cCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc------CCCCeEEEEecccccc-cCCcceeeeecCHHHHHHH
Confidence 34579999999999866662 2211 123566666543 4789999999999997 5999999999977766665
Q ss_pred HHHhccc-CCCChHHHHHHHHHcCCch-hhHHHHHHHHHHHHHHHHHHHHHHHhC-C-----CeeecCCccEEEEEecCc
Q 037587 296 ATKMSSF-GLVSSQTQYLLSRMLSDKK-FTCNYMKENRKRLRKRKEMLVSGLKVA-G-----IRCLKSNAGLFCWVDMRH 367 (464)
Q Consensus 296 ~~~~~~~-~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-g-----~~~~~~~~g~f~~~~l~~ 367 (464)
.+.+..- ....-+.|..-..++.+.+ -+++|+++.++.++-+.+.+.+.|++. | .+|..|.||+|+++++.+
T Consensus 276 ~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~ 355 (425)
T PF12897_consen 276 KKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD 355 (425)
T ss_dssp HHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST
T ss_pred HHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC
Confidence 4443322 2356689999999999976 668999999999999988888888764 3 488899999999999986
Q ss_pred ccccCChhHHHHHHHHHHHhcCeEEeC-CCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 368 LLVSNTFEAEKELWKKIIFEVGLNISP-GSSCHCN---EPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 368 ~~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f~~~---~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
... .-...+.++.||.+.| |..|... .+..+||+.+.++.++++.+++.+..+++
T Consensus 356 G~A--------krvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 356 GTA--------KRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp T-H--------HHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred ChH--------HHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 432 2345667899999998 6666642 24579999998899999999999887764
No 129
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=2.4e-27 Score=238.25 Aligned_cols=342 Identities=15% Similarity=0.135 Sum_probs=221.3
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||..+ .+.+. .+.+.+++.+.... .. +....+..++++++++++.+..+
T Consensus 32 ~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~-------------~~-~~~~~~~~~~~~~la~~l~~~~~-- 95 (396)
T PRK02627 32 RLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAK-------------LI-HTSNLYYIEPQEELAEKLVELSG-- 95 (396)
T ss_pred EEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhh-------------cc-ccccccCCHHHHHHHHHHHhhcC--
Confidence 4444456778999875 33443 36677766654211 11 11112236888888888876533
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCC-------CeEEEcCCCCCChhhhcccCCCcEEEEEecCC-CCCc----ccC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLADPG-------DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS-SNGF----RIT 172 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~-~~~~----~~d 172 (464)
.+++++|+|+++++..+++++...+ ++|++..++|.++........+.........+ ..++ ..|
T Consensus 96 ----~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (396)
T PRK02627 96 ----MDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFND 171 (396)
T ss_pred ----CCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCC
Confidence 4799999999999999999765433 67999999998775543333122211111110 0121 127
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
++.+++.+.+ ++++|++..++||+| ..++.+.+++|.++|+++|+++|+||+|.++.+.+. . .+. ....
T Consensus 172 ~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~--~-~~~-~~~~ 241 (396)
T PRK02627 172 IEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK--L-FAY-QHYG 241 (396)
T ss_pred HHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc--e-eee-hhcC
Confidence 8888888743 789999988899999 688999999999999999999999999997544332 1 111 1111
Q ss_pred ccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 252 DRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 252 ~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
..+. +.||||.++ +|+|+||++++++ +.+.+.. ....+..+++.|.++.++++.... .++.++
T Consensus 242 ---------~~pd---i~t~sK~~~-~G~rig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~ 306 (396)
T PRK02627 242 ---------IEPD---IMTLAKGLG-GGVPIGAVLAKEK-VADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLEN 306 (396)
T ss_pred ---------CCCC---EEEEcchhh-CCcccEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHH
Confidence 1122 347999999 9999999999544 5454432 223345788899998888764321 222333
Q ss_pred HHHHHHHHHHHHHHHHHhCCC-eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 330 NRKRLRKRKEMLVSGLKVAGI-RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
.++..+..++.+.+.+.+++. .... ..|+|+|++++. ...+++..+++ +||.+.|+. .+++||
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~i~~~~--------~~~~~~~~l~~-~Gv~v~~~~------~~~lRi 370 (396)
T PRK02627 307 AAEVGEYLRAKLRELLEKYPGIKEVR-GLGLMIGIELDR--------PAAEIVKKALE-KGLLINVTG------DNVLRL 370 (396)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeec-cCcEEEEEEecC--------cHHHHHHHHHH-CCeEEeecC------CCEEEE
Confidence 333333333444444443422 2223 346789998832 12357777765 599999863 367999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHHHh
Q 037587 409 CFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 409 s~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+++. .+++++++++++|++++++
T Consensus 371 ~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 371 LPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ECCcccCHHHHHHHHHHHHHHHHh
Confidence 9763 6899999999999998865
No 130
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=1.2e-26 Score=233.62 Aligned_cols=348 Identities=14% Similarity=0.116 Sum_probs=228.3
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
..|+|..++|.+++ .+.+++....... .. .+ ......|....+.+.+++.+++.+.+.+| ++..+|++++
T Consensus 20 ~~~~~~~~~~~~~~-~v~~a~~~~~~~~-~~-~g---~~~~~~~~~~~~~~~l~~~~~~~~~~~~g----~~~~~v~~~s 89 (402)
T cd00378 20 ETLELIASENFTSP-AVMEAMGSDLTNK-YA-EG---YPGKRYYGGCEYVDEIEDLAIERAKKLFG----AEYANVQPHS 89 (402)
T ss_pred hCeeeeccCCcCCH-HHHHHhccccccc-cc-CC---CCCCcccCCchHHHHHHHHHHHHHHHHhC----CCceeeecCC
Confidence 35888888877755 4555544321000 00 00 01122354555667788877777766665 4455566665
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-----cccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCce
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-----LKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+++++..++.+++++||+|+++.|+|+.+... +... |.++..++++.+ +++.+|++.+++.+.+ +++
T Consensus 90 -gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~id~~~l~~~i~~-----~~~ 162 (402)
T cd00378 90 -GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSAS-GKLFESVPYGVDPETGLIDYDALEKMALE-----FKP 162 (402)
T ss_pred -cHHHHHHHHHHhcCCCCEEEEecCccCcccccccccccccc-ceeEEEecCCcCcccCCcCHHHHHHHHHh-----CCC
Confidence 57999999999999999999999999876443 4444 887777776544 2688999999998864 268
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc-cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY-SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++++++|+||+. .++++|+++|+++|+++|+|++| .++.+.+. .... + . ...++++
T Consensus 163 ~~v~~~~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~--~~~~---~-~-----------~~dv~~~ 220 (402)
T cd00378 163 KLIVAGASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGV--FPNP---L-P-----------GADVVTT 220 (402)
T ss_pred CEEEecCcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhccc--CCCc---c-c-----------CCcEEEe
Confidence 8889889988753 24788999999999999999996 43323221 1111 1 0 1126789
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCCh-HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSS-QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|+||++ +|+|.||++++++.+.+.+......+ ..+. ..+.++..++.. ......++.++.+.++++++.+.|.
T Consensus 221 s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~--~~~~~~~~~~~~~~~~~~~l~~~L~ 296 (402)
T cd00378 221 TTHKTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKE--ALEPEFKAYAKQVVENAKALAEALK 296 (402)
T ss_pred ccccCC--CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987 78999999997745655554433222 1222 222222222221 1111355667778889999999999
Q ss_pred hCCCeee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC----CCCCCeEEEEeecC-----CHH
Q 037587 347 VAGIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH----CNEPGWFRICFANI-----TEE 416 (464)
Q Consensus 347 ~~g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~----~~~~~~~Ris~~~~-----~~e 416 (464)
+.|+.+. .+.+++|+|++++.... . . +.+.++++++||.+.++.... ...+.++||++... +++
T Consensus 297 ~~g~~~~~~~~~~~~v~v~~~~~~~----~-~-~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~ 370 (402)
T cd00378 297 ERGFKVVSGGTDNHLVLVDLRPKGI----T-G-KAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEE 370 (402)
T ss_pred hCCCeEeecCCCCeEEEEeCCccCC----C-H-HHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHH
Confidence 9998876 45678899999974211 1 1 133455678899998643211 11346799998653 489
Q ss_pred HHHHHHHHHHHHHHhhC
Q 037587 417 TLQVALQRIKVFAQSCN 433 (464)
Q Consensus 417 ~l~~~l~~l~~~l~~~~ 433 (464)
+++.+++.|++++++.+
T Consensus 371 di~~~~~~l~~~~~~~~ 387 (402)
T cd00378 371 EMEEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999887766
No 131
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=6.4e-27 Score=231.99 Aligned_cols=298 Identities=13% Similarity=0.159 Sum_probs=203.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..++++.+|++++ + +++++|+|+++++..++.+++++||.|+++.++|......+... |++++.++.+.
T Consensus 46 ~~~l~~~la~~~g--------~--~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~ 114 (361)
T cd06452 46 IKDFHHDLAEFLG--------M--DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERA-GLNVREVPNTG 114 (361)
T ss_pred HHHHHHHHHHHcC--------C--ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhc-CCEEEEEecCC
Confidence 4788999999875 3 78999999999999999999999999999999887666666666 99999999876
Q ss_pred CCCcccCHHHHHHHHHHHhhc-CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTL-NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~-~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
+++|.+|++.+++++++.... ++++++|++++|+||||... ++++|+++|+++|+++|+|++|.. +.. + .
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~---g~~--~-~ 185 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTV---GRM--P-V 185 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCccc---CCc--C-C
Confidence 556789999999988643211 23688999999999999874 577888899999999999999973 221 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCCh----------HHHHHHH
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSS----------QTQYLLS 314 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~----------~~q~~~~ 314 (464)
+...+ +..++++|+||+++ +|.|+||++++++ +.+.+.+...++.++. ..+.++.
T Consensus 186 ~~~~~-------------~~d~~~~s~~K~l~-~~~~~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T cd06452 186 SGKEL-------------GADFIVGSGHKSMA-ASAPIGVLATTEE-WADIVFRTSQMFKIKEVELLGCTLRGAPLVTLM 250 (361)
T ss_pred CHHHc-------------CCCEEEecCCcccc-CCCCeEEEEECHH-HHHHHhccccccccceeeeeccccCchHHHHHH
Confidence 21111 45688999999998 5669999999654 4444444332221111 1122222
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee---cCCccEEEEEecCcccccC--ChhHHHHHHHHHHHhc
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL---KSNAGLFCWVDMRHLLVSN--TFEAEKELWKKIIFEV 388 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~---~~~~g~f~~~~l~~~~~~~--~~~~~~~l~~~ll~~~ 388 (464)
..+. +..++++...+.+ ++.+++.+.|+++ |++++ ++.++ |+.++.+...... ......++...|+ ++
T Consensus 251 ~al~---~~~~~~~~~~~~~-~~~~~l~~~L~~l~g~~v~~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~ 324 (361)
T cd06452 251 ASFP---HVKERVKRWDEEV-EKARWFVAELEKIEGIKQLGEKPKNHD-LMFFETPSFDEIAKKHKRRGYFLYSELK-KR 324 (361)
T ss_pred HHHH---HHHHHHHHHHHHH-HHHHHHHHHHhcCCCeEEECCCCCCCc-eEEEEcCCcchhhhhccccchhHHHHHH-Hc
Confidence 2222 1122333333332 3447888999998 88886 34444 6667765211000 0001113666664 56
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 389 GLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
||.+.. ....+++|+++...++++++.++++|+++.
T Consensus 325 gI~~~~-----~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 325 GIHGIK-----PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CceEEc-----CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 999532 123458999993358999999999998764
No 132
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.96 E-value=1.5e-26 Score=231.15 Aligned_cols=334 Identities=16% Similarity=0.133 Sum_probs=209.5
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+|||..+ .|+++ .+.+.+++.+..... ......|++. -..+|.+++++++ +
T Consensus 20 ~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~---------~~~~~~~~~~-~~~~l~~~la~~~----g-- 83 (379)
T TIGR00707 20 YVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL---------VHVSNLYYTE-PQEELAEKLVEHS----G-- 83 (379)
T ss_pred EEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhc---------cccccccCCH-HHHHHHHHHHhhC----C--
Confidence 3333445678999875 55554 356666655532110 0011234321 2344555555544 3
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---C----CCCeEEEcCCCCCChhhhcccCCCcEEE----EEecCCCCCccc--
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA---D----PGDAFLLPTPYYPGFDRDLKWRPGVEIV----PIHCSSSNGFRI-- 171 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~~g~~~~----~v~~~~~~~~~~-- 171 (464)
.+++++++|+++++..++.++. . +||+|++++|+|+++...+... +.... ..++..+..+..
T Consensus 84 ----~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00707 84 ----ADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSA-TGQPKYQKGFEPLVPGFSYAPYN 158 (379)
T ss_pred ----CCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHh-cCChhhhccCCCCCCCceeeCCC
Confidence 2489999999999999988652 2 3799999999998776554433 32221 122221111111
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhh
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAV 250 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~ 250 (464)
|++.+++.+.+ ++++|+++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+. . .+. ...
T Consensus 159 d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~--~-~~~-~~~ 228 (379)
T TIGR00707 159 DIESLKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK--F-FAY-EHY 228 (379)
T ss_pred CHHHHHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--h-hhH-Hhc
Confidence 78999988865 78888886556677764 6899999999999999999999999987544322 1 111 111
Q ss_pred hccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCchhhHHHHH
Q 037587 251 MDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDKKFTCNYMK 328 (464)
Q Consensus 251 ~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 328 (464)
. ..+++ .||||.++ +|+|+||++++ +.+.+.+... ...+..+++.|.++.++|+..+. .
T Consensus 229 ~---------~~~d~---~t~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~-----~ 289 (379)
T TIGR00707 229 G---------IEPDI---ITLAKGLG-GGVPIGATLAK-EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK-----E 289 (379)
T ss_pred C---------CCCCE---EEEccccc-CCcccEEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh-----h
Confidence 1 11233 27899999 99999999995 4455555432 22334678899888877752110 1
Q ss_pred HHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 037587 329 ENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG 404 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~ 404 (464)
+.++.++++++.+.+.|.+. ++...+ ..|.|+|++++.. ..++...| .++||.+.|+. .+
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l-~~~Gv~v~~~~------~~ 353 (379)
T TIGR00707 290 RLLENVKEKGDYFKERLEELGKNYPNKEVR-GKGLMLGIELEAP--------CKDIVKKA-LEKGLLVNCAG------PK 353 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCccc-cCceEEEEEecCc--------HHHHHHHH-HHCCcEEeeCC------CC
Confidence 23344444555555555443 332222 3467899988631 12466665 57899999853 46
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 405 WFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 405 ~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
++||+++. .+++++++++++|+++
T Consensus 354 ~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 354 VLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHh
Confidence 89999865 6899999999999875
No 133
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=3e-26 Score=226.93 Aligned_cols=294 Identities=17% Similarity=0.165 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
.++++.++++++ +++ +.+++++|+++++..++.+++.+||.|+++.++|.. +...++.. |++++.++.
T Consensus 35 ~~~~~~la~~~g--------~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 105 (356)
T cd06451 35 DEILEGLRYVFQ--------TENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERY-GADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHhc--------CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHh-CCCeEEeec
Confidence 466666666665 444 457788889999999999999999999999988765 34455555 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
++ ++.+|++++++.+++ .++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+ ++.. .
T Consensus 106 ~~--~~~~~~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~~~li~D~~~~---~g~~--~- 169 (356)
T cd06451 106 PW--GEAVSPEEIAEALEQ-----HDIKAVTLTHNETSTGVLNP---LEGIGALAKKHDALLIVDAVSS---LGGE--P- 169 (356)
T ss_pred CC--CCCCCHHHHHHHHhc-----cCCCEEEEeccCCCcccccC---HHHHHHHHHhcCCEEEEeeehh---ccCc--c-
Confidence 64 467899999998864 26789999999999999987 5567778889999999999886 4332 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH----hcc---------------cC-
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK----MSS---------------FG- 303 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~----~~~---------------~~- 303 (464)
.++... +..+++.|++|+++.+ .++||++.+++ +.+.+.. ... +.
T Consensus 170 ~~~~~~-------------~~d~~~~s~~K~l~~p-~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (356)
T cd06451 170 FRMDEW-------------GVDVAYTGSQKALGAP-PGLGPIAFSER-ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYP 234 (356)
T ss_pred cccccc-------------CccEEEecCchhccCC-CCcceeEECHH-HHHHHHhcCCCCceeecHHHHHhhhcccCCCC
Confidence 121111 2335677999999844 46899999654 3333332 000 11
Q ss_pred -CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC---CccEEEEEecCcccccCChhHHHH
Q 037587 304 -LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS---NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 304 -~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+.+...+.++.++++.-. ...++...+..+++++++.+.|.+.|+++..+ .++.++|+.++.... ..+
T Consensus 235 ~t~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 306 (356)
T cd06451 235 HTPPVNLLYALREALDLIL--EEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVD------GDE 306 (356)
T ss_pred CCChHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCC------HHH
Confidence 122333344444443211 22345566777788889999999888877642 245566777764321 224
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
++..|.+++||.+++|..+. .++++|++++. .+++++++++++|+++++
T Consensus 307 ~~~~L~~~~gI~~~~g~~~~--~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 307 VVRRLMKRYNIEIAGGLGPT--AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred HHHHHHHhCCEEEecccccc--cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 66666544499999987542 35699999976 589999999999998763
No 134
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=8.5e-26 Score=227.48 Aligned_cols=336 Identities=15% Similarity=0.186 Sum_probs=223.6
Q ss_pred CCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccc--cCC----CCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 35 PSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELA--LFQ----DYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
..+++-|+.+....+++.+.+++.+..... ..... .+. ......++|+.++++++ ++
T Consensus 16 ~~~~~yld~~~~~~~p~~v~~a~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~--------~~ 78 (403)
T TIGR01979 16 GKPLVYLDSAATSQKPQQVIDAVAEYYRNS---------NANVHRGIHTLSVRATEAYEAVREKVAKFIN--------AA 78 (403)
T ss_pred CCceEEEeCccccCCCHHHHHHHHHHHHhC---------CCCCCCCccHHHHHHHHHHHHHHHHHHHHhC--------cC
Confidence 345677887765555555666665432110 00000 000 01234688899999886 45
Q ss_pred -CCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCChh----hhcccCCCcEEEEEecCCCCCcccCHHHHHHH
Q 037587 109 -PNKLVLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPGFD----RDLKWRPGVEIVPIHCSSSNGFRITISALENA 179 (464)
Q Consensus 109 -~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 179 (464)
+++|++|+|+++++.+++.++ +++||.|+++++.|+... ..+... |++++.++.++ ++.++++.+++.
T Consensus 79 ~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~-g~~~~~v~~~~--~~~~~~~~l~~~ 155 (403)
T TIGR01979 79 SDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERT-GATLKFIPLDD--DGTLDLDDLEKL 155 (403)
T ss_pred CCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhc-CcEEEEEecCC--CCCCCHHHHHHH
Confidence 679999999999999998875 578999999999887532 334444 99999999873 456899999998
Q ss_pred HHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCC
Q 037587 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259 (464)
Q Consensus 180 i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (464)
+.+ ++++|++++|+||||..++ +++|.++|+++|+++|+|++|+. ... + .++.
T Consensus 156 i~~------~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~---g~~--~-~~~~------------ 208 (403)
T TIGR01979 156 LTE------KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAV---PHM--P-VDVQ------------ 208 (403)
T ss_pred hcc------CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhc---Ccc--c-cCcc------------
Confidence 865 7899999999999999987 56788888899999999999973 211 1 1211
Q ss_pred CCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc-----------------------ccCCCChHHHHHHHHH
Q 037587 260 DLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS-----------------------SFGLVSSQTQYLLSRM 316 (464)
Q Consensus 260 ~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-----------------------~~~~~s~~~q~~~~~~ 316 (464)
..+..+++.|++|.+|.+| +|+++++++ +.+.+.... ..++.+.....++..+
T Consensus 209 -~~~~d~~~~s~~K~~gp~G--~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~a 284 (403)
T TIGR01979 209 -ALDCDFYVFSGHKMYGPTG--IGVLYGKEE-LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAA 284 (403)
T ss_pred -ccCCCEEEEecccccCCCC--ceEEEEchH-HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHH
Confidence 1145688899999998667 899988544 333221110 0012333444444444
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-----ccEEEEEecCcccccCChhHHHHHHHHHHHhcCe
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN-----AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-----~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI 390 (464)
++.-. ....+..+++..+.++.+.+.|+++ |+++..+. ++ ++.+.++.. . ..++. ..|+++||
T Consensus 285 l~~~~--~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~-~v~~~~~~~-~------~~~~~-~~L~~~gI 353 (403)
T TIGR01979 285 IDYLE--AIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGG-IISFNVEGV-H------PHDVG-TILDEEGI 353 (403)
T ss_pred HHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCc-eEEEEeCCc-C------HHHHH-HHHhhCCE
Confidence 43211 1113455666777778888888877 78887543 45 555666531 1 12344 45578899
Q ss_pred EEeCCCCCC------CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 391 NISPGSSCH------CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 391 ~v~pg~~f~------~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+++|..+. ...++++|||++. .++++++.+++.|+++++..
T Consensus 354 ~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 354 AVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 999876332 1135789999986 68999999999999877643
No 135
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=9.5e-27 Score=232.59 Aligned_cols=299 Identities=15% Similarity=0.204 Sum_probs=210.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCCCChhh---hcccCCCcEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----DPGDAFLLPTPYYPGFDR---DLKWRPGVEI 158 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~ 158 (464)
..++|+.+|++++ +++++|++|+|+++++..++.+++ ++|+.|++..+.|+.+.. .++.. |+++
T Consensus 45 ~~~~r~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~-g~~v 115 (381)
T PRK02948 45 LQVCRKTFAEMIG--------GEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQ-GYTV 115 (381)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhC-CCEE
Confidence 3566777777765 578899999999999999988875 578999998866655433 34555 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
+.++++. ++.+|++.+++.+.+ ++++|++++|+||||.++| +++|.++|+++|+++|+|+++. |+.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~---~g~ 181 (381)
T PRK02948 116 TEIPVDK--SGLIRLVDLERAITP------DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDCVQT---FGK 181 (381)
T ss_pred EEEeeCC--CCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEChhh---ccc
Confidence 9999863 457899999988754 6789999999999999976 5578888889999999997665 443
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH------HhcccCCCChHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT------KMSSFGLVSSQTQYL 312 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~------~~~~~~~~s~~~q~~ 312 (464)
. + ..+ . ..+..+++.|+||.+|.+| +|+++.+++....... ....+++.+.+.+.+
T Consensus 182 ~--~-~~~----~---------~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a 243 (381)
T PRK02948 182 L--P-IDV----F---------EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAA 243 (381)
T ss_pred c--c-cCc----c---------cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHH
Confidence 2 1 111 1 2256678899999999888 7998875442100010 001245677788888
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeE
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN-AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~ 391 (464)
+..+++.. .+++++.++.+++.++++.+.|+++|+++.+.. .+ +....+... ...... ..++...| .++||.
T Consensus 244 ~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~-~~~~~i~~~-~~~~~~-~~~~~~~l-~~~gI~ 316 (381)
T PRK02948 244 FLTAAENI---LKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHST-SCLPHIIGV-TIKGIE-GQYTMLEC-NRRGIA 316 (381)
T ss_pred HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCc-cCcCCEEEE-EeCCCC-HHHHHHhc-ccCCEE
Confidence 88887642 345677788899999999999999887665432 22 221111000 000111 12345554 678999
Q ss_pred EeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 392 ISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 392 v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
|++|..+... ..+++|||++. .++++++.+++.|++++++.
T Consensus 317 v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 317 ISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred EEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9988753210 14689999987 68999999999999987654
No 136
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=2.3e-25 Score=220.04 Aligned_cols=294 Identities=17% Similarity=0.145 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS 166 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~ 166 (464)
.++++.++++++ . ++ .++++++++++..++.+++++||.|+++.|+|+.+...+... |++++.++.
T Consensus 49 ~~l~~~la~~~~--------~-~~-~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~--- 114 (349)
T cd06454 49 EELEEELAEFHG--------K-EA-ALVFSSGYAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLS-GAKKRIFKH--- 114 (349)
T ss_pred HHHHHHHHHHhC--------C-CC-EEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHc-CCceEEecC---
Confidence 556666666553 2 23 455555577888888888999999999999999887777766 999887752
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccch
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISI 246 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~ 246 (464)
+|++.+++.+++.. ...+++++++++|+||||...+ +++|+++|+++|+++|+|++|+...+... . ...
T Consensus 115 ----~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~--~-~~~ 183 (349)
T cd06454 115 ----NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPH--G-RGV 183 (349)
T ss_pred ----CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCC--C-CCh
Confidence 46788888876532 1235778888899999999865 67788899999999999999974323211 0 111
Q ss_pred hhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-ccc---CCCChHHHHHHHHHcCCchh
Q 037587 247 MEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSF---GLVSSQTQYLLSRMLSDKKF 322 (464)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~ 322 (464)
. .... +..+.+++++|+||.+|.+| ||++++++ +.+.+... ..+ ...++..+.++...++...
T Consensus 184 ~-~~~~-------~~~~~~i~~~s~sK~~~~~g---G~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~- 250 (349)
T cd06454 184 E-EFGG-------LTDDVDIIMGTLGKAFGAVG---GYIAGSKE-LIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQ- 250 (349)
T ss_pred h-hhcc-------ccccCcEEEeechhhhcccC---CEEECCHH-HHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHh-
Confidence 0 1110 12367889999999998655 99988544 43333332 222 2345555556666554321
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CC
Q 037587 323 TCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CN 401 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~ 401 (464)
+ ....++++.++++.+.+.|.++|+.+..+.++++.++.++.. ....++...|++ +||.+.++.... ..
T Consensus 251 --~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~L~~-~gI~~~~~~~~~~~~ 320 (349)
T cd06454 251 --G-GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDP------AKAVAFSDALLE-RGIYVQAIRYPTVPR 320 (349)
T ss_pred --c-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCCh------HHHHHHHHHHHh-CCceEEEecCCccCC
Confidence 1 345677888888999999998888777665665555544321 123357777764 599998864221 11
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 402 EPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 402 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
..+++||+++. .+++++++++++|+++
T Consensus 321 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 321 GTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 24689999986 6899999999999764
No 137
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=1.5e-25 Score=226.83 Aligned_cols=339 Identities=14% Similarity=0.149 Sum_probs=224.1
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhccccccccccc---CCC---CCCcHHHHHHHHHHHHHHcCCCCCCC-
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELAL---FQD---YHGFPDAKKELVKLMARIRGNKVKFD- 108 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~- 108 (464)
.++|-|+.+....+++.+.+++.+.... . ...... |.. .....++|++++++++ ++
T Consensus 31 ~~~iyLd~a~~~~~p~~v~~a~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~ 93 (424)
T PLN02855 31 SKLVYLDNAATSQKPAAVLDALQDYYEE--Y-------NSNVHRGIHALSAKATDAYELARKKVAAFIN--------AST 93 (424)
T ss_pred CCeEEeeCccccCCCHHHHHHHHHHHHh--c-------CCCCCCccchHHHHHHHHHHHHHHHHHHHcC--------CCC
Confidence 3568888765555555566666553211 0 000001 110 1124688899999886 43
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCCh----hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPGF----DRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
+++|++|+|+++++..++.++ +++||+|+++.+.|+.. ...++.. |++++.++++++ ..+|++.+++.+
T Consensus 94 ~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~-g~~v~~v~~~~~--~~~~~~~l~~~i 170 (424)
T PLN02855 94 SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKT-GAVLKFVGLTPD--EVLDVEQLKELL 170 (424)
T ss_pred CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHc-CCEEEEEecCCC--CCcCHHHHHHHh
Confidence 579999999999999998763 57899999999988653 3334445 999999998643 348899999988
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
.+ ++++|++++|+||||.++|. ++|+++|+++|+++|+|++|+ .+.. + .++..
T Consensus 171 ~~------~t~lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~---~g~~--~-~~~~~------------ 223 (424)
T PLN02855 171 SE------KTKLVATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQS---VPHM--P-VDVQT------------ 223 (424)
T ss_pred cc------CceEEEEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhh---cCCc--C-CCchh------------
Confidence 64 78999999999999999984 567888889999999999996 3222 1 12111
Q ss_pred CCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----------------------cccCCCChHHHHHHHHHc
Q 037587 261 LWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----------------------SSFGLVSSQTQYLLSRML 317 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----------------------~~~~~~s~~~q~~~~~~l 317 (464)
.+..+++.|++|.+|.+| +||++++++.+ +.+... ...++.+.....++..++
T Consensus 224 -~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al 299 (424)
T PLN02855 224 -LGADFLVASSHKMCGPTG--IGFLWGKSDLL-ESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAI 299 (424)
T ss_pred -cCCCEEEeecccccCCCc--cEEEEEchhhh-hcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHH
Confidence 134577999999888556 89999865433 222111 001122223333444444
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC------ccEEEEEecCcccccCChhHHHHHHHHHHHhcCe
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN------AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~------~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI 390 (464)
+.-. +..+++.+++..+.++++.+.|.++ |++++.+. .+.++.+.++.. . ..++...|.+++||
T Consensus 300 ~~~~--~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~-~------~~~v~~~L~~~~gI 370 (424)
T PLN02855 300 DYLS--EIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI-H------PTDLSTFLDQQHGV 370 (424)
T ss_pred HHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc-C------HHHHHHHhcccCCE
Confidence 3111 2235566677777788888888877 77777432 123666666531 1 12455665444599
Q ss_pred EEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 391 NISPGSSCHC------NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 391 ~v~pg~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.++.|..+.. ..++++|||++. .++++++.+++.|+++++..+.
T Consensus 371 ~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 371 AIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred EEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9998875431 124689999987 7899999999999999877543
No 138
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=3.5e-25 Score=222.36 Aligned_cols=225 Identities=20% Similarity=0.272 Sum_probs=169.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----cc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~ 152 (464)
..+|+.+. ...|++.||++.+ .+++++++|+++++..++.+++++||.|+++.|+|+.+...+ ..
T Consensus 77 y~R~~~Pt-~~~Le~~lA~leg----------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~ 145 (427)
T PRK07049 77 YSRFNHPN-SEIVEDRLAVYEG----------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRN 145 (427)
T ss_pred ccCCCCcC-HHHHHHHHHHHhC----------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHh
Confidence 35677654 4899999999874 346888888889999999999999999999999999987653 34
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh---CCeEEEEec
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS---KRIHIVSDE 229 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~---~~~~lI~De 229 (464)
. |++++.++.. .|++.+++.+.+... .+++++|++++|+||||.+++.+++.++++.|.. +++++|+||
T Consensus 146 ~-Gi~~v~~~~~------~d~~~l~~~l~~~~~-~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDe 217 (427)
T PRK07049 146 F-GVGAVGFADG------LSEAAIGAAAEAAAA-KGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDN 217 (427)
T ss_pred c-CcEEEEEeCC------CCHHHHHHHHHhhcc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEEC
Confidence 4 8887777621 467788777754211 1378999999999999999999999999998654 689999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcccC--CCC
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSFG--LVS 306 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s 306 (464)
+|....+. . ++ .. +..++++||||.+| ++|+|+||+++++ .+.+.+......+ .++
T Consensus 218 ty~~~~~~-~-----pl-~~-------------g~divv~S~SK~~gG~~glr~G~vv~~~-~l~~~l~~~~~~~g~~ls 276 (427)
T PRK07049 218 TLLGPVFQ-K-----PL-EH-------------GADLSVYSLTKYVGGHSDLVAGAVLGRK-ALIRQVRALRSAIGTQLD 276 (427)
T ss_pred CccccccC-C-----cc-cc-------------CCCEEEEcCceeecCCCCcEEEEEECCH-HHHHHHHHHHHhcCCCCC
Confidence 98753221 1 11 11 45688899999998 6999999999854 4555555444332 367
Q ss_pred hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 307 SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 307 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
++.|.++...++. +..+.++..+++..+.+.|+++
T Consensus 277 ~~~a~l~~r~L~t-------l~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 277 PHSCWMLGRSLET-------LVLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHHHHHHcCCCh-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 7888887777753 3334455577888999999987
No 139
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.95 E-value=2.4e-25 Score=224.28 Aligned_cols=344 Identities=15% Similarity=0.117 Sum_probs=216.8
Q ss_pred CceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..+++|+.|.. .+ ++|.+.+++.+..... +...-.....|.+.....+|++.+|++++ .++.++
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~-----~~~~~~s~~~~g~~~~~~~l~~~la~~~g---------~~~~~~ 111 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRC-----GAGAGGTRNISGTNHYHVELERELADLHG---------KEAALV 111 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHc-----CCCCCCcCcCccCHHHHHHHHHHHHHHhC---------CCcEEE
Confidence 45788887622 12 2456666665532210 00000001123223335678888888764 245566
Q ss_pred EeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 114 LTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
+++| ++++..++..++. +++.|+.....|......+... |+++..++. .|++.+++.++.. ..++++
T Consensus 112 ~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~-~~~~~~~~~-------~d~~~le~~l~~~--~~~~~~ 180 (407)
T PRK09064 112 FTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRS-RCEKHIFRH-------NDVAHLEELLAAA--DPDRPK 180 (407)
T ss_pred ECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHc-CCcEEEECC-------CCHHHHHHHHHhc--cCCCCe
Confidence 6665 4566666666554 7777777766665554555544 777655542 3678888877532 113678
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++|+||+|.+.+ +++|.++|+++|+++|+||+|....|+..+ ..+..... + ..+.+++++||
T Consensus 181 ~v~~~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g---~g~~~~~~-~-------~~~~div~~t~ 246 (407)
T PRK09064 181 LIAFESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRG---GGIAERDG-L-------MDRIDIIEGTL 246 (407)
T ss_pred EEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCC---CChHHhcC-C-------CCCCeEEEEec
Confidence 9999999999999876 777888888999999999999743354331 12211111 0 12347889999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhc-ccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMS-SFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV 347 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (464)
||+||++| ||++++ +.+.+.+.... .+. ..++..+.++.+.++.. ++ ....++.+.++++++.+.|++
T Consensus 247 sKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~---~~-~~~~~~~~~~~~~~l~~~L~~ 318 (407)
T PRK09064 247 AKAFGVMG---GYIAGS-AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHL---KE-SNEERERHQERAAKLKAALDA 318 (407)
T ss_pred chhhhccC---ceEecC-HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHH
Confidence 99999888 999985 44555444432 221 23444555555544321 21 233456778888999999999
Q ss_pred CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 348 ~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
.|+++.++.++ |+++.++.. ....++...+++++||.|++...+.. .+.+++||+++. .++++++++++.|
T Consensus 319 ~g~~~~~~~~~-iv~i~~~~~------~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l 391 (407)
T PRK09064 319 AGIPVMPNESH-IVPVMVGDP------EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEAL 391 (407)
T ss_pred cCCCCCCCCCC-EEEEEeCCH------HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 99888776665 666766421 12335777777677999998654322 134689999976 6899999999999
Q ss_pred HHHHHhhC
Q 037587 426 KVFAQSCN 433 (464)
Q Consensus 426 ~~~l~~~~ 433 (464)
++++++..
T Consensus 392 ~~~~~~~~ 399 (407)
T PRK09064 392 VEVWARLG 399 (407)
T ss_pred HHHHHHcC
Confidence 99987654
No 140
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=225.91 Aligned_cols=338 Identities=14% Similarity=0.110 Sum_probs=218.4
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||..+ .+.+. .|.+.+++.+..... + .....|++..+ .+|.+.+++++ +
T Consensus 36 ~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~-----~----~~~~~~~~~~~-~~la~~l~~~~----~-- 99 (398)
T PRK03244 36 VVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATL-----G----HVSNLFATEPQ-IALAERLVELL----G-- 99 (398)
T ss_pred EEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc-----c----CccCccCCHHH-HHHHHHHHHhC----C--
Confidence 4334456778999875 34443 366666666542210 0 01124654332 45555555543 2
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCc------------EEEEEecCCCCCccc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCSSSNGFRI 171 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~~~~~~~~ 171 (464)
. ..++++++++|+++++..+++.+..+| +.|+..+++|+++........|. ++..+|. .
T Consensus 100 ~-~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 171 (398)
T PRK03244 100 A-PEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------G 171 (398)
T ss_pred C-CCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------C
Confidence 1 135799999999999999999766666 56777788998774333222122 1222221 2
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH-HHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhh
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE-LNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAV 250 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~-l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~ 250 (464)
|++.+++.+.+ ++++|++..++||+|.+++.++ +++|.++|+++|+++|+||+|.++...+. .+ . ...
T Consensus 172 d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~--~~-~-~~~- 240 (398)
T PRK03244 172 DVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA--WF-A-HQH- 240 (398)
T ss_pred CHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch--HH-h-hhh-
Confidence 68888887743 7888999888999999997765 99999999999999999999987433222 11 1 111
Q ss_pred hccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHHHH
Q 037587 251 MDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNYMK 328 (464)
Q Consensus 251 ~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 328 (464)
.+ ..++ +.||||++| +|+|+||++++++ +.+.+.. ....+..+++.+.++.++|+.-. -.
T Consensus 241 ~~--------~~pD---i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-----~~ 302 (398)
T PRK03244 241 DG--------VTPD---VVTLAKGLG-GGLPIGACLAFGP-AADLLTPGLHGSTFGGNPVACAAALAVLDTIA-----SE 302 (398)
T ss_pred hC--------CCCC---EEEEchhhh-CCcccEEEEEcHH-HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHH-----hc
Confidence 11 1122 238899999 9999999999554 5554433 22234577888888888865211 01
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCee--ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 037587 329 ENRKRLRKRKEMLVSGLKVAGIRC--LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWF 406 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~~g~~~--~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 406 (464)
+..+.++++.+++.+.|++++.++ .....|+++|+.++.. ...++...++ ++||++.+.. .+++
T Consensus 303 ~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~-------~~~~~~~~l~-~~Gv~~~~~~------~~~i 368 (398)
T PRK03244 303 GLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAP-------VAKAVEAAAR-EAGFLVNAVA------PDVI 368 (398)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEecc-------HHHHHHHHHH-HCCeEEeecC------CCEE
Confidence 223444555666777887754421 1123568999998631 1234666665 6799998742 4689
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 407 RICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 407 Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|++++. .+++++++++++|++++++.+
T Consensus 369 R~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 369 RLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 999877 789999999999999987653
No 141
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=3.1e-25 Score=223.36 Aligned_cols=292 Identities=14% Similarity=0.183 Sum_probs=203.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeCChHHHHHHHHHH----hcCCCCeEEEcCCCCCCh----hhhcccCCCc
Q 037587 86 FPDAKKELVKLMARIRGNKVKF-DPNKLVLTAGSTAANETLMFC----LADPGDAFLLPTPYYPGF----DRDLKWRPGV 156 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G~~~al~~~~~~----l~~~gd~Vlv~~p~y~~~----~~~~~~~~g~ 156 (464)
..++|+++|++++ . ++++|++|+|+++++..++.+ ++++||.|+++++.|++. ...++.. |+
T Consensus 69 ~~~~r~~la~~~~--------~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~ 139 (406)
T PRK09295 69 MENVRKQAALFIN--------ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARV-GA 139 (406)
T ss_pred HHHHHHHHHHHcC--------cCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHc-Cc
Confidence 4578888888876 3 578999999999999999886 468899999999988643 3334445 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+++.++++. ++.+|++++++.+.+ ++++|++++|+||||.++| +++|+++|+++|+++|+|++|+.
T Consensus 140 ~v~~v~~~~--~~~~d~~~l~~~i~~------~t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~--- 205 (406)
T PRK09295 140 ELRVIPLNP--DGTLQLETLPALFDE------RTRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAV--- 205 (406)
T ss_pred EEEEEecCC--CCCCCHHHHHHhcCC------CcEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEccccc---
Confidence 999999864 456899999988754 7899999999999999987 56688888899999999999973
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM----------------- 299 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~----------------- 299 (464)
... + .++.. .+..+++.|++|.+|.+| +||++.+++.+ +.+...
T Consensus 206 g~~--~-~~~~~-------------~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~ 266 (406)
T PRK09295 206 MHH--P-VDVQA-------------LDCDFYVFSGHKLYGPTG--IGILYVKEALL-QEMPPWEGGGSMIATVSLTEGTT 266 (406)
T ss_pred Ccc--c-cCchh-------------cCCCEEEeehhhccCCCC--cEEEEEchHhH-hhCCCcccCCceeeeeecCCccc
Confidence 222 1 12211 144578899999988666 79999865432 222100
Q ss_pred -------cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC--ccEEEEEecCccc
Q 037587 300 -------SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN--AGLFCWVDMRHLL 369 (464)
Q Consensus 300 -------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~--~g~f~~~~l~~~~ 369 (464)
...++.+.....++.++++.-. +.-++..+++.++..+++.+.|.+. |+++..+. .+ .+.+.++..
T Consensus 267 ~~~~~~r~e~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~-iv~~~~~~~- 342 (406)
T PRK09295 267 WAKAPWRFEAGTPNTGGIIGLGAALDYVS--ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLG-VIAFNLGKH- 342 (406)
T ss_pred cCCchhhcCCCCccHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCce-EEEEEECCc-
Confidence 0012344444455555543211 1123445566777778888888777 67776542 44 444555431
Q ss_pred ccCChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 370 VSNTFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 370 ~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
. ..++.. .|+++||.|+.|..+.. ..++++|+|++. .++++++.++++|+++..
T Consensus 343 -----~-~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 343 -----H-AYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred -----C-HHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1 123444 45788999998875542 124689999987 789999999999988643
No 142
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.95 E-value=3.3e-25 Score=219.38 Aligned_cols=294 Identities=19% Similarity=0.224 Sum_probs=205.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCC--cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCC-hhhhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPN--KLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPG-FDRDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~-~~~~~~~~~g~~~~~v 161 (464)
..++|+.++++++ ++++ .|++++|+++++..++.+++.+||++++..+. |+. +...+... |.+++.+
T Consensus 33 ~~~~~~~la~~~~--------~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~~~~~a~~~-g~~~~~i 103 (355)
T TIGR03301 33 TDQVRDRLLALAG--------GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYL-GIPHTDL 103 (355)
T ss_pred HHHHHHHHHHHhc--------CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhHHHHHHHHc-CCceEEE
Confidence 4677788888776 4443 57889999999999999998888887766655 443 33445555 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+. ++.+|++++++.+++ +++++++++++++||||...+ +++|+++|+++++++|+|++++ ++..
T Consensus 104 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~~livD~~~s---~g~~-- 169 (355)
T TIGR03301 104 NFSE--YEPPDLNRIEEALAA----DPDITHVATVHHETTTGILNP---LEAIAKVARSHGAVLIVDAMSS---FGAI-- 169 (355)
T ss_pred ecCC--CCCCCHHHHHHHHHh----CCCceEEEEEecCCcccchhH---HHHHHHHHHHcCCEEEEEeccc---cCCc--
Confidence 8753 467899999998864 236677888999999999875 6788899999999999998776 4332
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHh-------------------cc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKM-------------------SS 301 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~-------------------~~ 301 (464)
+ .++.. .+..+++.|++|.+ |++| +||++++++.+ +.+... ..
T Consensus 170 ~-~~~~~-------------~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (355)
T TIGR03301 170 P-IDIEE-------------LDVDALIASANKCLEGVPG--FGFVIARRDLL-EASAGNARSLYLDLYDQWAYMEKTGKW 232 (355)
T ss_pred c-cchhh-------------cCccEEEecCCcccccCCc--eeEEEECHHHH-HHhhCCCCCceeeHHHHHHHhhhcCCC
Confidence 1 22211 14567889999987 5556 69999965543 333210 01
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC---CccEEEEEecCcccccCChhHHH
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS---NAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
.++.+...+.++..++..-.. ..++++.+++++++++++.+.|+++|+++..+ .+++++|+.++.... ....
T Consensus 233 ~~t~~~~~~~a~~~al~~~~~-~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 307 (355)
T TIGR03301 233 RFTPPTHTVYAFAQALEELEA-EGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPD----FDFD 307 (355)
T ss_pred CCCCcHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCc----chHH
Confidence 224565666665555542110 11256667778888999999999888875533 345678888874211 1122
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
++...+ .++||.+.+|..+. .+++||++.. .++++++.+++.|+++
T Consensus 308 ~~~~~l-~~~gi~i~~~~~~~---~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 308 DFYQEL-KERGFVIYPGKLTL---ADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHHHHH-HHCCEEEECCcccc---ccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 455555 57799999987553 3789999843 7899999999999875
No 143
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=5.4e-25 Score=221.21 Aligned_cols=329 Identities=14% Similarity=0.148 Sum_probs=213.0
Q ss_pred eEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCC----cHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 38 IIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHG----FPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 38 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.+-|+.+....+++.+.+++.+.... .. ......|+...+ ..++|+.++++++ +++++|+
T Consensus 18 ~~yl~~~~~~~~p~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~l~~~ia~~~~--------~~~~~v~ 81 (397)
T TIGR01976 18 RVFFDNPAGTQIPQSVADAVSAALTR-----SN---ANRGGAYESSRRADQVVDDAREAVADLLN--------ADPPEVV 81 (397)
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHh-----cC---CCCCCCchHHHHHHHHHHHHHHHHHHHcC--------CCCCeEE
Confidence 57777665555555566665543211 00 011123443333 3477777777765 5566899
Q ss_pred EeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChh----hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 114 LTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFD----RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 114 it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+++|+++++..++.++ +++||+|++++|.|.... ..++.. |++++.++++++ ++.++++.+++.+.+
T Consensus 82 ~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~~l~~~i~~---- 155 (397)
T TIGR01976 82 FGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERA-GAKVKWARVDEA-TGELHPDDLASLLSP---- 155 (397)
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhc-CCEEEEEecccc-CCCcCHHHHHHhcCC----
Confidence 9999999998887775 679999999999986643 334445 999999988743 467899999998854
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+|+++.. + . ....+.. .+..+
T Consensus 156 --~~~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~---~-~--~~~~~~~-------------~~~d~ 211 (397)
T TIGR01976 156 --RTRLVAVTAASNTLGSIVD---LAAITELVHAAGALVVVDAVHYA---P-H--GLIDVQA-------------TGADF 211 (397)
T ss_pred --CceEEEEeCCCCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc---c-c--cCCCHHH-------------cCCCE
Confidence 7899999999999999975 77788888899999999999852 2 1 1112211 13456
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc------------CCCChHH---HHHHHHHcCCch---------h
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF------------GLVSSQT---QYLLSRMLSDKK---------F 322 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~------------~~~s~~~---q~~~~~~l~~~~---------~ 322 (464)
++.|++|.+| .|+||++++++ +.+.+...... ++.+... ..++..++.+.. .
T Consensus 212 ~~~s~~K~~g---~~~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 287 (397)
T TIGR01976 212 LTCSAYKFFG---PHMGILWGRPE-LLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRER 287 (397)
T ss_pred EEEechhhcC---CceEEEEEcHH-HHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence 6789999885 36899998554 43333221111 1112222 222233332211 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecC-----CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 323 TCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKS-----NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~-----~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+...+++.+++..+..+++.+.|++++ +++..+ .++ ++.+.++.. . ..++..+| .++||.|+.|.
T Consensus 288 ~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~------~~~l~~~L-~~~gI~v~~~~ 358 (397)
T TIGR01976 288 LVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVP-TVSFTVHGL-P------PQRVVRRL-ADQGIDAWAGH 358 (397)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCc-eEEEEeCCc-C------HHHHHHHH-HHCCeEEEeCc
Confidence 011245566777778888888888874 877654 455 666665421 1 12466665 57799999886
Q ss_pred CCCC---------CCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 397 SCHC---------NEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 397 ~f~~---------~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
.|.. ...+++|||++. .++++++.++++|
T Consensus 359 ~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 359 FYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred cchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 6541 134689999976 6899999998764
No 144
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=2.4e-24 Score=216.90 Aligned_cols=294 Identities=16% Similarity=0.162 Sum_probs=199.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+|.+.+|++++ . +.+++++|+++++..++.+++.+||.|++..+.|......+... |++++.++.
T Consensus 101 ~~~le~~la~~~g--------~--~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~-- 167 (407)
T PRK07179 101 KPQFEKKLAAFTG--------F--ESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAA-GAQAHPFRH-- 167 (407)
T ss_pred HHHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHC-CCeEEEecC--
Confidence 4678888888874 2 45688999999999999999999999999999888777666655 888766542
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
.|++.+++.+++. ++++|++++|+||||.+.| +++|.++|+++|+++|+||+|....++.. . ..
T Consensus 168 -----~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~--g-~g 231 (407)
T PRK07179 168 -----NDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQ--G-AG 231 (407)
T ss_pred -----CCHHHHHHHHHhc-----CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCC--C-Cc
Confidence 4789999988641 4678888899999999988 56788888899999999999974333222 1 11
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc---cCC-CChHHHHHHHHHcCCch
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS---FGL-VSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~---~~~-~s~~~q~~~~~~l~~~~ 321 (464)
...... . .....+++.|+||++| + |+||+++++ .+.+.+..... +.. .++....++.++++..
T Consensus 232 ~~~~~~-~-------~~~vdi~~~S~sK~~g-~--~~G~l~~~~-~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~- 298 (407)
T PRK07179 232 LVAELG-L-------TSRVHFITASLAKAFA-G--RAGIITCPR-ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI- 298 (407)
T ss_pred hHHhcC-C-------CCCCCEEEeechHhhh-c--cCeEEEeCH-HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-
Confidence 111111 0 1123578899999996 2 699999854 45454443322 221 2222222233333321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC-CCCC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS-SCHC 400 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~-~f~~ 400 (464)
+...+.+++++++++++.+.|.++|+++. +.+ .++++.++.. .....+... |.++||.+..-. ....
T Consensus 299 ---~~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~~~-~i~~l~~~~~------~~~~~~~~~-L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 299 ---ESADDRRARLHANARFLREGLSELGYNIR-SES-QIIALETGSE------RNTEVLRDA-LEERNVFGAVFCAPATP 366 (407)
T ss_pred ---hcCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCC-CEEEEEeCCH------HHHHHHHHH-HHHCCceEeeecCCCCC
Confidence 11344667888899999999998888776 444 4777776531 112234444 467899854211 1111
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 401 NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 401 ~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
...+++||+++. .+++++++++++|++++++..
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 235789999987 799999999999999888754
No 145
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=1.5e-24 Score=218.14 Aligned_cols=299 Identities=14% Similarity=0.139 Sum_probs=200.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
..+|++.+|++++ .++ .++++++++++..++..+.. +|+.|+.....|......+... |+++..++.
T Consensus 92 ~~~Le~~la~~~g---------~~~-~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~-g~~~~~~~~ 160 (402)
T TIGR01821 92 HVELEAELADLHG---------KES-ALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHS-GAEKFIFRH 160 (402)
T ss_pred HHHHHHHHHHHhC---------CCe-EEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHc-CCeEEEECC
Confidence 4678888888774 233 45555558888888887765 6777777655665555555545 777665542
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.|++.+++.++.. ...++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....++..+
T Consensus 161 -------~d~~~l~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g--- 225 (402)
T TIGR01821 161 -------NDVAHLEKLLQSV--DPNRPKIIAFESVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRG--- 225 (402)
T ss_pred -------CCHHHHHHHHHhc--cCCCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCC---
Confidence 2677888777532 1125788999999999999987 677888899999999999999843343321
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-c---CCCChHHHHHHHHHcCC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-F---GLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~ 319 (464)
...... .+. ..+.+++++||||+||++| ||+++++ .+.+.+..... + ...++..+.++.++++.
T Consensus 226 ~g~~~~-~~~-------~~~~div~~t~sKa~g~~G---G~i~~~~-~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~ 293 (402)
T TIGR01821 226 GGIAER-DGL-------MHRIDIIEGTLAKAFGVVG---GYIAASR-KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRH 293 (402)
T ss_pred Cccchh-ccC-------CCCCeEEEEechhhhccCC---ceeecCH-HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHH
Confidence 111111 100 1134678899999999888 9998854 45555544322 2 12455667766666653
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
... ....++.+.++++++.+.|+++|+++.++.++ ++.+.++.. ....++...|++++||.+++.....
T Consensus 294 ~~~----~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~i~~~~~------~~a~~~~~~L~~~~Gi~v~~~~~p~ 362 (402)
T TIGR01821 294 LKE----SQDLRRAHQENVKRLKNLLEALGIPVIPNPSH-IVPVIIGDA------ALCKKVSDLLLNKHGIYVQPINYPT 362 (402)
T ss_pred hhc----CHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHHhcCCEEEEeECCCC
Confidence 221 13344556678888999999889888777776 566665421 1233577777767799998865332
Q ss_pred C-CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 400 C-NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 400 ~-~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. .+.+++||+++. .+++++++++++|++++++..
T Consensus 363 ~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 363 VPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 2 234689999966 689999999999999987653
No 146
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=1.4e-24 Score=217.43 Aligned_cols=342 Identities=18% Similarity=0.139 Sum_probs=216.1
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.+..+. ...++.. ...+....+++.+.+.
T Consensus 23 ~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~-------------~~~~~~~-~~~~~~~~la~~l~~~--- 85 (389)
T PRK01278 23 VWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEK-------------LWHVSNL-YRIPEQERLAERLVEN--- 85 (389)
T ss_pred CEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHh-------------cCccccc-cCChHHHHHHHHHHhh---
Confidence 34444556678998764 2333 346666666664221 1111111 1233445555555432
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHh----cCCCC----eEEEcCCCCCChhhhcccCCCcEEEEEecCC-CCCcc----
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCL----ADPGD----AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS-SNGFR---- 170 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~-~~~~~---- 170 (464)
...+++++++|+++++..+++++ ..+|| +|++.+++|+++........+.....-...+ ..++.
T Consensus 86 ---~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (389)
T PRK01278 86 ---SFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPF 162 (389)
T ss_pred ---CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCC
Confidence 13468999999999999998876 45666 8999999999886555433232211100000 11222
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhh
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNPSNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA 249 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l 249 (464)
.|++.+++.+.+ ++++|++..++||+| .++|.+.+++|.++|++||+++|+||+|.++.+.+. .+ .. ..
T Consensus 163 ~d~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~--~~-~~-~~ 232 (389)
T PRK01278 163 GDIEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK--LF-AH-EW 232 (389)
T ss_pred CCHHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--ce-ee-cc
Confidence 478899888753 788888886688888 788999999999999999999999999997543332 11 10 11
Q ss_pred hhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCC---chhhH
Q 037587 250 VMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSD---KKFTC 324 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~---~~~~~ 324 (464)
. +. . +. +.||||.++ +|+|+||++++++ +.+.+.... ..++.+++.|.++.+.++. .++ .
T Consensus 233 ~-~~-------~-pd---i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~-~ 297 (389)
T PRK01278 233 A-GV-------T-PD---IMAVAKGIG-GGFPLGACLATEE-AAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGF-L 297 (389)
T ss_pred c-CC-------C-CC---EEEEehhcc-CCcceEEEEEcHH-HHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHH-H
Confidence 1 11 1 11 358999998 9999999999554 444443222 1224677888888666642 233 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCC
Q 037587 325 NYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPG 404 (464)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~ 404 (464)
++++++.+.++++.+.+.+.+.+. +....+ .|+++|++++. ...+++..+++ +||.+.|+. .+
T Consensus 298 ~~~~~~~~~l~~~l~~l~~~~~~~-~~~v~g-~G~~~~i~~~~--------~~~~~~~~l~~-~GV~~~p~~------~~ 360 (389)
T PRK01278 298 DNVQRMGLYLKQKLEGLVDRFPDV-IEEVRG-KGLLLGLKCVV--------PNRDLVQALRD-EGLLTVGAG------DN 360 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCc-eeeEec-ccEEEEEEEec--------CHHHHHHHHHH-CCeEEeecC------CC
Confidence 445555555555544443222111 222333 56788888752 12357777775 599999873 46
Q ss_pred eEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 405 WFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 405 ~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++||+++. .+++++++++++|++++++
T Consensus 361 ~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 361 VVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 89999765 6899999999999998865
No 147
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=2.6e-24 Score=213.62 Aligned_cols=295 Identities=13% Similarity=0.161 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP--NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~ 162 (464)
.++|+.++++++ +++ ++|++|+|+++++..++.++..+||.+++..+++.+. ...++.. |++++.++
T Consensus 38 ~~~r~~la~l~~--------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~-g~~~~~v~ 108 (363)
T TIGR02326 38 EQIRQQLLALAT--------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYL-GIPHHVVD 108 (363)
T ss_pred HHHHHHHHHHhC--------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEEe
Confidence 456777777765 444 4799999999999999999988999888877765444 2445555 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+++ +..+|++.+++.+++ .++++++++++++||||..+| +++|+++|+++|+++|+|++++ ++.. +
T Consensus 109 ~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~---~g~~--~ 174 (363)
T TIGR02326 109 TGE--VEPPDVVEVEAILAA----DPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS---FGGI--P 174 (363)
T ss_pred CCC--CCCCCHHHHHHHHhh----CCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc---ccCc--c
Confidence 763 456899999998864 235677889999999999987 5788999999999999998876 5433 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHhc-------------------cc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKMS-------------------SF 302 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~~-------------------~~ 302 (464)
.++..+ +..+++.|++|.+ |.+| +||++++++.+........ ..
T Consensus 175 -~~~~~~-------------~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (363)
T TIGR02326 175 -IDIAEL-------------HIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWR 238 (363)
T ss_pred -cchhhc-------------CccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCC
Confidence 232222 3457789999987 4455 7999996554432210000 11
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC---CccEEEEEecCcccccCChhHHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS---NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
++.+...+.++.++++.-.. ...+++.+++++++++++.+.|+++|+.+..+ .++...|+.++..... ...+
T Consensus 239 ft~~~~~~~al~~al~~l~~-~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 313 (363)
T TIGR02326 239 FTSPTHVVHAFAQALLELEK-EGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDY----RFAD 313 (363)
T ss_pred CCCcHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCC----CHHH
Confidence 23555666665555543110 11255677888999999999999888877543 3555677877642110 1123
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ecCCHHHHHHHHHHHHHHH
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICF-ANITEETLQVALQRIKVFA 429 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~~~~e~l~~~l~~l~~~l 429 (464)
+.+.| +++||.++||..+. .+++||++ +..+.++++.++++|++++
T Consensus 314 v~~~L-~~~gi~v~~g~~~~---~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 314 FYQRL-KEQGFVIYPGKVSQ---VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred HHHHH-HHCCEEEECCcCCC---CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 55555 57799999997652 46899996 5478999999999999875
No 148
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=1.1e-24 Score=217.29 Aligned_cols=288 Identities=16% Similarity=0.248 Sum_probs=198.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcC---CCCeEEEcCCCCCChh----hhcccCCCcE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFD-PNKLVLTAGSTAANETLMFCLAD---PGDAFLLPTPYYPGFD----RDLKWRPGVE 157 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~l~~---~gd~Vlv~~p~y~~~~----~~~~~~~g~~ 157 (464)
..++|+.++++++ ++ +++|++|+|+++++..++.++.. +||+|++++++|+... ..++.. |++
T Consensus 45 ~~~~~~~la~~~~--------~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~-g~~ 115 (373)
T cd06453 45 YEAAREKVARFIN--------APSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERT-GAK 115 (373)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhc-CcE
Confidence 4578888888875 45 78999999999999999999887 8999999999998742 233345 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
++.++.+ .++.+|++++++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++++|++|+..
T Consensus 116 ~~~v~~~--~~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~li~D~a~~~~--- 181 (373)
T cd06453 116 LKVVPVD--DDGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINP---VKEIGEIAHEAGVPVLVDGAQSAG--- 181 (373)
T ss_pred EEEeecC--CCCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCC---HHHHHHHHHHcCCEEEEEhhhhcC---
Confidence 9999986 3567899999998864 7899999999999999987 567888888999999999998732
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc----------------
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS---------------- 301 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~---------------- 301 (464)
.. + .++..+ +..+++.|++|.++. .++||++++++ +.+.+.....
T Consensus 182 ~~--~-~~~~~~-------------~~d~~~~s~~K~~~~--~g~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~ 242 (373)
T cd06453 182 HM--P-VDVQDL-------------GCDFLAFSGHKMLGP--TGIGVLYGKEE-LLEEMPPYGGGGEMIEEVSFEETTYA 242 (373)
T ss_pred ce--e-eecccc-------------CCCEEEeccccccCC--CCcEEEEEchH-HhhcCCCeecCCCccccccccccccC
Confidence 11 1 111111 334667899999974 56899998554 3333322110
Q ss_pred -----c--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC--ccEEEEEecCccccc
Q 037587 302 -----F--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN--AGLFCWVDMRHLLVS 371 (464)
Q Consensus 302 -----~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~--~g~f~~~~l~~~~~~ 371 (464)
+ .+++.....++..+++.-. +..+++.++..++.++++.+.|+++ ++++..+. .+.++++.++..
T Consensus 243 ~~~~~~~~~t~~~~~~~al~~al~~l~--~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (373)
T cd06453 243 DLPHKFEAGTPNIAGAIGLGAAIDYLE--KIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI--- 317 (373)
T ss_pred CCccccCCCCCCHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc---
Confidence 1 1233333333333332111 1124556666777888888999887 67776321 234666776531
Q ss_pred CChhHHHHHHHHHHHhcCeEEeCCCCCC------CCCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 372 NTFEAEKELWKKIIFEVGLNISPGSSCH------CNEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 372 ~~~~~~~~l~~~ll~~~gI~v~pg~~f~------~~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
...++.+.| .++||.+.+|..+. ...++++|++++. .++++++++++.|
T Consensus 318 ----~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 318 ----HPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ----CHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 112455555 56899998877543 1235789999987 6899999998764
No 149
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=7.4e-24 Score=210.75 Aligned_cols=299 Identities=16% Similarity=0.193 Sum_probs=203.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDP--NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v 161 (464)
..++|+.++++++ .++ +.|++++|+++++..++.++..+||.|++..++|.+.. ..++.. |++++.+
T Consensus 39 ~~~~~~~l~~l~~--------~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~-g~~~~~i 109 (368)
T PRK13479 39 TASVRAKLVAIAT--------GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYL-GIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHc-CCcEEEE
Confidence 4677777777765 333 56889999999999999999999999999988876542 445555 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+. ++.+|++++++.+++ .+++++|++++|+||||...| +++|.++|+++|+++|+|+++. |+..
T Consensus 110 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livDa~~~---~g~~-- 175 (368)
T PRK13479 110 DTGE--DEPPDAAEVEAALAA----DPRITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVDAMSS---FGAI-- 175 (368)
T ss_pred ECCC--CCCCCHHHHHHHHHh----CCCCcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEEcccc---cCCc--
Confidence 9863 456899999998864 235678899999999999987 5677888889999999996654 5433
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHhcc-------------------
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKMSS------------------- 301 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~~~------------------- 301 (464)
+ .++..+ +..+++.|++|.+ |.+| +||++++++.+ +.+.....
T Consensus 176 ~-~~~~~~-------------~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (368)
T PRK13479 176 P-IDIAEL-------------GIDALISSANKCIEGVPG--FGFVIARRSEL-EACKGNSRSLSLDLYDQWAYMEKTGQW 238 (368)
T ss_pred c-cccccc-------------CceEEEecCccccccCCC--ceEEEECHHHH-HHhhcCCCCeeecHHHHHhhhcccCCC
Confidence 1 222111 3346678999975 6677 69999965443 33322110
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ccEEEEEecCcccccCChhHHH
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN---AGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
.++.+...+.++..++..-.- ..++++..+++.++++.+.+.|+++|+.+..+. .+..+.+.++... .. +..
T Consensus 239 ~~t~~~~~~~~l~~al~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ 313 (368)
T PRK13479 239 RFTPPTHVVAAFYQALLELEE-EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADP---AY-DFK 313 (368)
T ss_pred CCCCcHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCC---Cc-CHH
Confidence 113444444444444432110 112456667888899999999999998765332 2222323333211 00 112
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ecCCHHHHHHHHHHHHHHHHhhC
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-ANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++...|. ++||.|++|..+ ..+++|+++ +..++++++.++++|++++++..
T Consensus 314 ~l~~~L~-~~gi~v~~g~~~---~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 314 EFYERLK-EQGFVIYPGKLT---QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred HHHHHHH-HCCEEEecCCCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4666664 679999988644 246899986 65789999999999999988654
No 150
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=1.3e-24 Score=215.11 Aligned_cols=295 Identities=15% Similarity=0.206 Sum_probs=198.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~ 152 (464)
..+|+.+ ...+|++++|++.+ .+ ..++++|+++++..++ .++.+||.|+++.|+|+.... .+..
T Consensus 46 y~r~~~p-t~~~le~~la~l~g--------~~--~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 113 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLEG--------GD--QGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKK 113 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC--------CC--cEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhc
Confidence 4556654 35789999999976 32 2467788889999876 577899999999999987433 3344
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++. .|++.+++++.+ ++++|++++|+||+|.. .++++|+++|+++|+++|+|++|.
T Consensus 114 ~-G~~v~~vd~-------~d~~~l~~~i~~------~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~ 176 (366)
T PRK08247 114 W-NVRFVYVNT-------ASLKAIEQAITP------NTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFY 176 (366)
T ss_pred c-CceEEEECC-------CCHHHHHHhccc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 5 999988874 278899888764 78999999999998654 789999999999999999999996
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHhccc--CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKMSSF--GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~ 309 (464)
...+ .. + + ..+..+++.|+||.++- ++++.|+++++++.+.+.+...... ..++++.
T Consensus 177 ~~~~-~~-----p---~-----------~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~ 236 (366)
T PRK08247 177 TPVL-QR-----P---L-----------EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFD 236 (366)
T ss_pred cccc-cC-----c---h-----------hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHH
Confidence 3211 11 1 1 11456899999999963 3579999998655565544433322 2356677
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-ecCCccEEEEEecCcccccCChhHHH---HHHHH
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-C-LKSNAGLFCWVDMRHLLVSNTFEAEK---ELWKK 383 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~g~f~~~~l~~~~~~~~~~~~~---~l~~~ 383 (464)
|.++...++. +..+.+..+++++.+.+.|+++ ++. | .|+.||+|.| .+........+.+.. .++..
T Consensus 237 a~l~~~~l~t-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~~~~~~~~~l~~~~~~~s 308 (366)
T PRK08247 237 SWLLIRGMKT-------LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEEWVNPFLKSLKLITFAES 308 (366)
T ss_pred HHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHHHHHHHHHcCCcceEccC
Confidence 7776665553 2334445688889999999987 665 3 4558898877 564200000000000 01111
Q ss_pred HHHhcCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 384 IIFEVGLNISPGSSCHCN-----------EPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~-----------~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.....+.+.|++.++.. .++.+|+|++. |+.+.+++-|.+++++
T Consensus 309 lg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 309 LGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred CCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 112335666787655431 14579999995 5567777777777765
No 151
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=2.7e-24 Score=214.92 Aligned_cols=306 Identities=15% Similarity=0.192 Sum_probs=212.3
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeCChHHHHHHHHHHhc-----CC-CCeEEEcCCCCCChhhh--
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKF-DPNKLVLTAGSTAANETLMFCLA-----DP-GDAFLLPTPYYPGFDRD-- 149 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G~~~al~~~~~~l~-----~~-gd~Vlv~~p~y~~~~~~-- 149 (464)
.|+. .+...+++++++++.. +.. ++++|++|+|+++++.+++.++. ++ ++.|++..+.|+.+...
T Consensus 35 ~~~~-~~~~~l~~a~~~~~~~-----~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~ 108 (382)
T TIGR03403 35 QFGT-ATHPAIAEALDKLYKG-----INARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA 108 (382)
T ss_pred HHHH-HHHHHHHHHHHHHHHH-----cCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH
Confidence 3443 3467899999888853 223 67899999999999999998762 45 46899988777655433
Q ss_pred -cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 150 -LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 150 -~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
++.. |++++.+++++ ++.+|++.+++.+.+ +++++++++|+||||.+++. ++|.++|+++|+++++|
T Consensus 109 ~~~~~-G~~v~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~---~~I~~la~~~g~~~ivD 176 (382)
T TIGR03403 109 FLESL-GVEVTYLPINE--QGTITAEQVREAITE------KTALVSVMWANNETGMIFPI---KEIGEICKERGVLFHTD 176 (382)
T ss_pred HHHHC-CCEEEEEecCC--CCCCCHHHHHHhccc------CCeEEEEEcccCCCccccCH---HHHHHHHHHcCCEEEEe
Confidence 3444 99999999874 356899999988864 67899999999999999884 56788888999999999
Q ss_pred ccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH-HHHH-----HHhccc
Q 037587 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV-VSAA-----TKMSSF 302 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-~~~~-----~~~~~~ 302 (464)
+++. ++.. + .++. ..+..+++.|++|.+|.+| +|+++.++... ...+ ......
T Consensus 177 ~a~~---~g~~--~-~~~~-------------~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~ 235 (382)
T TIGR03403 177 AVQA---IGKI--P-VDVQ-------------KAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRS 235 (382)
T ss_pred chhh---cCCC--c-cCcc-------------ccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCccc
Confidence 9986 3222 1 1211 1133477899999988778 58876643211 0000 000123
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---cEEEEEecCcccccCChhHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNA---GLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~~ 378 (464)
++++.+.+.++..+++. ..++++..++++++.++++.+.|.++ |+.+..+.. ..++.+.++. . . ..
T Consensus 236 gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~-~~ 305 (382)
T TIGR03403 236 GTLNVPYIVAMGEAMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG-V-----E-GE 305 (382)
T ss_pred CCcChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC-C-----C-HH
Confidence 45667777666666642 23446667788888999999999876 777775431 2255555542 1 1 12
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
++... |.++||.|+.|..|... ..+.+|+|++. .+++++++++++|++++++.+.
T Consensus 306 ~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 306 AMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred HHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34555 46789999987655311 12579999988 7999999999999998887653
No 152
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=6e-24 Score=212.36 Aligned_cols=304 Identities=13% Similarity=0.142 Sum_probs=203.5
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
...++++.+|++++ + +++++++|+++++..++.+++++||.|+++.++|......+... |++++.++.+
T Consensus 64 ~~~~l~~~lA~~~g--------~--~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v~~~ 132 (387)
T PRK09331 64 PIADFHEDLAEFLG--------M--DEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERA-GLNVREVPKT 132 (387)
T ss_pred HHHHHHHHHHHHhC--------C--CcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeCc
Confidence 46889999999985 3 46788999999999999999999999999999987766666666 9999999974
Q ss_pred CCCCcccCHHHHHHHHHHHh-hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 165 SSNGFRITISALENAYQQAQ-TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~-~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.+.++.+|++.+++.+++.. ..++++++|++++|+||||... ++++|+++|+++|+++|+|++|+. +.. +
T Consensus 133 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~---~l~~I~~la~~~g~~livD~a~~~---g~~--~- 203 (387)
T PRK09331 133 GYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA---DAKKVAKVAHEYGIPFLLNGAYTV---GRM--P- 203 (387)
T ss_pred cCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc---cHHHHHHHHHHcCCEEEEECCccc---CCc--C-
Confidence 33467799999999987531 1224789999999999999885 577888999999999999999983 221 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--------C-CCChHHHHHHH
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--------G-LVSSQTQYLLS 314 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--------~-~~s~~~q~~~~ 314 (464)
.+...+ +..+++.|++|+++ ++.|+||++++++.+....+....+ . +.......++.
T Consensus 204 ~~~~~~-------------g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (387)
T PRK09331 204 VDGKKL-------------GADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLM 269 (387)
T ss_pred CCHHHc-------------CCCEEEeeCccccc-CCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHH
Confidence 121111 45578899999998 5669999999654333322221111 1 11111111111
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee---cCCccEEEEEecCcccc--cCChhHHHHHHHHHHHhc
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL---KSNAGLFCWVDMRHLLV--SNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~---~~~~g~f~~~~l~~~~~--~~~~~~~~~l~~~ll~~~ 388 (464)
..+ +...+..+ ..++..++.+++.+.|.++ |++++ ++..+ ++.++.+.... ........++...| +++
T Consensus 270 aal---~~~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~ 343 (387)
T PRK09331 270 ASF---PHVVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHD-LMKFETPSFDEIAKKHKRRGFFLYEEL-KKR 343 (387)
T ss_pred HHH---HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCC-eEEEeCCchhHHhhhccccchhHHHHH-HHc
Confidence 222 11122232 2333455667888999999 99887 33343 56666662100 00001112455665 577
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 389 GLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
||...+. .....+|+.....++++++.++++|++++++.+
T Consensus 344 gI~~~~~-----~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 344 GIHGIKP-----GATKEFKLSTYGLTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred CceEEcc-----CCceEEEEEeccCCHHHHHHHHHHHHHHHHhcC
Confidence 9984322 124467777744689999999999999987643
No 153
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.93 E-value=5.7e-24 Score=214.99 Aligned_cols=350 Identities=15% Similarity=0.106 Sum_probs=216.0
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||..+ .+.+. +|.+.+++.+.. .....|+...+..++...+++.+.+.++
T Consensus 29 ~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~l~~~~~-- 93 (413)
T cd00610 29 YLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQL-------------AKLTHFSLGFFYNEPAVELAELLLALTP-- 93 (413)
T ss_pred EEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHH-------------HhCcCccCcccCCHHHHHHHHHHHHhCC--
Confidence 3333455678999876 33443 466666665542 2234555433445666666666665543
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCC------------CcEEEEEecCCC----
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRP------------GVEIVPIHCSSS---- 166 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~------------g~~~~~v~~~~~---- 166 (464)
.+.+++++++|+++++..++..+. .+++.|++.+++|++......... +.+++.+|.++.
T Consensus 94 --~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (413)
T cd00610 94 --EGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP 171 (413)
T ss_pred --CCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccch
Confidence 367899999999999999998873 578999999999988544322211 223555655421
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
..+..|++.|++.+++. ..++++ ++++| +|++|.++ +.+.+++|.++|+++|+++|+||+|.++...+. . .
T Consensus 172 ~~~~~d~~~l~~~l~~~---~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~--~-~ 244 (413)
T cd00610 172 AELADDLEALEEALEEH---PEEVAA-VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK--M-F 244 (413)
T ss_pred hhHHHHHHHHHHHHhcC---CCCEEE-EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc--h-h
Confidence 12445788888887541 124554 55556 67779876 677799999999999999999999986422221 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH--HHhc--ccCCCChHHHHHHHHHcCCc
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA--TKMS--SFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~--~~~~--~~~~~s~~~q~~~~~~l~~~ 320 (464)
. .... +...-+.||||.++ .|+|+||++++ +.+.+.+ .... ..+..+++.+.++.+.++.-
T Consensus 245 ~-~~~~------------~~~~d~~t~sK~l~-~g~~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l 309 (413)
T cd00610 245 A-FEHF------------GVEPDIVTLGKGLG-GGLPLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL 309 (413)
T ss_pred h-Hhhc------------CCCCCeEEEccccc-CccccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 1 1111 11112458999999 58999999984 4455543 2222 12345667777766665321
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISP 394 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~p 394 (464)
. + ....+.++++.+++.+.|++. ++.......|.++|+.++..... .......+++..++ ++||.+.|
T Consensus 310 ~---~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~ 383 (413)
T cd00610 310 E---E--EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRP 383 (413)
T ss_pred H---h--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEee
Confidence 1 1 122334444445555555443 22222233467888888643110 01122335666665 67999998
Q ss_pred CCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 395 GSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 395 g~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+. .+++|++++. .+++++++++++|++++
T Consensus 384 ~~------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 384 SG------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred cC------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 74 4679999876 68999999999998763
No 154
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.4e-23 Score=210.41 Aligned_cols=309 Identities=16% Similarity=0.149 Sum_probs=222.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPI 161 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v 161 (464)
+..++++.+.+.+.+.++ +++ +.+++++|+++++..++..++++||+|++.++.|.+. ...++.. |++++.+
T Consensus 39 ~~~~~~~~~~~~l~~~~g----~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~-g~~v~~v 113 (401)
T PLN02409 39 AFPALTKELLEDVKYIFK----TKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRL-NFDVDVV 113 (401)
T ss_pred HHHHHHHHHHHHHHHHhC----CCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHc-CCceEEE
Confidence 457788888888877766 443 4688899999999999999999999999999988655 3445555 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+.. ..+|++.+++.+++. .++++++|++++++||||.++|.+++.++++ |+++|+++|+|++++ ++..
T Consensus 114 ~~~~~--~~~~~~~l~~~l~~~--~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g~~~vvD~v~s---~g~~-- 183 (401)
T PLN02409 114 ESPWG--QGADLDILKSKLRQD--TNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHPALLLVDGVSS---IGAL-- 183 (401)
T ss_pred ECCCC--CCCCHHHHHHHHhhC--cCCCccEEEEEeecccccccCCHHHHHHHHh-hhccCcEEEEEcccc---cCCc--
Confidence 97643 347899999988641 0136899999999999999999877777766 999999999999987 3322
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc------------------c--
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS------------------S-- 301 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~------------------~-- 301 (464)
+ .++. ..+..+++.|.+|+++.| .++||++.+++.+ +.+.... .
T Consensus 184 ~-id~~-------------~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 247 (401)
T PLN02409 184 D-FRMD-------------EWGVDVALTGSQKALSLP-TGLGIVCASPKAL-EASKTAKSPRVFFDWADYLKFYKLGTYW 247 (401)
T ss_pred c-cccc-------------ccCccEEEEcCccccCcC-CCcceeEECHHHH-HHHhcCCCCCeecCHHHHHHHHhcCCCC
Confidence 1 1111 224557788889999643 3699999865543 3332210 0
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccEEEEEecCcccccCChhHH
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~f~~~~l~~~~~~~~~~~~ 377 (464)
.++.+...+.++..+++.-. +..++..++++++..+++.+.|++.|++++.+. .+..+++.+|.....
T Consensus 248 ~~Tp~~~~~~al~~al~~~~--~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~------ 319 (401)
T PLN02409 248 PYTPSIQLLYGLRAALDLIF--EEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDS------ 319 (401)
T ss_pred CCCccHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCH------
Confidence 11334445555555554321 334677788888899999999988888876532 233456777643321
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.++...+++++||.+.+|..- ...+.|||+... .+++++..++++|++++.+...
T Consensus 320 ~~l~~~l~~~~~i~i~~G~~~--~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~ 375 (401)
T PLN02409 320 AEIVKNAWKKYNLSLGLGLNK--VAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGY 375 (401)
T ss_pred HHHHHHHHHhCCEEEEcCCCc--ccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 246777888899999988642 235789999966 7899999999999999988763
No 155
>PLN02242 methionine gamma-lyase
Probab=99.93 E-value=7.1e-24 Score=212.14 Aligned_cols=217 Identities=16% Similarity=0.168 Sum_probs=160.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~~~~v 161 (464)
..+|++.+|++++ .+.+++++|+++++..++.+++++||.|+++.|.|+.+...+. ...|++++.+
T Consensus 78 ~~~LE~~lA~l~g----------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 78 VLNLGRQMAALEG----------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 5788888888875 3456789999999999999999999999999999987765432 2238887766
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++.+++++++ .++++|++++|+||||.++ ++++|+++|+++|+++|+|++|..+.+..
T Consensus 148 d~~-------d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~--- 209 (418)
T PLN02242 148 DIT-------DLEAVKKAVVP-----GKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP--- 209 (418)
T ss_pred CCC-------CHHHHHHhcCc-----CCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH---
Confidence 542 78888888753 1489999999999999987 57888889999999999999997543311
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE-EEEEEecCHHHHHHHHHhcc----cCCCChHHHHHHHHH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR-VGMIYSNNERVVSAATKMSS----FGLVSSQTQYLLSRM 316 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR-iG~l~~~~~~~~~~~~~~~~----~~~~s~~~q~~~~~~ 316 (464)
..+ +..++++||||.++.+|.+ .||++++++ +.+.+..... ....+...|.++..+
T Consensus 210 -----~~~-------------g~divv~S~SK~l~g~g~~~gG~iv~~~~-li~~l~~~~~~~~~~~g~~~~~~~A~l~~ 270 (418)
T PLN02242 210 -----ARL-------------GADVVVHSISKFISGGADIIAGAVCGPAE-LVNSMMDLHHGALMLLGPTMNPKVAFELS 270 (418)
T ss_pred -----HHc-------------CCcEEEEeCccccCCCCCceEEEEEcCHH-HHHHHHHHhhhhhhccCCCCCHHHHHHHH
Confidence 111 3568899999999888877 599998554 4444443322 223344566666665
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK 354 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 354 (464)
.... . +..+++++.++++.+.+.|++++++|..
T Consensus 271 ~~l~-t----l~~r~~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 271 ERLP-H----LSLRMKEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred cCCC-c----HHHHHHHHHHHHHHHHHHHHhCCCEEEC
Confidence 5533 2 4445667888999999999998877763
No 156
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.93 E-value=2.9e-23 Score=209.77 Aligned_cols=286 Identities=15% Similarity=0.132 Sum_probs=186.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-----cccCCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-----LKWRPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
++..+|++++| ++++..++.+++++||+|+++.|+|..+... +... |++++.+++++ +++.+|++++++.++
T Consensus 86 ~~~~~i~~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~i~ 162 (416)
T PRK00011 86 AEYANVQPHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGK-LYNVVSYGVDE-ETGLIDYDEVEKLAL 162 (416)
T ss_pred CCceeeecCCc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccc-eeeEeecCcCc-ccCCcCHHHHHHHHH
Confidence 45566766665 6789999999999999999999999765321 1222 67888887763 347899999999886
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
+ .++++|+++++++| ... ++++|.++|+++|+++|+|++|........ ..... + .
T Consensus 163 ~-----~~~k~v~~~~~~~~--~~~---~~~~I~~la~~~~~~livD~a~~~g~~~~g--~~~~~--~-----------~ 217 (416)
T PRK00011 163 E-----HKPKLIIAGASAYS--RPI---DFKRFREIADEVGAYLMVDMAHIAGLVAAG--VHPSP--V-----------P 217 (416)
T ss_pred h-----cCCCEEEECCCcCC--Ccc---CHHHHHHHHHHcCCEEEEECcchhcccccC--ccCCC--C-----------C
Confidence 4 16788888766554 333 478889999999999999999863211111 00110 0 1
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCC---hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVS---SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRK 338 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (464)
...+++.|+||++ +|.|.||++++++.+.+.++.....+..+ ...+.++..++.. ...+.+++.++++++++
T Consensus 218 -~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~ 292 (416)
T PRK00011 218 -HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKE--ALEPEFKEYAQQVVKNA 292 (416)
T ss_pred -CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHH
Confidence 2346789999976 78899999997666666665544332211 1222222222211 11234567778888899
Q ss_pred HHHHHHHHhCCCeeecC-CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC-CCC---CCCCCeEEEEee--
Q 037587 339 EMLVSGLKVAGIRCLKS-NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS-SCH---CNEPGWFRICFA-- 411 (464)
Q Consensus 339 ~~l~~~l~~~g~~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~-~f~---~~~~~~~Ris~~-- 411 (464)
+++.+.|++.|+++.+. ..++++|+.++... . ...++.. .|+++||.+..+. .+. +..+..+|++..
T Consensus 293 ~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~----~-~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~ 366 (416)
T PRK00011 293 KALAEALAERGFRVVSGGTDNHLVLVDLRSKG----L-TGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAI 366 (416)
T ss_pred HHHHHHHHhCCCeeeecCCCCeEEEEeCcccC----C-CHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHH
Confidence 99999999989877641 22378999986321 0 1123444 4567899997432 111 112456999641
Q ss_pred ---cCCHHHHHHHHHHHHHHHHh
Q 037587 412 ---NITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 412 ---~~~~e~l~~~l~~l~~~l~~ 431 (464)
.+++++++.+++.|++++..
T Consensus 367 ~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 367 TTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred hhcCcCHHHHHHHHHHHHHHHhc
Confidence 24689999999999998886
No 157
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.93 E-value=1e-23 Score=212.03 Aligned_cols=327 Identities=17% Similarity=0.168 Sum_probs=216.2
Q ss_pred CceEEeecccccccHHH-HHHHHHhhhhhHHhhhcccccccccccCCC-----CCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAENQLSFDL-LESWLASNQEAVELKRNGESLFRELALFQD-----YHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.+++.|+++...+++|. +.++..+. .....|.+ ..|.+++++++++++.+.++ ++.
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~--------------~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g----~~~ 81 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN--------------EFYTAYTPYQPEISQGRLQALFELQTMLCELTG----MDV 81 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc--------------cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHC----CCc
Confidence 35689999888886544 44433331 01234544 57889999999999998876 455
Q ss_pred CcEEEeC-ChHHHHHHHHHHhcCC--CCeEEEcCCCCCChhhhcccCCC----cEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 110 NKLVLTA-GSTAANETLMFCLADP--GDAFLLPTPYYPGFDRDLKWRPG----VEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 110 ~~i~it~-G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~~g----~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+++++++ |++++...++.+++.+ ||.|++++|.|+.+...+... | ++++.++.+. ++.+|++.+++.+.+
T Consensus 82 ~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~-~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 158 (398)
T cd00613 82 ANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTR-GEPLGIEVVEVPSDE--GGTVDLEALKEEVSE 158 (398)
T ss_pred cceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHh-cccCCcEEEEeccCC--CCCcCHHHHHHhcCC
Confidence 5777776 4545555666666666 999999999999887776554 5 8888888753 456899999988753
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (464)
++++|++++|+ |||.+. +.+++|.++|+++|+++|+|+++.... .. .... ..
T Consensus 159 ------~t~~viv~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~--~~----~~~~-------------~~ 210 (398)
T cd00613 159 ------EVAALMVQYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT--GL----KPPG-------------EY 210 (398)
T ss_pred ------CeEEEEEECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc--CC----CChH-------------Hc
Confidence 78999999985 899984 457999999999999999999875321 11 0100 12
Q ss_pred CcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHHHh------------------------------cc-cCCCC-
Q 037587 263 SRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAATKM------------------------------SS-FGLVS- 306 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~~~------------------------------~~-~~~~s- 306 (464)
+..+++.|+||.+ +| |+|+||++.+++ +.+.+... .. ....+
T Consensus 211 ~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~ 288 (398)
T cd00613 211 GADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQA 288 (398)
T ss_pred CCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHH
Confidence 4568899999998 55 799999998554 33322000 00 01111
Q ss_pred hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEE--EEEecCcccccCChhHHHHHHHHH
Q 037587 307 SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLF--CWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 307 ~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f--~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
...+.+...+.... ...+++.+++++++++++.+.|++++... .+.+.++ ++++++... . ....+++..|
T Consensus 289 ~~~~~a~~~l~~~~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~v~~~~~~~~---~-~~~~~~~~~L 360 (398)
T cd00613 289 LLALMAAMYIVYLG---PEGLKEIAERAHLNANYLAKRLKEVGGVL-PFNGPFFHEFVLRLPPLY---G-IRAEDLAKAL 360 (398)
T ss_pred HHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCeeEEEEEEcCCcc---h-HHHHHHHHhh
Confidence 12333333332221 23466777888889999999999875433 2233333 566665310 0 1233567776
Q ss_pred HHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 385 IFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
+ ++||.+.... ....+.+|+++.. .++++++++++.|
T Consensus 361 ~-~~gi~~~~~~---~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 361 I-DGGFHAPTMY---LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred h-hcCccccccc---cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 5 6699864321 1235789999977 7899999998764
No 158
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.93 E-value=3.9e-24 Score=210.90 Aligned_cols=298 Identities=15% Similarity=0.172 Sum_probs=210.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC------------C--CCeEEEcCCCCC
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD------------P--GDAFLLPTPYYP 144 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~------------~--gd~Vlv~~p~y~ 144 (464)
.|....+..++++++++++.+.+|. +.+++++++|+|+++++..++.++.. + ++.|+++.++|.
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~--~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~ 106 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGL--PSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHV 106 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCC--CCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchh
Confidence 4777778899999999999988772 22456899999999999999988742 2 347888999998
Q ss_pred ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeE
Q 037587 145 GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIH 224 (464)
Q Consensus 145 ~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~ 224 (464)
.+...+... |.+++.++++++ +.+|++.|++.+.+....+.++++|++++|+||||.+. ++++|+++|+++|++
T Consensus 107 ~~~~~~~~~-g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~---~~~~i~~~~~~~~~~ 180 (345)
T cd06450 107 SVEKAAAYL-DVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID---PLEEIADLAEKYDLW 180 (345)
T ss_pred HHHHHHHHH-hcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC---CHHHHHHHHHHhCCe
Confidence 887777766 999999998753 47899999999976444555778889999999999984 578889999999999
Q ss_pred EEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCC
Q 037587 225 IVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL 304 (464)
Q Consensus 225 lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~ 304 (464)
+++|++|+.+.+... ..... ... ..+...+..|++|.++ ++.++|+++.+
T Consensus 181 l~vD~a~~~~~~~~~--~~~~~---~~~--------~~~~d~~~~s~~K~l~-~p~g~g~~~~~---------------- 230 (345)
T cd06450 181 LHVDAAYGGFLLPFP--EPRHL---DFG--------IERVDSISVDPHKYGL-VPLGCSAVLVR---------------- 230 (345)
T ss_pred EEEechhhHHHhhCh--hhHHH---hcC--------ccccCEEEEchhHhhC-CCcchHHHHHH----------------
Confidence 999999986543221 10110 010 1123455679999775 77789988764
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCccEEEEEecCcccccCChhHHHHHHH
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
.+.+.++...+... .+++.++...+.++++.+.|.++ ++.+. +++++ ++.+.++.... .. ....++..
T Consensus 231 --~~~~~~~l~~l~~~-----g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~~-~~-~~~~~i~~ 300 (345)
T cd06450 231 --ALKLWATLRRFGRD-----GYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSVK-LD-ELNYDLSD 300 (345)
T ss_pred --HHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcch-hh-HHHHHHHH
Confidence 33444444444432 24556666777888888888887 67665 35666 44455543100 01 12234666
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-C-CHHHHHHHHHHHHH
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-I-TEETLQVALQRIKV 427 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~-~~e~l~~~l~~l~~ 427 (464)
.| .++|+.+.++..+. ..+++|++++. . ++++++++++.|++
T Consensus 301 ~L-~~~g~~~~~~~~~~--~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RL-NERGGWHVPATTLG--GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HH-HhcCCEEEEeeEEC--CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 66 46666666554443 46789999986 3 88999999999875
No 159
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.93 E-value=1.5e-22 Score=201.74 Aligned_cols=297 Identities=17% Similarity=0.189 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD----PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.++.+.+.+.+.+.+| ++++++++++|+++++..++.++.. +|++|++.++.|..+...++.. |++++.++
T Consensus 58 ~~~~~~~~~~la~~~g----~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~-g~~~~~v~ 132 (371)
T PRK13520 58 AKLEEEAVEMLGELLH----LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADML-GVELRRAP 132 (371)
T ss_pred HHHHHHHHHHHHHHhC----CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHc-CceEEEec
Confidence 4433444444444333 5566889999999999999877654 5789999999998888777766 99999998
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.+. ++.+|++.|++.+.+ +++.|++++++||||.+.+ +++|.++|+++|+++++|++|..+...... .
T Consensus 133 ~~~--~~~~d~~~l~~~i~~------~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~-~ 200 (371)
T PRK13520 133 LDD--DYRVDVKAVEDLIDD------NTIGIVGIAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLD-D 200 (371)
T ss_pred CCC--CCcCCHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhc-C
Confidence 763 457899999999875 6777888888999999976 677788888999999999999864321110 0
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC----------CCChHHHHH
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG----------LVSSQTQYL 312 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----------~~s~~~q~~ 312 (464)
... ... . ..+...+..|.+| ++++|.++|+++..++.+...+....++. +.+.....+
T Consensus 201 ~~~-~~~-~---------~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~ 268 (371)
T PRK13520 201 PPN-FDF-S---------LPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAA 268 (371)
T ss_pred CCC-ccc-c---------CCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHH
Confidence 000 001 0 1123344557788 45688899988876665544443222221 112233444
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeE
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~ 391 (464)
+..+++.-. .+.+++.+++..+.++++.+.|++.|++ +..+..+ ++.++++. ..++...|. ++||.
T Consensus 269 ~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~---------~~~v~~~L~-~~gi~ 335 (371)
T PRK13520 269 TYAVMKYLG--REGYRKVVERCMENTRWLAEELKERGFEPVIEPVLN-IVAFDDPN---------PDEVREKLR-ERGWR 335 (371)
T ss_pred HHHHHhhhc--HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCce-EEEEecCC---------HHHHHHHHH-HCCce
Confidence 444443211 2234566777778888999999888887 5556665 66677652 124556654 56999
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 392 ISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 392 v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
|.++. .++++||+++. .++++++.+++.|+++++
T Consensus 336 v~~~~-----~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 336 VSVTR-----CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred eccCC-----CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 98753 24689999875 689999999999998765
No 160
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=2.4e-23 Score=207.85 Aligned_cols=293 Identities=16% Similarity=0.204 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChhh---hcccCCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDR---DLKWRPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~ 160 (464)
.++|+.++++++ +++++|++|+|+++++..++.++. .+|+.|++....|+.+.. .++.. |++++.
T Consensus 45 ~~~r~~la~~~g--------~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~-G~~v~~ 115 (379)
T TIGR03402 45 EEAREQVAKLLG--------AEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQ-GYKVTY 115 (379)
T ss_pred HHHHHHHHHHhC--------CCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHc-CCEEEE
Confidence 466677777765 678899999999999999988764 456889998888876543 23334 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++++. ++.+|++.+++.+++ +++++++++++||||.++|. ++|.++|+++|+++++|++++ ++..
T Consensus 116 v~~~~--~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~~~~---~g~~- 180 (379)
T TIGR03402 116 LPVDE--EGRLDLEELRAAITD------DTALVSVMWANNETGTIFPI---EEIGEIAKERGALFHTDAVQA---VGKI- 180 (379)
T ss_pred EccCC--CCcCCHHHHHHhcCC------CcEEEEEEcccCCeeecccH---HHHHHHHHHcCCEEEEECccc---cccc-
Confidence 98763 456899999998864 78899999999999999885 568888999999999999997 3322
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHH-HH-----HHhcccCCCChHHHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-AA-----TKMSSFGLVSSQTQYLLS 314 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~~-----~~~~~~~~~s~~~q~~~~ 314 (464)
+ .++.. .+..+++.|.+|.+|.+| +|+++.+++.... .. ......++.+.....++.
T Consensus 181 -~-~~~~~-------------~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~ 243 (379)
T TIGR03402 181 -P-IDLKE-------------MNIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLG 243 (379)
T ss_pred -c-cCccc-------------CCCCEEEEcHHHcCCCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHH
Confidence 1 12111 144567788899777666 7888765432100 00 000112234444444444
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeecCC-----ccEEEEEecCcccccCChhHHHHHHHHHHHh
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-A-GIRCLKSN-----AGLFCWVDMRHLLVSNTFEAEKELWKKIIFE 387 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~-----~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~ 387 (464)
++++. ..++++...+.+++.++++.+.|.+ + ++.+..+. +...+|++... ..++... |++
T Consensus 244 ~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-l~~ 310 (379)
T TIGR03402 244 KAAEL---ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE---------GEAILLL-LDM 310 (379)
T ss_pred HHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC---------HHHHHHh-hcc
Confidence 44432 2345666667778888888888875 4 66665432 22334443221 1235554 467
Q ss_pred cCeEEeCCCCCCCCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 388 VGLNISPGSSCHCNE-----------------PGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 388 ~gI~v~pg~~f~~~~-----------------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+||.|++|..|.... .+.+|+|++. .++++++++++.|++++++.+
T Consensus 311 ~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 311 EGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 899999998765431 3689999988 799999999999999987754
No 161
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=1.5e-22 Score=201.81 Aligned_cols=291 Identities=14% Similarity=0.161 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA------DPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~------~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
.++++.+|++++ ++++++++++|+++++..++.++. ++||.|++++++|..+...++.. |++++.
T Consensus 62 ~~~~~~la~~~g--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~-G~~~~~ 132 (373)
T TIGR03812 62 EEVVGSLGNLLH--------LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEML-GLELRY 132 (373)
T ss_pred HHHHHHHHHHhC--------CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHc-CCeEEE
Confidence 445555665554 667889999999999988877654 46799999999999888877766 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC--C
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD--S 238 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~--~ 238 (464)
++.+. ++.+|++++++.+.+ ++..++++.|+||||.+.+ +++|.++|+++|+++|+|++|..+... .
T Consensus 133 v~~~~--~~~~d~~~l~~~l~~------~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~ 201 (373)
T TIGR03812 133 APLDE--DYTVDVKDVEDLIDD------NTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLK 201 (373)
T ss_pred EeeCC--CCCcCHHHHHHHHhh------CcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHh
Confidence 99763 567899999998865 4445555568999999965 666788888999999999999754221 0
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC----------CCChH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG----------LVSSQ 308 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----------~~s~~ 308 (464)
.......+ .+. ......+..|.+| +++++.|+|+++..++.+.+.+....++. +.+..
T Consensus 202 ~~~~~~~~-d~~----------~~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~ 269 (373)
T TIGR03812 202 KGYNPPPF-DFS----------LPGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGA 269 (373)
T ss_pred cCCCCCCc-ccc----------CCCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhH
Confidence 00000000 000 0012233457889 66688899877654554544443222221 12223
Q ss_pred HHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHh
Q 037587 309 TQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFE 387 (464)
Q Consensus 309 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~ 387 (464)
...++..+++.-. ++.+++..+++.+.++++.+.|+++|+. +.++..+ ++.+.++.. .++...| .+
T Consensus 270 ~~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~v~~~~~~~---------~~v~~~L-~~ 336 (373)
T TIGR03812 270 SAAATYAVIKYLG--REGYRKIVAECMENTRYLVEELKKIGFEPVIEPVLN-IVAFEVDDP---------EEVRKKL-RD 336 (373)
T ss_pred HHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcCCCce-EEEEEeCCH---------HHHHHHH-HH
Confidence 3444444444211 3345667788888899999999988764 4455554 666766531 1455666 46
Q ss_pred cCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 388 VGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 388 ~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
+||.|+++. .++++|++++. .++++++.++++|++
T Consensus 337 ~gi~v~~~~-----~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 337 RGWYVSVTR-----CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CCceeccCC-----CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 799998653 25689999976 689999999999875
No 162
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.92 E-value=7.3e-23 Score=205.75 Aligned_cols=337 Identities=14% Similarity=0.128 Sum_probs=213.0
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+|||..+ .+.+ ..|.+.+++.+.... ...+..... .+....+++.+.+..
T Consensus 32 ~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~-------------~~~~~~~~~-~~~~~~l~~~l~~~~-- 95 (403)
T PRK05093 32 SRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEK-------------LWHISNVFT-NEPALRLAKKLIDAT-- 95 (403)
T ss_pred CEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHh-------------cCcccCccC-CHHHHHHHHHHHhhC--
Confidence 34445556778999765 3344 346666666554211 111111111 222345555554321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChhhhcccCCC------------cEEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA--------DPGDAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~ 163 (464)
..+.+++++++++++..+++... ...+.|+..+-+|++....+....| .+++.++.
T Consensus 96 ----~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (403)
T PRK05093 96 ----FAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF 171 (403)
T ss_pred ----CCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC
Confidence 23689999999999999988641 1235688888887765332111101 11222221
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC--CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM--THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~--s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.|++.+++.+.+ ++++|++. |.||+|.++ +.+.+++|+++|++||+++|+||+|.++.+.+.
T Consensus 172 -------~d~~~l~~~l~~------~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-- 235 (403)
T PRK05093 172 -------NDLAAVKAVIDD------HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD-- 235 (403)
T ss_pred -------CCHHHHHHHhcC------CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--
Confidence 167888887743 67766665 888888765 889999999999999999999999997644433
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-c-ccCCCChHHHHHHHHHcCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-S-SFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~~ 319 (464)
. .+.. .. +. .++ +.||||+++ +|+|+||+++++ .+.+.+... . ..+..+++.|.++.++|+.
T Consensus 236 ~-~~~~-~~-~~-------~pd----i~s~sK~l~-~G~rig~vv~~~-~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~ 299 (403)
T PRK05093 236 L-FAYM-HY-GV-------TPD----ILTSAKALG-GGFPIGAMLTTA-EIASHFKVGTHGSTYGGNPLACAVAEAVFDI 299 (403)
T ss_pred c-hhhh-hc-CC-------CCC----EEEeccccc-CCcceEEEEEcH-HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 1 1111 11 11 112 569999999 999999999955 454444321 1 2234678889888886642
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
.. ..+.++.++++++++.+.|++++ +....+..|+++|+.++.... ....+++..++ ++||.+.|+
T Consensus 300 ~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~----~~~~~~~~~l~-~~Gv~v~~~ 369 (403)
T PRK05093 300 IN-----TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK----GRARDFLNAAA-EEGVMVLVA 369 (403)
T ss_pred Hh-----hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch----hHHHHHHHHHH-HCCeEEecC
Confidence 11 12344667778888888887753 222344568999999864210 12346777776 469999874
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 396 SSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+.+++||+++. .+++++++++++|++++.+.
T Consensus 370 ------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 370 ------GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 24689998776 58999999999999998653
No 163
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.8e-22 Score=203.10 Aligned_cols=299 Identities=15% Similarity=0.104 Sum_probs=199.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
..+|.+.+|++++ . +..++++++++++..++.++.. +||.|++....|......+... |.++..++.
T Consensus 92 ~~~le~~la~~~g---------~-~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~-g~~~~~~~~ 160 (406)
T PRK13393 92 HVLLEAELADLHG---------K-EAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHS-RAEKRIFRH 160 (406)
T ss_pred HHHHHHHHHHHhC---------C-CcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHc-CCeEEEeCC
Confidence 3566666776653 2 3445555555788888887765 7887777777776666666655 777766653
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.|++.+++.++.. ..+++++|++++++||+|.+.+ +++|.++|+++++++|+||+|+...++..+
T Consensus 161 -------~d~~~l~~~l~~~--~~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G--- 225 (406)
T PRK13393 161 -------NDPADLERKLSDL--DPHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRG--- 225 (406)
T ss_pred -------CCHHHHHHHHHhc--cCCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCC---
Confidence 3677787776532 1235788899999999999987 777888888999999999999844344331
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-c---CCCChHHHHHHHHHcCC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-F---GLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~---~~~s~~~q~~~~~~l~~ 319 (464)
..+... .++ ..+.+++++||||+||++| ||++++ +.+.+.+..... + ...++..+.++.++++.
T Consensus 226 ~g~~~~-~~~-------~~~~~i~~~tlsKa~g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 226 GGIAER-EGL-------ADRLTIIEGTLAKAFGVMG---GYITGS-AALCDFIRSFASGFIFTTSLPPAVAAGALASVRH 293 (406)
T ss_pred Cchhhh-cCC-------CCCCeEEEEeCchhhcccC---ceeeCC-HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHH
Confidence 111111 111 1234677899999999888 999884 445555544332 2 12345556666666653
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
.. +.. ..+..+.++++++.+.|++.|+++.++.++ ++.+.++.. ....++...|++++||.++++....
T Consensus 294 ~~---~~~-~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-i~~v~~~~~------~~~~~l~~~L~~~~Gi~v~~~~~p~ 362 (406)
T PRK13393 294 LK---ASS-AERERHQDRVARLRARLDKAGIPHLPNPSH-IVPVMVGDP------VLCKQISDELLDRYGIYVQPINYPT 362 (406)
T ss_pred Hh---hCH-HHHHHHHHHHHHHHHHHHHcCCCcCCCCCC-eEEEEeCCH------HHHHHHHHHHHHhCCEEEEeECCCC
Confidence 21 111 224556778889999998888887777776 555544321 1234577777765799999865432
Q ss_pred C-CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 400 C-NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 400 ~-~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. .+.+++||+++. .+++++++++++|++++++..
T Consensus 363 ~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~ 398 (406)
T PRK13393 363 VPRGTERLRITPSPLHTDADIEHLVQALSEIWARLG 398 (406)
T ss_pred CCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcC
Confidence 2 234689999976 689999999999999987653
No 164
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=4.3e-23 Score=205.94 Aligned_cols=295 Identities=16% Similarity=0.157 Sum_probs=198.6
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEE
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFD-PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEI 158 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~ 158 (464)
.+..++|+.++++++ ++ .++|++|+|+++++..++.+++++||+|++..++|+.+.. .++.. |+++
T Consensus 44 ~~~~~~~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLFN--------APSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQI-GVEI 114 (376)
T ss_pred HHHHHHHHHHHHHhC--------cCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHc-CcEE
Confidence 345688888888886 33 4589999999999999999999999999999999877543 23334 8999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
+.++.+. ++.+|++.+++.+++ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++++ ++.
T Consensus 115 ~~v~~~~--~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~~---~~i~~l~~~~~~~livD~a~~---~g~ 180 (376)
T TIGR01977 115 TIVKCDN--EGLISPERIKRAIKT------NTKLIVVSHASNVTGTILPI---EEIGELAQENGIFFILDAAQT---AGV 180 (376)
T ss_pred EEEecCC--CCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCCH---HHHHHHHHHcCCEEEEEhhhc---cCc
Confidence 9998763 466899999998854 78999999999999999984 567888889999999999997 322
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH----h--------------c
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK----M--------------S 300 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~----~--------------~ 300 (464)
. + ..+. ..+..+++.|++|.++.|. .+|.++..++.....+.. . .
T Consensus 181 ~--~-~~~~-------------~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 243 (376)
T TIGR01977 181 I--P-IDMT-------------ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRF 243 (376)
T ss_pred c--C-CCch-------------hcCCCEEEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhc
Confidence 2 1 1111 1245577899999885332 356665544321111000 0 0
Q ss_pred ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----CccEEEEEecCcccccCChh
Q 037587 301 SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS----NAGLFCWVDMRHLLVSNTFE 375 (464)
Q Consensus 301 ~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~f~~~~l~~~~~~~~~~ 375 (464)
...+.+.....++..+++.-. +.-.+..+++.++..+.+.+.|.+. |+++..+ ..+..+++.++.. .
T Consensus 244 ~~~t~~~~~~~a~~~al~~~~--~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~----- 315 (376)
T TIGR01977 244 ESGTLNTPGIAGLNAGIKFIE--KIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-D----- 315 (376)
T ss_pred cCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-C-----
Confidence 011233333333443432111 1123445666677777888888765 6766543 1233666776531 1
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCC--------CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHC--------NEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~--------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
..++...|.+++||.+.+|..+.. ...+.+||+++. .++++++.++++|++
T Consensus 316 -~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 -SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred -HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 124566665445999998875532 235789999987 799999999999875
No 165
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.7e-22 Score=201.52 Aligned_cols=337 Identities=14% Similarity=0.115 Sum_probs=212.5
Q ss_pred CCCCCCCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+.. .+ .+|.+.+++.+..+ ...... .....++++.+++++.+..+
T Consensus 21 ~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~-------------~~~~~~-~~~~~~~~~~la~~l~~~~~- 85 (377)
T PRK02936 21 TKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLD-------------DIWHVS-NLFTNSLQEEVASLLAENSA- 85 (377)
T ss_pred CEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hccccc-cccCCHHHHHHHHHHHhcCC-
Confidence 3444455677899987642 23 34666666665422 111111 12347899999999975422
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc-CCC-CeEEEcCCCCCChhhhcccCCCcEEE---EEecCCCCCcc--cCHHHH
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA-DPG-DAFLLPTPYYPGFDRDLKWRPGVEIV---PIHCSSSNGFR--ITISAL 176 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~---~v~~~~~~~~~--~d~~~l 176 (464)
.+.+++++++++++..++.... .+| +.|++.+++|++.........+.... ..++.++..+. .|++.+
T Consensus 86 -----~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 160 (377)
T PRK02936 86 -----GDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKAL 160 (377)
T ss_pred -----CCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHH
Confidence 3579999999999999998532 234 67999999987543221111122110 01111100010 167888
Q ss_pred HHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 177 ENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
++.+.+ ++++|++..+++++|.. .+++.+++|.++|++||+++|+||+|.++.+.+. . .+.. ...
T Consensus 161 ~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~--~-~~~~-~~~---- 226 (377)
T PRK02936 161 KEVMNE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGT--L-FAYE-QFG---- 226 (377)
T ss_pred HHhccC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--h-hHHH-hhC----
Confidence 887753 78888888778999876 5789999999999999999999999987544332 1 1111 111
Q ss_pred CCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHH
Q 037587 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKR 333 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 333 (464)
..+. +.||||.++ +|+|+||++++ +.+.+.+.... ..+..+++.|.++.++++.... ++ .++.
T Consensus 227 -----~~~d---i~t~sK~l~-~G~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~-~~----~~~~ 291 (377)
T PRK02936 227 -----LDPD---IVTVAKGLG-NGIPVGAMIGK-KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ-PS----FLEE 291 (377)
T ss_pred -----CCCc---EEEEccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-cc----HHHH
Confidence 1122 237999999 99999999995 45555443322 2234678899998888864321 12 2334
Q ss_pred HHHHHHHHHHHHHhC--CCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 334 LRKRKEMLVSGLKVA--GIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 334 ~~~~~~~l~~~l~~~--g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
++++.+.+.+.|.+. ++.. ..+ .|+++|++++.. ...+... +.++||.+.|+. .+++||
T Consensus 292 ~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~~~~--------~~~~~~~-l~~~gv~v~~~g------~~~lRi 355 (377)
T PRK02936 292 VQEKGEYFLQKLQEELEHLECVKNIRG-KGLMIGIECTEE--------VAPVIEQ-LREEGLLVLSAG------PNVIRL 355 (377)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEeEee-cceEEEEEecch--------HHHHHHH-HHHCCeEEecCC------CCEEEE
Confidence 445555555555542 2221 223 468999998742 2235554 467899998752 468999
Q ss_pred Eeec-CCHHHHHHHHHHHHHHH
Q 037587 409 CFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 409 s~~~-~~~e~l~~~l~~l~~~l 429 (464)
++.. .+++++++++++|++++
T Consensus 356 ~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 356 LPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ECCcccCHHHHHHHHHHHHHhC
Confidence 9743 68999999999998763
No 166
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.92 E-value=1.1e-22 Score=205.95 Aligned_cols=349 Identities=13% Similarity=0.087 Sum_probs=217.7
Q ss_pred CCCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCC-CCCCcHHHHHHHHHHHHHHcC
Q 037587 28 PYDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQ-DYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~ 102 (464)
.|..+.+...+||+..+. +.+ .+|.+.+++.+..+ +...|. +..+..+|+++|++++.
T Consensus 40 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~lae~l~~~~~---- 102 (423)
T TIGR00713 40 AYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE-------------RGTSYGAPTEAEILLAKEIISRVP---- 102 (423)
T ss_pred CEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCcCCCCCHHHHHHHHHHHHhCC----
Confidence 344455667889998663 222 45667777666422 112333 34467889999998863
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCC--CcEEEEEecCCC-------CCcc-
Q 037587 103 NKVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRP--GVEIVPIHCSSS-------NGFR- 170 (464)
Q Consensus 103 ~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~--g~~~~~v~~~~~-------~~~~- 170 (464)
..++|++++|+++++..+++... ...++|+...++|+++...+.... +......+..+. ..+.
T Consensus 103 -----~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (423)
T TIGR00713 103 -----SVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVL 177 (423)
T ss_pred -----cccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEe
Confidence 23689999999999999888632 345899999999998754322110 111110110000 0000
Q ss_pred --cCHHHHHHHHHHHhhcCCceEEEEE-eCCCCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccch
Q 037587 171 --ITISALENAYQQAQTLNLKVKGVLI-TNPSNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISI 246 (464)
Q Consensus 171 --~d~~~l~~~i~~~~~~~~~~~~vil-~~P~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~ 246 (464)
.|++++++.+.+. ..++++|++ +.|+| +|.+.+ .+.+++|.++|+++|+++|+||+|.++.++.. .....
T Consensus 178 ~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~--~~~~~ 251 (423)
T TIGR00713 178 PYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALG--GAQEY 251 (423)
T ss_pred CCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcc--hhHHH
Confidence 1688998888631 236778777 47788 798887 58899999999999999999999987633221 11111
Q ss_pred hhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc-----ccCCCChHHHHHHHHHcCCch
Q 037587 247 MEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS-----SFGLVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~ 321 (464)
..+ . +. +.||||.+| +|+|+||+++++ .+.+.+.... ..+..+++++.++.+.|+..+
T Consensus 252 ~~~-----------~-pD---i~t~sK~l~-~G~pig~v~~~~-~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~ 314 (423)
T TIGR00713 252 FGV-----------E-PD---LTTLGKIIG-GGLPVGAFGGRR-EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLD 314 (423)
T ss_pred hCC-----------C-cc---hhhhhhhhc-CCCceeeeeEHH-HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHh
Confidence 111 1 22 348999999 999999999954 4555443211 122467788888777765221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcccc-------cCChhHHHHHHHHHHHhcCeEEe
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHLLV-------SNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~~~-------~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
- ..+.++.++..+..++.+.+.++++++.+. .+.++ ++.+.+..... ..+......++..++ ++||.+.
T Consensus 315 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~ 391 (423)
T TIGR00713 315 E-EGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGS-MFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLP 391 (423)
T ss_pred c-ccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeecc-EEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEe
Confidence 1 113555666666677778887887776553 23444 44443321100 001111224666666 5799987
Q ss_pred CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 394 PGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++ .| +.+|+++. .+++++++++++|.+++++
T Consensus 392 ~~-~~-----~~~~l~~~-~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 392 PS-QF-----EACFLSAA-HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred cC-Cc-----cceeeECC-CCHHHHHHHHHHHHHHHhh
Confidence 54 22 34788887 5899999999999998865
No 167
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.92 E-value=4.3e-23 Score=210.40 Aligned_cols=292 Identities=15% Similarity=0.214 Sum_probs=197.5
Q ss_pred HHHHHHHHHHH---HHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChhhhccc---CCCcEEE
Q 037587 87 PDAKKELVKLM---ARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGFDRDLKW---RPGVEIV 159 (464)
Q Consensus 87 ~~lr~~ia~~~---~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~---~~g~~~~ 159 (464)
..++++++++. .+.+| ++++++.+|+|+++++..++.++. .+||+|+++++.|+.+...+.. ..|++++
T Consensus 108 ~g~~~~~~e~~~~la~l~g----~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~ 183 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTG----MDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVV 183 (447)
T ss_pred hHHHHHHHHHHHHHHHHhC----CCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEE
Confidence 45666666443 55555 567789999999999999988874 7899999999999888766543 2389999
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEE--eccccccccC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVS--DEIYSGTVFD 237 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~--Deay~~~~~~ 237 (464)
.+++++ + .+|++++++.+.+ ++++|++++| ||||.+. ++++|.++|+++|+++|+ |.+.... +
T Consensus 184 ~v~~~~--~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~---~l~~I~~~a~~~~~~~iv~~d~~~~g~-~- 248 (447)
T PRK00451 184 EVPYED--G-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIE---DLEEIAEIAHAGGALFIVGVDPVSLGL-L- 248 (447)
T ss_pred EecCCC--C-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeC---CHHHHHHHHHHCCCEEEEEcChHHhcc-C-
Confidence 999874 3 7899999998854 7899999999 8999995 478888999999999888 4332110 1
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEc---CCCcCCCCCccEEEEEEecCHHHHHH-------------------
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVY---SLSKDFSMPGFRVGMIYSNNERVVSA------------------- 295 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~---S~SK~~g~~GlRiG~l~~~~~~~~~~------------------- 295 (464)
.. . . ..+..+++. +|||.+++.|+|+||++++++.+...
T Consensus 249 ~~----~------~---------~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 309 (447)
T PRK00451 249 KP----P------G---------EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVL 309 (447)
T ss_pred CC----c------c---------cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEe
Confidence 00 0 0 123344444 78888888899999998855433321
Q ss_pred --------HHHhcccCCCC--hHHH-HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEE-
Q 037587 296 --------ATKMSSFGLVS--SQTQ-YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCW- 362 (464)
Q Consensus 296 --------~~~~~~~~~~s--~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~- 362 (464)
.+........+ ...+ .++...+... ..+.+++.++++.++++++.+.|.++ |+++. .+++|.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~ 385 (447)
T PRK00451 310 TLQAREQHIRREKATSNICTNQALNALAAAIYMSLL--GPEGLRELAEQNHQKAHYLAERLAEIGGVELF--DGPFFNEF 385 (447)
T ss_pred eccccccccccccccccccccHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec--CCCeEEEE
Confidence 01111111111 1223 2222222211 13447788889999999999999988 67775 3444543
Q ss_pred -EecCcccccCChhHHHHHHHHHHHhcCeEE-eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 363 -VDMRHLLVSNTFEAEKELWKKIIFEVGLNI-SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 363 -~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v-~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
++++. ...+++++|++ +||.+ .++..|.+...+++|++++. .++++++++++.|++++
T Consensus 386 ~v~~~~--------~~~~~~~~L~~-~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 386 VVRLPK--------PAEEVNEALLE-KGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred EEecCC--------CHHHHHHHHHh-cCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 55431 12357777764 57663 45666654445789999974 68999999999998764
No 168
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.92 E-value=1.6e-22 Score=202.70 Aligned_cols=331 Identities=16% Similarity=0.119 Sum_probs=204.4
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.+..+. .....++- ..+....+++.+.+..
T Consensus 32 ~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~----------~~~~~~~~----~~~~~~~l~~~l~~~~-- 95 (396)
T PRK04073 32 VWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADK----------VTLTSRAF----HSDQLGPWYEKVAKLT-- 95 (396)
T ss_pred cEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhh----------cccccccc----CCHHHHHHHHHHHhcC--
Confidence 34444556778998654 2223 346666666554221 11111111 1233344444444321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC---------CC-CeEEEcCCCCCChhhhcccCCCcE------------EEEE
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD---------PG-DAFLLPTPYYPGFDRDLKWRPGVE------------IVPI 161 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v 161 (464)
..+.+++++++++++..+++.... +| ++|+..+-+|++....+....+.. +..+
T Consensus 96 ----~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (396)
T PRK04073 96 ----GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKI 171 (396)
T ss_pred ----CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEe
Confidence 236899999999999999887531 34 678888777776542221111211 1122
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHH-HHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQ-ELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~-~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+. .|++.+++.+.+ ++++|++..|+||||.+++.+ .+++|.++|+++|+++|+||+|.++...+.
T Consensus 172 ~~-------~d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~- 237 (396)
T PRK04073 172 PY-------GDLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK- 237 (396)
T ss_pred CC-------CCHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH-
Confidence 21 167888887753 678878877799999998765 699999999999999999999997433222
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~ 318 (464)
.+ . .+... .... +.+|||.+|.+|+|+||++++ +.+.+.+... ...+..+++.+.++.+.|+
T Consensus 238 -~~-~-~~~~~---------~~pd---i~~~sK~lg~gg~~ig~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 238 -LF-A-CDWDN---------VTPD---MYILGKALGGGVFPISCVAAN-RDILGVFTPGSHGSTFGGNPLACAVSIAALE 301 (396)
T ss_pred -HH-H-hhhcC---------CCCC---EEEecccccCCCCcceEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 11 1 11111 1122 346899999888999999995 4455544332 2223467888888888775
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG---IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g---~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
... + +...+..+++++++.+.|++++ +...++. |.|++++++. ...+++..++ ++||.+.+.
T Consensus 302 ~~~--~---~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~~~~~~--------~~~~~~~~l~-~~Gv~~~~~ 366 (396)
T PRK04073 302 VLE--E---EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIGVELNE--------PARPYCEALK-EEGLLCKET 366 (396)
T ss_pred HHH--h---cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEEEEecc--------hHHHHHHHHH-HCCeEEecC
Confidence 211 0 1122334455677777777653 3333445 4678888763 1235666665 679999763
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 396 SSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+++++||++.. .+++++++++++|++++
T Consensus 367 ------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 367 ------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 24689999754 68999999999999875
No 169
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=4e-22 Score=199.25 Aligned_cols=216 Identities=15% Similarity=0.220 Sum_probs=153.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----ccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~ 152 (464)
..+|+. .+..+|++++|++++ .+++++++|+++++..++.+++++||.|+++.|.|+.+... +..
T Consensus 58 Y~r~~~-p~~~~Le~~iA~~~g----------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 126 (400)
T PRK06234 58 YSRLGN-PTSTEVENKLALLEG----------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTR 126 (400)
T ss_pred ccCCCC-ccHHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhh
Confidence 344544 457999999999985 23578888888999999999999999999999999865543 344
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEecc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEI 230 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Dea 230 (464)
. |++++.++.. |++++++.+.+ ++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++
T Consensus 127 ~-G~~v~~vd~~-------d~e~l~~~i~~------~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea 189 (400)
T PRK06234 127 Y-GVEVTFVDTS-------NLEEVRNALKA------NTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNT 189 (400)
T ss_pred C-CeEEEEECCC-------CHHHHHHHhcc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECC
Confidence 5 9999888753 68899888865 7899999999999999986 66677777776 899999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHh--ccc--CCC
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKM--SSF--GLV 305 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~--~~~--~~~ 305 (464)
|....+. . . ... +..+++.|+||.++.+|.|+ ||++++++ +.+.++.. ... ...
T Consensus 190 ~~~~~~~-~-----~-l~~-------------g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~~~l~~~~~~~~~g~~l 248 (400)
T PRK06234 190 FCTPYIQ-R-----P-LQL-------------GADVVVHSATKYLNGHGDVIAGFVVGKEE-FINQVKLFGIKDMTGSVI 248 (400)
T ss_pred CCchhcC-C-----c-hhh-------------CCcEEEeeccccccCCCCceeEEEEecHH-HHHHHHHHHHHHhcCCCC
Confidence 9854332 1 1 111 45588999999998889775 99998654 44444321 111 234
Q ss_pred ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 306 SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 306 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
++.....+..-++. +..+.++..+....+.+.|+++
T Consensus 249 ~p~~a~l~~~~l~t-------l~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 249 GPFEAFLIIRGMKT-------LQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred CHHHHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 55555544444443 2233344445666677777765
No 170
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.91 E-value=1.1e-21 Score=195.78 Aligned_cols=314 Identities=11% Similarity=0.130 Sum_probs=198.7
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEE
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIV 159 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~ 159 (464)
|+...++.+|++++|++++ ..+.+++++|.++.. .++.+++++||.|+++++.|..+...+... +.+++
T Consensus 39 yg~~~~~~~LE~~lA~~~g---------~e~al~~~sG~~a~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~-~~~~~ 107 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLG---------TESAILYSDGASTTS-STVAAFAKRGDLLVVDRGVNEALLVGVSLS-RANVR 107 (392)
T ss_pred cCChHHHHHHHHHHHHHhC---------CCcEEEecCcHHHHH-HHHHHhCCCCCEEEEeccccHHHHHHHHHc-CCeEE
Confidence 7666678999999999986 246788888877777 666778999999999999999887776554 77777
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhh--------cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQT--------LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~--------~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.++.. |.+.+++.++.... ..+++++|++.+|.||+|.+.+ ++++.++|+++|+++|+||+|
T Consensus 108 ~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~ 177 (392)
T PLN03227 108 WFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESF 177 (392)
T ss_pred EeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECcc
Confidence 66543 34455554433221 1236788888889999999988 667889999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc---ccCC-CCh
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS---SFGL-VSS 307 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~---~~~~-~s~ 307 (464)
.-..++..+ ....+... .. ...+..+++.|+||.+|.. .|+++++ +.+.+.++... .++. .++
T Consensus 178 ~~g~~g~~G---~g~~~~~g-~~-----p~~~~Div~~slsk~~g~~---gg~v~~~-~~~~~~~~~~~~~~~~~~~~~p 244 (392)
T PLN03227 178 SFGTLGKSG---RGSLEHAG-LK-----PMVHAEIVTFSLENAFGSV---GGMTVGS-EEVVDHQRLSGSGYCFSASAPP 244 (392)
T ss_pred cccccCCCC---CcHHHHcC-CC-----CCCCceEEEeechhhhhcc---CcEEecC-HHHHHHHHHhCcCccccCCCCH
Confidence 722122211 12222211 00 0124578889999987644 4888874 44444443322 2222 234
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee----------cCCccEEEEEecCcccccCCh---
Q 037587 308 QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL----------KSNAGLFCWVDMRHLLVSNTF--- 374 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~----------~~~~g~f~~~~l~~~~~~~~~--- 374 (464)
..+.++...+.... . .++.++.++++.+++.+.|++.+++.. ....++++.+.+.........
T Consensus 245 ~~~~aa~~al~~~~--~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 320 (392)
T PLN03227 245 FLAKADATATAGEL--A--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDET 320 (392)
T ss_pred HHHHHHHHHHHHHh--c--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhh
Confidence 45555544443211 0 234566677788888888876443311 112244666777432111000
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCC-----CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 375 EAEKELWKKIIFEVGLNISPGSS-----CHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~-----f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
....+++..++ ++||.+.+... +....+..+|++++. .++|++++++++|++++++.
T Consensus 321 ~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 321 LILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred hHHHHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 01124666654 67999975321 111225679999987 89999999999999998765
No 171
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.91 E-value=5e-22 Score=197.03 Aligned_cols=218 Identities=18% Similarity=0.186 Sum_probs=156.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc---C
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW---R 153 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~ 153 (464)
..+|+.+. ..+|++++|++.+ .+++++|+|+++++..++.+++++||.|+++.|+|++....+.. .
T Consensus 45 Y~R~~~p~-~~~le~~lA~l~g----------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~ 113 (382)
T TIGR02080 45 YSRSGNPT-RDLLQQALAELEG----------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKK 113 (382)
T ss_pred ccCCCCch-HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 45676543 5889999999874 35799999999999999999999999999999999865543322 2
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
.|+++..++. .|++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|..
T Consensus 114 ~~~~v~~~d~-------~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~ 177 (382)
T TIGR02080 114 GCFRVLFVDQ-------GDEQALRAALAQ------KPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLS 177 (382)
T ss_pred cCeEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 1455554431 368888888764 7899999999999999987 55677888899999999999975
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhccc--CCCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q 310 (464)
..+. . ++ .+ +..++++|+||.++ .+|++.|++++.++.+.+.+...... ..++++.+
T Consensus 178 ~~~~-~-----pl-~~-------------gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a 237 (382)
T TIGR02080 178 PALQ-N-----PL-AL-------------GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDS 237 (382)
T ss_pred cccC-C-----ch-hh-------------CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHH
Confidence 3221 1 11 11 23478899999985 57899999988666666655544333 23556655
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
..+..-++ .+..+.++..++...+.+.|+.+
T Consensus 238 ~l~lr~l~-------tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 238 YLTLRGLR-------TLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHcccc-------hHHHHHHHHHHHHHHHHHHHHhC
Confidence 55433333 23344555667777788888876
No 172
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.91 E-value=2.6e-21 Score=195.53 Aligned_cols=359 Identities=12% Similarity=0.065 Sum_probs=213.4
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+ ...+ ..+.+.+++.+..+. .. ..+....+.+ ....+|+++....+
T Consensus 34 ~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~----------~~--~~~~~~~~~~-~~~~la~~l~~~~~-- 98 (425)
T PRK08088 34 RVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK----------LS--HTCFQVLAYE-PYLELCEKMNQKVP-- 98 (425)
T ss_pred EEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhh----------CC--CccccccCCH-HHHHHHHHHHHhCC--
Confidence 4444556678898764 2223 346666666654221 01 1111112223 34578887765433
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhcccCCCc---------------EEEEEecCCC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLKWRPGV---------------EIVPIHCSSS 166 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~~~g~---------------~~~~v~~~~~ 166 (464)
.+.. +.+++++++++++..+++. +.++ ..|+...++|++....+....+. ...++|.+.
T Consensus 99 ~~~~-~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~- 175 (425)
T PRK08088 99 GDFA-KKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL- 175 (425)
T ss_pred CCCC-CEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-
Confidence 1111 3566666666766665554 3333 45666699998876443322110 111122111
Q ss_pred CCccc--CHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 167 NGFRI--TISALENAYQQAQTLNLKVKGVLITNP--SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 167 ~~~~~--d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.+... +++.+++.+.+. ....++.+|++ .| +++++...+.+.+++|.++|+++|+++|+||+|.++.+.+.
T Consensus 176 ~~~~~~~~~~~l~~~l~~~-~~~~~~aavi~-Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~--- 250 (425)
T PRK08088 176 HGVSEDDAIASIERIFKND-AAPEDIAAIII-EPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT--- 250 (425)
T ss_pred cCccHHHHHHHHHHHHHhc-cCCCceEEEEE-CcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc---
Confidence 11111 144566666421 11235665554 45 78877888999999999999999999999999997433222
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~ 320 (464)
..++. . .+.+..+.||||.++ +|+|+||++++.+ +.+.+.... ..+..+++.|.++..+++..
T Consensus 251 ~~~~~-~------------~~~~pdi~s~sK~l~-~G~rig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~ 315 (425)
T PRK08088 251 LFAME-Q------------MGVAADLTTFAKSIA-GGFPLAGVTGRAE-VMDAIAPGGLGGTYAGNPIACAAALAVLKVF 315 (425)
T ss_pred hhHHh-h------------cCCCCCEEEEecccc-CCCcceeeEecHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 11111 1 123344789999998 9999999999544 444443222 22346789999999998865
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIR-CLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISPGSS 397 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~pg~~ 397 (464)
.. ++++++.++..+.+++.+.+.+.+.+.. ...+. |+++|+.+...... +......+++..++ ++||.+.|+..
T Consensus 316 ~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~ 392 (425)
T PRK08088 316 EQ-ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGP 392 (425)
T ss_pred Hh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCC
Confidence 44 4556666666555555555554555431 12222 78999999532211 11122345666665 67999988655
Q ss_pred CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 398 CHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 398 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
| .+.+|++++. .+++++++++++|++++++.
T Consensus 393 ~----~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 393 Y----YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred C----CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 4 3679999985 78999999999999998764
No 173
>PRK07505 hypothetical protein; Provisional
Probab=99.90 E-value=1e-20 Score=190.17 Aligned_cols=339 Identities=12% Similarity=0.096 Sum_probs=192.6
Q ss_pred CCCCCceEEeeccccccc---HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 32 LHNPSGIIQMGLAENQLS---FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 32 ~~~~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
+.+...+|||+.+ +.+. .|.+.+++.+..... .. .........+. .....++++.|+++++ .
T Consensus 42 d~~g~~~ld~~s~-~~lgl~~~p~v~~A~~~~l~~~--g~--~~~~~~~~~~~-~~~~~~l~~~la~~~~--------~- 106 (402)
T PRK07505 42 LADGHTFVNFVSC-SYLGLDTHPAIIEGAVDALKRT--GS--LHLSSSRTRVR-SQILKDLEEALSELFG--------A- 106 (402)
T ss_pred ecCCceEEEeecC-CccCCCCCHHHHHHHHHHHHHh--CC--CCCCccchhhh-hHHHHHHHHHHHHHhC--------C-
Confidence 3345668999875 3443 566777766643210 00 00000000011 1123455666665543 2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----CCCC-eEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLA----DPGD-AFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~----~~gd-~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
..+++++++++...++..+. .+|+ .|++.+..|++... ..... +.+++.+|. .|++.+++.+
T Consensus 107 --~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~-~~~v~~~~~-------~d~~~l~~~~ 176 (402)
T PRK07505 107 --SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICAD-ETEVETIDH-------NDLDALEDIC 176 (402)
T ss_pred --CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhc-CCeEEEeCC-------CCHHHHHHHH
Confidence 34544455667776665432 2232 36666666543321 11222 456666664 3788898877
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
.+ +.+++++++|+||||.+++ +++|.++|+++++++|+||+|+...|+..... .. ...... .
T Consensus 177 ~~------~~~~~vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~-~~-~~~~~~-------~ 238 (402)
T PRK07505 177 KT------NKTVAYVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEG-YV-RSELDY-------R 238 (402)
T ss_pred hc------CCCEEEEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCc-hH-HHHcCC-------C
Confidence 54 5678999999999999988 56677888899999999999964444432111 11 111110 0
Q ss_pred CCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC----CCChHHHHHHHHHcC--CchhhHHHHHHHHHHH
Q 037587 261 LWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG----LVSSQTQYLLSRMLS--DKKFTCNYMKENRKRL 334 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----~~s~~~q~~~~~~l~--~~~~~~~~~~~~~~~~ 334 (464)
.++++++++||||+||.+| ||++++++.+.+.+......+ ++++++..++.+.++ ..+. +.+.++.+
T Consensus 239 ~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~----~~~~~~~l 311 (402)
T PRK07505 239 LNERTIIAASLGKAFGASG---GVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEE----LDQLQQKL 311 (402)
T ss_pred CCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccC----cHHHHHHH
Confidence 2477899999999999776 888765666666665543332 234456666655554 2222 33344445
Q ss_pred HHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-
Q 037587 335 RKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN- 412 (464)
Q Consensus 335 ~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~- 412 (464)
+++.+.+...+.. .+ ...+-++.++.++.. ....++...|+ ++||.|+++..+.. .+.+++||+++.
T Consensus 312 ~~~~~~~~~~~~~---~~-~g~~~~i~~~~~~~~------~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~ 380 (402)
T PRK07505 312 QNNIALFDSLIPT---EQ-SGSFLPIRLIYIGDE------DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRAS 380 (402)
T ss_pred HHHHHHHHHHHHh---cC-CCCCCCEEEEEeCCH------HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCcc
Confidence 5554443332211 11 111212223333210 12235677776 67999998743321 123689999986
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 037587 413 ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 413 ~~~e~l~~~l~~l~~~l~~ 431 (464)
.+++++++++++|++++++
T Consensus 381 ~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 381 HTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6899999999999998865
No 174
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=1.7e-21 Score=194.08 Aligned_cols=290 Identities=15% Similarity=0.157 Sum_probs=188.8
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC---
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR--- 153 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--- 153 (464)
..+|+++. ..+|++.+|++++ ..+.+++ ++++.++..++.+++++||.|+++.|.|+.....+...
T Consensus 55 y~r~~~pt-~~~Le~~lA~l~G---------~~~al~~-~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~ 123 (386)
T PRK06767 55 YSRLGNPT-VKLFEERMAVLEG---------GEEALAF-GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEK 123 (386)
T ss_pred ccCCCCcc-hHHHHHHHHHHhC---------CCcEEEE-CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhh
Confidence 45566543 5889999999986 2344555 45567899999999999999999999887665543221
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
.|+++..++. .|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.
T Consensus 124 ~gi~~~~~~~-------~d~~~l~~~i~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~ 187 (386)
T PRK06767 124 FMITHSFCDM-------ETEADIENKIRP------NTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCS 187 (386)
T ss_pred cCeEEEEeCC-------CCHHHHHHhhCc------CceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 2555554432 367888888754 7899999999999999987 56777788899999999999974
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcc-c-CCCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSS-F-GLVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~-~-~~~s~~~q 310 (464)
..+. . + + ..+..+++.|+||.++.+|.|+ ||++++++.+.+..+.... . ..++++.+
T Consensus 188 ~~~~-~-----p---l-----------~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a 247 (386)
T PRK06767 188 PYLQ-R-----P---L-----------ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDA 247 (386)
T ss_pred cccC-C-----c---h-----------hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHH
Confidence 2221 1 1 1 0133477889999998788885 8999866655544333222 2 23455555
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eec-----------CCccEEEEEecCcccccCChhHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-CLK-----------SNAGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~-----------~~~g~f~~~~l~~~~~~~~~~~~ 377 (464)
.++...++. +..+.++..++...+.+.|+++ ++. +.- ..+| .+.+++... ....
T Consensus 248 ~l~~~~L~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg-~vsf~l~~~-----~~~~ 314 (386)
T PRK06767 248 WLLLRGLKT-------LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGG-VISFSIKGG-----KEET 314 (386)
T ss_pred HHHHcCCCc-------HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCc-eEEEEEcCC-----HHHH
Confidence 554444432 3344556677888889999887 664 331 2344 555666521 1223
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 378 KELWKKIIFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+++..+ +..++.+.-|..... -.++.+|+|++. |+.+.+++-|.+++.
T Consensus 315 ~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~ 384 (386)
T PRK06767 315 QAFINDL-HFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALK 384 (386)
T ss_pred HHHHHhC-CccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 3455554 455666654433221 014689999995 446666666666664
No 175
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=2.2e-21 Score=193.28 Aligned_cols=333 Identities=11% Similarity=0.105 Sum_probs=216.2
Q ss_pred CCCCCCCCCceEEeecccc--ccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 28 PYDQLHNPSGIIQMGLAEN--QLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
.|..+.....+||+..+.. .++ .|.+.+++.+.. .....++. ....++++.+++.+..
T Consensus 21 ~~l~d~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~-------------~~~~~~~~-~~~~~~~~~la~~l~~----- 81 (375)
T PRK04260 21 NYLIDTDGKKYLDFSSGIGVTNLGFHPQVQQALQKQA-------------GLIWHSPN-LYLNSLQEEVAQKLIG----- 81 (375)
T ss_pred CEEEeCCCCEEEECCCCcccccCCCCHHHHHHHHHHH-------------HhcCcccC-ccCCHHHHHHHHHHhc-----
Confidence 3444445667899976522 222 344666665542 12222322 2347888999988741
Q ss_pred CCCCCC-cEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChh-hhcccCCCcEE---------EEEecCCCCCccc
Q 037587 105 VKFDPN-KLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFD-RDLKWRPGVEI---------VPIHCSSSNGFRI 171 (464)
Q Consensus 105 ~~~~~~-~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~-~~~~~~~g~~~---------~~v~~~~~~~~~~ 171 (464)
.++ .+++++++++++..+++... .++++|++.+.+|++.. ..+... |.+. ..++.. . ..
T Consensus 82 ---~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~ 153 (375)
T PRK04260 82 ---DKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSAT-GQDKIKDGFGDGVPHFSYA---I-FN 153 (375)
T ss_pred ---CcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhcc-CCcccCCCCCCCCCCeEEe---C-CC
Confidence 233 46889999999998887752 34678999888887643 222111 2111 111110 0 13
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhh
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAV 250 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~ 250 (464)
|++.+++.+.+ ++.+|++..++|++|... +.+.++++.++|+++|+++|+||+|.++...+. .... ...
T Consensus 154 dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~---~~~~-~~~ 223 (375)
T PRK04260 154 DLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK---LYAF-EHY 223 (375)
T ss_pred CHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc---hhhh-Hhh
Confidence 78888887643 677888888899999875 457799999999999999999999986422221 1111 111
Q ss_pred hccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHHHH
Q 037587 251 MDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNYMK 328 (464)
Q Consensus 251 ~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 328 (464)
.. . +. +.||||.++ +|+|+||++++++ +.+.+.. ....+..+++.+.++.++++.... .++.+
T Consensus 224 -~~-------~-pd---i~t~sK~l~-~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~ 288 (375)
T PRK04260 224 -GI-------E-PD---IFTLAKGLA-NGVPVGAMLAKSS-LGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLE 288 (375)
T ss_pred -CC-------C-CC---EEEeccccc-CCcceEEEEEcHH-HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHH
Confidence 11 1 22 349999998 8999999999644 4444432 122234578889988888865443 45567
Q ss_pred HHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 037587 329 ENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFR 407 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 407 (464)
+.++..+..++.+.+.+.+++ +...+ ..|+++|++++.. ..++...+. ++||.+.|+ +.+.+|
T Consensus 289 ~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~--------~~~~~~~l~-~~Gi~v~~~------~~~~lR 352 (375)
T PRK04260 289 QALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD--------LSQLVEAAR-DKGLIVLTA------GTNVIR 352 (375)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc--------HHHHHHHHH-hCCCEEecC------CCCEEE
Confidence 777777788888888777764 23333 3678999998421 124666654 679999875 246799
Q ss_pred EEeec-CCHHHHHHHHHHHHHH
Q 037587 408 ICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 408 is~~~-~~~e~l~~~l~~l~~~ 428 (464)
+++.. ++++++++++++|+++
T Consensus 353 ~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 353 LLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EcCCCccCHHHHHHHHHHHHHh
Confidence 99954 8999999999999875
No 176
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=1.3e-21 Score=193.31 Aligned_cols=287 Identities=13% Similarity=0.160 Sum_probs=187.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC---------------eEEEcCCCCCChh--
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGD---------------AFLLPTPYYPGFD-- 147 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd---------------~Vlv~~p~y~~~~-- 147 (464)
+..++++++++++.+.+| .+++++|+|+++++.+++.+++++|| .|+++.|.|..|.
T Consensus 42 ~~~~~~~~~~~~~a~~~g------~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~ 115 (363)
T TIGR01437 42 EIKELVNKTGEYIANLLG------VEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAP 115 (363)
T ss_pred CHHHHHHHHHHHHHHhhC------CCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCc
Confidence 457888888888887655 34789999999999999999999998 9999998887652
Q ss_pred --hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE-EeCCCCCCCCCCCHHHHHHHHHHHhhCCeE
Q 037587 148 --RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL-ITNPSNPLGTAMTHQELNHLINFSKSKRIH 224 (464)
Q Consensus 148 --~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi-l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~ 224 (464)
..+... |++++.++.+ +.+|++++++++.+ ++++++ +++|+||+|.+.+ +++|.++|+++|++
T Consensus 116 ~~~~~~~~-g~~~v~v~~~----~~~d~~~le~ai~~------~t~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~ 181 (363)
T TIGR01437 116 VETMVRLG-GGKVVEAGYA----NECSAEQLEAAITE------KTAAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLP 181 (363)
T ss_pred hHHHHHhc-CCeEEEEcCC----CCCCHHHHHHhcCh------hceEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCe
Confidence 344445 9999888753 45899999999875 777765 5788999999887 45688899999999
Q ss_pred EEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--
Q 037587 225 IVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF-- 302 (464)
Q Consensus 225 lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~-- 302 (464)
+|+|++|.. . ......+ +..+++.|++|.+ .|++.|+++++++.+ +..+.....
T Consensus 182 vivD~a~~~---~-----~~~~~~~-------------g~D~~~~S~~K~l--~gp~~G~l~~~~~~i-~~~~~~~~~~~ 237 (363)
T TIGR01437 182 LIVDAAAEE---D-----LQKYYRL-------------GADLVIYSGAKAI--EGPTSGLVLGKKKYI-EWVKLQSKGIG 237 (363)
T ss_pred EEEECCCCC---c-----hHHHHHc-------------CCCEEEEeCCccc--CCCceEEEEEcHHHH-HHHHhccCCCc
Confidence 999999971 1 1111111 2346778999976 677899999854433 333222111
Q ss_pred -----CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--CccE-E--EEEecCccccc
Q 037587 303 -----GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS--NAGL-F--CWVDMRHLLVS 371 (464)
Q Consensus 303 -----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~-f--~~~~l~~~~~~ 371 (464)
+..+..++.++...+... ..+..+.+.++++.+.+.|.+. |+.+... ..+. + .-+.+... .
T Consensus 238 ~~~~~~~~~~~gl~aAl~~~~~~------~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~--~ 309 (363)
T TIGR01437 238 RAMKVGKENILGLTAALEQYLST------GKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES--E 309 (363)
T ss_pred ceeccCHHHHHHHHHHHHHHHcc------CcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc--C
Confidence 111112333333222221 1122333344566788889887 8877632 1111 0 11222210 0
Q ss_pred CChhHHHHHHHHHHHhcC--eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 372 NTFEAEKELWKKIIFEVG--LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 372 ~~~~~~~~l~~~ll~~~g--I~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
... ...++.+.| +++| |.+++ .| ...+.+|+++...+++|++.++++|++++
T Consensus 310 ~g~-~~~~l~~~L-~~~~~~I~~r~--~~--~~~~~~~l~~~~~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 310 LGM-TAADVVQAL-RQGEPAIYTRG--YK--ANEGIIEIDPRSVTGGQLDIIVERIREIV 363 (363)
T ss_pred CCC-CHHHHHHHH-hcCCCCEEEee--ee--ecCCeEEEEeecCCHHHHHHHHHHHHHhC
Confidence 011 122455555 5566 66665 22 24678999998888999999999998763
No 177
>PRK06460 hypothetical protein; Provisional
Probab=99.90 E-value=9.3e-22 Score=195.01 Aligned_cols=211 Identities=18% Similarity=0.166 Sum_probs=145.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----hhhhcccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG----FDRDLKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~~g~~~~~ 160 (464)
...+|++++|++.+ .+ ..+++ +++++++..++.+++++||+|+++.|.|++ +...++.. |+++..
T Consensus 46 ~~~~L~~~lA~l~g--------~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~-G~~v~~ 114 (376)
T PRK06460 46 TVLELTKKIVELEN--------AE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNW-GVNVDA 114 (376)
T ss_pred cHHHHHHHHHHHhC--------CC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhh-CcEEEE
Confidence 56899999999986 32 34555 444689999999999999999999876643 34455555 999888
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+ +.+.+++.+. +++++|++++|+||||.+++.+ +|+++|+++|+++|+||+|+.. +..
T Consensus 115 ~~~~-------~~~~l~~~~~------~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~-~~~-- 175 (376)
T PRK06460 115 SNPG-------SDNIIEKAKS------KRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTP-INQ-- 175 (376)
T ss_pred ECCC-------CHHHHHHhcC------CCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCcc-ccC--
Confidence 7753 1223333222 3789999999999999999865 5777888999999999999742 111
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~ 319 (464)
.+ + ..+.+++++|+||.++ ..+.|+||++++ +.+.+.+++....+..+.. ...+..+++.
T Consensus 176 ---~~---l-----------~~~~divv~S~sK~l~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~-~~~a~~~l~~ 236 (376)
T PRK06460 176 ---KP---L-----------ELGADIVVHSASKFLAGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLD-PHAAYLTLRG 236 (376)
T ss_pred ---Ch---h-----------hcCCCEEEeecceeccCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCC-HHHHHHHHhc
Confidence 11 1 1145688999999985 234789999985 4455555544433333221 1233344444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+ +++.+++.+.+++..+.+.|+++
T Consensus 237 ~~----~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 237 IK----TLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred hh----hHHHHHHHHHHHHHHHHHHHHcC
Confidence 33 46677778888999999999876
No 178
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=6.8e-24 Score=180.78 Aligned_cols=145 Identities=57% Similarity=1.042 Sum_probs=125.7
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcc-ccccccccc
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNG-ESLFRELAL 79 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (464)
+||+++.++.|.+++.||..|+.+..++|++..||.|+|+|+++||.+..+.+..++.+.++....++.+ ...+.++..
T Consensus 8 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a~ 87 (153)
T PLN02994 8 LLSKLALADKHGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDIAL 87 (153)
T ss_pred hhhhhcccccCCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999999999998854322222111 111233466
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG 145 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~ 145 (464)
|+++.|.++||+++|+|++++++..+++++++|++|+|+++++..+++++++|||.|++++|+|++
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 999999999999999999998886667889999999999999999999999999999999999973
No 179
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=3.3e-21 Score=191.33 Aligned_cols=218 Identities=18% Similarity=0.209 Sum_probs=159.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---cC
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---WR 153 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~ 153 (464)
..+|+++. ...|++++|++.+ .+.+++++|+++++..++.+++++||+|++++|+|++....+. ..
T Consensus 46 Y~R~~~pt-~~~L~~~lA~l~g----------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 114 (386)
T PRK08045 46 YSRRGNPT-RDVVQRALAELEG----------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKR 114 (386)
T ss_pred eeCCCCcc-HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhh
Confidence 56677653 5889999999875 2369999999999999999999999999999999986443322 12
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
.|+++..++ ..|++.+++.+.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..
T Consensus 115 ~gi~v~~vd-------~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~ 178 (386)
T PRK08045 115 GCYRVLFVD-------QGDEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLS 178 (386)
T ss_pred CCeEEEEeC-------CCCHHHHHHhccc------CCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCc
Confidence 245665553 1478888888754 7899999999999999987 55677778899999999999975
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhccc--CCCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q 310 (464)
... .. ++ .+ ...++++|++|.++ .++++.|++++.++.+.+.+...... ...+++.+
T Consensus 179 ~~~-~~-----pl-~~-------------gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~ 238 (386)
T PRK08045 179 PAL-QN-----PL-AL-------------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDS 238 (386)
T ss_pred ccc-CC-----ch-hh-------------CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHH
Confidence 322 11 11 11 22378999999984 66788999988656555544432222 24677888
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.++...|+. +..++++..++...+.+.|+.+
T Consensus 239 ~l~~rgl~t-------l~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 239 YLLLRGLRT-------LVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHhhhcc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 877777765 4555666677778888888876
No 180
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=6.3e-21 Score=185.45 Aligned_cols=299 Identities=17% Similarity=0.147 Sum_probs=207.3
Q ss_pred CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 83 YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 83 ~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
..-+.+|.+.||+|++ .+..++.+++-.++..++.+|++++|.|+...-.|.+....++.. +++++.+.
T Consensus 83 ~~~h~~LE~~lA~f~g----------~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls-~a~~~~f~ 151 (388)
T COG0156 83 SDLHVELEEELADFLG----------AEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLS-RAEVRRFK 151 (388)
T ss_pred cHHHHHHHHHHHHHhC----------CCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhC-CCcEEEec
Confidence 3345789999999986 334555566666777888999999999999999999998888876 88888876
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
- .|++.|++.+++....+.+.++|++...-...|.+.| +++|++++++|+.++++||+|+-..+++.+
T Consensus 152 H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~G-- 219 (388)
T COG0156 152 H-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNG-- 219 (388)
T ss_pred C-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCC--
Confidence 2 4789999999875433223555666666778898855 777888999999999999999977776542
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-hcccCC---CChHHHHHHHHHcC
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-MSSFGL---VSSQTQYLLSRMLS 318 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-~~~~~~---~s~~~q~~~~~~l~ 318 (464)
..+.+... + ...+..|+++||||+||..| ||+.++ ..+.+.+.. .+++.. .++...+++...++
T Consensus 220 -rG~~e~~g-~------~~~~vdi~~gTlsKAlGs~G---g~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~ 287 (388)
T COG0156 220 -RGLAEHFG-L------EPEEVDIIVGTLGKALGSSG---GYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALR 287 (388)
T ss_pred -ccHHHHhC-C------CCccceEEEEEchhhhcccC---ceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHH
Confidence 22222221 1 02356899999999999888 999985 445555544 344431 23333333334443
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
.. +...+.++.++++...+.+.+...|+.+.++.+. ++.+-+... ....++...++++ ||.+.+....
T Consensus 288 ~l----~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s~s~-I~pv~~gd~------~~a~~~s~~l~~~-Gi~v~~i~~P 355 (388)
T COG0156 288 IL----EEGPERRERLQELAAFFRSLLKALGLVLLPSESP-IIPVILGDE------ERALEASRALLEE-GIYVSAIRPP 355 (388)
T ss_pred HH----HhCHHHHHHHHHHHHHHHHHHHhcCCccCCCCCC-eeeeEeCCH------HHHHHHHHHHHHC-CeeEeeecCC
Confidence 21 2234567777778778887777778877666664 665555532 2234566777765 9999866544
Q ss_pred CC-CCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 399 HC-NEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 399 ~~-~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
.- .+...+|++++. .++++++.+++.|.++
T Consensus 356 TVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 356 TVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 32 334679999987 8999999999998764
No 181
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=8.2e-21 Score=190.80 Aligned_cols=345 Identities=13% Similarity=0.093 Sum_probs=213.2
Q ss_pred CCCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+. .|.+.+++.++.. ....+... ...+....+++.+.+..
T Consensus 31 ~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~-------------~~~~~~~~-~~~~~~~~la~~l~~~~-- 94 (406)
T PRK12381 31 SRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQAS-------------KFWHTGNG-YTNEPVLRLAKKLIDAT-- 94 (406)
T ss_pred CEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHh-------------hcccccCc-cCCHHHHHHHHHHHhhC--
Confidence 35555566778998763 33443 4666666665421 11111111 11333344555554321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChhhhcccCCCcEEEE---EecCC--CCCcc
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA--------DPGDAFLLPTPYYPGFDRDLKWRPGVEIVP---IHCSS--SNGFR 170 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~---v~~~~--~~~~~ 170 (464)
..+.+++++++++++..+++... .+...|+..+.+|++....+....+..... .++.+ ..-..
T Consensus 95 ----~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (406)
T PRK12381 95 ----FADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY 170 (406)
T ss_pred ----CCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC
Confidence 24689999999999999998742 134689999999988754332221211100 00000 00011
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC--CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM--THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~--s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
.|++.+++.+.+ ++++|++ +|.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+.+. . ... .
T Consensus 171 ~d~~~l~~~l~~------~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~--~-~~~-~ 239 (406)
T PRK12381 171 NDLNSASALIDD------QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE--L-YAY-M 239 (406)
T ss_pred CCHHHHHHhccC------CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc--h-hhh-H
Confidence 367888887753 6766666 7999998765 689999999999999999999999977533332 1 111 1
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHH
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNY 326 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~ 326 (464)
.. +. . +. +.||||.+| +|+|+||++++ +.+.+.+.... ..+..+++.+.++.+.|+.- .
T Consensus 240 ~~-~v-------~-pD---i~t~sK~l~-gG~~ig~~~~~-~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l---~-- 300 (406)
T PRK12381 240 HY-GV-------T-PD---VLTTAKALG-GGFPIGAMLTT-EKCASVMTVGTHGTTYGGNPLASAVAGKVLELI---N-- 300 (406)
T ss_pred hh-CC-------C-CC---EEEehhhhh-CCCceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH---h--
Confidence 11 11 1 12 359999998 99999999995 44555443321 22345778888877765421 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC--Ce--eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 037587 327 MKENRKRLRKRKEMLVSGLKVAG--IR--CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE 402 (464)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~~g--~~--~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~ 402 (464)
....++.++++.+++.+.|++++ .. ......|+++++.++.... .....+...+ .++||.+.++ +
T Consensus 301 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~----~~~~~~~~~l-~~~Gv~v~~~------g 369 (406)
T PRK12381 301 TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA----GKAKQISQEA-AKAGVMVLIA------G 369 (406)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh----hHHHHHHHHH-HHCCcEEeeC------C
Confidence 12345666667777777777653 22 1223457888998864210 1122355544 5789999754 2
Q ss_pred CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 403 PGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 403 ~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++++|++++. ++++++++++++|++++++..
T Consensus 370 ~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 370 PNVVRFAPALNISEEEITTGLDRFARACERFV 401 (406)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 4589999976 799999999999999997654
No 182
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=8.9e-21 Score=187.48 Aligned_cols=280 Identities=14% Similarity=0.133 Sum_probs=182.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----cc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~ 152 (464)
..+|+.+ ...+|++++|++. ..+ .++++++++++..++.+++++||+|+++.|+|+.+...+ ..
T Consensus 45 y~ry~~p-~~~~Le~~lA~l~----------~~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~ 112 (366)
T PRK07582 45 YGRASNP-TWRALEAALGELE----------GAE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAP 112 (366)
T ss_pred eECCCCc-cHHHHHHHHHHHc----------CCC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhc
Confidence 5667654 5699999999985 134 445555567999999999999999999999998876543 33
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++.+.. + + .+. +++++|++++|+||||.+. ++++|+++|+++|+++|+|++|.
T Consensus 113 ~-G~~v~~v~~~~~--~----~----~~~------~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~ 172 (366)
T PRK07582 113 L-GVTVREAPTAGM--A----E----AAL------AGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTA 172 (366)
T ss_pred C-eEEEEEECCCCh--H----H----Hhc------cCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCC
Confidence 4 999999886421 1 1 111 2788999999999999875 57888999999999999999996
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHhccc--CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~ 309 (464)
.. +... ++ .+ +..++++|+||.+ |.+|+|+||++++++.+.+.+.....+ ...+++.
T Consensus 173 ~~-~~~~-----p~-~~-------------g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~ 232 (366)
T PRK07582 173 TP-LGQR-----PL-EL-------------GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFE 232 (366)
T ss_pred Cc-cccC-----ch-hc-------------CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 31 2211 11 12 2337889999998 456899999998666666655544333 2345666
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eee----c--C-----------CccEEEEEecCcccc
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCL----K--S-----------NAGLFCWVDMRHLLV 370 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~----~--~-----------~~g~f~~~~l~~~~~ 370 (464)
...+...++.. ..+.++..++...+.+.|+++ .+ .|. + | .+| .+.+++..
T Consensus 233 a~l~~r~l~tl-------~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg-~~s~~~~~--- 301 (366)
T PRK07582 233 AWLAHRSLGTL-------GLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGG-LVSFELAD--- 301 (366)
T ss_pred HHHHHhccccH-------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcc-eEEEEeCC---
Confidence 66666666542 233345556777788888876 33 222 1 1 345 55566641
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCC--------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHC--------------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
. +.+.++++..++... +.++|. ..++.+|+|++. |+.+.+++.|.++++
T Consensus 302 ~-------~~~~~~~~~l~~~~~-~~s~G~~~sl~~~~~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~ 364 (366)
T PRK07582 302 A-------AAAERFVAASRLVVA-ATSFGGVHTSADRRARWGDAVPEGFVRLSCGI---EDTDDLVADLERALD 364 (366)
T ss_pred H-------HHHHHHHHhCCccee-cccCCCccchhhhHHHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 0 123455566665542 222221 124679999996 334555555555554
No 183
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1e-20 Score=188.90 Aligned_cols=216 Identities=17% Similarity=0.172 Sum_probs=152.4
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----hhhhcccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG----FDRDLKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~ 153 (464)
.+|+++. ...|++.+|++.+ .++++++++ +++++.+++.+++++||.|+++.|+|+. +...+...
T Consensus 55 ~R~~~p~-~~~Le~~lA~l~g---------~~~~v~~~s-G~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 55 TRSGNPT-RDLLGEALAELEG---------GAGGVITAT-GMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred cCCCChH-HHHHHHHHHHHhC---------CCceEEEcC-HHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhc
Confidence 3444332 3677777877764 245555555 5799999999999999999999999987 33334444
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|.+++.++. .|++.+++.+++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|..
T Consensus 124 -g~~v~~v~~-------~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~ 186 (405)
T PRK08776 124 -HFALITADL-------TDPRSLADALAQ------SPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLS 186 (405)
T ss_pred -CcEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcc
Confidence 888888764 267888887754 789999999999999985 578889999999999999999974
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecCHHHHHHHHHhccc--CCCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q 310 (464)
... . .++ .+ +..+++.|++|.++.+ ++..|+++++++.+.+.+...... ...+++.+
T Consensus 187 ~~~--~----~pl-~~-------------gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a 246 (405)
T PRK08776 187 PAL--Q----KPL-EF-------------GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDA 246 (405)
T ss_pred ccc--C----Ccc-cc-------------cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 211 1 111 12 2337889999999644 588999988666665544433222 23566666
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.++...++ +++.+.+...+....+.+.|+++
T Consensus 247 ~l~~~gl~-------tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 247 FLTLRGLR-------TLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHhhhC-------cHHHHHHHHHHHHHHHHHHHHcC
Confidence 66554333 35566677777888888888876
No 184
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.89 E-value=9.3e-21 Score=188.80 Aligned_cols=209 Identities=16% Similarity=0.191 Sum_probs=149.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v 161 (464)
..+|++.+|++++ .+++++++|+++++..++.+++++||.|+++.+.|++... .+... |++++.+
T Consensus 63 ~~~le~~la~l~g----------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~-G~~v~~v 131 (390)
T PRK08133 63 VTMFQERLAALEG----------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARF-GIETTFV 131 (390)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHc-CcEEEEE
Confidence 4678888888874 3468899999999999999999999999999999976544 33445 9999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++++++.+++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .
T Consensus 132 d~~-------d~~~l~~~i~~------~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~-~-- 192 (390)
T PRK08133 132 DLT-------DLDAWRAAVRP------NTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ-Q-- 192 (390)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC-C--
Confidence 753 67888887754 7899999999999999975 678888899999999999998643221 1
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcccC-CCChHHHHHHHHHcCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSSFG-LVSSQTQYLLSRMLSD 319 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~ 319 (464)
+ ..+ +..+++.|+||.++.+|.++ ||++++++.+.+......... .+++..+.+ +++.
T Consensus 193 ---p-l~~-------------g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~g 252 (390)
T PRK08133 193 ---P-LKL-------------GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKG 252 (390)
T ss_pred ---c-hhh-------------CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcc
Confidence 1 111 33477999999998889998 556665443333332233222 234443333 3333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+ .+..+.++..++...+.+.|+++
T Consensus 253 l~----tl~~R~~~~~~~a~~la~~L~~~ 277 (390)
T PRK08133 253 LE----TLSLRMEAHSANALALAEWLEAH 277 (390)
T ss_pred cc----hHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 24555556667778888888876
No 185
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.89 E-value=5.5e-21 Score=190.83 Aligned_cols=217 Identities=15% Similarity=0.250 Sum_probs=150.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----cc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~ 152 (464)
..+|+.+. ..+|++.+|++++ .+. .+++++++.++..++.+++++||.|+++.|.|+.+...+ ..
T Consensus 59 y~r~~~p~-~~~Le~~lA~l~G--------~~~--~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 127 (398)
T PRK07504 59 YSRYSNPT-VDMFEKRMCALEG--------AED--ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPR 127 (398)
T ss_pred eecCCCch-HHHHHHHHHHHhC--------CCe--eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhh
Confidence 35565543 5899999999875 333 345667778888888888999999999999998754432 33
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++ .+|++.+++++.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+
T Consensus 128 ~-G~~v~~vd-------~~d~e~l~~ai~~------~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 128 Y-GIESTLVD-------GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred c-CeEEEEEC-------CCCHHHHHHhcCc------CceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCcc
Confidence 4 88888875 2578999888754 7899999999999999987 6677788889999999999998
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEE-EEEecCHHHHHHHHH-hcccC-CCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVG-MIYSNNERVVSAATK-MSSFG-LVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG-~l~~~~~~~~~~~~~-~~~~~-~~s~~~ 309 (464)
...+. . . ..+ +..+++.|+||.++.+|.|+| +++++++.+.+.++. ....+ .++++.
T Consensus 191 ~~~~~-~-----~-~~~-------------gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~ 250 (398)
T PRK07504 191 TPLFQ-K-----P-LEL-------------GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFN 250 (398)
T ss_pred ccccC-C-----c-hhh-------------CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 53221 1 1 112 445789999999988999996 556655544433332 12222 244444
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+.++...|+. +..+.++..+....+.+.|+++
T Consensus 251 A~~~l~~L~t-------l~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 251 AWTLLKGLET-------LPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred HHHHHhccch-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 4444444433 3334444456667777778765
No 186
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.89 E-value=5.7e-21 Score=192.05 Aligned_cols=295 Identities=16% Similarity=0.198 Sum_probs=199.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCCCChhhhc---ccCCCcEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----DPGDAFLLPTPYYPGFDRDL---KWRPGVEI 158 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~~g~~~ 158 (464)
..++|+.++++++ +++++|++|+|+++++.+++.++. ++||.|++..+.|+.+...+ +.. |+++
T Consensus 49 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~-g~~v 119 (402)
T TIGR02006 49 VENARNQVAELIG--------ADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLERE-GFEV 119 (402)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhc-CCEE
Confidence 4567788888775 678899999999999999887753 68999999999998755443 334 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
+.+++++ ++.+|++.+++.+.+ ++++|++++|+||||.+.+ +++|.++|+++|+++++|++++ ++.
T Consensus 120 ~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a---~g~ 185 (402)
T TIGR02006 120 TYLPPKS--NGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQS---VGK 185 (402)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchh---cCC
Confidence 9998763 456899999988754 6889999999999999976 6678888999999999999997 332
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--------cccCCCChHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--------SSFGLVSSQTQ 310 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~q 310 (464)
. + .++. .....+++.|.+|.+|.+| +|+++.+++......... ...++.+....
T Consensus 186 ~--~-~~~~-------------~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~ 247 (402)
T TIGR02006 186 I--P-INVN-------------ELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQI 247 (402)
T ss_pred c--c-cCcc-------------ccCCCEEEEehhhhcCCCc--eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHH
Confidence 2 1 1211 1144577889999887556 788887543222110000 01123344444
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ccEEEEEecCcccccCChhHHHHHHHHHHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN---AGLFCWVDMRHLLVSNTFEAEKELWKKIIF 386 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~ 386 (464)
.++..+++. +.+.++...+++++.++++.+.|+++ ++.+..+. ....+.+.++. .. ..++...+
T Consensus 248 ~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~-~~------~~~~~~~l-- 315 (402)
T TIGR02006 248 VGMGEAFRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY-VE------GESLIMAL-- 315 (402)
T ss_pred HHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC-cC------HHHHHHhc--
Confidence 444444432 23345666777888888899988875 55554211 10011122221 11 11233222
Q ss_pred hcCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 387 EVGLNISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 387 ~~gI~v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.+|.|+.|..+... ..+++|+|++. .|+++++++++.|++++++.+.
T Consensus 316 -~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 316 -KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred -CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 48999888776531 13789999988 7899999999999999887654
No 187
>PRK14012 cysteine desulfurase; Provisional
Probab=99.89 E-value=4.9e-21 Score=192.68 Aligned_cols=293 Identities=17% Similarity=0.224 Sum_probs=194.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCCCChhhhc---ccCCCcEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----DPGDAFLLPTPYYPGFDRDL---KWRPGVEI 158 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~~g~~~ 158 (464)
..++|+.++++++ +++++|++++|+++++.+++.++. ++||.|+++.++|+.....+ +.. |+++
T Consensus 51 ~~~~r~~ia~~~g--------~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~-g~~~ 121 (404)
T PRK14012 51 VDIARNQIADLIG--------ADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLERE-GFEV 121 (404)
T ss_pred HHHHHHHHHHHcC--------cCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhC-CCEE
Confidence 4567788888775 677899999999999999887763 78999999999997764433 334 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
+.++.++ ++.+|++.+++.+.+ ++++|++++++||||.+++ +++|.++|+++|+++|+|++++ ++.
T Consensus 122 ~~v~~~~--~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~---~g~ 187 (404)
T PRK14012 122 TYLDPQS--NGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQS---VGK 187 (404)
T ss_pred EEEccCC--CCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchh---cCC
Confidence 9998763 567899999998864 7889999999999999975 6778888999999999999997 332
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--------cccCCCChHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--------SSFGLVSSQTQ 310 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~q 310 (464)
. + .++... +..+++.|++|.+| |+ ++|+++.+++......... ...++.+....
T Consensus 188 ~--~-~~~~~~-------------~~D~~~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~ 249 (404)
T PRK14012 188 V--P-IDLSKL-------------KVDLMSFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQI 249 (404)
T ss_pred c--c-cCcccC-------------CCCEEEEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHH
Confidence 2 1 121111 33456779999887 54 6899887654322111100 00111222222
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-----CccEEEEEecCcccccCChhHHHHHHHHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS-----NAGLFCWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-----~~g~f~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
..+.+++... +....+..+..++.++++.+.|+++ ++.+... ...+++|+.+... .++...+
T Consensus 250 ~~l~~al~~~---~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l 317 (404)
T PRK14012 250 VGMGEAARIA---KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG---------ESLIMAL 317 (404)
T ss_pred HHHHHHHHHH---HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH---------HHHHHhC
Confidence 2222332211 2223444556666777777777765 4544321 1233455554321 1243333
Q ss_pred HHhcCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 385 IFEVGLNISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.++.|..|..|.+. ..+.+|++++. .++++++.+++.|++++++.+.
T Consensus 318 ---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~ 382 (404)
T PRK14012 318 ---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLRE 382 (404)
T ss_pred ---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 37888777665432 13689999988 7999999999999999887654
No 188
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=1.8e-20 Score=185.53 Aligned_cols=217 Identities=16% Similarity=0.165 Sum_probs=157.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----ccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~ 152 (464)
..+|+.+ ....|++++|++.+ .+++++|+|+++++..++.+++++||.|+++.|+|+..... ...
T Consensus 47 Y~R~~np-t~~~Le~~lA~leg----------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~ 115 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELES----------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANK 115 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhc
Confidence 4555554 35889999999874 47899999999999999999999999999999999864432 222
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++. .|++.+++++.+ ++++|++++|+||||.+++. ++|.++|+++|+++|+|++|.
T Consensus 116 ~-gi~v~~vd~-------~d~e~l~~~i~~------~tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~ 178 (388)
T PRK08861 116 G-DFKVQFVDQ-------SDAAALDAALAK------KPKLILLETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFL 178 (388)
T ss_pred C-CeEEEEECC-------CCHHHHHHhcCc------CCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcc
Confidence 3 677777752 378888887754 78999999999999999874 567778889999999999998
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHhccc--CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKMSSF--GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~ 309 (464)
...+. . + . .+ +..+++.|++|.++- .++..|++++.++.+.+.++..... ..+++..
T Consensus 179 ~~~~~-~--p-l---~~-------------GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~ 238 (388)
T PRK08861 179 TPVLQ-K--P-L---EL-------------GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFD 238 (388)
T ss_pred ccccC-C--C-c---cc-------------CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHH
Confidence 54322 1 1 1 11 344789999999863 4578999988666565544433332 2356666
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
...+..-++. +.-+.++..+....+.+.|+.+
T Consensus 239 a~l~~rgl~T-------l~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 239 SYMTLRGIRT-------LGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred HHHHHhcCCC-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 6655555554 3334455566677788888876
No 189
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.7e-20 Score=185.90 Aligned_cols=293 Identities=18% Similarity=0.216 Sum_probs=206.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCC-CCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCCh----hhhcccCCCcE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFD-PNKLVLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGF----DRDLKWRPGVE 157 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~ 157 (464)
+.+.|+.+|++++ .+ .++|++|.|+|++++++..++ ..+||.|++..--|+.. ....+.. |++
T Consensus 68 ~e~aRe~va~~~~--------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~-Ga~ 138 (405)
T COG0520 68 YEAAREAVARFLN--------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRT-GAK 138 (405)
T ss_pred HHHHHHHHHHHhC--------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhc-CcE
Confidence 5788899999986 56 489999999999999999998 68999999998887643 3334444 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
++.+|+++ +..++++.++..+.+ ++|+|.+++.+|-||.+.| +++|+++|+++|+++++|.+++- .
T Consensus 139 v~~i~~~~--~g~~~~~~~~~~i~~------~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~---~ 204 (405)
T COG0520 139 VRVIPLDD--DGLLDLDALEKLITP------KTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA---G 204 (405)
T ss_pred EEEEecCC--CCCcCHHHHHHhcCC------CceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECcccc---C
Confidence 99999873 456889999997754 8999999999999999965 88899999999999999999873 2
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc-CCCCCccEEEEEEecCHHHHHHHHHhc----------------
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK-DFSMPGFRVGMIYSNNERVVSAATKMS---------------- 300 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK-~~g~~GlRiG~l~~~~~~~~~~~~~~~---------------- 300 (464)
-. ..++.. .+..++..|.+| .+|..| +|.++++++.+.+. ....
T Consensus 205 h~---~idv~~-------------l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l-~P~~~gg~~~~~~~~~~~~~ 265 (405)
T COG0520 205 HL---PIDVQE-------------LGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEEL-EPFLGGGGMIEYVSRDEGVT 265 (405)
T ss_pred cc---CCCchh-------------cCCCEEEEcccccccCCCc--eEEEEEchHHHhhc-CCcccCCCceeeeccccccc
Confidence 11 123222 267788999999 666336 89999965544332 1100
Q ss_pred ---c-----cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ccEEEEEecCcc
Q 037587 301 ---S-----FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN---AGLFCWVDMRHL 368 (464)
Q Consensus 301 ---~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~---~g~f~~~~l~~~ 368 (464)
. ..+++......+.++++--. .--+++..+..++..+++.+.|.+. +++++.+. .+-.+.+.++..
T Consensus 266 ~~~~p~rfe~gTpn~~~~i~l~aAl~~~~--~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~ 343 (405)
T COG0520 266 LAELPLRFEAGTPNIAGAIGLAAALDYLL--EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI 343 (405)
T ss_pred ccCcchhhccCCchHHHHHhHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC
Confidence 0 01122222222333333211 1113455566667777788888887 68887643 233555665532
Q ss_pred cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC------CCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 369 LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN------EPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 369 ~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
...++... |.++||.++.|..|... .++.+|+|++. .|+||++.+++.|+++.+
T Consensus 344 -------~~~dv~~~-L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 344 -------HPHDVATL-LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -------CHHHHHHH-HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 11234444 56779999999877532 24459999988 799999999999998765
No 190
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.88 E-value=1.8e-20 Score=185.94 Aligned_cols=211 Identities=18% Similarity=0.228 Sum_probs=154.2
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~ 160 (464)
-..+|++.+|++.+ .+..++++++++++..++.+++++||.|+++.++|...... +... |+++..
T Consensus 41 ~~~~le~~la~l~g----------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~-g~~~~~ 109 (369)
T cd00614 41 TVDALEKKLAALEG----------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKL-GIEVTF 109 (369)
T ss_pred hHHHHHHHHHHHHC----------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhc-CeEEEE
Confidence 35788888888875 24567788889999999999999999999999999876543 3344 888888
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+ |++.+++.+++ ++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .
T Consensus 110 v~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~-~- 171 (369)
T cd00614 110 VDPD-------DPEALEAAIKP------ETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ-R- 171 (369)
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC-C-
Confidence 8753 57888887754 7899999999999999976 677888899999999999999753221 1
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcc-c-CCCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSS-F-GLVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l 317 (464)
. ..+ +..+++.|+||.+|.+| ++.||++++++.+.+.++.... + ..++++.+.++...+
T Consensus 172 ----~-~~~-------------g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l 233 (369)
T cd00614 172 ----P-LEL-------------GADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGL 233 (369)
T ss_pred ----h-hhh-------------CCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCC
Confidence 1 111 45688999999997565 8999999976455554443332 2 235566555555555
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG 349 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 349 (464)
+. +..+.++..++...+.+.|++++
T Consensus 234 ~t-------l~~r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 234 KT-------LPLRMERHSENALKVAEFLEKHP 258 (369)
T ss_pred CC-------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 43 33345556677788888888873
No 191
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.3e-20 Score=185.80 Aligned_cols=211 Identities=19% Similarity=0.248 Sum_probs=148.8
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEE
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIV 159 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~ 159 (464)
....+|++++|++++ .+ ..+ +++++++++..++.+++++||+|+++.|+|+..... +... |+++.
T Consensus 61 p~~~~Le~~lA~~~g--------~~-~~i-~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~-gi~~~ 129 (388)
T PRK07811 61 PTRTALEEQLAALEG--------GA-YGR-AFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRW-GVEYT 129 (388)
T ss_pred ccHHHHHHHHHHHhC--------CC-ceE-EeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCC-CeEEE
Confidence 356899999999986 22 234 445668999999999999999999999999864433 2223 77777
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.++. .|++.+++.+.+ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+...+. .
T Consensus 130 ~~d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~-~ 192 (388)
T PRK07811 130 PVDL-------SDLDAVRAAITP------RTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ-Q 192 (388)
T ss_pred EeCC-------CCHHHHHHhcCc------CCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC-C
Confidence 7653 378899888754 78999999999999987 46888888999999999999999753221 1
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhccc-C-CCChHHHHHHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSSF-G-LVSSQTQYLLSRM 316 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~~-~-~~s~~~q~~~~~~ 316 (464)
++ .+ +..+++.|++|.++.+| .+.||++++++.+.+.+...... . ..++.....+...
T Consensus 193 -----p~-~~-------------gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~ 253 (388)
T PRK07811 193 -----PL-AL-------------GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRG 253 (388)
T ss_pred -----ch-hh-------------CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 11 11 33488999999997544 67899998777666655544333 2 2344444444444
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|+. +..+.++..++...+.+.|+++
T Consensus 254 L~t-------l~~R~~~~~~na~~la~~L~~~ 278 (388)
T PRK07811 254 LKT-------LAVRMDRHSENAEAVAEFLAGH 278 (388)
T ss_pred cCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 443 3334444556677778888776
No 192
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=1.8e-20 Score=186.70 Aligned_cols=217 Identities=14% Similarity=0.079 Sum_probs=152.4
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~ 152 (464)
..+|+.+ ...+|++.+|++.+ .+++++++|+++++.+++.+++++||.|+++.|+|+.+.. .+..
T Consensus 59 Y~r~~~p-t~~~Le~~lA~l~g----------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~ 127 (394)
T PRK07050 59 YGLHATP-TSLALAQRLAEIEG----------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARD 127 (394)
T ss_pred cCCCCCH-HHHHHHHHHHHHhC----------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHh
Confidence 3445433 24677777777753 4589999999999999999999999999999999998664 3444
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++.. +.+.+++.+++ ++++|++++|+||+|.. .++++|+++|+++|+++|+|++|.
T Consensus 128 ~-Gi~v~~vd~~-------~~~~l~~~i~~------~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 128 F-GITVRFYDPL-------IGAGIADLIQP------NTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred c-CeEEEEECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcc
Confidence 5 9998887632 34667776643 78999999999999754 789999999999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhccc--CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~ 309 (464)
...+- . + + ..+..+++.|++|.++ ..+++.|++++.++.+.+.++..+.. ..+++..
T Consensus 191 ~~~~~-~-----~---l-----------~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~ 250 (394)
T PRK07050 191 AGLAF-K-----P---F-----------EHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADD 250 (394)
T ss_pred ccccc-C-----H---H-----------HcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHH
Confidence 42211 1 1 1 1145688999999995 34567899888666666655544332 2345554
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
...+...+++ +..+.++..++...+.+.|+++
T Consensus 251 a~l~lr~l~t-------l~~Rl~~~~~~a~~la~~L~~~ 282 (394)
T PRK07050 251 CSLVLRGLPS-------LQVRLAAHDRSALEVAEWLKAR 282 (394)
T ss_pred HHHHHcCCCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 4444433333 2234444555556777777765
No 193
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.88 E-value=3e-20 Score=186.92 Aligned_cols=344 Identities=15% Similarity=0.105 Sum_probs=201.0
Q ss_pred CCCCCCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+-- .+ ..|.+.+++.+.... .....+ .. ..+..+.+.+.+.+..
T Consensus 24 ~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~----------~~~~~~--~~--~~~~~~~~~~~l~~~~--- 86 (400)
T PTZ00125 24 FVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQK----------LTLTSR--AF--YNDVLGLAEKYITDLF--- 86 (400)
T ss_pred EEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHh----------cccccc--cc--cCHHHHHHHHHHHhCC---
Confidence 444445567899876522 22 346666666654221 011111 00 1234444444444322
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc----------CCCCeEEEcCCCCCChhhhcccCCCcEEEE---EecCCC--CCc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA----------DPGDAFLLPTPYYPGFDRDLKWRPGVEIVP---IHCSSS--NGF 169 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~----------~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~---v~~~~~--~~~ 169 (464)
..+.+++++++++++..++..+. ..+++|++.+-+|.+.........+..... .+..+. .-.
T Consensus 87 ---~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PTZ00125 87 ---GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVD 163 (400)
T ss_pred ---CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeC
Confidence 23578999999999999998763 134778888888776543322111211100 000000 000
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCH-HHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH-QELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~-~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
..|++++++.++. .++++|++..++||||.+++. +.+++|.++|++||+++|+||+|.++...+. .+ . ..
T Consensus 164 ~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~--~~-~-~~ 234 (400)
T PTZ00125 164 YNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK--LL-A-HD 234 (400)
T ss_pred CCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hh-H-HH
Confidence 1378999988751 378888887789999999864 5599999999999999999999986433222 11 1 11
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCC---chhh
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSD---KKFT 323 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~---~~~~ 323 (464)
. .. ..+.+ .++||.++.+++|+||++++++ +.+.+... ...+..+++.+.++.+.++. .++
T Consensus 235 ~-~~--------~~pd~---~~~sK~l~~g~~~ig~v~~~~~-~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~- 300 (400)
T PTZ00125 235 H-EG--------VKPDI---VLLGKALSGGLYPISAVLANDD-VMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKL- 300 (400)
T ss_pred h-cC--------CCCCE---EEEcccccCCCcCcEEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCH-
Confidence 1 11 11222 2578999833359999999554 44444322 12233567777777665532 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCC-eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKV----AGI-RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~----~g~-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
.++. +++.+.+.+.|++ .++ ....+ .|.++|+.++... . ....+++..++ ++||.+.|+.
T Consensus 301 ~~~~-------~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~~~v~~~~~~---~-~~~~~~~~~l~-~~Gv~v~~~~-- 365 (400)
T PTZ00125 301 AENA-------QRLGEVFRDGLKELLKKSPWVKEIRG-KGLLNAIVFDHSD---G-VNAWDLCLKLK-ENGLLAKPTH-- 365 (400)
T ss_pred HHHH-------HHHHHHHHHHHHHHHhcCCCeEEEec-ccEEEEEEEccCc---c-hHHHHHHHHHH-HCCeEEeecC--
Confidence 2222 2233334444433 333 22333 5678888876311 1 12335777776 6799998752
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 399 HCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 399 ~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.+++||++.. .+++++++++++|.+++++.+.
T Consensus 366 ----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~~ 398 (400)
T PTZ00125 366 ----DNIIRFAPPLVITKEQLDQALEIIKKVLKSFDS 398 (400)
T ss_pred ----CCEEEEECCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 4689999754 6899999999999999987653
No 194
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=3.5e-20 Score=185.37 Aligned_cols=215 Identities=17% Similarity=0.208 Sum_probs=149.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~ 153 (464)
.+|+.+ ...+|++++|++.+ . +..++++++++++.+++.+++++||+|+++.|+|..... .+...
T Consensus 60 ~r~~~p-~~~~le~~lA~l~g--------~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~ 128 (403)
T PRK07503 60 SRISNP-TLALLEQRMASLEG--------G--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEF 128 (403)
T ss_pred eCCCCc-hHHHHHHHHHHHhC--------C--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhC
Confidence 445443 35889999998875 2 234666677889999999999999999999999975332 23445
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|++++.++.+ |++.+++.+.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.
T Consensus 129 -G~~v~~vd~~-------d~~~l~~~i~~------~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~ 191 (403)
T PRK07503 129 -GVTVRHVDLT-------DPAALKAAISD------KTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCT 191 (403)
T ss_pred -CEEEEEeCCC-------CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 9998888753 67888888764 7899999999999999975 67788888899999999999985
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--ccc--CCCChH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--SSF--GLVSSQ 308 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--~~~--~~~s~~ 308 (464)
... .. ++ .+ +..++++|+||.+|.+| +|.|++++ ++.+.+.++.. ... ..++++
T Consensus 192 ~~~-~~-----~l-~~-------------g~Di~v~S~tK~l~g~gd~~gG~v~~-~~~l~~~l~~~~~~~~~g~~~s~~ 250 (403)
T PRK07503 192 PYL-QR-----PL-EL-------------GADLVVHSATKYLGGHGDITAGLVVG-GKALADRIRLEGLKDMTGAVMSPF 250 (403)
T ss_pred ccc-CC-----ch-hh-------------CCCEEEccccccccCCCceeEEEEEc-CHHHHHHHHhhhHHhCcCCCCCHH
Confidence 322 22 11 11 34488999999998665 88899986 44454444321 211 234555
Q ss_pred HHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 309 TQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 309 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+..+...|+. +..+.++..+....+.+.|+++
T Consensus 251 ~a~l~l~~L~t-------l~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 251 DAFLLMRGLKT-------LALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHcCcch-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 55554444432 3333333445666677777765
No 195
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.1e-20 Score=186.34 Aligned_cols=208 Identities=14% Similarity=0.196 Sum_probs=147.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
..+|++.+|++.+ .+..++++++++++..++.+++++||.|+++.|+|+..... +... |+++..+
T Consensus 66 ~~~le~~lA~l~g----------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~-Gi~v~~v 134 (398)
T PRK08249 66 VQAFEEKVRILEG----------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRM-GVDVTLC 134 (398)
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhC-CeEEEEc
Confidence 4788899999875 23456777778999999999999999999999999875432 3344 8888766
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+. .|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... .
T Consensus 135 d~-------~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~-- 195 (398)
T PRK08249 135 ET-------GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N-- 195 (398)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C--
Confidence 53 478899888764 7899999999999999987 666888899999999999999853221 1
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~ 318 (464)
+. .+ ...++++|+||.+|.+|.++ |++++ ++.+.+.++...... .+++..+.++..-++
T Consensus 196 ---~l-~~-------------~~Divv~S~sK~l~g~~~~~gG~vv~-~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~ 257 (398)
T PRK08249 196 ---PL-AL-------------GADLVIHSATKFLSGHADALGGVVCG-SKELMEQVYHYREINGATMDPMSAYLILRGMK 257 (398)
T ss_pred ---ch-hh-------------CCCEEeccCceecCCCCCceEEEEEC-CHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc
Confidence 11 11 23367899999998667776 66666 555555554433322 345555554444333
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
. +..+.++..+....+.+.|+++
T Consensus 258 t-------L~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 258 T-------LKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 2 3444455566777788888875
No 196
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=4.1e-20 Score=185.97 Aligned_cols=333 Identities=13% Similarity=0.090 Sum_probs=202.6
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.+..+. ......+.......+|.+.++++.
T Consensus 33 ~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~~~------ 96 (401)
T PRK00854 33 VWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGR----------LTLTSRAFRNDQLAPLYEELAALT------ 96 (401)
T ss_pred CEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhh----------ccccccccCCHHHHHHHHHHHhhC------
Confidence 34444556678898654 2223 245566665554221 011111111112234555555442
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC---------CC-CeEEEcCCCCCChhhhcccCCC-------------cEEEE
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD---------PG-DAFLLPTPYYPGFDRDLKWRPG-------------VEIVP 160 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~~g-------------~~~~~ 160 (464)
..+.+++++++++++..++.++.. +| ++|++..-+|++....+... + ..+..
T Consensus 97 ----~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 171 (401)
T PRK00854 97 ----GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGF-STDPDARGGFGPFTPGFRV 171 (401)
T ss_pred ----CCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhc-cCCccccccCCCCCCCeEE
Confidence 235899999999999999988742 23 67888887776643222111 1 11222
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHH-HHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQ-ELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~-~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
++. .|++.+++.+.+ ++++|++.+|+||+|.+++++ .+++|.++|++||+++|+||+|.++.+.+.
T Consensus 172 ~~~-------~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~ 238 (401)
T PRK00854 172 VPF-------GDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK 238 (401)
T ss_pred eCC-------CCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch
Confidence 221 378889888753 789999999999999999754 599999999999999999999986433221
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRM 316 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~ 316 (464)
.+ . ... .+. . ..++ .+||.++ .| +|+|+++++++ +.+.+..... .+..+++.+.++.+.
T Consensus 239 --~~-~-~~~-~g~-------~-~D~~---~~~K~l~-gg~~~ig~v~~~~~-~~~~l~~~~~~~t~~~~~~~~aa~~a~ 300 (401)
T PRK00854 239 --LL-A-EEH-EGI-------E-ADVT---LIGKALS-GGFYPVSAVLSNSE-VLGVLKPGQHGSTFGGNPLACAVARAA 300 (401)
T ss_pred --Hh-H-Hhh-cCC-------C-CCEE---Eeccccc-CCccCeEEEEEcHH-HHhcccCCCCCCCCCcCHHHHHHHHHH
Confidence 11 1 001 110 1 2222 2479997 55 79999999554 4444432211 223577888888877
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
|+..+ + ....+.++++.+++.+.|++.+... ..+.+. ++.+.+.... ....+++..|+ ++||.+.
T Consensus 301 L~~l~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~-~~~i~~~~~~-----~~~~~~~~~L~-~~GV~v~ 368 (401)
T PRK00854 301 LKVLT---E--EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGL-MLAVELEPEA-----GGARQYCEALK-ERGLLAK 368 (401)
T ss_pred HHHHH---H--cCHHHHHHHHHHHHHHHHHhhccCceEEEeccce-EEEEEEecCc-----hhHHHHHHHHH-HCCeEEe
Confidence 75321 1 2245666677788888888764321 234444 4444442210 12235777776 5699997
Q ss_pred CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 394 PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
+. ..+++|+++.. .+++++++++++|++++.
T Consensus 369 ~~------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 369 DT------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred cC------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 53 24689999864 699999999999998874
No 197
>PLN00144 acetylornithine transaminase
Probab=99.88 E-value=3.4e-20 Score=184.41 Aligned_cols=334 Identities=16% Similarity=0.086 Sum_probs=207.2
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+ ....+... ...+....+|+.+.+.
T Consensus 8 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~-~~~~~~~~la~~l~~~---- 69 (382)
T PLN00144 8 KLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAG-------------TLAHVSNV-YHTIPQVELAKRLVAS---- 69 (382)
T ss_pred EEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHH-------------hcCCcccc-ccCHHHHHHHHHHHhc----
Confidence 3334456678888655 2233 34666666666422 11111111 1234455666666432
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---C------C------CCeEEEcCCCCCChhhhcccCCCcE------------
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA---D------P------GDAFLLPTPYYPGFDRDLKWRPGVE------------ 157 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~---~------~------gd~Vlv~~p~y~~~~~~~~~~~g~~------------ 157 (464)
...+.|+++++++|++..+++... . + ..+|+....+|++....+....+-.
T Consensus 70 --~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~ 147 (382)
T PLN00144 70 --SFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPG 147 (382)
T ss_pred --CCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 124689999999999999988642 1 0 2468888888887653322211211
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH--HHHHHHHHhhCCeEEEEeccccccc
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE--LNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~--l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
+..++. .|++.+++.+.. .++++|++.--+|| |.+++.+. +++|.++|++||+++|+||+|.++.
T Consensus 148 ~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g 214 (382)
T PLN00144 148 VTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG 214 (382)
T ss_pred eEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence 111111 267888877642 36666655423788 54554444 9999999999999999999998754
Q ss_pred cCCCCCCccc-hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHH
Q 037587 236 FDSPSSSFIS-IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYL 312 (464)
Q Consensus 236 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~ 312 (464)
..+. .+.. ...+ .++ +.||||.++ +|+|+||++++++ +.+.+.. ....+..+++++++
T Consensus 215 r~g~--~~~~~~~~~-----------~PD----i~t~sK~l~-~G~pig~v~~~~~-~~~~~~~~~~~~T~~~~pl~~aa 275 (382)
T PLN00144 215 RTGY--LWAHEAYGV-----------EPD----IMTLAKPLA-GGLPIGAVLVTEK-VASAINPGDHGSTFAGGPLVCNA 275 (382)
T ss_pred ccch--HhhhhhcCC-----------CCC----EEEeccccc-CCcceEEEEEcHH-HHhccCCCCCCCCCCCCHHHHHH
Confidence 3332 1111 1122 112 679999998 9999999999544 4444332 22223467788888
Q ss_pred HH---HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcC
Q 037587 313 LS---RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 313 ~~---~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~g 389 (464)
+. .+++++++ .++++++.+.++ +.+.+.+.+++........|+++|+++.. . ...++..+ .++|
T Consensus 276 a~a~l~~i~~~~~-~~~~~~~g~~l~---~~l~~~~~~~~~~~~vrg~G~~~~l~l~~--~------~~~~~~~~-~~~G 342 (382)
T PLN00144 276 ALAVLDKISKPGF-LASVAKKGEYLR---ELLRRKLGGNPHVKEVRGVGLLVGIQLDV--P------AGPLVDAC-RDSG 342 (382)
T ss_pred HHHHHHHHhhchH-HHHHHHHHHHHH---HHHHHHHhhCCCceeeecCceEEEEEecC--c------cHHHHHHH-HHCC
Confidence 77 55666555 556666666553 34555555553211112378999999831 1 12456665 4689
Q ss_pred eEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 390 LNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 390 I~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
|.+.|+.. .+.+|++++. ++++++++++++|.+++.+.
T Consensus 343 v~i~~~~~-----~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 343 LLVLTAGK-----GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred eEEeecCC-----CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 99998731 3689999988 89999999999999998753
No 198
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=5e-20 Score=183.15 Aligned_cols=215 Identities=18% Similarity=0.265 Sum_probs=151.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~ 153 (464)
.+|+.+ -..+|++.++++++ . +.+++++++++++..++.+++++||+|+++.+.|+.... .+...
T Consensus 49 ~r~~~p-~~~~le~~la~l~g--------~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~ 117 (380)
T TIGR01325 49 SRYANP-TVAAFEERIAALEG--------A--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRF 117 (380)
T ss_pred ecCCCc-hHHHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHh
Confidence 456544 35888999998874 2 467889999999999999999999999999998876432 34445
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|++++.++.+ |++.+++.+++ ++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..
T Consensus 118 -g~~v~~v~~~-------d~~~l~~~i~~------~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~ 180 (380)
T TIGR01325 118 -GIEVSFVDPT-------DLNAWEAAVKP------NTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFAT 180 (380)
T ss_pred -CCEEEEECCC-------CHHHHHHhcCC------CceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 8998888753 67888877653 7899999999999999965 67788888899999999999975
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHh-cccC-CCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKM-SSFG-LVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~-~~~~-~~s~~~q 310 (464)
..+. . + ..+ +..+++.|+||.++.+|.++ |+++++++ +.+.++.. ...+ ..++...
T Consensus 181 ~~~~-~-----p-l~~-------------g~Divv~S~sK~l~g~g~~~gG~vv~~~~-~~~~l~~~~~~~g~~~~p~~a 239 (380)
T TIGR01325 181 PVLQ-Q-----P-LKL-------------GADVVVYSATKHIDGQGRVMGGVIAGSEE-LMAEVAVYLRHTGPAMSPFNA 239 (380)
T ss_pred cccC-C-----c-hhh-------------CCCEEEeeccceecCCCCeEEEEEEeCHH-HHHHHHHHHHhhCCCCCHHHH
Confidence 3221 1 1 111 34577889999998788876 67777544 44434332 2232 2333333
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
. .+++..+. +..+.++..+.+..+.+.|+++
T Consensus 240 ~---~~l~~l~t----l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 240 W---VLLKGLET----LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred H---HHHhccCc----HHHHHHHHHHHHHHHHHHHHcC
Confidence 3 33333332 4445556666777888888876
No 199
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=3.5e-20 Score=184.57 Aligned_cols=216 Identities=15% Similarity=0.207 Sum_probs=149.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh----hhccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD----RDLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~ 152 (464)
..+|+.+ ...+|++++|++++ . +..++++++++++..++.+++.+||.|+++.|.|+... ..+..
T Consensus 53 y~r~~~p-~~~~le~~lA~l~g--------~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~ 121 (391)
T TIGR01328 53 YSRLGNP-TVSNLEGRIAFLEG--------T--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTK 121 (391)
T ss_pred eeCCCCc-hHHHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhc
Confidence 3455544 34789999999986 2 23577777788999999999999999999999887543 22344
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |+++..++++ |++.+++.+.+ ++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+
T Consensus 122 ~-G~~~~~vd~~-------d~e~l~~~i~~------~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 122 F-GIQVDFINMA-------IPEEVKAHIKD------NTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred C-CeEEEEECCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCc
Confidence 4 8888888753 68888888764 7899999999999999976 6677888889999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHh--ccc-C-CCCh
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKM--SSF-G-LVSS 307 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~--~~~-~-~~s~ 307 (464)
...+ .. .+ .. ...+++.|+||.+|.+|.++ |++++ ++.+.+.++.. ... . .+++
T Consensus 185 ~~~~-~~-----~~-~~-------------g~Divv~S~sK~lgg~g~~~gG~v~~-~~~li~~l~~~~~~~~~g~~l~~ 243 (391)
T TIGR01328 185 TPML-TN-----PV-AL-------------GVDVVVHSATKYIGGHGDVVAGLICG-KAELLQQIRMVGIKDMTGSVISP 243 (391)
T ss_pred hhcc-CC-----ch-hc-------------CCCEEEccccccccCCCCceEEEEEc-CHHHHHHHHHHHHHhCCCCCCCc
Confidence 4322 11 11 11 33478899999999888775 66666 44544444422 112 2 2444
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 308 QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+...++...++. +..+.++..+....+.+.|+++
T Consensus 244 ~~a~l~l~~L~t-------l~~r~~~~~~na~~la~~L~~~ 277 (391)
T TIGR01328 244 FDAWLILRGLKT-------LNIRMKRHSENAMKVAEYLKSH 277 (391)
T ss_pred HHHHHHHhCcCc-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 444444443332 2334455566677778888775
No 200
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.87 E-value=3.2e-21 Score=190.75 Aligned_cols=281 Identities=15% Similarity=0.179 Sum_probs=189.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CC-CeEEEcCCCCCChhhh---cccCCCcE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD----PG-DAFLLPTPYYPGFDRD---LKWRPGVE 157 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~----~g-d~Vlv~~p~y~~~~~~---~~~~~g~~ 157 (464)
..++|+.++++++ +++++|++|+|+++++..++.++.. +| +.|++....|+.+... ++.. |++
T Consensus 44 ~~~~r~~la~~~g--------~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~-G~~ 114 (353)
T TIGR03235 44 VERARKQVAEALG--------ADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERN-GFT 114 (353)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhc-CCE
Confidence 3567777887775 6788999999999999999888753 55 7788887666654333 3445 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
++.+++++ ++.+|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++++ ++
T Consensus 115 v~~v~~~~--~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~---~g 180 (353)
T TIGR03235 115 VTYLPVDE--SGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQV---VG 180 (353)
T ss_pred EEEEccCC--CCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhh---cC
Confidence 99999863 467899999988753 6889999999999999987 6778888999999999999987 33
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH-HHHh---------cccCCCCh
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA-ATKM---------SSFGLVSS 307 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~-~~~~---------~~~~~~s~ 307 (464)
.. + .++. ..+..+++.|++|.+|.+| +|+++.+++.+... .... ...++.+.
T Consensus 181 ~~--~-~~~~-------------~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 242 (353)
T TIGR03235 181 KI--T-VDLS-------------ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPV 242 (353)
T ss_pred Cc--c-cccc-------------ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCCCcCccccCCCCh
Confidence 22 1 1111 1245577789999987666 79998865432111 1100 01223344
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCcc---EEEEEecCcccccCChhHHHHHHHHH
Q 037587 308 QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAG---LFCWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g---~f~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
....++.++++. +.+..+..+++++++++.+.+.|.+.|+++..+..+ .++.+.++. . . ..++...
T Consensus 243 ~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-~-----~-~~~v~~~- 311 (353)
T TIGR03235 243 HLIVGMGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSIDG-V-----N-SEALIVN- 311 (353)
T ss_pred HHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeCC-c-----C-HHHHHHH-
Confidence 444444444442 133456677888889999999998888887643221 133333331 1 1 1234444
Q ss_pred HHhcCeEEeCCCCCCCCC--CCeEEEEeecCCHHHHHH
Q 037587 385 IFEVGLNISPGSSCHCNE--PGWFRICFANITEETLQV 420 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~~--~~~~Ris~~~~~~e~l~~ 420 (464)
|++ ||.|.+|..|.... +.++|.+++. +++++..
T Consensus 312 L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~~~~ 347 (353)
T TIGR03235 312 LRA-DAAVSTGSACSSSKYEPSHVLQAMGL-DTDRARG 347 (353)
T ss_pred HhC-CeEEEchhhcCCCCCCCCHHHHHcCC-CHHHhCc
Confidence 455 99999999987543 3468888884 6555543
No 201
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.87 E-value=3.7e-20 Score=184.86 Aligned_cols=217 Identities=17% Similarity=0.215 Sum_probs=154.7
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----hhhccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF----DRDLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~ 152 (464)
..+|+.+. ..+|++.+|++.+ .++.+++++++.++..++.+++.+||.|+++...|++. ...+..
T Consensus 64 Y~r~~~p~-~~~le~~lA~l~g----------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~ 132 (403)
T PRK07810 64 YSRYGNPT-VSMFEERLRLIEG----------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPR 132 (403)
T ss_pred eeCCCCch-HHHHHHHHHHHhC----------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHH
Confidence 45566543 5788889988875 23677888888899889889999999999988666443 334454
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++. .|++++++++.+ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+
T Consensus 133 ~-G~~v~~vd~-------~d~~~l~~ai~~------~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 133 W-GVETVFVDG-------EDLSQWEEALSV------PTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred c-CcEEEEECC-------CCHHHHHHhcCc------CceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCC
Confidence 5 999988864 278899988764 7899999999999999875 7778888999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHh-ccc-CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKM-SSF-GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~-~~~-~~~s~~~ 309 (464)
...+. . +. .+ +..+++.|++|.++..|.++ |+++++++.+.+.++.. ... ..++++.
T Consensus 196 ~~~~~-~-----~~-~~-------------gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~ 255 (403)
T PRK07810 196 TPLLQ-R-----GL-PL-------------GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFN 255 (403)
T ss_pred ccccC-C-----hh-hc-------------CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHH
Confidence 43221 1 10 11 34678999999998788887 88888665554333332 222 2456666
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
++++...|+. +..+.++..+....+.+.|+++
T Consensus 256 a~l~l~~L~t-------l~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 256 AWVLLKGLET-------LALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred HHHHHhccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 6666665554 3344444555666677788776
No 202
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=4.7e-20 Score=182.75 Aligned_cols=172 Identities=19% Similarity=0.340 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+++++++++.+..+ .+++++|+|+++++.+++.++ ++|||+|+++.|+|..+...+... |++++.+++++
T Consensus 30 g~~~~~~e~~la~~~g------~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~~~~-G~~~v~vd~d~ 102 (376)
T TIGR02379 30 GPFSRRCETWLENRTG------TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIRP 102 (376)
T ss_pred cHHHHHHHHHHHHHhC------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEecCC
Confidence 4567777777766543 468999999999999999887 799999999999999888777766 99999999985
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~~ 244 (464)
++|.+|++.+++.+.+ ++++|+ |+||+|...+ +++|.++|+++|++||+|++|+... +.+. ..
T Consensus 103 -~~~~~d~~~le~~i~~------~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~~~~~--~~- 166 (376)
T TIGR02379 103 -DTMNIDETLIESAITH------RTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMSTYKGR--AL- 166 (376)
T ss_pred -CcCCCCHHHHHHhcCc------CceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCccCCc--cc-
Confidence 4588999999998764 788776 5678998875 6678888999999999999998543 3322 11
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCC----cCCCCCccEEEEEEecCHHHHHHHHHhc
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLS----KDFSMPGFRVGMIYSNNERVVSAATKMS 300 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~S----K~~g~~GlRiG~l~~~~~~~~~~~~~~~ 300 (464)
+....+.+|| |.+. +|.+.|+++++++.+.+.++.++
T Consensus 167 ------------------g~~~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 167 ------------------GSIGHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred ------------------CCCCCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence 1111233344 8885 78889999998777777665543
No 203
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.87 E-value=7.2e-19 Score=177.62 Aligned_cols=376 Identities=14% Similarity=0.104 Sum_probs=214.4
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+.......+.+..+|+.+-+...
T Consensus 33 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p- 98 (443)
T PRK08360 33 AKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTD-------------KLIHYTPIYGFPVEPLLLAEKLIEIAP- 98 (443)
T ss_pred eEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHH-------------hccCccccccCcHHHHHHHHHHHHhCC-
Confidence 35555566788998766 4444 34667777666522 222222211224555666666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecCCC--C
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCSSS--N 167 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~~~--~ 167 (464)
..-+.++++++++|++..+++... .....|+...-+|++....+....|. .+..++.... .
T Consensus 99 ---~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (443)
T PRK08360 99 ---GDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRC 175 (443)
T ss_pred ---CCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccc
Confidence 223589999999999999988642 23357888887887653221111011 1222322110 0
Q ss_pred Ccc--------cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 168 GFR--------ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 168 ~~~--------~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
.+. .+++.+++.++.. ..+.++++|++. | +||+|.+++ .+.++++.++|+++|+++|+||+|.++.+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~e-P~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~ 253 (443)
T PRK08360 176 PFGKEPGSCKMECVEYIKEKFEGE-VYAEGVAALFAE-PIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRT 253 (443)
T ss_pred cccCchhhhHHHHHHHHHHHHHhc-cCCCCeEEEEEC-CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence 011 1233444444321 113467776665 6 699999887 557999999999999999999999975443
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHH
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSR 315 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~ 315 (464)
+. . .....+ + ..+.++ +|||.+| +|+|+||++++ +.+.+.+..... .+..+++.+.++.+
T Consensus 254 G~--~-~a~~~~--~--------~~pDii---tlsK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a 315 (443)
T PRK08360 254 GK--W-FAIEHF--G--------VEPDII---TLGKPLG-GGLPISATIGR-AEIMDSLPPLAHAFTLSGNPVASAAALA 315 (443)
T ss_pred cc--c-hhhhhc--C--------CCCCEE---Eeccccc-CCceeEEEEEc-HHHHhhhcCCCCCCCCCcCHHHHHHHHH
Confidence 32 1 111111 1 112333 7899999 99999999995 445554443221 22356777777777
Q ss_pred HcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc--cCChhHHHHHHHHHHHhcCeEEe
Q 037587 316 MLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV--SNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~--~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
+++.-.- .+..++.++.-...++.|.+...++++......-|+++-+++..... .........+...++ ++||++.
T Consensus 316 ~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~ 393 (443)
T PRK08360 316 VIEEIEE-KNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVT 393 (443)
T ss_pred HHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEe
Confidence 6653211 11122222222222222322222233221122345677777642211 111122234555554 6799986
Q ss_pred CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCccccccccceeeeee
Q 037587 394 PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQMLLLQRRSIIGKW 448 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 448 (464)
+.. .+.+|++.+. +++++++++++++.+++...+..+.+.++..|..-|
T Consensus 394 ~~~------~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 443 (443)
T PRK08360 394 FFS------GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEEGKVPDEVLEKVKGW 443 (443)
T ss_pred ecC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhccCCHHHHHhhcCC
Confidence 431 3579997766 799999999999999999988877776666666655
No 204
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.87 E-value=2.5e-19 Score=180.69 Aligned_cols=358 Identities=11% Similarity=0.055 Sum_probs=202.9
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.++.+ ....+.......+.+..+|+.+.+...
T Consensus 25 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p- 90 (420)
T TIGR00700 25 AILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVA-------------EFTHTCFMVTPYEGYVALAEKLNRIAP- 90 (420)
T ss_pred eEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHH-------------hccCccccccCChHHHHHHHHHHHhCC-
Confidence 34445556778998765 2323 34666666666422 111111111113334455555543321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC--------c-----EEEEEecCC--C
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG--------V-----EIVPIHCSS--S 166 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g--------~-----~~~~v~~~~--~ 166 (464)
....+.++++++++|++..+++... ....+|+...-+|++....+....+ . .+..++... .
T Consensus 91 --~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (420)
T TIGR00700 91 --GSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYR 168 (420)
T ss_pred --CCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccc
Confidence 0112589999999999999888642 2335788888888776432221101 0 112222210 0
Q ss_pred C-------CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH-HHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 167 N-------GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE-LNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 167 ~-------~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~-l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
. .+.-+++.+++.+.. .....++.+|++.--..-+|..++..+ +++|.++|++||+++|+||+|.++.+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g 247 (420)
T TIGR00700 169 DGLLDKQLSTDGELAAARAIFVI-DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTG 247 (420)
T ss_pred ccccccchhHHHHHHHHHHHHHh-hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc
Confidence 0 011113455554421 112346766666433566788665554 9999999999999999999999864433
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRM 316 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~ 316 (464)
. +.+.... +.+..+.+|||.++ +|+|+||+++++ .+.+.+.. ....+..++++|+++.+.
T Consensus 248 ~---~~a~~~~-------------~~~pDi~~lsK~l~-~G~pig~v~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~ 309 (420)
T TIGR00700 248 A---MFACEHE-------------GPEPDLITTAKSLA-DGLPLSGVTGRA-EIMDAPAPGGLGGTYAGNPLACAAALAV 309 (420)
T ss_pred h---hHHHhhc-------------CCCCCEEEeecccc-CCcceEEEEecH-HHHhhcCCCCcCCCCCcCHHHHHHHHHH
Confidence 2 1121111 11222447999999 999999999954 45444422 222334678888888655
Q ss_pred cC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccc-cCChhHHHHHHHHHHHhcCeE
Q 037587 317 LS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLV-SNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 317 l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~-~~~~~~~~~l~~~ll~~~gI~ 391 (464)
++ +..+ .++.++..+.++++.+.+. .+++ +....+. |+++|+++..... .........+...+ .++||.
T Consensus 310 l~~l~~~~~-~~~~~~~g~~l~~~L~~l~---~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~ 383 (420)
T TIGR00700 310 LAIIESEGL-IERARQIGRLVTDRLTTLK---AVDPRIGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLL 383 (420)
T ss_pred HHHHHhccH-HHHHHHHHHHHHHHHHHHH---hhCCCEEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeE
Confidence 53 3333 4444444444444433332 3333 2333444 6788888742110 11111223344444 468999
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 392 ISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 392 v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
+.|+..|+ +++||+++. ++++++++++++|.+++.
T Consensus 384 i~p~~~f~----~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 384 LLTCGMFG----NIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EeccCCCC----CEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 99987763 589999876 689999999999999874
No 205
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.86 E-value=6.6e-20 Score=175.30 Aligned_cols=302 Identities=19% Similarity=0.237 Sum_probs=212.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHH--hcC----CCCeEEEcCCCCCChhhhcccC--CCcE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFC--LAD----PGDAFLLPTPYYPGFDRDLKWR--PGVE 157 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~--l~~----~gd~Vlv~~p~y~~~~~~~~~~--~g~~ 157 (464)
..+.|+.||+.++ +++++|++|+|+||+.++++.. ... .|..|++..--|+.....++.+ .|.+
T Consensus 46 ve~AR~~iA~llg--------a~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~ 117 (386)
T COG1104 46 VEEAREQIAKLLG--------ADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFE 117 (386)
T ss_pred HHHHHHHHHHHhC--------CCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCe
Confidence 4567788888876 7889999999999999999987 322 4678999888888776665533 4999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
|.++|++. +..+|+++|+++|++ ++.+|-+...||-||++.| +++|.++|+++++++.+|.+.+ ++
T Consensus 118 Vtyl~V~~--~G~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQp---I~ei~~i~k~~~i~fHvDAvQa---~G 183 (386)
T COG1104 118 VTYLPVDS--NGLVDLEQLEEALRP------DTILVSIMHANNETGTIQP---IAEIGEICKERGILFHVDAVQA---VG 183 (386)
T ss_pred EEEeCCCC--CCeEcHHHHHHhcCC------CceEEEEEecccCeeeccc---HHHHHHHHHHcCCeEEEehhhh---cC
Confidence 99999886 346899999999976 7888888899999999954 7778889999999999999998 55
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH------HhcccCCCChHHHH
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT------KMSSFGLVSSQTQY 311 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~------~~~~~~~~s~~~q~ 311 (464)
.- + .++..+ ...+...|-+|.+|..| +|.++.++..-...+. +-...++.+.+...
T Consensus 184 ki--p-i~~~~~-------------~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Iv 245 (386)
T COG1104 184 KI--P-IDLEEL-------------GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIV 245 (386)
T ss_pred ce--e-cccccc-------------CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHH
Confidence 43 1 222111 23455668899999778 7888874322111110 00111234444445
Q ss_pred HHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeecCC---ccEEEEEecCcccccCChhHHHHHHHHHHH
Q 037587 312 LLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA--GIRCLKSN---AGLFCWVDMRHLLVSNTFEAEKELWKKIIF 386 (464)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~ 386 (464)
++..+++.. .+.++.....+.+.|++|.+.|.+. ++.+.... -...+.+.++.. +. +.....|+
T Consensus 246 g~~~A~~~a---~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv------~g--E~ll~~L~ 314 (386)
T COG1104 246 GFGKAAEIA---VEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV------EG--ESLLLALD 314 (386)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC------cH--HHHHHhcc
Confidence 555554432 3345666677888889999999875 33333221 122333444421 11 34555667
Q ss_pred hcCeEEeCCCCCCCCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCccccc
Q 037587 387 EVGLNISPGSSCHCNE-----------------PGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQMLL 438 (464)
Q Consensus 387 ~~gI~v~pg~~f~~~~-----------------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~~~~ 438 (464)
.+||.+..|+.|.... .+.+|+|++. .++++++.+++.|.+++++.+..+..
T Consensus 315 ~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~~~ 384 (386)
T COG1104 315 LAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELSPL 384 (386)
T ss_pred ccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhccc
Confidence 8899999999988531 3579999998 78999999999999999998875543
No 206
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=8.5e-20 Score=179.82 Aligned_cols=289 Identities=15% Similarity=0.178 Sum_probs=186.1
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
..+|+.+ ...+|++++|++.+ .+++++++|+++++.+++. ++++||+|+++.+.|......+... ..
T Consensus 48 Y~R~~~p-~~~~le~~lA~leg----------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~-~~ 114 (364)
T PRK07269 48 YTRTKNP-TRAKLEETLAAIES----------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQ-EK 114 (364)
T ss_pred eeCCCCc-cHHHHHHHHHHHhC----------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHH-Hh
Confidence 4556554 35899999999974 5689999999999999984 6799999999999997655432211 00
Q ss_pred E-EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 157 E-IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 157 ~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
+ -+.+ .|..|++++++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|....
T Consensus 115 ~~~~~~------~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~ 179 (364)
T PRK07269 115 EGRFHF------TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPI 179 (364)
T ss_pred cCcEEE------EecCCHHHHHHhcCc------CceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccc
Confidence 0 0111 233578999888864 789999999999999886 68888889999999999999986422
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhccc--CCCChHHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYL 312 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~ 312 (464)
+ .. + ... ...+++.|++|.++-.| .=.|+++++++.+.+.++..... ...+++....
T Consensus 180 ~-~~-----p-l~~-------------gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l 239 (364)
T PRK07269 180 Y-QR-----P-IEL-------------GADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYL 239 (364)
T ss_pred c-CC-----c-hhh-------------CCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 2 11 1 111 34488999999996323 23578888666665555433322 2356666666
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eee-cCCccEEEEEecCcccccCChhHHHHHH--------
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCL-KSNAGLFCWVDMRHLLVSNTFEAEKELW-------- 381 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~-------- 381 (464)
+..-|+. +..+.++.++....+.+.|+++ ++ .|. |+.+|++. +.+... .....++
T Consensus 240 ~~~~L~t-------L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~~------~~~~~f~~~l~~~~~ 305 (364)
T PRK07269 240 LMRGLKT-------LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMIS-FKVADE------TRIPHILNSLKVFTF 305 (364)
T ss_pred HHcCCCc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEE-EEECCH------HHHHHHHHhCCcceE
Confidence 6555554 3444555566777788888876 33 444 77788554 444310 1111111
Q ss_pred -HHHHHhcCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 382 -KKIIFEVGLNISPGSSCHCN-----------EPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 382 -~~ll~~~gI~v~pg~~f~~~-----------~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
..+...+.+.+.|+..++.. .++.+|+|++. |+.+.+++-|.++++
T Consensus 306 ~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 306 AESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred ccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 11112234555565544321 24689999995 456666666666653
No 207
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.6e-19 Score=178.44 Aligned_cols=210 Identities=15% Similarity=0.158 Sum_probs=143.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v 161 (464)
..+|++.+|++.+ .+ +.+++++| +.++..++. ++++||+|+++.|.|++... .++.. |++++.+
T Consensus 56 ~~~le~~lA~l~g--------~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~-G~~v~~v 123 (390)
T PRK08064 56 REALEDIIAELEG--------GT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRF-GIEHTFV 123 (390)
T ss_pred HHHHHHHHHHHhC--------CC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHc-CCEEEEE
Confidence 4678888888875 33 45666666 567887775 77899999999999985443 33445 9999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++.+++.+.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..... ..
T Consensus 124 ~~~-------d~~~l~~~l~~------~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~-~~-- 184 (390)
T PRK08064 124 DMT-------NLEEVAQNIKP------NTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLL-QK-- 184 (390)
T ss_pred CCC-------CHHHHHHhcCC------CceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccc-cC--
Confidence 753 67888887754 7899999999999999964 66778888899999999999975321 11
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
++ .+ +..+++.|+||.++ .+|...|++++.++.+.+.++.....+......+.+.. ++..-
T Consensus 185 ---~~-~~-------------g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l-~~~gl 246 (390)
T PRK08064 185 ---PL-DL-------------GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL-VLRGL 246 (390)
T ss_pred ---ch-hh-------------CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH-HHccc
Confidence 11 12 45678999999985 34566788877666666666655554333222222222 22332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
. .+..+.++..+....+.+.|+++
T Consensus 247 ~----tl~~R~~~~~~~a~~la~~L~~~ 270 (390)
T PRK08064 247 K----TLHVRLEHSSETANKIALYLQEH 270 (390)
T ss_pred C----cHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 24445555566777778888765
No 208
>PRK05968 hypothetical protein; Provisional
Probab=99.86 E-value=4.7e-19 Score=176.54 Aligned_cols=280 Identities=17% Similarity=0.145 Sum_probs=179.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh----hhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD----RDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~~g~~~~~v 161 (464)
..+|++++|++.+ . ...+ ++++++.++..++.+++++||+|+++.++|.... ..+... |++++.+
T Consensus 65 ~~~le~~lA~l~g--------~-~~av-~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (389)
T PRK05968 65 VRAFEEMLAKLEG--------A-EDAR-GFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRM-GVEVDYV 133 (389)
T ss_pred HHHHHHHHHHHhC--------C-CcEE-EECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CceEEEe
Confidence 4789999999875 2 2334 4556668999999889999999999999998643 334445 9998888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++.+++.+ . ++++|++++|+||++ +..++++|+++|+++|+++|+|++|+...+. .
T Consensus 134 d~~-------d~~~l~~~i-~------~tklV~ie~pt~~~~---~~~dl~~i~~la~~~gi~vivD~a~a~~~~~-~-- 193 (389)
T PRK05968 134 DGR-------DEEAVAKAL-P------GAKLLYLESPTSWVF---ELQDVAALAALAKRHGVVTMIDNSWASPVFQ-R-- 193 (389)
T ss_pred CCC-------CHHHHHHhc-c------cCCEEEEECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcchhcc-C--
Confidence 642 678888776 2 678999987766655 4489999999999999999999999754222 1
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcc--c-CCCChHHHHHHHHHc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSS--F-GLVSSQTQYLLSRML 317 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~--~-~~~s~~~q~~~~~~l 317 (464)
++ .+ +..+++.|+||.++.+| ++.|+++++++ +.+.++.... . ..++++.+..+...|
T Consensus 194 ---p~-~~-------------g~Divv~S~tK~l~g~~~~~gG~i~~~~~-~~~~l~~~~~~~~g~~~~~~~A~~~l~~L 255 (389)
T PRK05968 194 ---PI-TL-------------GVDLVIHSASKYLGGHSDTVAGVVAGSKE-HIARINAEAYPYLGAKLSPFEAWLLLRGL 255 (389)
T ss_pred ---ch-hc-------------CCcEEEeeccccccCCCCeEEEEEEECHH-HHHHHHHHHHHhCCCCCChHHHHHHHccc
Confidence 11 11 33477889999997654 68899887544 4443333211 1 235666566555555
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eeecC-----------CccEEEEEecCcccccCChhHHHHHHHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCLKS-----------NAGLFCWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~-----------~~g~f~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
+. +..+.++..+....+.+.|+++ ++ .+..| ..|-.+.+++... ....+++..|
T Consensus 256 ~t-------l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~------~~~~~f~~~L 322 (389)
T PRK05968 256 RT-------LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG------IDVRAFADAL 322 (389)
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH------HHHHHHHHhC
Confidence 53 2333333444566677888776 45 33322 1122455666521 1223465555
Q ss_pred HHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 385 IFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+..++.+.-|..+.. -.++.+|+|++. |+.+.+++-|++++++
T Consensus 323 -~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~ 386 (389)
T PRK05968 323 -KLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGL---EGTEALWADLEQALAA 386 (389)
T ss_pred -CccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHH
Confidence 445666655554440 014689999996 4455566666666654
No 209
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=4.8e-19 Score=176.27 Aligned_cols=291 Identities=14% Similarity=0.095 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh--------------cCCCCeEEEcCCCCCChhhhcc
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL--------------ADPGDAFLLPTPYYPGFDRDLK 151 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l--------------~~~gd~Vlv~~p~y~~~~~~~~ 151 (464)
+.+|.++||++++ .+..++.+.+..+...++.++ .+++|.|+...-.|......++
T Consensus 149 h~~LE~~LA~f~g----------~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ 218 (476)
T PLN02955 149 HRLLESSLADLKK----------KEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR 218 (476)
T ss_pred HHHHHHHHHHHHC----------CCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH
Confidence 4678888888885 345566677777777777776 2456788888888877777665
Q ss_pred cCC---CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEE
Q 037587 152 WRP---GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVS 227 (464)
Q Consensus 152 ~~~---g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~ 227 (464)
... +++++.++- -|++.|++.+++.. .+.+ +|++.+ -++.|.+.+ +++|.++|+++|+++|+
T Consensus 219 ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~---~~~~-~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiV 284 (476)
T PLN02955 219 LAERQGNVEVFVYRH-------CDMYHLNSLLSSCK---MKRK-VVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVI 284 (476)
T ss_pred hccccCCceEEEeCC-------CCHHHHHHHHHhCC---CCce-EEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEE
Confidence 431 366666652 37899999886531 2334 455555 799999987 66677777899999999
Q ss_pred eccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc-cc--CC
Q 037587 228 DEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS-SF--GL 304 (464)
Q Consensus 228 Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~--~~ 304 (464)
||+|+.+.++..+ ....+... -..+..++++||||++|..| ||+++++ .+.+.++... .+ .+
T Consensus 285 DEAH~~Gv~G~~G---~G~~e~~g--------~~~di~ii~~TLsKA~G~~G---Gfi~gs~-~~~~~l~~~~~~~ifSt 349 (476)
T PLN02955 285 DDAHGTFVCGENG---GGVAEEFN--------CEADVDLCVGTLSKAAGCHG---GFIACSK-KWKQLIQSRGRSFIFST 349 (476)
T ss_pred cccccCceecCCC---CcHHHHhC--------CCCCCcEEEEeCccchhccC---ceeecHH-HHHHHHHHhCCCCeecc
Confidence 9999976665431 12222211 02367899999999998777 9999854 4556555432 22 22
Q ss_pred CChH-HHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHH
Q 037587 305 VSSQ-TQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 305 ~s~~-~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
..++ ...++.+.+... . ....+++.+.++.+++.+. .|+.+ .+ ..+.+.+... ....++.++
T Consensus 350 alpp~~aaa~laal~l~---~-~~~~~r~~L~~n~~~fr~~---~G~~~---~s-PI~pI~ig~~------~~a~~~~~~ 412 (476)
T PLN02955 350 AIPVPMAAAAYAAVVVA---R-KEKWRRKAIWERVKEFKAL---SGVDI---SS-PIISLVVGNQ------EKALKASRY 412 (476)
T ss_pred cccHHHHHHHHHHHHHH---h-cCHHHHHHHHHHHHHHHHh---cCCCC---CC-CEEEEEeCCH------HHHHHHHHH
Confidence 2222 222222222211 1 1123556677776767663 36553 22 3444554431 233456677
Q ss_pred HHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 384 IIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|+ ++||.+.+...... .+...+||+++. .++++++.+++.|.++....+
T Consensus 413 L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 413 LL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred HH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 65 67999986654432 234579999977 799999999999988865443
No 210
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.85 E-value=6e-19 Score=175.34 Aligned_cols=290 Identities=15% Similarity=0.170 Sum_probs=171.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..++++.+|++++ . ++.+++++|+. ++..++..+.++||.|++..-.|......++...+ ..+.++
T Consensus 58 ~~~~e~~la~~~~--------~-~~~l~~~sG~~-a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~-~~~~~~--- 123 (370)
T PRK05937 58 LDDLEHKIAHFHG--------A-PEAFIVPSGYM-ANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISG-WHQSFR--- 123 (370)
T ss_pred HHHHHHHHHHHhC--------C-CeEEEECChHH-HHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCC-ceEEec---
Confidence 5678888888875 2 34466677664 45455556667888888877777666666654423 333332
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
..|++.|++.++.....+++..+|++++++|++|.+.| +++|.++|+++|+++++||+|+...++.. ...
T Consensus 124 ----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~---g~g 193 (370)
T PRK05937 124 ----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDD---GKG 193 (370)
T ss_pred ----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCc
Confidence 24789999988753222234556778899999999987 66778888899999999999985434322 111
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-Hhccc---CCCChHHHHHHHHHcCCch
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-KMSSF---GLVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-~~~~~---~~~s~~~q~~~~~~l~~~~ 321 (464)
. ...+ +..+..+++.||||.+|..|. | +++.++ +...+. ...++ ...+++...++.++++-
T Consensus 194 ~---~~~~------~~~~~~~~~~tlsK~~g~~G~--~-vl~~~~-~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~-- 258 (370)
T PRK05937 194 F---CHSL------GYENFYAVLVTYSKALGSMGA--A-LLSSSE-VKQDLMLNSPPLRYSTGLPPHLLISIQVAYDF-- 258 (370)
T ss_pred h---HHhh------CCCCCcEEEEechhhhhcCce--E-EEcCHH-HHHHHHHhCCCCeecCCCCHHHHHHHHHHHHH--
Confidence 1 1100 011223568999999997773 3 444333 333222 22222 12344444433333321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
+.+..+..++.+++.++++.+.|...+. +....+.++.. . ..++.. .|.++||.+.... . .
T Consensus 259 -l~~~~~~~~~~l~~l~~~l~~~l~~~~~-------~~~~~i~~~~~------~-~~~~~~-~L~~~gi~v~~~~--~-~ 319 (370)
T PRK05937 259 -LSQEGELARKQLFRLKEYFAQKFSSAAP-------GCVQPIFLPGI------S-EQELYS-KLVETGIRVGVVC--F-P 319 (370)
T ss_pred -HHhCcHHHHHHHHHHHHHHHHhcCCCCC-------CCEEEEEeCCh------h-HHHHHH-HHHHCCeeEEeeC--C-C
Confidence 1111223345566666667766643211 11112233311 1 123444 4567899887322 1 2
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 402 EPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..+++|++++. .++++++.+++.|++++++.+
T Consensus 320 ~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 320 TGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 34689999976 789999999999999998876
No 211
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.85 E-value=4.6e-19 Score=160.48 Aligned_cols=356 Identities=13% Similarity=0.198 Sum_probs=241.6
Q ss_pred CCCCCCCCCceEEeecccc------cccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHc
Q 037587 28 PYDQLHNPSGIIQMGLAEN------QLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIR 101 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 101 (464)
.|..+..|.. ++|+++.- |+..|.+++.-....+. -...+.|-|.-|.+.++++.++.+-
T Consensus 23 ~y~~d~~p~K-vnL~igAYRtd~g~PWvLPvVk~~e~~i~~d----------~s~NHEYLpi~Gl~~F~~~A~el~l--- 88 (410)
T KOG1412|consen 23 SYGEDLDPVK-VNLGIGAYRTDDGKPWVLPVVKKAEKKIAND----------QSLNHEYLPILGLPTFTKAATELLL--- 88 (410)
T ss_pred HhcccCCcce-eecccceEEcCCCCeeEehhhhhhhhhccCc----------hhccchhccccCchhhhhhhHHHhc---
Confidence 4666555555 77887622 23345555543332111 1224568888999999999998762
Q ss_pred CCCCC-CCCCcEE--EeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhcccCCC-cEEEEEecCCCCCcccCHH
Q 037587 102 GNKVK-FDPNKLV--LTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLKWRPG-VEIVPIHCSSSNGFRITIS 174 (464)
Q Consensus 102 ~~~~~-~~~~~i~--it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~ 174 (464)
|...+ +..+.+. -+-+++.++.....- ++ +...|.+..|+|..+...+... | ..+..++.-..+.-.+|++
T Consensus 89 g~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~-~~~~VY~SnPTW~nH~~if~~a-Gf~tv~~Y~yWd~~~k~~d~e 166 (410)
T KOG1412|consen 89 GADSPAIKEDRVFGVQSLSGTGALRIAADFLATFY-NKNTVYVSNPTWENHHAIFEKA-GFTTVATYPYWDAENKCVDLE 166 (410)
T ss_pred CCCchhhhhccccceeeccccchhhhhHHHHHHhc-ccceeEecCCchhHHHHHHHHc-CCceeeeeeeecCCCceecHH
Confidence 11111 2223321 234455555554433 33 3567999999999998888877 8 4566666544455678999
Q ss_pred HHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhcc
Q 037587 175 ALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDR 253 (464)
Q Consensus 175 ~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~ 253 (464)
.+.+.|+.+ +.-..+++... |||||.-.+.|++..|++..++.+.+.+.|-+|.++.-++.....+.+...+.
T Consensus 167 ~~Lsdl~~A----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~-- 240 (410)
T KOG1412|consen 167 GFLSDLESA----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVE-- 240 (410)
T ss_pred HHHHHHhhC----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHh--
Confidence 999988763 22233344444 99999999999999999999999999999999998654443223344444444
Q ss_pred CcCCCCCCCCcEEEEcCCCcCCCCCccEEEEE--EecCHHHHHHHHH------hcccCCCChHHHHHHHHHcCCchhhHH
Q 037587 254 NIDESDDLWSRIHIVYSLSKDFSMPGFRVGMI--YSNNERVVSAATK------MSSFGLVSSQTQYLLSRMLSDKKFTCN 325 (464)
Q Consensus 254 ~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l--~~~~~~~~~~~~~------~~~~~~~s~~~q~~~~~~l~~~~~~~~ 325 (464)
....++++.||+|.||+.+-|+|-+ +..++..+..+.. +..+.+++.....++...|..+++.++
T Consensus 241 -------~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~ 313 (410)
T KOG1412|consen 241 -------QGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQ 313 (410)
T ss_pred -------cCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHH
Confidence 2256889999999999999999987 3445444333221 223444566777889999999987555
Q ss_pred HHHH---HHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 326 YMKE---NRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 326 ~~~~---~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
|... +..++++.|..|++.|..++ |.-...+.|||-+-.|.. .....|.+++.|++.+
T Consensus 314 W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp-----------~qV~~li~~h~vyLl~---- 378 (410)
T KOG1412|consen 314 WIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP-----------AQVDHLIENHKVYLLS---- 378 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH-----------HHHHHHHHhceEEEec----
Confidence 5544 34567778888888887774 444456889998777653 2467788889999874
Q ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 399 HCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 399 ~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+| ||+++.++...++...++|.+.++..+
T Consensus 379 ----~G--RInisGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 379 ----DG--RINISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred ----CC--cEeeeccccccHHHHHHHHHHHHHhhc
Confidence 34 899988888889999999999887765
No 212
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.85 E-value=6.4e-19 Score=180.14 Aligned_cols=316 Identities=16% Similarity=0.141 Sum_probs=199.6
Q ss_pred ccccC---CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHH--HH-HhcCCCC----eEEEcCCCCCC
Q 037587 76 ELALF---QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETL--MF-CLADPGD----AFLLPTPYYPG 145 (464)
Q Consensus 76 ~~~~Y---~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~--~~-~l~~~gd----~Vlv~~p~y~~ 145 (464)
..+.| ....|..+++.++.+++.+.+| ++...+..++|+++.+..+ ++ .+.++|| +|++++|+|+.
T Consensus 98 ~~tpYq~e~~sqG~lel~~~~~~~la~l~G----~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~ 173 (481)
T PRK04366 98 ELHPLQPEETVQGALELMYELQEWLKEITG----MDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGT 173 (481)
T ss_pred cCCCCCChhhhhHHHHHHHHHHHHHHHHhC----CCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHh
Confidence 34556 3456888999999999998877 4555666677777666543 22 3456776 99999999999
Q ss_pred hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE
Q 037587 146 FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI 225 (464)
Q Consensus 146 ~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l 225 (464)
+...+... |++++.++++ .++.+|++.|++.+.+ ++++|++++|| |||.. ..++++|+++|+++|+++
T Consensus 174 ~~~~~~~~-G~~vv~v~~~--~~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~gal~ 241 (481)
T PRK04366 174 NPASAAMA-GFKVVEIPSN--EDGLVDLEALKAAVGE------DTAALMLTNPN-TLGLF--ERNILEIAEIVHEAGGLL 241 (481)
T ss_pred HHHHHHHc-CCEEEEeecC--CCCCcCHHHHHhhccc------CCeEEEEeCCC-Ccccc--chHHHHHHHHHHHcCCEE
Confidence 98888766 9999999985 3578999999988864 78899999997 99964 357999999999999999
Q ss_pred EEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHHHh--
Q 037587 226 VSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAATKM-- 299 (464)
Q Consensus 226 I~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~~~-- 299 (464)
++|.++.....+ . .+.. ..+..++++|.+|.||.| |-.+|++.++++ +.+.+...
T Consensus 242 iVD~a~~~~~~g-~----~~~~-------------~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~lp~~~v 302 (481)
T PRK04366 242 YYDGANLNAILG-K----ARPG-------------DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LAPFLPVPVV 302 (481)
T ss_pred EEEecChhhhcc-c----CCcc-------------ccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hHhhCCCCee
Confidence 999998522111 1 1111 225668889999998744 455788887543 32222100
Q ss_pred ----ccc---------------CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccE
Q 037587 300 ----SSF---------------GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGL 359 (464)
Q Consensus 300 ----~~~---------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~ 359 (464)
..+ ++.+.....++..++.... .+-+++..++...+.+++.+.|.+. .+.+..+...-
T Consensus 303 ~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G--~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~~~~~~~ 380 (481)
T PRK04366 303 EKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG--AEGLREVSEDAVLNANYLKARLKDIYDLPYDRPCMHE 380 (481)
T ss_pred eccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhHhhCcccCCCCeeEE
Confidence 000 0001111122222222211 2334444455556677888888775 33221111111
Q ss_pred EEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 360 FCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 360 f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+.++++.. .... ....++.++|. ++||.+. +..+.....+.+|++++. .++++++.+++.|+++.++..
T Consensus 381 -~~~~~~~~-~~~g-~~~~~v~~~L~-~~Gi~~~-~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 381 -FVLSGKKL-KETG-VRTLDIAKRLL-DYGFHPP-TIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred -EEEECccc-cccC-CCHHHHHHHHH-HCCccCC-ccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22333311 1111 12235666665 6799865 222322235689999976 689999999999999877665
No 213
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.85 E-value=7.5e-19 Score=173.79 Aligned_cols=215 Identities=14% Similarity=0.121 Sum_probs=154.8
Q ss_pred cCCCCC--CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----cc
Q 037587 79 LFQDYH--GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KW 152 (464)
Q Consensus 79 ~Y~~~~--g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~ 152 (464)
.|.... ....|+++||++.+ .+++++++|+++++..++.+++++||+|++++|.|+++...+ ..
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le~----------~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~ 123 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELEG----------GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKG 123 (394)
T ss_pred eecCCCCchHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhh
Confidence 465432 34699999998853 246899999999999999999999999999999998776532 33
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |+++..++.. +.+.+++.+.+ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+
T Consensus 124 ~-Gi~v~~v~~~-------~~e~l~~~l~~------~TklV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a 186 (394)
T PRK09028 124 F-GIETTYYDPM-------IGEGIRELIRP------NTKVLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWA 186 (394)
T ss_pred c-ceEEEEECCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCcc
Confidence 4 8888766532 34667777653 79999999999999887 679999999999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHh-ccc-CCCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKM-SSF-GLVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~-~~~-~~~s~~~ 309 (464)
.. +.-. + + ..+..+++.|.+|.+ |..++..|+++. ++.+.+.+... ... ..+++..
T Consensus 187 ~p-~~~~-----P---l-----------~~GaDivv~S~tK~l~Gh~d~~~G~~~~-~~~~~~~l~~~~~~~G~~~~p~~ 245 (394)
T PRK09028 187 SP-INSR-----P---F-----------EMGVDISIQAATKYIVGHSDVMLGTATA-NEKHWDQLREHSYLMGQCTSPDD 245 (394)
T ss_pred cc-ccCC-----c---c-----------ccCceEEEEeCCeEecCCCCEEEEEEEC-CHHHHHHHHHHHHhcCCCCCHHH
Confidence 42 1111 1 1 125678999999999 555688898776 44443333322 112 2356666
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
...+..-|+. +.-+.++..++...+.+.|+++
T Consensus 246 a~l~~rgl~T-------L~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 246 VYLAMRGLRT-------LGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred HHHHHcccCc-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 6655555544 4445566667778888889887
No 214
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6.9e-19 Score=174.81 Aligned_cols=216 Identities=19% Similarity=0.171 Sum_probs=148.8
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---ccCC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---KWRP 154 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~~ 154 (464)
.+|..+ ...+|++.+|++++ .+++++++|+++++..++.+++++||.|+++.|+|..+...+ ...
T Consensus 48 ~r~~np-~~~~lE~~lA~l~g----------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~- 115 (385)
T PRK08574 48 SREENP-TLRPLEEALAKLEG----------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKF- 115 (385)
T ss_pred ECCCCc-cHHHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhcc-
Confidence 344433 46889999999985 346788899999999999999999999999999999876554 333
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
|+++..+. +|++.+++.+.+ .++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+..
T Consensus 116 g~~v~~~~--------~d~~~l~~~i~~-----~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~ 179 (385)
T PRK08574 116 GVKVVLAY--------PSTEDIIEAIKE-----GRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATP 179 (385)
T ss_pred CcEEEEEC--------CCHHHHHHhcCc-----cCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcc
Confidence 77776553 357888877642 16899999999999999987 567888899999999999999632
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE-EEEEEecCHHHHHHHHHhcc-cC-CCChHHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR-VGMIYSNNERVVSAATKMSS-FG-LVSSQTQY 311 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR-iG~l~~~~~~~~~~~~~~~~-~~-~~s~~~q~ 311 (464)
+... .+ .. +..+++.|+||.++.+|-. .|++++.++.+.+.+..... ++ .++++...
T Consensus 180 -~~~~-----~l-~~-------------GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~ 239 (385)
T PRK08574 180 -LLYR-----PL-RH-------------GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAY 239 (385)
T ss_pred -ccCC-----hh-hh-------------CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 1111 11 11 4568899999999756655 47677656666555443332 22 24444343
Q ss_pred HHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 312 LLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+..-++. +..+.++..+....+.+.|+++
T Consensus 240 l~l~~l~t-------L~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 240 LVLRGLKT-------LEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHcccCc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 33333332 3333444455666777777765
No 215
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.85 E-value=1.9e-18 Score=173.23 Aligned_cols=336 Identities=13% Similarity=0.107 Sum_probs=203.1
Q ss_pred CCCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+. .|.+.+++.+..+ ....... ....+....+++.+.+..
T Consensus 27 ~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~-------------~~~~~~~-~~~~~~~~~la~~L~~~~-- 90 (397)
T TIGR03246 27 SRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQAD-------------KLWHIGN-GYTNEPVLRLAKKLVDAT-- 90 (397)
T ss_pred CEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHH-------------hcccccC-ccCCHHHHHHHHHHHhhC--
Confidence 34444556788999765 34443 4666666665422 1111111 111344455555554332
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCCeEEEcCCCCCChhhhcccCCCcE------------EEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA-------D-PGDAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~-------~-~gd~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~ 163 (464)
..+.+++++++++++..+++... . ....|+..+-+|++.........+.. +..++.
T Consensus 91 ----~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (397)
T TIGR03246 91 ----FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY 166 (397)
T ss_pred ----CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC
Confidence 24689999999999999998751 1 23567877777776543221111211 112221
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.|++.+++.+.+ ++++|++..++++.|... +.+.+++|.++|++||+++|.||+|.++...+. .
T Consensus 167 -------~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~--~ 231 (397)
T TIGR03246 167 -------NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE--L 231 (397)
T ss_pred -------CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc--c
Confidence 278888888753 677777764455556543 789999999999999999999999976422222 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~ 320 (464)
...... +...-+.|+||.+| .|+|+||++++ +.+.+.+.... ..+..+++++.++.+.++..
T Consensus 232 -~a~~~~-------------gv~pDi~t~~K~lg-gG~pigav~~~-~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~ 295 (397)
T TIGR03246 232 -YAYMHY-------------GVTPDILTSAKALG-GGFPIGAMLTT-TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLV 295 (397)
T ss_pred -hhhhhc-------------CCCCCEEEeehhhh-CCcceeEEEEc-HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 111111 11111338999998 89999999995 44555543321 11235677777777766532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCC----C-eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAG----I-RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g----~-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
+ .....+.++++.+++.+.|++++ + ...++. |.++.+.+..... .....++..++ ++||.+.+.
T Consensus 296 ~-----~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~----~~~~~~~~~l~-~~Gv~~~~~ 364 (397)
T TIGR03246 296 N-----TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGAVLTEAYQ----GKAKQFVNAAA-EEGVIALIA 364 (397)
T ss_pred h-----hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEEEEcCchh----hHHHHHHHHHH-HCCeEEeec
Confidence 1 12345566667777777776653 1 122233 4566666542110 12335666665 679998763
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 396 SSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+++++|++++. .+++++++++++|.+++++
T Consensus 365 ------g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 365 ------GPNVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 24689997765 7999999999999998865
No 216
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.85 E-value=2.8e-18 Score=174.45 Aligned_cols=360 Identities=13% Similarity=0.085 Sum_probs=204.0
Q ss_pred CCCCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.....+||+..+- ..+ ..|.+.+++.++.+. ...........+....+|+.+.+...
T Consensus 45 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-------------~~~~~~~~~~~~~~~~la~~L~~~~p 111 (451)
T PRK06918 45 GALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQ-------------YIHTGFNVMMYEPYIELAEKLAALAP 111 (451)
T ss_pred ccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHh-------------ccCccccccccHHHHHHHHHHHHhCC
Confidence 3455555667789987652 233 346677777664321 11111111123555666666654321
Q ss_pred CCCCCCC-CcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc-------------EEEEEecCCC
Q 037587 103 NKVKFDP-NKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHCSSS 166 (464)
Q Consensus 103 ~~~~~~~-~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~~~~ 166 (464)
... +.++++++++|++..+++... ....+|+....+|++....+....+. .+..+|....
T Consensus 112 ----~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (451)
T PRK06918 112 ----GSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYE 187 (451)
T ss_pred ----CCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCcc
Confidence 112 589999999999999988642 23357888888887765332211110 1222222100
Q ss_pred --CCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCC-HHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 167 --NGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMT-HQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 167 --~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
...... ++.+++.+.+. ....++. .++..|-... |.+++ .+.+++|.++|+++|+++|+||+|.++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iA-avi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~ 265 (451)
T PRK06918 188 YRRPEGLTEEQYDDFMIEEFKNFFISE-VAPETIA-AVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGF 265 (451)
T ss_pred ccccccCchHHHHHHHHHHHHHHHHhh-cCCCceE-EEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCc
Confidence 000111 11233322111 0122454 4555675544 66555 455999999999999999999999986
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYL 312 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~ 312 (464)
.+.+. +.+...+ . ..+. +.||||.++ +|+|+||+++++ .+.+.+.... ..+..++++|.+
T Consensus 266 gr~g~---~~a~~~~-~---------v~pD---i~t~sK~l~-~G~pig~v~~~~-~i~~~~~~~~~~~T~~g~~l~~aa 327 (451)
T PRK06918 266 ARTGK---YFAIEHF-D---------VVPD---LITVSKSLG-AGVPISGVIGRK-EIMDESAPGELGGTYAGSPLGCAA 327 (451)
T ss_pred CccCc---eehhHhc-C---------CCCC---EEeeehhhc-CCCccEEEEEcH-HHHhccCCCCcCcCCCcCHHHHHH
Confidence 54433 1222222 1 1122 449999999 999999999954 4444443221 223467788888
Q ss_pred HHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHh
Q 037587 313 LSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFE 387 (464)
Q Consensus 313 ~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~ 387 (464)
+.++++ ++.+ .++.+...+.+.++.+.+.+ +++ +....+.|+++.|...... ...++......+...+ .+
T Consensus 328 a~a~l~~i~~~~~-~~~~~~~g~~l~~~l~~l~~---~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 402 (451)
T PRK06918 328 ALAVLDIIEKENL-NDRAIELGKVVMNRFEEMKN---KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NK 402 (451)
T ss_pred HHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHh---hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HH
Confidence 665554 3333 44555555555544433332 232 2224456776666554211 0111112223344444 46
Q ss_pred cCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 388 VGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 388 ~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+||.+.|+..|+ +++||+++. ++++++++++++|.+++++.
T Consensus 403 ~Gvlv~~~~~~~----~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 403 RGLLLLSAGTYG----NVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred CCeEEeecCCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 899999986663 589999976 78999999999999999765
No 217
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.85 E-value=4.2e-19 Score=178.56 Aligned_cols=165 Identities=16% Similarity=0.189 Sum_probs=129.3
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~ 152 (464)
..+|+.+. ..+|++.+|++++ .+..++++++++++..++.+++++||+|+++.+.|++... .+..
T Consensus 51 ysr~~~p~-~~~le~~lA~l~g----------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~ 119 (418)
T TIGR01326 51 YSRLMNPT-TDVLEQRIAALEG----------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKR 119 (418)
T ss_pred eECCCChh-HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHH
Confidence 34555432 4788888888875 2457889999999999999999999999999999975433 2344
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++.+ |++++++.+.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+
T Consensus 120 ~-G~~v~~v~~~-------d~~~l~~~l~~------~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 120 L-GIEVRFVDPD-------DPEEFEKAIDE------NTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred c-CcEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCc
Confidence 5 9999888742 68889888764 7899999999999999875 6778888999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecC
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN 289 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~ 289 (464)
.. +... + + ..+.++++.|+||.+|.+|+|+||+++++
T Consensus 183 ~~-~~~~-----~---l-----------~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 183 TP-YLCR-----P---I-----------DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hh-hcCC-----c---h-----------hcCCeEEEECccccccCCccceEEEEEec
Confidence 32 1111 1 1 11567899999999998999999998854
No 218
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.85 E-value=1.4e-19 Score=166.04 Aligned_cols=351 Identities=15% Similarity=0.223 Sum_probs=242.6
Q ss_pred CCCCCCCCceEEeecccc------cccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 29 YDQLHNPSGIIQMGLAEN------QLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
|..+.+|.. |+|+++.. |+..+-++++-++... ......|-|..|.+++.+..+++.- |
T Consensus 46 fk~D~n~~K-iNLgvGaYRdd~gKp~vL~~VrkAE~ql~~-----------~~ldKEYlpI~Gl~eF~k~sakLa~---G 110 (427)
T KOG1411|consen 46 FKKDPNPKK-INLGVGAYRDDNGKPYVLPSVRKAEQQLAS-----------LSLDKEYLPITGLAEFNKLSAKLAL---G 110 (427)
T ss_pred HhcCCCcce-eeecccceecCCCCeeeeHHHHHHHHHHhh-----------hcccchhccccchHHHHHHHHHHhh---c
Confidence 566666665 89998733 3345666666555321 1233479999999999999999852 2
Q ss_pred CCCC-CCCCcEEE--eCChHHHHHHHHHH--hcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHH
Q 037587 103 NKVK-FDPNKLVL--TAGSTAANETLMFC--LADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALE 177 (464)
Q Consensus 103 ~~~~-~~~~~i~i--t~G~~~al~~~~~~--l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 177 (464)
...+ +....|+. +-++|.++.....- ..-++..|.+|+|+|......+... |+.+..+..-....-.+|.+.+.
T Consensus 111 ~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~a-g~~~~~yrYyd~~t~gld~~g~l 189 (427)
T KOG1411|consen 111 DNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDA-GLPVKFYRYYDPKTRGLDFKGML 189 (427)
T ss_pred CCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCcccccc-CcceeeeeeccccccccchHHHH
Confidence 2111 22334433 23445555544332 2347889999999999999888877 99887777544445678888888
Q ss_pred HHHHHHhhcCCceEEEEEeCC--CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 178 NAYQQAQTLNLKVKGVLITNP--SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 178 ~~i~~~~~~~~~~~~vil~~P--~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
+.+.++ ....+++.+. |||||.-.+.+++++|.++.++.+.+-+.|-+|.++.-+.......++.-++.
T Consensus 190 edl~~~-----p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~---- 260 (427)
T KOG1411|consen 190 EDLGEA-----PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE---- 260 (427)
T ss_pred HHHhcC-----CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH----
Confidence 877663 2233555554 99999999999999999999999999999999998544332112233333343
Q ss_pred CCCCCCCCcEEEEcCCCcCCCCCccEEEEE--EecCHHHHHH----HHH-hccc-CCCChHHHHHHHHHcCCchhhHHHH
Q 037587 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMI--YSNNERVVSA----ATK-MSSF-GLVSSQTQYLLSRMLSDKKFTCNYM 327 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l--~~~~~~~~~~----~~~-~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~ 327 (464)
...++++..||+|.+|+-|-|+|.+ ++.+.+.... ++. .+++ .+++.....++..+|.+++...+|.
T Consensus 261 -----~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~ 335 (427)
T KOG1411|consen 261 -----DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWL 335 (427)
T ss_pred -----cCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHH
Confidence 3367888899999999999999987 5554443332 222 2333 3344456778888999987766666
Q ss_pred HH---HHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 328 KE---NRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 328 ~~---~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
.+ +.+++...|..|.+.|+..| |..+..+-|||.+-.+.+ +....|.+++.|++.
T Consensus 336 ~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-----------eQv~~l~ke~~iYmT------- 397 (427)
T KOG1411|consen 336 GEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-----------EQVDWLTKEYHIYLT------- 397 (427)
T ss_pred HHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-----------HHHHHHHhhheeeec-------
Confidence 55 45677778888888888764 444566789999877763 356778889889875
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+| |||++.++...+..+.++|.++.+
T Consensus 398 -~dG--RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 398 -KDG--RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -cCc--eEeeccccccCCcccchhhHhHhc
Confidence 244 999988888888888888877654
No 219
>PLN02651 cysteine desulfurase
Probab=99.84 E-value=9.5e-20 Score=180.85 Aligned_cols=279 Identities=18% Similarity=0.231 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCChhhh---cccCCCcEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPGFDRD---LKWRPGVEIV 159 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~ 159 (464)
.++|+.++++++ +++++|++|+|+++++..++..+ .++||+|++....|+.+... +... |++++
T Consensus 46 ~~~r~~la~~~g--------~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~-g~~v~ 116 (364)
T PLN02651 46 EKARAQVAALIG--------ADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQE-GFEVT 116 (364)
T ss_pred HHHHHHHHHHhC--------CCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhc-CCEEE
Confidence 456667777664 67889999999999988877654 47899999998777654332 3334 89999
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.++.+. ++.+|++++++.+++ +++++++++++||||.+.+ +++|.++|+++|+++++|.+++. +..
T Consensus 117 ~v~~~~--~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~---g~~ 182 (364)
T PLN02651 117 YLPVKS--DGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV---GKI 182 (364)
T ss_pred EEccCC--CCcCCHHHHHHhcCC------CcEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhh---CCc
Confidence 998763 457899999998864 7899999999999999976 66788889999999999999973 222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--------cccCCCChHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--------SSFGLVSSQTQY 311 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~q~ 311 (464)
+ .++. ..+..+++.|.+|.+|.+| +|+++.+++......... ...++.+.....
T Consensus 183 --~-~~~~-------------~~~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~ 244 (364)
T PLN02651 183 --P-VDVD-------------DLGVDLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVV 244 (364)
T ss_pred --c-cCcc-------------cCCCCEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHH
Confidence 1 1211 2245678899999755334 898887554222110000 112334444445
Q ss_pred HHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeeecCCc-----cEEEEEecCcccccCChhHHHHHHHHH
Q 037587 312 LLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-A-GIRCLKSNA-----GLFCWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~~~~~-----g~f~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
++.++++.- .+..+..+++.++..+++.+.|++ . |++++.+.. ...+.+.++. . . ..++...|
T Consensus 245 ~l~~al~~~---~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~-~-----~-~~~~~~~L 314 (364)
T PLN02651 245 GLGAACELA---MKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY-V-----E-GESLLMGL 314 (364)
T ss_pred HHHHHHHHH---HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC-C-----C-HHHHHHHh
Confidence 555554321 223455667777788888888875 3 777775411 1144444442 1 1 22455555
Q ss_pred HHhcCeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHH
Q 037587 385 IFEVGLNISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQ 419 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~ 419 (464)
.+ |.++.|+.|... ..+.+|+|++. .|++|++
T Consensus 315 -~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 315 -KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred -CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 33 999988866543 13689999988 6777763
No 220
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=3.5e-20 Score=178.24 Aligned_cols=167 Identities=17% Similarity=0.267 Sum_probs=130.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
-..++++.+|++++ . .+.+++++|+++++..++.+++++||+|+++.|+|......+... |++++.++.+
T Consensus 60 ~i~~~~~~~A~~~g--------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~-g~~~~~v~~~ 129 (294)
T cd00615 60 PIKEAQELAARAFG--------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLS-GAVPVYLKPE 129 (294)
T ss_pred HHHHHHHHHHHHhC--------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHC-CCEEEEecCc
Confidence 36788899999886 2 344556999999999999999999999999999998888777766 9999988876
Q ss_pred CCCCc----ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc-ccCCC
Q 037587 165 SSNGF----RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT-VFDSP 239 (464)
Q Consensus 165 ~~~~~----~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~-~~~~~ 239 (464)
.+.+| .+|++.+++.+++ ++++++|++++| ||+|.+++ +++|+++|+++|+++|+||+|+.. .|.+.
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~ 201 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPI 201 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcc
Confidence 44433 6899999998864 347899999999 79999986 678899999999999999999743 23222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY 286 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~ 286 (464)
...+.. ..+.++++.|++|++ +|++.|+++
T Consensus 202 --~~~~~~-------------~~~~div~~S~hK~l--~g~~~~~~l 231 (294)
T cd00615 202 --LPSSAA-------------MAGADIVVQSTHKTL--PALTQGSMI 231 (294)
T ss_pred --cCcchh-------------hcCCcEEEEchhccc--chHhHHHHH
Confidence 111111 226788999999986 777776554
No 221
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=2.4e-18 Score=172.13 Aligned_cols=343 Identities=14% Similarity=0.088 Sum_probs=205.6
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. ...++.. -..+....+++.+.....
T Consensus 33 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-------------~~~~~~~-~~~~~~~~la~~L~~~~~-- 96 (408)
T PRK04612 33 RVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGK-------------LWHTSNV-FYSAPPLKLAEELVTASR-- 96 (408)
T ss_pred EEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHh-------------ccccccc-cCCHHHHHHHHHHHhhCC--
Confidence 4445566778998755 3333 346666666664321 1111111 123445566666653211
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC----C----C-CeEEEcCCCCCChhhhcccCCCcEEEE---EecCCC---CCc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD----P----G-DAFLLPTPYYPGFDRDLKWRPGVEIVP---IHCSSS---NGF 169 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~----~----g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~---v~~~~~---~~~ 169 (464)
..+.++++++++|++..+++.... . + .+|+....+|++....+....|..... -++.+. -.|
T Consensus 97 ---~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 173 (408)
T PRK04612 97 ---FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF 173 (408)
T ss_pred ---CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC
Confidence 126899999999999999876431 1 2 468998988887643322111211100 000000 011
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC--HHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT--HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s--~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~ 247 (464)
.|++.+++.+.. +..++++..|.+++|.+++ .+.+++|.++|+++|+++|+||+|.++...+. . ..
T Consensus 174 -~d~~~l~~~~~~------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~--~-~a-- 241 (408)
T PRK04612 174 -NDVEALEAAMAG------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT--L-FA-- 241 (408)
T ss_pred -CCHHHHHHhhCC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc--h-hh--
Confidence 267888877642 3445677789888887766 56899999999999999999999987433222 1 11
Q ss_pred hhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCchhhHH
Q 037587 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDKKFTCN 325 (464)
Q Consensus 248 ~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~ 325 (464)
.. ..+.+..+.||||.+| +|+|+||++++++ +.+.+... ...+..+++.+.++.+.|+.-+-
T Consensus 242 ~~-----------~~~~~pdi~t~~K~l~-~G~piga~~~~~~-~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--- 305 (408)
T PRK04612 242 HW-----------QEQVTPDIVTLAKALG-GGFPIGAMLAGPK-VAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--- 305 (408)
T ss_pred hh-----------hcCCCCCEEEEcchhc-CCCceEEEEECHH-HHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 11 1144566789999999 9999999998544 44444322 12234677888888777753211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC----CCe-eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVA----GIR-CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~----g~~-~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
....+.++++-+++.+.|+++ ++. ...+. |+++.+.+..... ....+++..+ .++||++.|.
T Consensus 306 --~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~~~i~~~~~~~----~~a~~i~~~l-~~~Gvlv~~~----- 372 (408)
T PRK04612 306 --PQIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLMLGAVLAPAHA----GQAGAILDLA-AEHGLLLLQA----- 372 (408)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceEEEEEecCchh----hHHHHHHHHH-HHCCeEEeeC-----
Confidence 122333344444444444443 322 22333 5677777742100 1122355554 5789999763
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 401 NEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 401 ~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+.+.+|+.... ++++++++++++|++++.+.
T Consensus 373 -g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 373 -GPDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred -CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24679999866 79999999999999998753
No 222
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.84 E-value=6.9e-18 Score=169.91 Aligned_cols=355 Identities=9% Similarity=0.066 Sum_probs=204.0
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...+.......+....+|+.+.+....
T Consensus 33 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~-------------~~~~~~~~~~~~~~~~la~~l~~~~p~- 98 (421)
T PRK09792 33 TLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQ-------------FTHTAYQIVPYESYVTLAEKINALAPV- 98 (421)
T ss_pred EEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHh-------------ccCcccCccCCHHHHHHHHHHHHhCCC-
Confidence 4444556778898654 2333 346666666664321 111111011234445566655432110
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc-------------EEEEEecCCCCCc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHCSSSNGF 169 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~~~~~~~ 169 (464)
...+.++++++++|++..+++... ....+|+....+|++....+....|. .++.+|..... .
T Consensus 99 --~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~ 175 (421)
T PRK09792 99 --SGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-H 175 (421)
T ss_pred --CCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-c
Confidence 112589999999999999988643 22357888888887754221111010 12222322111 0
Q ss_pred cc----CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 170 RI----TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 170 ~~----d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
.+ +++.+++.+++. ....++++|++.-.++|+|..+ |.+.+++|.++|+++|+++|+||++.++.+.+. . .
T Consensus 176 ~~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~--~-~ 251 (421)
T PRK09792 176 GISTQDSLDAIERLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGK--L-F 251 (421)
T ss_pred cccHHHHHHHHHHHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc--h-h
Confidence 11 235666655421 0124677766654489999866 899999999999999999999999998644333 1 2
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHH---cCC
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRM---LSD 319 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~---l~~ 319 (464)
....+ . ..++ +.||||.++ +|+|+||++++ +.+.+.+.. ....+..++++++++.+. +++
T Consensus 252 a~~~~-~--------~~pD----i~t~gK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~ 316 (421)
T PRK09792 252 AMDHY-A--------DKPD----LMTMAKSLA-GGMPLSGVVGN-ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK 316 (421)
T ss_pred HHHhc-C--------CCCc----EEEeehhhc-CCCceEEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh
Confidence 22111 1 0112 579999998 99999999984 445443321 122234677888855544 444
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHH-hCCCeeecCCc-cEEEEEecCcccc-cCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLK-VAGIRCLKSNA-GLFCWVDMRHLLV-SNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-g~f~~~~l~~~~~-~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
.++ +++.+ .+.++.....+.|. +++. +....| |+++|++++.... .........++..++ ++||.+.+..
T Consensus 317 ~~~----~~~~~-~~g~~l~~~l~~l~~~~p~-v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g 389 (421)
T PRK09792 317 ESL----CERAN-QLGQRLKNTLIDAKESVPA-IAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCG 389 (421)
T ss_pred hhH----HHHHH-HHHHHHHHHHHHHHHhCCC-cceecccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecC
Confidence 333 33333 22222222233332 2343 233455 8999999974311 111122334666665 5799996432
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
. ..+.+|+.++. ++++++++++++|.+++.
T Consensus 390 ~----~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 390 A----YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred C----CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 1 24689999887 899999999999999875
No 223
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.84 E-value=3.4e-18 Score=169.09 Aligned_cols=208 Identities=15% Similarity=0.122 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v~ 162 (464)
..|++.+|++.+ .+++++++|+++++..++.+++++||.|++++|.|+..... .... |+++..++
T Consensus 53 ~~lE~~lA~l~g----------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~-gi~v~~~d 121 (377)
T TIGR01324 53 FALQDAMCELEG----------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM-GVDITYYD 121 (377)
T ss_pred HHHHHHHHHHhC----------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc-CcEEEEEC
Confidence 588999998874 35789999999999999999999999999999999876543 2334 88877664
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.. +.+.+++.+++ ++|+|++.+|+||+|.. .++++|+++|+++|+++|+|++|+...+. .
T Consensus 122 ~~-------~~e~l~~~i~~------~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~-~--- 181 (377)
T TIGR01324 122 PL-------IGEDIATLIQP------NTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF-K--- 181 (377)
T ss_pred CC-------CHHHHHHhcCC------CceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc-C---
Confidence 32 22677776654 78999999999999887 67999999999999999999999843221 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcccC-CCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSFG-LVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~ 320 (464)
+ + ..+..++++|++|.+| .+++..|+++++++.+.........++ ..++.....+...++
T Consensus 182 --p---l-----------~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-- 243 (377)
T TIGR01324 182 --P---L-----------EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR-- 243 (377)
T ss_pred --c---c-----------ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh--
Confidence 1 1 1255688999999995 345788999885543333222233333 234443333333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+..+.++..++...+.+.|+++
T Consensus 244 -----tl~~R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 244 -----TLGVRLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhC
Confidence 23444555566666788888776
No 224
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=2.6e-18 Score=172.70 Aligned_cols=156 Identities=18% Similarity=0.227 Sum_probs=123.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v 161 (464)
...|.+.+|++.+ .+..++++|+++++..++.+++++||+|+++.+.|++... .+... |++++.+
T Consensus 66 ~~~Le~~lA~leg----------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~-Gv~v~~v 134 (431)
T PRK08248 66 TDVFEKRIAALEG----------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKL-GITVKFV 134 (431)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhC-CEEEEEE
Confidence 4677777887764 3467889999999999999999999999999999976433 23445 9999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.. |++.+++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.. +..
T Consensus 135 d~~-------d~e~l~~ai~~------~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~-~~~--- 194 (431)
T PRK08248 135 DPS-------DPENFEAAITD------KTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP-YLL--- 194 (431)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc-ccC---
Confidence 752 78888888754 7899999999999999987 567888888999999999998621 111
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~ 288 (464)
.++ . .+..+++.|++|.+|.+|.++|++++.
T Consensus 195 --~pl-~-------------~gaDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 195 --RPI-E-------------HGADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred --Chh-H-------------cCCCEEEEcCccccCCCCCceEEEEEe
Confidence 111 1 256688999999999999999998763
No 225
>PLN02624 ornithine-delta-aminotransferase
Probab=99.83 E-value=7.2e-18 Score=171.96 Aligned_cols=347 Identities=12% Similarity=0.088 Sum_probs=200.0
Q ss_pred CCCCCCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccc-cCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELA-LFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+|||..+.- .+ ..|.+.+++.+..+. ..... .|. .....+|.+.+++++
T Consensus 68 ~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~----------~~~~~~~~~-~~~~~~la~~L~~~~------ 130 (474)
T PLN02624 68 RIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEK----------LTLSSRAFY-NDKFPEFAEYLTSMF------ 130 (474)
T ss_pred EEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh----------cCCcccccC-CHHHHHHHHHHHhhc------
Confidence 444445667889876521 22 346666666664321 01011 111 112244445555442
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC---------CCC-eEEEcCCCCCChhhhcccCCCcE------------EEEE
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD---------PGD-AFLLPTPYYPGFDRDLKWRPGVE------------IVPI 161 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~---------~gd-~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v 161 (464)
..+.+++++++++++..+++.... ++. .|+...-+|.+....+....+-. +..+
T Consensus 131 ----~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~ 206 (474)
T PLN02624 131 ----GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKV 206 (474)
T ss_pred ----CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEe
Confidence 235899999999999999875432 122 57777777776532221111110 1112
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH-HHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE-LNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~-l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+. -|++.+++.++. .+.++.+|++..++|++|.++++++ +++|.++|++||+++|+||+|.++...+.
T Consensus 207 ~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~- 275 (474)
T PLN02624 207 DF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK- 275 (474)
T ss_pred CC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc-
Confidence 21 167888888753 2347888888888999999988775 99999999999999999999986433222
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~ 318 (464)
. ... .. .+ ..+. +.+|||.+|.+++++|++++++ .+...+..... .+..+++.+.++.+.|+
T Consensus 276 -~-~a~-~~-~~--------i~pD---iv~lsK~lggG~~pigav~~~~-~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe 339 (474)
T PLN02624 276 -M-LAC-DW-EE--------VRPD---VVILGKALGGGVIPVSAVLADK-DVMLCIKPGEHGSTFGGNPLASAVAMAALQ 339 (474)
T ss_pred -h-hhH-Hh-cC--------CCCC---EEEecccccCCCCcceeeeecH-HHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 1 111 11 10 1122 3347999996669999999854 44443332221 12356777777777664
Q ss_pred Cc---hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC
Q 037587 319 DK---KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 319 ~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
.. +. .++..++.+.++++.+.+...+.. .+....+.| .++.+.+..... ......+++..| .++||++.|+
T Consensus 340 ~l~~~~l-~~~~~~~~~~l~~~L~~l~~~~~~-~i~~vrg~G-~~~~i~l~~~~~--~~~~a~~~~~~L-~e~GV~v~p~ 413 (474)
T PLN02624 340 VVQDEKL-AERSAKLGQELRDQLQKIQKQFPK-LIKEVRGRG-LLNAVVLNSPKL--GPVSAYDVCLKL-KERGLLAKPT 413 (474)
T ss_pred HHHhchH-HHHHHHHHHHHHHHHHHHHHhCCC-ceEEEEeeE-EEEEEEecCCCc--ChHHHHHHHHHH-HhCCeEEecC
Confidence 21 11 222333333333332222222111 122233444 455555542110 012234566665 5789999876
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 396 SSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
. .+++||++.. ++++++++++++|++++++...+
T Consensus 414 ~------~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~ 448 (474)
T PLN02624 414 H------DTIIRLAPPLSISEDELQECSKALSDVLEHDLPK 448 (474)
T ss_pred C------CCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2 5689999754 79999999999999998776643
No 226
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2.9e-18 Score=170.01 Aligned_cols=208 Identities=17% Similarity=0.248 Sum_probs=143.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v 161 (464)
..+|++.+|++.+ . ...+++++| +.++..++ .++++||+|+++.|+|++... .+... |++++.+
T Consensus 52 ~~~Le~~lA~l~g--------~-~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~-G~~v~~v 119 (377)
T PRK07671 52 RAALEELIAVLEG--------G-HAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRF-GIEHTFV 119 (377)
T ss_pred HHHHHHHHHHHhC--------C-CceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcC-CeEEEEE
Confidence 4788888888875 2 345666666 46777665 578999999999999985433 23334 8898888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+. .|++.+++++++ ++++|++++|+||||.+. ++++|.++|+++|+++|+|++|....+. .
T Consensus 120 ~~-------~d~~~l~~ai~~------~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~-~-- 180 (377)
T PRK07671 120 DT-------SNLEEVEEAIRP------NTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQ-S-- 180 (377)
T ss_pred CC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence 63 278889888754 789999999999999985 5777888888999999999999743222 2
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~ 318 (464)
+ ..+ +..+++.|+||.+|-++ .-.|++++.++.+.+.+...+.. ...++.....+..-++
T Consensus 181 ---p-~~~-------------g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~ 243 (377)
T PRK07671 181 ---P-ISL-------------GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLK 243 (377)
T ss_pred ---h-hhh-------------CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC
Confidence 1 111 34588999999996332 45677777666666655554444 2244443333332222
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+..+.++..++...+.+.|+++
T Consensus 244 -------tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 244 -------TLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHHcC
Confidence 24445666677888888888876
No 227
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=4.5e-18 Score=168.82 Aligned_cols=288 Identities=16% Similarity=0.186 Sum_probs=182.2
Q ss_pred cCCCCCC--cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----ccc
Q 037587 79 LFQDYHG--FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKW 152 (464)
Q Consensus 79 ~Y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~ 152 (464)
.|....+ ..+|++.++++++ . ++++++++++.++..++. ++++||.|+++.+.|...... +..
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~g--------~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLDK--------A--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHH
Confidence 4554421 2455555555543 2 456667777789988776 789999999999999876543 333
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++.. |++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 109 ~-G~~v~~vd~~-------d~~~le~~i~~------~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 109 S-GVVVVHVDTT-------DLDKVKAALGP------KTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred c-CcEEEEeCCC-------CHHHHHHhcCc------CceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCc
Confidence 4 9999988753 68888888754 8899999999999999875 8888999999999999999985
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHhcc-cC-CCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKMSS-FG-LVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~~~-~~-~~s~~~ 309 (464)
.. +... ++ .+ +..+++.|++|.++- .+++.|+++++++.+.+.+..... .+ ..++..
T Consensus 172 ~~-~~~~-----~l-~~-------------g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~ 231 (378)
T TIGR01329 172 SP-LLCN-----PL-EL-------------GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFD 231 (378)
T ss_pred cc-ccCC-----hh-hc-------------CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHH
Confidence 32 1111 11 11 345889999998853 358899998866666554444333 22 234443
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eee-c---------------CCccEEEEEecCccccc
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCL-K---------------SNAGLFCWVDMRHLLVS 371 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~-~---------------~~~g~f~~~~l~~~~~~ 371 (464)
...+..-++. +..+.++..++...+.+.|+++ .+ .+. | ...|-.+.+.+. .
T Consensus 232 a~l~~~~l~t-------l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-~--- 300 (378)
T TIGR01329 232 CWLLLRGIKT-------LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-S--- 300 (378)
T ss_pred HHHHHccCCC-------HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-C---
Confidence 3333333322 3333444455556666666654 11 111 1 012234555552 1
Q ss_pred CChhHHHHHHHHHHHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 372 NTFEAEKELWKKIIFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 372 ~~~~~~~~l~~~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.....+++..| +..++.++-|..... -.++.+|+|++. |+.+.+++-|.++++
T Consensus 301 --~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 374 (378)
T TIGR01329 301 --VALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFV 374 (378)
T ss_pred --HHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHH
Confidence 12233566655 566777776665331 014689999995 556677777777776
Q ss_pred h
Q 037587 431 S 431 (464)
Q Consensus 431 ~ 431 (464)
+
T Consensus 375 ~ 375 (378)
T TIGR01329 375 T 375 (378)
T ss_pred h
Confidence 4
No 228
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.83 E-value=3.5e-18 Score=170.03 Aligned_cols=172 Identities=18% Similarity=0.296 Sum_probs=127.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
...+++++++++.+.++ .+++++++|+++++.+++.++ +++||+|+++.|+|..+...+... |++++.++++
T Consensus 29 ~~~~~~~~e~~la~~~g------~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~-G~~~v~~d~d 101 (375)
T PRK11706 29 DGGFTRRCQQWLEQRFG------SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR-GAKIVFVDIR 101 (375)
T ss_pred CCHHHHHHHHHHHHHhC------CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc-CCEEEEEecC
Confidence 35667777777766543 468999999999999887765 689999999999999998888777 9999999987
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCc
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSF 243 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~ 243 (464)
+ ++|.+|++++++.+.+ ++++|+++ |++|... ++++|.++|+++|+++|+|++|+... +.+.
T Consensus 102 ~-~~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~---~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~---- 164 (375)
T PRK11706 102 P-DTMNIDETLIEAAITP------KTRAIVPV---HYAGVAC---EMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---- 164 (375)
T ss_pred C-CcCCcCHHHHHHhcCC------CCeEEEEe---CCCCCcc---CHHHHHHHHHHcCCEEEEECccccccccCCe----
Confidence 5 3588999999998754 78888876 4689875 46778888999999999999998543 2222
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCC--cCCCCCccEEEEEEecCHHHHHHHHH
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLS--KDFSMPGFRVGMIYSNNERVVSAATK 298 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~S--K~~g~~GlRiG~l~~~~~~~~~~~~~ 298 (464)
.+..+ . .+.+.||+ |.++ +|.+.++++. ++.+.+.++.
T Consensus 165 -~~g~~-------------~-~~~~~Sf~~~K~l~-~g~gG~~~~~-~~~~~~~~~~ 204 (375)
T PRK11706 165 -ALGTI-------------G-HIGCFSFHETKNYT-AGEGGALLIN-DPALIERAEI 204 (375)
T ss_pred -eeecC-------------c-CEEEEeCCCCcccc-ccCCeEEEEC-CHHHHHHHHH
Confidence 11111 1 12334554 9997 6888777765 5555554443
No 229
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.83 E-value=8.8e-18 Score=168.90 Aligned_cols=337 Identities=15% Similarity=0.093 Sum_probs=202.4
Q ss_pred CCCCCCCCceEEeeccccc--c--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQ--L--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+--. + ..|.+.+++.+.... .......-...-..+|.+.+++++ +
T Consensus 30 ~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~~~----~-- 93 (401)
T TIGR01885 30 HVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQK----------LTLSSRAFYNDVFGEFAEYVTKLF----G-- 93 (401)
T ss_pred EEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHh----------ccccccccCCHHHHHHHHHHHhhc----C--
Confidence 4444455678999875221 2 346666666554221 011111001112244555555543 2
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---------CC-CCeEEEcCCCCCCh-hhhcccCCCc------------EEEEE
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA---------DP-GDAFLLPTPYYPGF-DRDLKWRPGV------------EIVPI 161 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~---------~~-gd~Vlv~~p~y~~~-~~~~~~~~g~------------~~~~v 161 (464)
.+.+++++++++++..++..+. .+ .+.|+...-+|++. ...+... +- .++.+
T Consensus 94 ----~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (401)
T TIGR01885 94 ----YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMS-TDPDSRTNFGPYVPGFKKI 168 (401)
T ss_pred ----CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCc-CCcccccccCCCCCCceEe
Confidence 3588999999999999998752 12 36788888887753 2322221 21 12222
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHH-HHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQ-ELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~-~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+. .|++.+++.+++. +.++.+|++..+++++|...+.+ .+++|.++|+++|+++|+||+|.++.+.+.
T Consensus 169 ~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~- 237 (401)
T TIGR01885 169 PY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK- 237 (401)
T ss_pred CC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-
Confidence 21 2688898888642 34677777776799999988654 699999999999999999999976433222
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-c-ccCCCChHHHHHHHHHcC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-S-SFGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~-~~~~~s~~~q~~~~~~l~ 318 (464)
. ... +. .+ ..+.++ ++||.++..|+|+|+++++ +.+.+.+... . ..+..+++.+.++.++|+
T Consensus 238 -~-~~~-~~-~~--------~~~di~---~~gK~l~~g~~~ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 238 -L-LCV-DH-EN--------VKPDIV---LLGKALSGGVYPVSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALE 301 (401)
T ss_pred -h-hHH-hh-cC--------CCCCEE---EeeccccCCCCCcEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 1 111 11 11 112333 5789998656999999995 4455544331 1 122346777877777765
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
... +. ...+.+++..+++.+.|++++..+ .++.| .+..+.++.... . ....+++..|. ++||.+.|+
T Consensus 302 ~i~--~~---~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g-~~~~i~~~~~~~--~-~~~~~l~~~l~-~~Gv~v~~~ 371 (401)
T TIGR01885 302 VLE--EE---KLAENAEKLGEIFRDQLKKLPKPIITEVRGRG-LLNAIVIDESKT--G-RTAWDLCLKLK-EKGLLAKPT 371 (401)
T ss_pred HHH--hc---cHHHHHHHHHHHHHHHHHhccCCceeEEeecC-eeEEEEeccCcc--h-hHHHHHHHHHH-hCCEEEEec
Confidence 321 11 223445556677888888774332 23444 455455543211 0 12345777765 679999875
Q ss_pred CCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 396 SSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
. ++.+||++.. ++++++++++++|++++
T Consensus 372 ~------~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 372 H------GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred C------CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 2 4689999865 79999999999999876
No 230
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=1e-17 Score=166.92 Aligned_cols=154 Identities=16% Similarity=0.223 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecC
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCS 164 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~ 164 (464)
.|.+++|++.+ ....+ ++++++.++..++.+++++||+|+++++.|+.... .+... |++++.++..
T Consensus 51 ~lE~~la~leg---------~~~~v-~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~-G~~v~~v~~~ 119 (397)
T PRK05939 51 ALEAKITKMEG---------GVGTV-CFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGL-GVEVTMVDAT 119 (397)
T ss_pred HHHHHHHHHhC---------CCeEE-EeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhc-CCEEEEECCC
Confidence 78888888764 22344 55555899999999999999999999999976533 34445 9999888752
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
|++++++.+.+ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|+.... +
T Consensus 120 -------d~e~l~~~l~~------~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~~------~- 176 (397)
T PRK05939 120 -------DVQNVAAAIRP------NTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPWL------F- 176 (397)
T ss_pred -------CHHHHHHhCCC------CCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCcccccc------c-
Confidence 68889888754 88999999999999988 5799999999999999999999863211 0
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~ 288 (464)
.. . ..+..+++.|+||.++..|.++|+++..
T Consensus 177 ~~--~-----------~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 177 RP--K-----------DVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred Cc--c-----------ccCCEEEEecCeecccCCCCeEEEEEec
Confidence 00 0 1256789999999998889999998774
No 231
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=2.9e-17 Score=165.25 Aligned_cols=359 Identities=11% Similarity=0.081 Sum_probs=205.5
Q ss_pred CCCCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.+...+||+..+. ..+ ..|.+.+++.++.+ .+..+.......+....+|+.+.+...
T Consensus 31 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p 97 (425)
T PRK07495 31 NAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLD-------------RFTHTCHQVVPYENYVRLAERLNALVP 97 (425)
T ss_pred ecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHh-------------hccCcccCccCCHHHHHHHHHHHHhCC
Confidence 3455556677889987652 223 34667777766432 111111111123445556666654321
Q ss_pred CCCCCC-CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC-------------cEEEEEecCCC
Q 037587 103 NKVKFD-PNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG-------------VEIVPIHCSSS 166 (464)
Q Consensus 103 ~~~~~~-~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g-------------~~~~~v~~~~~ 166 (464)
-. .+.++++++++|++..+++... ....+|+...-+|++.........| ..++.+|.+..
T Consensus 98 ----~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (425)
T PRK07495 98 ----GDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE 173 (425)
T ss_pred ----CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc
Confidence 11 2589999999999999988642 2335788888888775422111001 01233333211
Q ss_pred CCcccC----HHHHHHHHHHHhhcCCceEEEEEeCC--CCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 167 NGFRIT----ISALENAYQQAQTLNLKVKGVLITNP--SNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 167 ~~~~~d----~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
....+ ++.+++.+.+. ....++.+|++. | +| +| ..+|.+.+++|.++|+++|+++|+||+|.++...+.
T Consensus 174 -~~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~E-Pv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~ 249 (425)
T PRK07495 174 -LHGVSVEQSLAALDKLFKAD-VDPQRVAAIIIE-PVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK 249 (425)
T ss_pred -cccccHHHHHHHHHHHHHhc-cCCCceEEEEEC-CccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC
Confidence 11122 33344444320 112356666554 5 55 78 457999999999999999999999999987433222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHH-
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRM- 316 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~- 316 (464)
. .. . . ..+.+..+.||||.++ +|+|+|++++++ .+.+.+.. ....+..++++++++.+.
T Consensus 250 --~-~a---~-~---------~~gv~pDi~tlsK~l~-~G~pigav~~~~-~i~~~~~~~~~~~T~~~~pl~~aaa~a~l 311 (425)
T PRK07495 250 --L-FA---M-E---------HHEVAADLTTMAKGLA-GGFPLAAVTGRA-EIMDAPGPGGLGGTYGGNPLGIAAAHAVL 311 (425)
T ss_pred --c-ee---e-c---------ccCCCCCEEeehhhhc-CCccceEEEEcH-HHHhccCCCCcCCCCCCCHHHHHHHHHHH
Confidence 1 11 1 1 1133445789999998 999999999954 45444332 122234677787755444
Q ss_pred --cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc-cCChhHHHHHHHHHHHhcCeEEe
Q 037587 317 --LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV-SNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 317 --l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~-~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
+.+.++ .++.+++.+.++++.+.+.+. +......-.-|+++|+++..... .........+...++ ++||++.
T Consensus 312 ~~l~~~~l-~~~~~~~g~~l~~~L~~l~~~---~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~ 386 (425)
T PRK07495 312 DVIEEEDL-CERANQLGNRLKQRLASLRET---VPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILL 386 (425)
T ss_pred HHHHhchH-HHHHHHHHHHHHHHHHHHHhh---CCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEe
Confidence 444443 444555555555544433332 22111111237899999853211 111111223555554 6899997
Q ss_pred CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 394 PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++.. ..+.+||.... ++++++++++++|.+++++.+
T Consensus 387 ~~g~----~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 387 TCGV----HGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred ecCC----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 6422 13679999876 799999999999999997654
No 232
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=3.1e-17 Score=165.17 Aligned_cols=357 Identities=12% Similarity=0.053 Sum_probs=206.2
Q ss_pred CCCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.+...+||+..+ ...+ ..|.+.+++.++.+. . ....+.. ...+....+|+.+.+...
T Consensus 31 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~----------~-~~~~~~~--~~~~~~~~la~~l~~~~p 97 (421)
T PRK06777 31 NATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQ----------F-THTAYQI--VPYASYVTLAERINALAP 97 (421)
T ss_pred cCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhh----------c-ccccccc--cCChHHHHHHHHHHHhCC
Confidence 345555567788998765 2223 346666766664321 1 1111111 123344556666554321
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcE-------------EEEEecCCCC
Q 037587 103 NKVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVE-------------IVPIHCSSSN 167 (464)
Q Consensus 103 ~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~-------------~~~v~~~~~~ 167 (464)
. -..+.++++++++|++..+++... ....+|+...-+|++....+....+.. +..++... .
T Consensus 98 ~---~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~-~ 173 (421)
T PRK06777 98 I---DGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPN-E 173 (421)
T ss_pred C---CCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCc-c
Confidence 0 123689999999999999988642 223568888888887653332111210 11112111 0
Q ss_pred Ccc----cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 168 GFR----ITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 168 ~~~----~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
... -+++.+++.+.+. ....++.+|++.-..+..|. ++|.+.+++|.++|+++|+++|.||+|.++.+.+. .
T Consensus 174 ~~~~~~~~~~~~l~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~--~ 250 (421)
T PRK06777 174 LHGVSVEEALSSVERLFKAD-IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK--L 250 (421)
T ss_pred ccCcCHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc--h
Confidence 000 1245566655421 01235666555433677885 57899999999999999999999999997544332 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~ 320 (464)
.+...+ . ..+. +.+|||.+| +|+|+||++++ +.+.+.+.... ..+..+++++.++.+.|+..
T Consensus 251 -~~~~~~-~---------~~pD---iv~~sK~l~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~ 314 (421)
T PRK06777 251 -FAMEYY-D---------VKPD---LITMAKSLG-GGMPISAVVGR-AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVI 314 (421)
T ss_pred -hhhhhc-C---------CCCC---EEeeehhhc-CCCceEEEEEc-HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 121111 1 1122 237999999 99999999995 45555443221 22346788888888887532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC----C-CeeecCCccEEEEEecCccc-ccCChhHHHHHHHHHHHhcCeEEeC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVA----G-IRCLKSNAGLFCWVDMRHLL-VSNTFEAEKELWKKIIFEVGLNISP 394 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g-~~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~l~~~ll~~~gI~v~p 394 (464)
+ + +...+.++++.+++.+.|+++ + +....+.|.+| .+.+.... ......-...+...+ .++||++.|
T Consensus 315 ~---~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~ 387 (421)
T PRK06777 315 A---E--EKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMV-AVEFNDPQTGKPSPEFTRQYQRQA-LEEGLLLLS 387 (421)
T ss_pred H---h--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEE-EEEEecCccCCccHHHHHHHHHHH-HhCCeEEee
Confidence 1 1 233444555555566655543 2 23345666655 44443211 111111122344444 468999999
Q ss_pred CCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 395 GSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 395 g~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
+..|+ +++||++.. ++++++++++++|.+++.
T Consensus 388 ~~~~g----~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 388 CGVHG----NVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred cCCCC----CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 87653 589999965 799999999999999874
No 233
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.82 E-value=4e-18 Score=168.56 Aligned_cols=287 Identities=15% Similarity=0.168 Sum_probs=185.6
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
....++++.++++++ .+++++++|+++++..++.++ .++||+|+++.++|..+...+... |++++.++
T Consensus 18 ~~~~~~~~~la~~~~----------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~ 86 (352)
T cd00616 18 PKVREFEKAFAEYLG----------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLL-GATPVFVD 86 (352)
T ss_pred HHHHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCeEEEEe
Confidence 346899999999985 246788889999999999998 589999999999999888777766 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+++ ..+.+|++.+++.+.+ ++++|+++ ||+|...+ +++|.++|+++|+++|+|++++.......
T Consensus 87 ~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~~~~--- 150 (352)
T cd00616 87 IDP-DTYNIDPELIEAAITP------RTKAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGATYKG--- 150 (352)
T ss_pred cCC-CcCCcCHHHHHHhcCc------CCeEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCeECC---
Confidence 864 3678899999988743 78888877 46898765 66677888899999999999973211111
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCC--cCCCCCccEEEEEEecCHHHHHHHHHhcccC-----------------
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLS--KDFSMPGFRVGMIYSNNERVVSAATKMSSFG----------------- 303 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S--K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----------------- 303 (464)
.. + . . ...+.+.||+ |.++ +.+.|+++.+++.+.+.++......
T Consensus 151 -~~---~-~---------~-~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (352)
T cd00616 151 -RK---V-G---------T-FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNY 213 (352)
T ss_pred -EE---c-c---------c-CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeecc
Confidence 00 0 0 0 1224566766 8874 3356888887666655444322111
Q ss_pred CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC-----ccEEEEEecCcccccCChhHH
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN-----AGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-----~g~f~~~~l~~~~~~~~~~~~ 377 (464)
.++.+...++... .+.+++..++.++..+++.+.|.+. |+++..+. ....+.+.++.. .. ...
T Consensus 214 ~~~~~~aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~ 282 (352)
T cd00616 214 RLSEIQAAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE-AG---ESR 282 (352)
T ss_pred CcCHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc-CC---CCH
Confidence 0112211111111 1223445555567777888888875 77765322 123444445421 00 112
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCC--------------CC-------CCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 378 KELWKKIIFEVGLNISPGSSCHC--------------NE-------PGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~--------------~~-------~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
.++...| +++||.+........ .. .+.+|+++.. .++++++.++++|+
T Consensus 283 ~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 283 DELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 2455555 567997652111000 00 2579999987 79999999988873
No 234
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=7.6e-18 Score=169.16 Aligned_cols=157 Identities=21% Similarity=0.236 Sum_probs=120.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc---CCCcEEEEEe
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW---RPGVEIVPIH 162 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~~g~~~~~v~ 162 (464)
..+|++.||++.+ .+..++++++++++..++.+++++||+|+++.+.|++....+.. ..|+++..++
T Consensus 60 ~~~Le~~lA~l~g----------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 60 NDVLEQRVAALEG----------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred HHHHHHHHHHHhC----------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 4688888888864 23456778888999999999999999999999999865544321 1266666554
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
. .|++.+++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..
T Consensus 130 ~-------~d~e~le~ai~~------~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~-~~--- 189 (425)
T PRK06084 130 H-------DDIAALEALIDE------RTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL-CR--- 189 (425)
T ss_pred C-------CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-CC---
Confidence 2 378999998865 7899999999999999987 67788889999999999999973211 11
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~ 288 (464)
+ ..+ +..+++.|++|.+|.+|.++|.+++.
T Consensus 190 --p-~~~-------------gaDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 190 --P-FEH-------------GADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred --h-hhc-------------CCCEEEECchhcccccccceeEEEEe
Confidence 1 111 34588999999998889999987763
No 235
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=5.1e-18 Score=169.33 Aligned_cols=210 Identities=17% Similarity=0.169 Sum_probs=151.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
...|.+.+|++.+ ....+++++++.|+.+++.+++++||.|+++.++|.+.... +... |+++..+
T Consensus 63 v~~lE~~la~leg----------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~-Gi~v~~v 131 (432)
T PRK06702 63 LAAFEQKLAELEG----------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKL-GIDVTFF 131 (432)
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHC-CCEEEEE
Confidence 4677778888764 23578899999999999999999999999999999866554 4555 9998888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.. .+|++.+++++++ ++|+|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-.+
T Consensus 132 d~------~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~~----- 191 (432)
T PRK06702 132 NP------NLTADEIVALAND------KTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPYL----- 191 (432)
T ss_pred CC------CCCHHHHHHhCCc------CCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchhh-----
Confidence 53 3688999998865 8999999999999999976 88889999999999999999852111
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCc-----CCCCCccEE-----EEEEecCHHHH------------------
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSK-----DFSMPGFRV-----GMIYSNNERVV------------------ 293 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK-----~~g~~GlRi-----G~l~~~~~~~~------------------ 293 (464)
... + ..+-.|+++|+|| ..+++|+++ +|..++...+.
T Consensus 192 --~~p--l-----------~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 192 --CQA--F-----------EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred --CCh--h-----------hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 111 1 1245588999999 777888887 56554322211
Q ss_pred ----H-HHHHhcccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 294 ----S-AATKMSSFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 294 ----~-~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+ .......++ .++++....+...|+.- ..+.++..++...+.+.|+++
T Consensus 257 ~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl-------~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 257 AYIVKARVQLLRDYGNCMSPFNAYISNIGLETL-------HLRMERHSENALAVAKWLADH 310 (432)
T ss_pred hHHHHHHHHHHHHccCCCCHHHHHHHHhccCcH-------HHHHHHHHHHHHHHHHHHHhC
Confidence 0 111222232 46677777777777653 233334456777788888876
No 236
>PLN02509 cystathionine beta-lyase
Probab=99.82 E-value=1.1e-17 Score=168.42 Aligned_cols=218 Identities=15% Similarity=0.194 Sum_probs=148.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~ 153 (464)
..|... |. ..++++.+.+.+..+ .++.++++|+++++..++ .++++||.|+++.|.|+.+... +...
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~leg------~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~ 195 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLDK------ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHhC------CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHC
Confidence 346654 53 467888888776543 456677788889987665 5789999999999999987633 3345
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|++++.++. .|++++++.+.+ ++++|++++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 196 -G~~v~~vd~-------~d~e~l~~ai~~------~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~ 258 (464)
T PLN02509 196 -GVVVKRVNT-------TNLDEVAAAIGP------QTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMS 258 (464)
T ss_pred -CeEEEEeCC-------CCHHHHHHhCCc------CCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 888887753 267888887753 78999999999999987 6899999999999999999999864
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhccc-C-CCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSSF-G-LVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~~-~-~~s~~~q 310 (464)
..+ .. . + ..+..+++.|++|.++-+| +=.|++++.++.+.+.+...+.. . ..++...
T Consensus 259 ~~~-~~-----p---l-----------~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A 318 (464)
T PLN02509 259 PVL-SR-----P---L-----------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDC 318 (464)
T ss_pred ccc-CC-----h---h-----------hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHH
Confidence 322 11 1 1 1134588999999986433 44688876555544433322222 1 2344433
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.++..-|+ .+..+.++..+....+.+.|+++
T Consensus 319 ~l~lr~L~-------tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 319 WLCLRGIK-------TMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred HHHHhhhh-------hHHHHHHHHHHHHHHHHHHHhcC
Confidence 33333222 24556666677778888888876
No 237
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.82 E-value=1e-17 Score=169.15 Aligned_cols=347 Identities=12% Similarity=0.049 Sum_probs=203.6
Q ss_pred CCCCCCCCCceEEeeccc--cc--ccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLAE--NQ--LSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~--n~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+|||..+. +. +.+|.+.+++.+..+. ....|....+..+|.+.+++.+
T Consensus 42 ~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~------------~~~~~~~~~~~~~la~~L~~~~------ 103 (426)
T PRK00062 42 AYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK------------GLSFGAPTELEVELAELVIELV------ 103 (426)
T ss_pred CEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh------------CCcCCCCCHHHHHHHHHHHHhC------
Confidence 344445567889998763 22 2456677666654221 1112222223344444444442
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCc------------EEE-----EEecC
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGV------------EIV-----PIHCS 164 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~-----~v~~~ 164 (464)
...+.+++++++++++..+++.... .++.|+..+++|+++...+....|. ... .+...
T Consensus 104 ---~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (426)
T PRK00062 104 ---PSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP 180 (426)
T ss_pred ---CCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC
Confidence 1356899999999999999987532 3578999999999875322111010 000 01111
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
..|++.+++.+.+ ...++.+|++.....-+|.+.+ .+.+++|.++|++||+++|+||+|.++.++..
T Consensus 181 -----~~d~~~l~~~i~~---~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~---- 248 (426)
T PRK00062 181 -----YNDLEAVEELFEE---YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALG---- 248 (426)
T ss_pred -----CCCHHHHHHHHHh---CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCc----
Confidence 1268888887753 1236666666522344788775 77899999999999999999999987522211
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh---cc--cCCCChHHHHHHHHHcC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM---SS--FGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~---~~--~~~~s~~~q~~~~~~l~ 318 (464)
.. .+... . .++ +.+|||.+| .|+++|+++++ +.+.+.+... .. .+..+++.++++.+.|+
T Consensus 249 ~~-~~~~~-~-------~pD----i~~~gK~l~-~G~p~ga~~~~-~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 249 GA-QGYYG-V-------TPD----LTTLGKIIG-GGLPVGAFGGR-REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred cH-HHHhC-C-------Ccc----hHhhhhHhh-CCCcceeeeEH-HHHHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 11 11111 0 112 468999998 99999999884 4555555321 11 12356777777776665
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcccc-------cCChhHHHHHHHHHHHhcCe
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHLLV-------SNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~~~-------~~~~~~~~~l~~~ll~~~gI 390 (464)
--+- .+..++.++.....++.|.+.++++++... .+.| .++-+.+..... ..+......+...++ ++||
T Consensus 314 ~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G-~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv 390 (426)
T PRK00062 314 LLKE-PGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVG-SMFGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGV 390 (426)
T ss_pred HHhc-chHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEec-ceEEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCe
Confidence 3211 123444444444455555555555665542 3444 455555532110 001111234666665 6799
Q ss_pred EEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 391 NISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 391 ~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+.|.. .+.+++++. ++++++++++++|++++.+.
T Consensus 391 ~v~~~~------~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 391 YLAPSQ------FEAGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EeecCC------cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 998742 124677754 69999999999999998753
No 238
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=1.9e-17 Score=163.58 Aligned_cols=212 Identities=16% Similarity=0.159 Sum_probs=143.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
.++.++++++.+....+ .++.+ +++++++|+..++.+++++||.|+++.|.|+++... ++.. |+++..+
T Consensus 62 gnPt~~~Le~~la~le~-----~~~~v-~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~-Gi~v~~v 134 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-----SAGTI-LVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRL-GVEVEYY 134 (395)
T ss_pred CChHHHHHHHHHHHHhC-----CCCEE-EECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhc-CeEEEEe
Confidence 35666666666654322 33444 555578999999999999999999999999987643 3445 9988887
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ +.+.+++++++ ++++|++++|+||++.. .++++|+++|+++|+++|+|++|....+-
T Consensus 135 d~~-------~~e~l~~al~~------~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~---- 194 (395)
T PRK05967 135 DPE-------IGAGIAKLMRP------NTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF---- 194 (395)
T ss_pred CCC-------CHHHHHHhcCc------CceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec----
Confidence 532 34677777754 78999999999998755 78999999999999999999999753221
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHH-hcccC-CCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATK-MSSFG-LVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~-~~~~~-~~s~~~q~~~~~~l~ 318 (464)
... ..+..+++.|.+|.++ -.++-.|+++.++ .+.+.+.. ....+ .+++.....+..-++
T Consensus 195 ---~pl-------------~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~-~~~~~l~~~~~~~G~~~~p~da~l~~rgl~ 257 (395)
T PRK05967 195 ---RPL-------------DFGVDISIHAATKYPSGHSDILLGTVSANE-KCWPQLLEAHGTLGLCAGPDDTYQILRGLR 257 (395)
T ss_pred ---Chh-------------HcCCCEEEEecccccCCCCCeeEEEEEcCH-HHHHHHHHHHHHcCCCCCHHHHHHHHcCcc
Confidence 111 1255688999999973 3457789777643 33332322 22222 345554444333333
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
. +.-+.++..++...+.+.|+++
T Consensus 258 T-------l~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 258 T-------MGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 3 4444555566777788888876
No 239
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.82 E-value=9.2e-18 Score=167.15 Aligned_cols=283 Identities=23% Similarity=0.298 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC-CcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChh----hhcccCCCcEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFD----RDLKWRPGVEI 158 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~~g~~~ 158 (464)
.+.|+.++++++ +++ ++|++++|+++++..++.++ +++|++|++..-.|++.. ...+.. |+++
T Consensus 46 ~~~r~~la~~lg--------~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~-g~~v 116 (371)
T PF00266_consen 46 EEAREALAKLLG--------APPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRK-GAEV 116 (371)
T ss_dssp HHHHHHHHHHHT--------SSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHT-TEEE
T ss_pred HHHHHHHHHhcC--------Cccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccc-hhhh
Confidence 467777788776 667 89999999999999999999 789999999999887655 223344 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
..++.+.+ ..+|++.+++.+.+ ++++|+++..+|-||..+| +++|.++|+++|+++++|.+++ ++.
T Consensus 117 ~~i~~~~~--~~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~---~g~ 182 (371)
T PF00266_consen 117 RVIPADPG--GSLDLEDLEEALNP------DTRLVSISHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQS---AGC 182 (371)
T ss_dssp EEEEEGTT--SSCSHHHHHHHHHT------TESEEEEESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTT---TTT
T ss_pred cccccccc--chhhhhhhhhhhcc------ccceEEeecccccccEEee---eceehhhhhccCCceeEechhc---ccc
Confidence 99988643 35789999999965 8999999999999999987 6678888889999999999997 332
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-----------------
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS----------------- 301 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~----------------- 301 (464)
. + ..+. ..+..+++.|..|.+|.+| +|+++.+++. .+.++....
T Consensus 183 ~--~-id~~-------------~~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~ 243 (371)
T PF00266_consen 183 V--P-IDLD-------------ELGADFLVFSSHKLGGPPG--LGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYGLAD 243 (371)
T ss_dssp S--S---TT-------------TTTESEEEEESTSTTSSST--EEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHCHHS
T ss_pred c--c-cccc-------------ccccceeeecccccCCCCc--hhhheehhhh-hhccccccccccccccccchhccccc
Confidence 2 1 2211 2255678999999556556 7999985543 333321110
Q ss_pred ----c--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec----CCccEEEEEecCcccc
Q 037587 302 ----F--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK----SNAGLFCWVDMRHLLV 370 (464)
Q Consensus 302 ----~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~----~~~g~f~~~~l~~~~~ 370 (464)
+ ++.+.+...++..+++.-. +.-+++.+++..+..+++.+.|.+. ++.+.. ...+..+.+.++.. .
T Consensus 244 ~~~~~~~GT~~~~~~~~l~~al~~~~--~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~ 320 (371)
T PF00266_consen 244 DARRFEGGTPNVPAIYALNEALKLLE--EIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS-D 320 (371)
T ss_dssp TTTGSSSSS--HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS-S
T ss_pred ccccccccceeeehhhhHHHHHhhhh--ccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC-C
Confidence 1 1333444444444443321 3335566677788888889999887 445532 22233555555421 1
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeec-CCHHHHHHH
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFAN-ITEETLQVA 421 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~-~~~e~l~~~ 421 (464)
..++...| +++||.+..|..+.. ...+.+|+|++. .++++++++
T Consensus 321 ------~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 321 ------ADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp ------HHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ------HHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 12355555 556999998776541 123789999988 788998864
No 240
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=5.5e-18 Score=168.70 Aligned_cols=171 Identities=13% Similarity=0.230 Sum_probs=130.9
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
...+|++++|++++ . ++++.++|+++++.+++.++ +++||+|+++.|+|..+...+... |++++.+++
T Consensus 34 ~~~~le~~la~~~g--------~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~v~vd~ 102 (379)
T PRK11658 34 KNQALEQAFCQLTG--------N--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVLL-GATPVMVDV 102 (379)
T ss_pred hHHHHHHHHHHHhC--------C--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHHc-CCEEEEEec
Confidence 46899999999986 2 36788999999999999998 799999999999999888777766 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc-ccCCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT-VFDSPSSS 242 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~-~~~~~~~~ 242 (464)
++ ++|.+|++.+++.+.+ ++++|+ |+||+|...+ +++|.++|+++|+++|+|++|+.. .+.+.
T Consensus 103 ~~-~~~~~d~~~l~~~i~~------~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~--- 166 (379)
T PRK11658 103 DR-DTLMVTPEAIEAAITP------RTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKGR--- 166 (379)
T ss_pred CC-CcCCcCHHHHHHhccc------CCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECCe---
Confidence 75 4577899999998864 788776 5567998764 677888999999999999999832 22221
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~ 299 (464)
.+ . ..+. .+.||++...+++.+.|+++.+++.+.+.++.+
T Consensus 167 --~~----g---------~~g~--~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~ 206 (379)
T PRK11658 167 --HI----G---------ARGT--AIFSFHAIKNITCAEGGLVVTDDDELADRLRSL 206 (379)
T ss_pred --ec----C---------CCCC--EEEeCCCCCcCcccCceEEEECCHHHHHHHHHH
Confidence 11 1 1122 356776555556678899988767766555443
No 241
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.81 E-value=1.8e-18 Score=160.48 Aligned_cols=288 Identities=17% Similarity=0.266 Sum_probs=178.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC------CCeEEEcCCCCCChhhhcccCCCcEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP------GDAFLLPTPYYPGFDRDLKWRPGVEIV 159 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~------gd~Vlv~~p~y~~~~~~~~~~~g~~~~ 159 (464)
.++|.+.|.+.++..-+ ...+.-.|++++|++++++.++.+|... --.|+...|.|+.|....... .-...
T Consensus 45 s~eL~~~Ir~LH~~VGN--Avt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f-~s~~y 121 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGN--AVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFF-DSRLY 121 (363)
T ss_dssp -HHHHHHHHHHHHHH-S--B--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT--BTTE
T ss_pred cHHHHHHHHHHHHHhcc--ccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhc-cccCc
Confidence 48899999998876533 2235558999999999999999998533 147999999999988776544 32223
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.+.-|. ..|. +- .++..-.=++++||||.|.+ .+.++ ...+..+|.|-+|. +.
T Consensus 122 ~w~Gda-~~~~-~~------------~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYY---WP-- 174 (363)
T PF04864_consen 122 KWAGDA-SNFK-NS------------DNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYY---WP-- 174 (363)
T ss_dssp EEEEEC-CCGT-T-------------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT----ST--
T ss_pred cccccH-Hhhc-cC------------CCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeee---cc--
Confidence 333221 1221 10 01122223899999999987 45555 34567789999996 32
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHc
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRML 317 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l 317 (464)
.+.++-. ..+..|.+.|+||.-|-+|-|+||.+..++.+.+.+.++...+ .+|.-+|.-+..+|
T Consensus 175 --hyTpI~~------------~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiL 240 (363)
T PF04864_consen 175 --HYTPITA------------PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKIL 240 (363)
T ss_dssp --TTS---S-------------B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHH
T ss_pred --cccccCC------------CCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 2222211 1156678899999999999999999998888877776654333 36777887777666
Q ss_pred CC----chh---hHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eeecCCccEEEEEecCcccccCChh
Q 037587 318 SD----KKF---TCNYMKENRKRLRKRKEMLVSGLKVAG-I--------------RCLKSNAGLFCWVDMRHLLVSNTFE 375 (464)
Q Consensus 318 ~~----~~~---~~~~~~~~~~~~~~~~~~l~~~l~~~g-~--------------~~~~~~~g~f~~~~l~~~~~~~~~~ 375 (464)
+. .+. .....+--++.+++|...|.+.+..-+ + ++..|.. -|.|+++.....
T Consensus 241 k~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psP-afAWlkCe~eed----- 314 (363)
T PF04864_consen 241 KVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSP-AFAWLKCEREED----- 314 (363)
T ss_dssp HHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSCGG-----
T ss_pred HHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCC-CeEEEecCCccc-----
Confidence 52 100 002455667788888899999887642 1 1222233 499999985321
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
+-|...|++.||.-+.|..|+. ++.|+|||+-. ++++++.++++|.++
T Consensus 315 ---~DC~~~l~~~~I~tr~G~~fga-~~ryVRlSml~-~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 315 ---EDCYAVLREAKIITRSGVLFGA-DSRYVRLSMLK-RDDDFDQLLERLSKL 362 (363)
T ss_dssp ---SSHHHHHHCTTEEEEEGGGGTS--TTEEEEESSS--HHHHHHHHHHHHCC
T ss_pred ---ccHHHHHHhCCcccCCCCccCC-CCCeEEEeccC-CHHHHHHHHHHHHhh
Confidence 1367778899999999999986 57799999974 899999999999764
No 242
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.81 E-value=2.2e-17 Score=163.74 Aligned_cols=208 Identities=18% Similarity=0.225 Sum_probs=137.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
...|++.+|++.+ ....+++++| +.++..++ .++++||+|++++|.|++.... +... |+++..+
T Consensus 52 ~~~Le~~la~l~g---------~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~-gi~v~~v 119 (380)
T PRK06176 52 RFALEELIADLEG---------GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKN-GLSCTII 119 (380)
T ss_pred HHHHHHHHHHHhC---------CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhc-CeEEEEc
Confidence 4678888888875 2334656555 55887666 5679999999999999755432 3334 8888777
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+. .|++.+++++++ ++++|++.+|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .
T Consensus 120 d~-------~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~-- 180 (380)
T PRK06176 120 DT-------SDLSQIKKAIKP------NTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N-- 180 (380)
T ss_pred CC-------CCHHHHHHhcCc------CceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence 64 268888887754 7899999999999999975 667888899999999999999853222 2
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~ 318 (464)
++ .+ +..+++.|++|.++.+| .-.|++++.++.+.+.+...+... ..++.....+..-++
T Consensus 181 ---p~-~~-------------gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~ 243 (380)
T PRK06176 181 ---PL-LL-------------GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK 243 (380)
T ss_pred ---cc-cc-------------CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC
Confidence 11 11 34578899999996554 456777775555555444433332 234444333333332
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
. +..+.++..+....+.+.|+++
T Consensus 244 t-------l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 244 T-------LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred c-------HHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2333334445556667777765
No 243
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.80 E-value=4.8e-17 Score=159.90 Aligned_cols=325 Identities=16% Similarity=0.186 Sum_probs=214.3
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-cccCCCcE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-LKWRPGVE 157 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~~g~~ 157 (464)
.|.......+|.++++++++ .+.++.+++++.|+.++....++|||.| +.++|...... +... |+.
T Consensus 66 ~yag~~s~~~lE~~va~~~G----------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~-Gav 132 (450)
T TIGR02618 66 AYAGSRNFYHLERTVRELYG----------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKN-GAT 132 (450)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhC-CeE
Confidence 48777778999999999986 4579999999999998887788999977 66777433333 4545 887
Q ss_pred EEEEecCC--------CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCC-CCCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 158 IVPIHCSS--------SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNP-LGTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 158 ~~~v~~~~--------~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NP-tG~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
++.++.++ ...+.+|++.+++.|++. ...++++|.+.+++|- .|..+|.++++++.++|+++|+.+|+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~--~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~D 210 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV--GADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYD 210 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 76665431 234778999999999741 1124557888888884 589999999999999999999999999
Q ss_pred cccccc--ccC---CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecCHHHHHHHHHhcc-
Q 037587 229 EIYSGT--VFD---SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNNERVVSAATKMSS- 301 (464)
Q Consensus 229 eay~~~--~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~~~~~~~~~~~~~- 301 (464)
.+.... .|- .++..-.++.+++.++ ..-...++.|..|.++.+ | |+++..++.+.+..+....
T Consensus 211 aAR~~gNA~~I~~re~g~~~~~i~ei~~e~-------~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~ 280 (450)
T TIGR02618 211 ATRCVENAYFIKEREQGYEDKSIAEILKEM-------MSYADGCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVV 280 (450)
T ss_pred ccchhhChhhhhcccccccCCCHHHHHHHH-------hccCcEEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhh
Confidence 988631 120 0100113443333332 112234788999998766 5 7777677777766655421
Q ss_pred ------cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccc---ccC
Q 037587 302 ------FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLL---VSN 372 (464)
Q Consensus 302 ------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~---~~~ 372 (464)
++..+.-...+++..|...-- ..+.++.. ...++|.+.|.+.|+++..|.+|.-++++....+ ...
T Consensus 281 ~eG~~tyGgla~r~~~ala~gL~e~~~-~~y~~~r~----~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~ 355 (450)
T TIGR02618 281 FEGMPSYGGLAGRDMEAMAIGIREAVD-YEYIEHRV----KQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQD 355 (450)
T ss_pred cCCccccCchhhhhHHHHHHHHHHhhh-HHHHHHHH----HHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChh
Confidence 122232233333333332110 12233222 2356788889888999977777778999875432 112
Q ss_pred ChhHHHHHHHHHHHhcCeEEe-CCCCCCCCC----------CCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 373 TFEAEKELWKKIIFEVGLNIS-PGSSCHCNE----------PGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~-pg~~f~~~~----------~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
. .....++..|..+.||--. -|+...... -..+|+++.. -|.+.++...++|..+.++...
T Consensus 356 ~-~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 356 Q-FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred h-ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 2 2344678888888898754 333211111 2479999976 4889999999999998877663
No 244
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.80 E-value=5.3e-17 Score=163.50 Aligned_cols=275 Identities=13% Similarity=0.132 Sum_probs=175.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CeEEEcCCCCCChhh----hcccCCCcEE----EEEecCCCCCcccCHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPG---DAFLLPTPYYPGFDR----DLKWRPGVEI----VPIHCSSSNGFRITISA 175 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~g---d~Vlv~~p~y~~~~~----~~~~~~g~~~----~~v~~~~~~~~~~d~~~ 175 (464)
+++++|++|+|+++++..++.+++++| +.|++....|+.... .++.. |+++ +.++.+ .++.++++.
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~g~~~~~~ 160 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLTVEESMVQIEPR--EEETLRLED 160 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhc-CCCcccceEEeccC--CCCccCHHH
Confidence 688999999999999999999887664 368888888987322 23344 8776 455543 345678899
Q ss_pred HHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 176 LENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
+++.++. .++++++|++++++|.||..++ +++|.++|+++|+++++|++++ ++.. + .++.
T Consensus 161 l~~~~~~---~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~---~G~~--~-id~~-------- 220 (406)
T TIGR01814 161 ILDTIEK---NGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA---VGNV--P-LDLH-------- 220 (406)
T ss_pred HHHHHHh---cCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc---cCCc--c-cccc--------
Confidence 9888753 1347899999999999999986 7778888999999999999998 3322 1 2211
Q ss_pred CCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcc------------------------cCCCChHHH
Q 037587 256 DESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSS------------------------FGLVSSQTQ 310 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~------------------------~~~~s~~~q 310 (464)
..+..+++.|.+|+++ -+| .|..+. ++........... .++.+....
T Consensus 221 -----~~gvD~~~~s~hK~l~g~pG--~~l~v~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~ 292 (406)
T TIGR01814 221 -----DWGVDFACWCTYKYLNAGPG--AGAFVH-EKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSV 292 (406)
T ss_pred -----cCCCCEEEEcCccccCCCCC--eEEEEe-hhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHH
Confidence 2256788999999873 345 443333 3222111100000 122333343
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeeecCC----ccEEEEEecCcccccCChhHHHHHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-----GIRCLKSN----AGLFCWVDMRHLLVSNTFEAEKELW 381 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----g~~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~l~ 381 (464)
.++.++++.-. +.-+++.+++.+...+++.+.|.+. |+++..+. .+..+.+.++ .. ..++.
T Consensus 293 ~~l~~al~~~~--~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~------~~~~~ 362 (406)
T TIGR01814 293 AALRGSLDIFD--QAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VP------GKAVF 362 (406)
T ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CC------HHHHH
Confidence 44443443211 1113455566666777777777664 36665432 1224555555 11 12455
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHH
Q 037587 382 KKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 382 ~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l 429 (464)
..| .++||.+... .++.+|||+ +. .++++++.++++|++++
T Consensus 363 ~~L-~~~gi~v~~~------~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 363 QAL-IKRGVIGDKR------EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHH-HHCCEEEecc------CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 555 5679987532 246899998 44 79999999999998865
No 245
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=1.7e-16 Score=159.68 Aligned_cols=282 Identities=14% Similarity=0.082 Sum_probs=172.7
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh-hhhccc-CCCcEE--EEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF-DRDLKW-RPGVEI--VPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~-~~g~~~--~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
+.+++++.|+..++.+++++||.|+++..+|.+. ...+.. ..+... ..++.+. ..+.+|++++++.+.. .
T Consensus 94 v~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~-----~ 167 (416)
T PRK13034 94 VQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKE-----H 167 (416)
T ss_pred EecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhh-----c
Confidence 4567889999999999999999999999998762 222221 002222 2333332 2456899999988754 1
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
++++|++..+. +|... ++.+|.++|+++|+++|+|++++-..+... .... . .....+++
T Consensus 168 ~~klVi~~~~~--~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~g--~~~~--~------------~~~~Di~~ 226 (416)
T PRK13034 168 KPKLIIAGFSA--YPREL---DFARFREIADEVGALLMVDMAHIAGLVAAG--EHPN--P------------FPHAHVVT 226 (416)
T ss_pred CCeEEEECCCc--ccccc---CHHHHHHHHHHcCCEEEEeCcccccCcccC--CCCC--C------------CCCceEEE
Confidence 56877776554 45554 567777889999999999999874333221 1000 0 11345788
Q ss_pred cCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCC-hHHHHHHH-HHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVS-SQTQYLLS-RMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s-~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
.|++|.++.+. -|++++.++.+...++...... ..+ +....++. +++.. +.....+.++++.++.++|.+.
T Consensus 227 ~s~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~---~~~~~~~~~~~l~~~a~~l~~~ 301 (416)
T PRK13034 227 TTTHKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEA---LQPEFKTYAKQVIANAQALAEV 301 (416)
T ss_pred EeCcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHH---hChhHHHHHHHHHHHHHHHHHH
Confidence 99999993232 3888886666655544432211 111 12222221 22211 1111234567788888999999
Q ss_pred HHhCCCeeec--CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC----CCCCCeEEEEeec-----C
Q 037587 345 LKVAGIRCLK--SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH----CNEPGWFRICFAN-----I 413 (464)
Q Consensus 345 l~~~g~~~~~--~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~----~~~~~~~Ris~~~-----~ 413 (464)
|.+.|+++.. +++ ..+++.+...... . ..+...|+++||.+.+..... +..+..+|++++. .
T Consensus 302 L~~~G~~~~~~~~~t-~i~~v~~~~~~~~-----~-~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~ 374 (416)
T PRK13034 302 LKERGYDLVSGGTDN-HLLLVDLRPKGLS-----G-KDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGF 374 (416)
T ss_pred HHHcCCEeccCCCCC-cEEEEEcCCCCCC-----H-HHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCC
Confidence 9988998864 343 4666766532111 1 234445567899997421111 1124579999754 3
Q ss_pred CHHHHHHHHHHHHHHHHhhC
Q 037587 414 TEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 414 ~~e~l~~~l~~l~~~l~~~~ 433 (464)
++++++++++.|++++.+.+
T Consensus 375 ~~~di~~l~~~l~~~~~~~~ 394 (416)
T PRK13034 375 GEAEFREIANWILDVLDDLG 394 (416)
T ss_pred CHHHHHHHHHHHHHHHhcCC
Confidence 58999999999999988654
No 246
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=3.9e-17 Score=163.03 Aligned_cols=295 Identities=14% Similarity=0.108 Sum_probs=184.8
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
....+++++++++++ . ++.++++|+++++.+++.++ +++||.|+++.|+|..+...+... |++++.++
T Consensus 29 ~~~~~le~~la~~~g--------~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~-G~~~~~~~ 97 (380)
T TIGR03588 29 PTVPAFEEALAEYVG--------A--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYC-GAKVDFVD 97 (380)
T ss_pred hhHHHHHHHHHHHHC--------C--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHc-CCEEEEEe
Confidence 346899999999986 2 34566778999999999998 789999999999999888777766 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSS 241 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~ 241 (464)
+++ +.+.+|++.+++.+++. ..+++++|+++ |++|... ++++|.++|+++|++||+|++++... +.+.
T Consensus 98 ~~~-~~~~~d~~~l~~~i~~~--~~~~t~~v~~~---~~~G~~~---~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~-- 166 (380)
T TIGR03588 98 IDP-DTGNIDEDALEKKLAAA--KGKLPKAIVPV---DFAGKSV---DMQAIAALAKKHGLKIIEDASHALGAEYGGK-- 166 (380)
T ss_pred cCC-CcCCcCHHHHHHHhhcc--cCCCceEEEEe---CCCCccC---CHHHHHHHHHHcCCEEEEECCCcccCccCCE--
Confidence 875 35779999999988621 01267887765 5689775 47788889999999999999998431 2222
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCC--cCCCCCccEEEEEEecCHHHHHHHHHhcccC----------------
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLS--KDFSMPGFRVGMIYSNNERVVSAATKMSSFG---------------- 303 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S--K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~---------------- 303 (464)
.... . + ...+.+.||+ |.++. | ..|+++..++.+.+.++.+....
T Consensus 167 ~~g~----~-~----------~~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 229 (380)
T TIGR03588 167 PVGN----C-R----------YADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPW 229 (380)
T ss_pred eCCC----c-c----------ccceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcc
Confidence 1110 0 0 1135566775 88863 3 46888887777766554432111
Q ss_pred -----------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-C---ccEE-EEEecC
Q 037587 304 -----------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS-N---AGLF-CWVDMR 366 (464)
Q Consensus 304 -----------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~-~---~g~f-~~~~l~ 366 (464)
.++.+..+.+...|. .+++..+.-++..+++.+.|.+. ++.+..+ . .+++ ..+.++
T Consensus 230 ~~~~~~~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~ 302 (380)
T TIGR03588 230 YYEQQELGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLD 302 (380)
T ss_pred eeeeeccccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEEC
Confidence 011111111111121 13334444455556677777765 3443322 1 1222 223333
Q ss_pred cccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-------C--C---C-------CCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 367 HLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-------C--N---E-------PGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-------~--~---~-------~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
.. . . ....++...| +++||.++.....- . . . ...+++.+.. .++++++.+++.|+
T Consensus 303 ~~-~--~-~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 303 QE-F--G-CTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred Cc-C--C-CCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 21 0 0 1122455655 67899887432110 0 0 0 1458887765 78999999999998
Q ss_pred HHH
Q 037587 427 VFA 429 (464)
Q Consensus 427 ~~l 429 (464)
+++
T Consensus 378 ~~~ 380 (380)
T TIGR03588 378 KVL 380 (380)
T ss_pred HhC
Confidence 864
No 247
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=5.2e-17 Score=156.00 Aligned_cols=208 Identities=17% Similarity=0.240 Sum_probs=152.3
Q ss_pred CCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhccccccccccc-CC--CCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 33 HNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELAL-FQ--DYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++.+.+.|+.+.-...++.+.+++....... + .+-... |. ...+..+.|+.||++++ .++
T Consensus 39 ~~~~~~vyld~~at~p~~~~Vldam~~~~~~~-~-------~nPh~~~y~w~~~~~~E~aR~~VAklIn--------Ad~ 102 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATGPMDPRVLDAMLPYLLEY-L-------GNPHSRSYGWKAEDAVEAAREQVAKLIN--------ADP 102 (428)
T ss_pred cCCCccEEEecCcCCCCCHHHHHHHHHHHHHh-h-------cCCCccccchhhhHHHHHHHHHHHHHhC--------CCC
Confidence 45567788876644334455555555432110 0 001111 22 22236788999999987 788
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-CCC----eEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLAD-PGD----AFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~-~gd----~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
.+|++|+|+||+++++++.+.. .+| .|++..-.|+..... +... |++++.+|.+ ++...|++.+++.|+
T Consensus 103 ~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~-g~~Vt~lpv~--~~~~~d~~~~~~~i~ 179 (428)
T KOG1549|consen 103 SDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEE-GLEVTYLPVE--DSGLVDISKLREAIR 179 (428)
T ss_pred CcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhc-CeEEEEeccC--ccccccHHHHHHhcC
Confidence 8899999999999999998743 456 888888888765444 4445 8999999987 345679999999997
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
. ++++|.+...+|-+|+++| +++|+++|++.++.+++|.+++ .+.- ..++.++
T Consensus 180 ~------~T~lv~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQa---vG~i---~vDV~el------------ 232 (428)
T KOG1549|consen 180 S------KTRLVSIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQA---VGKI---PVDVQEL------------ 232 (428)
T ss_pred C------CceEEEEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhh---cCCc---cccHHHc------------
Confidence 6 9999999999999999987 6668899999999999999998 4432 2454444
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecC
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNN 289 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~ 289 (464)
+..++..|.+|+||.+| +|++++++
T Consensus 233 -n~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 233 -NADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred -CchheeeecccccCCCc--ceEEEEcc
Confidence 45567789999999999 99999864
No 248
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.79 E-value=7.7e-17 Score=160.62 Aligned_cols=308 Identities=15% Similarity=0.141 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC-CcEEEeCChH-HHHHHHHHHhcC---CCCeEEEcCCCCCChhhhcccCCCcEEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP-NKLVLTAGST-AANETLMFCLAD---PGDAFLLPTPYYPGFDRDLKWRPGVEIVPI 161 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~-~~i~it~G~~-~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v 161 (464)
..+...+.+.+.+..| ++. ...++++|+| .++.+++.++-. +||.|+++.-+|.....++... |++++.+
T Consensus 104 ~~l~~~~e~~~~~~~G----~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~-G~~pv~V 178 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLG----LRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTA-GFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHcC----CCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHc-CCeEEEe
Confidence 3444444444444444 332 3578888888 588777776642 5899999999998888888877 9999999
Q ss_pred ec-CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HC-SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++ ..++.|.+|+++++++|.+. +++..++++++|+ ||.....+++++|.++|+++|+++|+|++|+.. ..
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~---~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~---~~- 249 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEI---GPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQ---SN- 249 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhc---cCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCc---Ch-
Confidence 95 23467999999999999742 2245566777675 555556689999999999999999999999842 11
Q ss_pred CCccchhhhhh-ccCcCCCCCCCC-cEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcC
Q 037587 241 SSFISIMEAVM-DRNIDESDDLWS-RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 241 ~~~~~~~~l~~-~~~~~~~~~~~~-~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~ 318 (464)
....+.. .. ..+ ..+++.|++|.+.++|. .|.++++++.+.+.+.........+++.|.+...++.
T Consensus 250 ----~~~~~~~~g~-------~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~ 317 (444)
T TIGR03531 250 ----KYMELINKAI-------KVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLS 317 (444)
T ss_pred ----hhhhhhhccc-------cccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHH
Confidence 1111111 00 111 25667899999988776 3444476776766666543333345577777777775
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCcc-EEEEEecCcccccCChhHHHHHHHHHHHhcCeE--
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAG-LFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN-- 391 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g-~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~-- 391 (464)
.+ .+.+++..+...++++++.+.|.++ |.++.....| .-+-+.+.... .. +...+-. +|..++|.
T Consensus 318 ~G---~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~---~~~~~g~-~l~~~~v~g~ 389 (444)
T TIGR03531 318 LG---SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GK---DPTMLGS-MLYSRRVTGP 389 (444)
T ss_pred hC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-cc---CHHHHHH-HHHhCCCCCc
Confidence 43 3556777777777778888777664 6777654333 22334443221 11 1223333 44455662
Q ss_pred --EeCCC-------C---CCCCCC----CeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 392 --ISPGS-------S---CHCNEP----GWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 392 --v~pg~-------~---f~~~~~----~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
|.||. . |+...+ .|+=++.+. +++++++.++++|.++
T Consensus 390 r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 390 RVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred eeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 45666 2 222111 144443332 6899999999999875
No 249
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=2.2e-16 Score=159.99 Aligned_cols=358 Identities=11% Similarity=0.030 Sum_probs=197.2
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. ....+...-..+....+++.+.+...
T Consensus 36 ~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~-------------~~~~~~~~~~~~~~~~la~~L~~~~~-- 100 (433)
T PRK08117 36 YYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADK-------------LMHGPSGVIYYESILKLAEELAEITP-- 100 (433)
T ss_pred EEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh-------------ccCccccccCCHHHHHHHHHHHHhCC--
Confidence 4444456678998776 3344 346677766664221 11111000113444555555544321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC--------c-----EEEEEecCCCC--
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG--------V-----EIVPIHCSSSN-- 167 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g--------~-----~~~~v~~~~~~-- 167 (464)
-..+.+++++++++++..+++... ....+|+...-+|++.........+ . .+..+|.....
T Consensus 101 --~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (433)
T PRK08117 101 --GGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRC 178 (433)
T ss_pred --CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccc
Confidence 124589999999999999988632 2235788888888765432110001 0 11222221100
Q ss_pred Ccc--------cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 168 GFR--------ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 168 ~~~--------~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
.+. -+++.+++.+++.. ...++.+|++.-...-.|.+ .+.+.++++.++|++||+++|+||+|.++...+
T Consensus 179 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G 257 (433)
T PRK08117 179 PKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTG 257 (433)
T ss_pred cccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 000 13455555554211 12356555554334556765 478889999999999999999999999743322
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRM 316 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~ 316 (464)
. .+.. +.. +...-+.||||.+| +|+++|++++++ .+.+.+.... ..+..++++++++.+.
T Consensus 258 ~--~~~~--~~~------------gv~pDi~t~sK~lg-~G~pigav~~~~-~i~~~~~~~~~~~T~~~np~~~aaa~a~ 319 (433)
T PRK08117 258 E--WFAA--QTF------------GVVPDIMTIAKGIA-SGLPLSAVVASK-ELMEQWPLGSHGTTFGGNPVACAAALAT 319 (433)
T ss_pred c--chhH--hhc------------CCCCCEeehhhhcc-CCCcceeEEEcH-HHHhhccCCCCCCCCCcCHHHHHHHHHH
Confidence 2 1111 111 11222469999999 999999999854 4444433211 1123577888887777
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEE
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v 392 (464)
|+.-+- . ...+.+++..+++.+.|++ +++.......|+++++.+..............+...+ .++||.+
T Consensus 320 L~~l~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~ 393 (433)
T PRK08117 320 LEVIKE-E----KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKC-LEKGLLF 393 (433)
T ss_pred HHHHHh-c----cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHH-HHCCCEE
Confidence 663210 1 1122222333333333333 3332223345678888875321111112223455555 4679998
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+... ..+++|++++. .+++++++++++|.+++++.
T Consensus 394 ~~~g~----~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 394 YLCGN----AGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred eecCC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 76421 24689999754 79999999999999998754
No 250
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=2.8e-16 Score=156.73 Aligned_cols=351 Identities=9% Similarity=0.052 Sum_probs=209.4
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
..|+|-..||..++.. .+++....... -.+| .....-|.......++.....+...+.++ .+..||-.-+
T Consensus 50 ~~l~LiasEN~~s~~v-~~a~~s~l~nk--yaeg---~pg~ryy~g~~~~d~ie~l~~~ra~~lf~----a~~anvqp~S 119 (493)
T PRK13580 50 SSLKLIASENYSSLAV-QLAMGNLLTDK--YAEG---TPGHRFYAGCQNVDTVEWEAAEHAKELFG----AEHAYVQPHS 119 (493)
T ss_pred cCceEecccccCCHHH-HHHhccccccc--CcCC---CCCccccCCCchHHHHHHHHHHHHHHHhC----CCcccccCCC
Confidence 4488888888776543 33322210000 0000 00111233334445566556666666665 5666777766
Q ss_pred ChHHHHHHHHHHhcCC-------------------------------CCeEEEcCCCCCChhhhc---ccC-CCcEEEEE
Q 037587 117 GSTAANETLMFCLADP-------------------------------GDAFLLPTPYYPGFDRDL---KWR-PGVEIVPI 161 (464)
Q Consensus 117 G~~~al~~~~~~l~~~-------------------------------gd~Vlv~~p~y~~~~~~~---~~~-~g~~~~~v 161 (464)
|+. ++..++.++++| ||+|+..++..+++.... ... ...+++.+
T Consensus 120 g~~-An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y 198 (493)
T PRK13580 120 GAD-ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSY 198 (493)
T ss_pred cHH-HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEec
Confidence 655 666667788766 899999988776653321 111 02456666
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+++.+ ...+|++++++.+.+ +++.|+++..+|-.+ .. ++++|.++|+++|+++++|+++.-..++..
T Consensus 199 ~vd~~-~g~iD~d~l~~~~~~------~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~-- 265 (493)
T PRK13580 199 GVDPD-TGLLDYDEIAALARE------FKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGK-- 265 (493)
T ss_pred ccCcc-cCccCHHHHHHHHhh------cCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccc--
Confidence 66643 346899999999876 566778887777644 54 477778888899999999999986555433
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--CCChHHHHHHHHHcCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG--LVSSQTQYLLSRMLSD 319 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~ 319 (464)
........ .....++++|++|++ .|-+.|+++++ +.+.+.+....++. +..++..++++..+..
T Consensus 266 ~~~~~~~~-----------~~~~D~vtgT~hKaL--~GP~GG~I~~~-~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 266 VFTGDEDP-----------VPHADIVTTTTHKTL--RGPRGGLVLAK-KEYADAVDKGCPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred cchhhcCC-----------CCCCcEEEeCChhhc--cCCCeEEEEec-HHHHHHHhhCCCcccCCCccHHHHHHHHHHHH
Confidence 11100000 113457899999998 33345999985 44555554434332 1112222222222221
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
......++.++++.++.+.|.+.|.+.|+.+... ..+..+++++.... .....+...|.+.||.+.+-...
T Consensus 332 --~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~------~~g~~a~~~L~e~GI~vn~i~~P 403 (493)
T PRK13580 332 --ARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG------LTGRQAESALLDAGIVTNRNSIP 403 (493)
T ss_pred --HhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH------HHHHHHHHHHHHCCeEEccccCC
Confidence 1011124457778888899999999999987532 22357888886421 11224555667889999754322
Q ss_pred C-CCC---CCeEEEEeec-----CCHHHHHHHHHHHHHHHHhhC
Q 037587 399 H-CNE---PGWFRICFAN-----ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 399 ~-~~~---~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. +.+ ...+||++.. .++++++.+++.|.++++...
T Consensus 404 tvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~ 447 (493)
T PRK13580 404 SDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTT 447 (493)
T ss_pred CCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhh
Confidence 2 122 4679999865 247999999999999987653
No 251
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=2.9e-16 Score=151.55 Aligned_cols=304 Identities=18% Similarity=0.256 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFD-PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
..+-+.+.+.+...++ .+ .+-++++.+++.+++.++.+++.|||+||+...+..+ +...++.. |++++.+..
T Consensus 37 ~~~~~~~~~~L~~v~~----t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~~-g~~v~~~~~ 111 (383)
T COG0075 37 VGIMKEVLEKLRKVFG----TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAERY-GAEVVVLEV 111 (383)
T ss_pred HHHHHHHHHHHHHHhc----CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHHh-CCceEEEeC
Confidence 4444444555555444 33 3556777889999999999999999999999888543 23445555 999999887
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.. +-.++++++++++++ ++++++|.+++.-.+||... ++++|+++|++||.++|+|.+-+ +++. ++
T Consensus 112 ~w--g~~v~p~~v~~~L~~----~~~~~~V~~vH~ETSTGvln---pl~~I~~~~k~~g~l~iVDaVsS---~Gg~--~~ 177 (383)
T COG0075 112 EW--GEAVDPEEVEEALDK----DPDIKAVAVVHNETSTGVLN---PLKEIAKAAKEHGALLIVDAVSS---LGGE--PL 177 (383)
T ss_pred CC--CCCCCHHHHHHHHhc----CCCccEEEEEeccCcccccC---cHHHHHHHHHHcCCEEEEEeccc---CCCc--cc
Confidence 63 446899999999974 45788999999999999996 57778999999999999999887 6655 21
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHH---------------h----cccC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATK---------------M----SSFG 303 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~---------------~----~~~~ 303 (464)
. + +.++..+++.+--|.++. || +|.+..+++.+...... + ..++
T Consensus 178 -~----v---------d~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~ 241 (383)
T COG0075 178 -K----V---------DEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPY 241 (383)
T ss_pred -c----h---------hhcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCC
Confidence 1 1 245788899999999974 46 67777755443332111 1 1123
Q ss_pred CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ccEEEEEecCcccccCChhHHHHH
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN---AGLFCWVDMRHLLVSNTFEAEKEL 380 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~l 380 (464)
+++.....++..+|+.-. .+-++.+.+++++..+.+++.++.+|++.+... ..-...+.+|...+. . +.
T Consensus 242 Tppv~~i~aL~~al~~i~--~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~-----~-~~ 313 (383)
T COG0075 242 TPPVNLIYALREALDLIL--EEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDD-----K-KV 313 (383)
T ss_pred CCCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCc-----H-HH
Confidence 344444555556655422 445778888999999999999999999887622 222344556654332 1 23
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 381 WKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 381 ~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
...+++++||.+.+|.. ......|||+.-. .+.+++..++.+|..++.+.+..
T Consensus 314 ~~~~~~~~g~~i~gg~~--~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~ 367 (383)
T COG0075 314 RRALLKEYGVEIAGGQG--PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVK 367 (383)
T ss_pred HHHHHHhCCEEeccccc--ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCc
Confidence 44778888999987753 3345789998855 78999999999999999999863
No 252
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.78 E-value=3.4e-16 Score=157.20 Aligned_cols=357 Identities=15% Similarity=0.086 Sum_probs=203.7
Q ss_pred CCCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...... .....+.+..+|+.+.+...
T Consensus 26 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~----------~~~~~~---~~~~~~~~~~lae~l~~~~~ 92 (412)
T TIGR02407 26 GSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLAD----------DGIIHS---LDMATEAKREFLETFNEIIL 92 (412)
T ss_pred cCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhh----------ccceec---cccCcHHHHHHHHHHHHhcc
Confidence 345555566788998765 3333 346677777664221 001111 11124555666666654210
Q ss_pred CCCCCCCCcEEE-eCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC------------cEEEEEecCCCC
Q 037587 103 NKVKFDPNKLVL-TAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHCSSSN 167 (464)
Q Consensus 103 ~~~~~~~~~i~i-t~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~~ 167 (464)
.+... .+.+++ +++++|++..+++... ....+|+....+|++....+....| ..++.+|.....
T Consensus 93 ~~~~~-~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~ 171 (412)
T TIGR02407 93 KPRGL-DYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL 171 (412)
T ss_pred CccCC-CceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcc
Confidence 00001 124656 5899999999988743 2236789888888876533221111 122233321100
Q ss_pred Cc-ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc-
Q 037587 168 GF-RITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI- 244 (464)
Q Consensus 168 ~~-~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~- 244 (464)
.. .-+++.+++.+.+......++.+|++.-..++.|. ..|.+.+++|.++|+++|+++|+||++.++ +..+..+.
T Consensus 172 ~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~--GRtG~~~a~ 249 (412)
T TIGR02407 172 GGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC--GRTGTFFSF 249 (412)
T ss_pred ccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC--CccchhHHh
Confidence 00 01356677766532111125666665433788898 578889999999999999999999999863 32210110
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHH---HHH-Hc
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYL---LSR-ML 317 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~---~~~-~l 317 (464)
....+ . +. +.+|||.+| + |+|+|+++++++ + ..+... ...+..++++..+ +.. ++
T Consensus 250 ~~~~v-----------~-PD---i~~~~K~lg-~~G~pigav~~~~~-~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i 311 (412)
T TIGR02407 250 EPAGI-----------E-PD---IVCLSKSIS-GYGLPLALTLIKPE-L-DVWKPGEHNGTFRGNNLAFVTATAALEYYW 311 (412)
T ss_pred cccCC-----------C-CC---EEEechhcc-CCccceeEEEEchh-h-hccCCCccCCCCCccHHHHHHHHHHHHHHh
Confidence 00111 1 22 337899998 7 999999999554 3 322211 1112244553333 223 35
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCC
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSS 397 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~ 397 (464)
.++.+ .++++++.+.++++.+.+.+.+.. +.......|+++|+.++.. ....++...++ ++||++.+...
T Consensus 312 ~~~~l-~~~~~~~g~~l~~~l~~l~~~~~~--~~~~vrg~Gl~~~l~l~~~------~~~~~~~~~~~-~~Gv~v~~~~~ 381 (412)
T TIGR02407 312 SDDAF-EKAVQRKSEIIQERLDRIVAEYPE--LIKQVRGRGLMQGIECGDG------DLAGKIAKAAF-ENGLIIETSGP 381 (412)
T ss_pred cccHH-HHHHHHHHHHHHHHHHHHHhhCCC--ceEeeecceeEEEEEecCh------HHHHHHHHHHH-HCCCEEeccCC
Confidence 55544 555666666666665544443322 2233345688999999742 11224556654 67999987532
Q ss_pred CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 398 CHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 398 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+ .+.+|++.+. ++++++++++++|++++++
T Consensus 382 ~----~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 382 N----DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred C----CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 2 4579999987 7999999999999998853
No 253
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.2e-16 Score=149.74 Aligned_cols=331 Identities=15% Similarity=0.131 Sum_probs=205.1
Q ss_pred EEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh
Q 037587 39 IQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGS 118 (464)
Q Consensus 39 i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~ 118 (464)
++|..+.-.-+.+.+.+++.+... .....| |.++..+++.+++.+.++ ...++++.++
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~------------~~~~~Y----G~D~~~~~~e~~~ae~~g------~~a~~Fv~sG 59 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA------------VGDDVY----GEDPTTNALEQRIAELFG------KEAALFVPSG 59 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc------------cCCCCC----CCCHHHHHHHHHHHHHhC------CceEEEecCc
Confidence 344444434456667776665310 122345 445555666666555443 3789999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChhhh--cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe
Q 037587 119 TAANETLMFCLADPGDAFLLPTPYYPGFDRD--LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196 (464)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~ 196 (464)
|+++.+++.+.++||+.|++..-.|-...+. .....+ ..+++..+..+..+++++++..+.........+.++++.
T Consensus 60 T~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~--~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e 137 (342)
T COG2008 60 TQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGG--GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLE 137 (342)
T ss_pred cHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcC--CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEe
Confidence 9999999999999999999998887543332 112212 233444444456799999999887622133345556666
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC
Q 037587 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS 276 (464)
Q Consensus 197 ~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g 276 (464)
|.+|-.|.++|.+++++|.++|+++|+.+..|.+-........ . ++...+.. ....+.-++||..+
T Consensus 138 ~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~val--g-~~~~~~~~-----------~~D~v~~~~tK~g~ 203 (342)
T COG2008 138 NTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVAL--G-VALKTIKS-----------YVDSVSFCLTKGGG 203 (342)
T ss_pred eccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHc--C-CCHHHHHh-----------hCCEEEEecccCCc
Confidence 6666889999999999999999999999999997641111111 1 23444432 33455668999876
Q ss_pred CCccEEEEEEecCHHHHHHHHHhc-cc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 277 MPGFRVGMIYSNNERVVSAATKMS-SF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 277 ~~GlRiG~l~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
.+ +|.|+.-+..+.+.++..+ .. ..-+.+..+....+|++.-|.. .-..-.+...+|.+.|... |++
T Consensus 204 ~~---~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~-----~~~Han~mA~~La~~~~~~~G~~ 275 (342)
T COG2008 204 AP---VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRL-----AADHANAMAARLAEGLEAKPGVK 275 (342)
T ss_pred ce---eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHH-----HHHHHHHHHHHHHHhhhhcCCce
Confidence 55 4887765666555443222 22 2223345555556676654411 1111122356788888854 988
Q ss_pred eec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 352 CLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+.. +++| .+++++++..- ....+ ...+...|+.+.++. ..+|+..++ ++++++++++..++.++
T Consensus 276 ~~~~~~tN-~vf~~l~~~~i-----~~l~~-~~~~~~~~~~~~~~~-------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 276 LAFPVETN-MVFVRLPESAI-----EALRL-AGALFYRGVLIGAHG-------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eccCCccc-EEEEECChHHH-----HHHHh-hchhheeeeeccCCC-------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 865 5776 88899985211 11111 112234455554322 369999988 89999999999988764
No 254
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.77 E-value=6.4e-16 Score=152.40 Aligned_cols=326 Identities=15% Similarity=0.146 Sum_probs=213.3
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-cccCCCcE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-LKWRPGVE 157 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~~g~~ 157 (464)
.|.......+|.++++++++ .+.++.++.++.++.+++...+++||.| +..+|...... +... |+.
T Consensus 73 ~Yagd~s~~~LE~~vAe~lG----------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~-Ga~ 139 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYYG----------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELN-GGI 139 (460)
T ss_pred hhcCCCcHHHHHHHHHHHHC----------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhC-CcE
Confidence 47766778999999999986 3468999999999998877778999965 44444323222 4444 776
Q ss_pred EEEEecC--------CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 158 IVPIHCS--------SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 158 ~~~v~~~--------~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
.+-+..+ ....+.+|++.+++.|++. ...+++++.+.+++|.. |...|.++++++.++|+++|+.+|+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~--~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~D 217 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEV--GAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFD 217 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccc--cCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEE
Confidence 5555322 1235789999999999742 12355667788888888 79999999999999999999999999
Q ss_pred cccccc--ccC---CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc-
Q 037587 229 EIYSGT--VFD---SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF- 302 (464)
Q Consensus 229 eay~~~--~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~- 302 (464)
.+.... +|- .....-.++.+++.++ -.-...++.|++|.++.+- -|+++.+++.+.+.++.+...
T Consensus 218 aAra~gna~fI~~re~~y~~~~i~ei~~e~-------~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~ 288 (460)
T PRK13237 218 ATRCVENAYFIKEREEGYQDKSIKEIVHEM-------FSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVY 288 (460)
T ss_pred CcchhcChhhhcccccccCCCcHhHHhhhc-------cCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhcccc
Confidence 988622 010 0100112333333332 1123455678999987551 389999888888877665321
Q ss_pred ------CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcc---cccCC
Q 037587 303 ------GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHL---LVSNT 373 (464)
Q Consensus 303 ------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~---~~~~~ 373 (464)
+..+.-...+++.-|.+.-- .++++.+.. ..++|.+.|.+.|+++..|.+|.-++++.... +....
T Consensus 289 eG~~tygg~~grd~~alAvgl~E~~~-~~y~~~ri~----~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~ 363 (460)
T PRK13237 289 EGMPSYGGMAGRDMEAMAIGIEESVQ-YEYIEHRVG----QVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQ 363 (460)
T ss_pred CCCcCCCChhhhHHHHHHhHHHhhch-HHHHHHHHH----HHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCccc
Confidence 22222233333333332111 234444443 44678899999999999999998888876542 11122
Q ss_pred hhHHHHHHHHHHHhcCeEEe-CCCC-CCCC----C-----CCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 374 FEAEKELWKKIIFEVGLNIS-PGSS-CHCN----E-----PGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 374 ~~~~~~l~~~ll~~~gI~v~-pg~~-f~~~----~-----~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.....++..|..+.||--. -|+. ++.+ . -..+|+++.. -|.+.++...++|..+.++...
T Consensus 364 -~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 364 -FPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred -ChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 2344678888888898754 2332 1111 0 2469999976 4889999999999998877663
No 255
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2.9e-16 Score=150.13 Aligned_cols=338 Identities=16% Similarity=0.192 Sum_probs=210.6
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+....|||..+ .|.+ ++|.+.++++++.+.. -..++ .-+.+.+.++|+.+.+..
T Consensus 35 ~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl----------~h~sn----~~~~~~~~~la~~L~~~s--- 97 (404)
T COG4992 35 YVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKL----------WHVSN----LFYNEPQAELAEKLVELS--- 97 (404)
T ss_pred EEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHh----------hhccc----ccCChHHHHHHHHHHhhC---
Confidence 4455677788998764 5555 4577888877753321 11111 112566677777776431
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---C-C-CCeEEEcCCCCCChhhhcccCCCcEEEE----EecCCC---CCcccC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA---D-P-GDAFLLPTPYYPGFDRDLKWRPGVEIVP----IHCSSS---NGFRIT 172 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~---~-~-gd~Vlv~~p~y~~~~~~~~~~~g~~~~~----v~~~~~---~~~~~d 172 (464)
+ ..+.|+++|+++||++.++.... . + ..+|+....+|++-.-..-.. +-+..+ -|+.+. -.|+ |
T Consensus 98 -~-~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~-t~~~ky~~~F~Pl~~g~~~vpfn-D 173 (404)
T COG4992 98 -P-FADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSA-TGQPKYRKGFGPLLPGFRHVPFN-D 173 (404)
T ss_pred -c-cccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeec-cCChhhccCCCCCCCCceecCCC-C
Confidence 1 37899999999999999998742 2 2 237888888876543222111 111100 011110 0111 7
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
++++++++++ ++.+|++---.--.|.+. +.+-++++.++|++||+++|.||+..++.-.+. +...-
T Consensus 174 i~al~~ai~~------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk------~fA~e- 240 (404)
T COG4992 174 IEALEAAIDE------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK------LFAYE- 240 (404)
T ss_pred HHHHHHHhcc------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch------HHHHH-
Confidence 8999999976 788777764477788765 455699999999999999999999987432222 11110
Q ss_pred ccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcC---CchhhHHH
Q 037587 252 DRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLS---DKKFTCNY 326 (464)
Q Consensus 252 ~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~---~~~~~~~~ 326 (464)
..+..--+-++.|.+| .|+.||.+++. +.+...+..- .+.+..|+++.+++.++++ ++++
T Consensus 241 ---------~~gV~PDI~tlaK~Lg-GG~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~l---- 305 (404)
T COG4992 241 ---------HYGVEPDILTLAKALG-GGFPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGL---- 305 (404)
T ss_pred ---------HhCCCCCEEEeecccc-CCccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhH----
Confidence 1122223458999999 99999999995 4444433221 1223367777777666554 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----C-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 327 MKENRKRLRKRKEMLVSGLKVA----G-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~~----g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
+++ .+++-++|.+.|.++ + ++-.. .-|+++-+.+..... ..+++..+ .++||++.+..
T Consensus 306 l~~----v~~~g~~~~~~L~~l~~~~~~v~~vR-G~GLmiGiel~~~~~------a~~~~~~~-~~~gvL~~~a~----- 368 (404)
T COG4992 306 LEN----VREKGEYLLQRLRELKRRYPLVKEVR-GRGLMIGIELKEPYR------ARDIVRAL-REEGVLVLPAG----- 368 (404)
T ss_pred HHH----HHHHHHHHHHHHHHHhhcCCceeeee-cceeEEEEEecCccc------HHHHHHHH-HHCCeEEecCC-----
Confidence 333 233444455555543 2 12223 336888888875431 12355555 57799998653
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 402 EPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++.+|+.... +++|++++++++|++++++..
T Consensus 369 -~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 369 -PNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred -CCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 5689999887 799999999999999998654
No 256
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=2.3e-15 Score=152.64 Aligned_cols=356 Identities=12% Similarity=0.067 Sum_probs=199.5
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+.......+.+..+|+.+.+...
T Consensus 49 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p-- 113 (443)
T PRK06058 49 IVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVA-------------RFTHTCFMVTPYEGYVAVAEQLNRLTP-- 113 (443)
T ss_pred EEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC--
Confidence 3444556678898765 2333 34667777666422 222222222235666777777765422
Q ss_pred CCCC-CCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCC--------c-----EEEEEecC--CC
Q 037587 105 VKFD-PNKLVLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPG--------V-----EIVPIHCS--SS 166 (464)
Q Consensus 105 ~~~~-~~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g--------~-----~~~~v~~~--~~ 166 (464)
.. .+.+++++++++++..+++.. ....++|+...++|++....+....+ . .+..++.. ..
T Consensus 114 --~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (443)
T PRK06058 114 --GDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYR 191 (443)
T ss_pred --CCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccc
Confidence 11 247889999999999998842 12347899999999887633221101 0 11222211 00
Q ss_pred C--CcccCH-HHHHHHHHHHhh--cCCceEEEEEeCCCCCCC-CC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 167 N--GFRITI-SALENAYQQAQT--LNLKVKGVLITNPSNPLG-TA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 167 ~--~~~~d~-~~l~~~i~~~~~--~~~~~~~vil~~P~NPtG-~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
+ .+..+. +.+++.++.... ...++.+|+ ..|-+..| .. .+.+.+++|.++|++||+++|.||++.++...+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~ 270 (443)
T PRK06058 192 DPKGLATDGEEAAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA 270 (443)
T ss_pred cccccccchHHHHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh
Confidence 0 000111 222222222111 123566554 66866554 43 4577899999999999999999999987533222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHc
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRML 317 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l 317 (464)
.+ . .+.. + ..+.++ +++|.+| .|+++|+++++ +.+.+.+.... ..+..++++++++.+.|
T Consensus 271 --~f-a-~~~~-g--------v~PDiv---~~gK~l~-~G~Pi~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (443)
T PRK06058 271 --WF-A-CEHE-G--------IVPDLI---TTAKGIA-GGLPLSAVTGR-AEIMDAPHPGGLGGTYGGNPVACAAALAAI 332 (443)
T ss_pred --hh-H-HHhc-C--------CCCCEE---EEccccc-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 11 1 1111 1 112333 6689999 99999999994 44544443221 22346788888888777
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCee-ecCCccEEEEEecCccc-ccCChhHHHHHHHHHHHhcCeE
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRC-LKSNAGLFCWVDMRHLL-VSNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~-~~~~~g~f~~~~l~~~~-~~~~~~~~~~l~~~ll~~~gI~ 391 (464)
+.-. + +...+..+++.+++.+.|++ +++.. ..+.| .++.+.+.... ...+......++..++ ++||+
T Consensus 333 ~~~~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G-~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~ 405 (443)
T PRK06058 333 ETIE--E---DDLVARARQIEALMTDRLRALAAEDDRIGDVRGRG-AMIAIELVKPGTTEPDAELTKALAAAAH-AAGVI 405 (443)
T ss_pred HHHH--H---cCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccc-eEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeE
Confidence 5311 1 11223333344445555544 23211 23444 56666663211 1111112234555554 67999
Q ss_pred EeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 392 ISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 392 v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+.|+..|+ +++|+.... ++++++++++++|++++++
T Consensus 406 ~~~~~~~~----~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 406 VLTCGTYG----NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EeccCCCC----CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 99875543 589998665 7999999999999999865
No 257
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.77 E-value=1.2e-15 Score=155.47 Aligned_cols=289 Identities=14% Similarity=0.118 Sum_probs=176.8
Q ss_pred CCCCcEEEe---CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC---------CCcEEEEEecCCCCCcccCHH
Q 037587 107 FDPNKLVLT---AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR---------PGVEIVPIHCSSSNGFRITIS 174 (464)
Q Consensus 107 ~~~~~i~it---~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~---------~g~~~~~v~~~~~~~~~~d~~ 174 (464)
++++++.++ +|+++++..++.+++++||.|++....++......... .+.++..++.+. +..+|++
T Consensus 95 a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~ 172 (452)
T PTZ00094 95 LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYD 172 (452)
T ss_pred CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHH
Confidence 567777666 78999999999999999999999877776654432111 013344555553 3568999
Q ss_pred HHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccC
Q 037587 175 ALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRN 254 (464)
Q Consensus 175 ~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~ 254 (464)
+|++.++.. +++++++. ++.+|...+ +++|.++|+++|+++++|++++....... .....
T Consensus 173 ~L~~~l~~~-----~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~--~~~~~-------- 232 (452)
T PTZ00094 173 KLEELAKAF-----RPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAG--VLPSP-------- 232 (452)
T ss_pred HHHHHHHHh-----CCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCC--CCCCC--------
Confidence 999998642 56666654 345898876 55566778899999999999984333221 00000
Q ss_pred cCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc----ccC--CCChHHHHHHHHHcCCchhhHHHHH
Q 037587 255 IDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS----SFG--LVSSQTQYLLSRMLSDKKFTCNYMK 328 (464)
Q Consensus 255 ~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~----~~~--~~s~~~q~~~~~~l~~~~~~~~~~~ 328 (464)
.....+++.|++|+++ |.+.|+++++++.......... +.+ +.+.....++..+++.-. ....+
T Consensus 233 ------~~~~D~l~~S~hK~l~--GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~--~~~~~ 302 (452)
T PTZ00094 233 ------FPYADVVTTTTHKSLR--GPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQ--SPEWK 302 (452)
T ss_pred ------CCCCcEEEcCCccCCC--CCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHh--ChhHH
Confidence 1134577899999872 2334888775432211111111 111 222233333333333211 12244
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeecCCc-cEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe-CCCCCCC--CCCC
Q 037587 329 ENRKRLRKRKEMLVSGLKVAGIRCLKSNA-GLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS-PGSSCHC--NEPG 404 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~-pg~~f~~--~~~~ 404 (464)
+.++++.+..+++.+.|.+.|+++..+.. ....++.+.... .. . +.+..+|+++||.+. ++..+.. ..++
T Consensus 303 ~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~----~~-~-~~~~~~L~~~gI~vs~~~~p~~~~~~~~~ 376 (452)
T PTZ00094 303 EYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFG----IT-G-SKMEKLLDAVNISVNKNTIPGDKSALNPS 376 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCC----CC-H-HHHHHHHHHCCcEEecccCCCCCcCCCCC
Confidence 56677788888899999888887764221 223445553211 01 1 234555677899994 4443321 1357
Q ss_pred eEEEEeec-CC----HHHHHHHHHHHHHHHHhhC
Q 037587 405 WFRICFAN-IT----EETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 405 ~~Ris~~~-~~----~e~l~~~l~~l~~~l~~~~ 433 (464)
++|+++.. .+ +++++.+++.|.++++..+
T Consensus 377 ~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~ 410 (452)
T PTZ00094 377 GVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQ 410 (452)
T ss_pred eEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89999966 33 8999999999999998654
No 258
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=2.6e-15 Score=147.91 Aligned_cols=360 Identities=13% Similarity=0.082 Sum_probs=212.2
Q ss_pred CCCCCCCCCceEEeeccccc--c--cHHHHHHHHHhhhhhHHhhhccccccc-ccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 28 PYDQLHNPSGIIQMGLAENQ--L--SFDLLESWLASNQEAVELKRNGESLFR-ELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
.|..+.....+|||..+.+- + ..|.+.++++++.+. +. ...+|..+ +....+|+.+....
T Consensus 48 ~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~----------~~h~~~~~~~~----e~~v~~ae~L~~~~- 112 (447)
T COG0160 48 AYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAK----------LNHTHTRDLYY----EPYVELAEKLTALA- 112 (447)
T ss_pred CEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHH----------hhcccCCcccc----hhHHHHHHHHHHhC-
Confidence 35555667788999985443 3 357777777775332 11 12233222 44455555554331
Q ss_pred CCCCC-CCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCC-------------CcEEEEEecC--
Q 037587 103 NKVKF-DPNKLVLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRP-------------GVEIVPIHCS-- 164 (464)
Q Consensus 103 ~~~~~-~~~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~-------------g~~~~~v~~~-- 164 (464)
+- ....++++++++++++.+++.. ......|+...-.|++.......+. .-.+..+|.+
T Consensus 113 ---p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~ 189 (447)
T COG0160 113 ---PGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNP 189 (447)
T ss_pred ---CcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCcc
Confidence 12 3467999999999999999874 2334678888888866433211110 1124444432
Q ss_pred CCCCccc--------CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 165 SSNGFRI--------TISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 165 ~~~~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
.-+.|.. ..+.++..+........++.++|+-.-..-.|.+ .|.+.++++.++|++||+++|+||+..+
T Consensus 190 yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG-- 267 (447)
T COG0160 190 YRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG-- 267 (447)
T ss_pred ccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--
Confidence 2122221 2334455444433344567766665447777765 5666799999999999999999999998
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH-HHhcccCCCChHHHHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA-TKMSSFGLVSSQTQYLLS 314 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~-~~~~~~~~~s~~~q~~~~ 314 (464)
|+..+ ++..+-.. +.+.-+-++||.+| .|+.+|.++.+++ +.... ......+..|+++.+++.
T Consensus 268 ~GRTG-~~fa~E~~-------------gv~PDivt~aK~ig-~G~Pl~avv~r~e-i~~~~~g~~~~Tf~GNpva~Aaa~ 331 (447)
T COG0160 268 FGRTG-KMFAFEHF-------------GVEPDIVTLAKSLG-GGLPLSAVVGRAE-IMDWPPGGHGGTFGGNPVACAAAL 331 (447)
T ss_pred CCccc-cchhhhhc-------------CCCCCEEEeccccc-CCCceeEEeccHH-hcccCCcccCCCCCcCHHHHHHHH
Confidence 44331 22222111 22222449999999 7999999999544 43322 222333456777777777
Q ss_pred HHcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc--cCChhHHHHHHHHHHHhcC
Q 037587 315 RMLSD---KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV--SNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 315 ~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~--~~~~~~~~~l~~~ll~~~g 389 (464)
+.|+- ..+ .++..++-+.++++...+.+.....| . .-.-|+++-+++-..-. .++......++.+++ ++|
T Consensus 332 AvL~vie~e~L-~~~a~~~G~~l~~~L~~l~~~~~~Ig-d--VRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~G 406 (447)
T COG0160 332 AVLDVIEEENL-LERAAELGEYLRDRLEELQEKHPLIG-D--VRGLGLMIGVELVKDRDTKEPDAELAAKIVARAF-ERG 406 (447)
T ss_pred HHHHHHHHccH-HHHHHHHHHHHHHHHHHHHhhcCcee-c--ccccceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcC
Confidence 76662 222 33333333444444333333222111 1 11336888888864321 122233445666665 679
Q ss_pred eEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 390 LNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 390 I~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+++..+..+ .+.+||.... +++++++.+++.|.++++..
T Consensus 407 lil~~~G~~----~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 407 LLLLTCGPH----GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CEEeccCCC----CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 998876544 4689999877 79999999999999998764
No 259
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.4e-15 Score=153.14 Aligned_cols=155 Identities=19% Similarity=0.228 Sum_probs=118.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
...|.+.+|++.+ .+..++++++++++..++.+++++||.|+++.++|.+.... +... |++++.+
T Consensus 65 ~~~le~~lA~l~g----------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~-G~~v~~v 133 (427)
T PRK05994 65 NAVLEERVAALEG----------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSF-GWQVRWA 133 (427)
T ss_pred HHHHHHHHHHHhC----------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 4677888888864 23467888899999999999999999999999999864332 4445 9998888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++.+++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.. +...
T Consensus 134 d~~-------d~~~l~~ai~~------~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~-~~~~-- 194 (427)
T PRK05994 134 DAD-------DPASFERAITP------RTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASP-YLIR-- 194 (427)
T ss_pred CCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccc-ccCC--
Confidence 742 67888888754 7899999999999999986 677888899999999999999732 1111
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~ 287 (464)
+ + ..+..+++.|++|.+|-+|-.+|.++.
T Consensus 195 ---p---l-----------~~gaDivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 ---P---I-----------EHGADIVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred ---c---c-----------ccCCcEEEEcCccccCCCCCcEEEEEE
Confidence 1 1 114457889999999756655665544
No 260
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=2.8e-15 Score=151.47 Aligned_cols=349 Identities=14% Similarity=0.089 Sum_probs=196.6
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ .........-..+.+..+|+.+.+...
T Consensus 34 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p- 99 (423)
T PRK05964 34 AYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLD-------------RLDHVIFAGFTHEPAERLAQRLVALTP- 99 (423)
T ss_pred cEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHh-------------hCCCccccccCCHHHHHHHHHHHHhCC-
Confidence 35445566788999765 4444 34666776666422 111100001123555667777654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD-------P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
-..+.++++++++|++..+++.... + ..+|+...-+|++.........+- .+..++.
T Consensus 100 ---~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 176 (423)
T PRK05964 100 ---GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPF 176 (423)
T ss_pred ---CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCC
Confidence 1236899999999999999886421 2 357888888887754322111011 1122222
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITN-PSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
...+....+++.+++.+.+ .+.++.+|++.. .++..|... +.+.+++|.++|++||+++|+||++.++...+.
T Consensus 177 ~~~d~~~~~~~~l~~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~-- 251 (423)
T PRK05964 177 PPDGYEQATLDALEALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGT-- 251 (423)
T ss_pred CcchhHHHHHHHHHHHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--
Confidence 2111011126677776653 234666666543 266778765 889999999999999999999999987422221
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--------cccCCCChHHHHH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--------SSFGLVSSQTQYL 312 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~q~~ 312 (464)
.+ . .+.. +...-+.++||.++ .| +++|++++ ++.+.+.+... ...+..++++..+
T Consensus 252 ~~-a-~~~~------------~v~pDi~~~~K~l~-gG~~p~~av~~-~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aa 315 (423)
T PRK05964 252 LF-A-CEQA------------GVSPDIMCLSKGLT-GGYLPLAATLC-TAEIFEAFYSDDRAKAFMHSPSYTANPLACAA 315 (423)
T ss_pred hh-H-HHhc------------CCCCCeeeeehhhh-cCcccceEEEE-cHHHHHhhhcCCcccccccCCCCCcCHHHHHH
Confidence 11 1 1111 11112348899997 55 89999888 55555544321 1112346666666
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhc
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~ 388 (464)
+.+.++--+- .++.++ +.+.-+++.+.|+++ +.+. ... -|+++.+.+..... . .....+...++ ++
T Consensus 316 a~a~l~~l~~-~~~~~~----~~~~g~~l~~~l~~l~~~~~i~~vrg-~Gl~~~i~l~~~~~--~-~~~~~l~~~l~-~~ 385 (423)
T PRK05964 316 ANASLDLFED-EPVLER----VAALSAGLAEGLEPFRDLPGVADVRV-LGAIGAVELDRPVL--E-RDGPALRAFAL-ER 385 (423)
T ss_pred HHHHHHHHHh-cCHHHH----HHHHHHHHHHHHHhhccCCCeEEeec-ccEEEEEEeccCcc--h-hHHHHHHHHHH-HC
Confidence 6665552110 111222 223333344444333 2221 222 35566677753210 0 11234566654 67
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 389 GLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
||.+.+.. +.+|++... .++++++.++++|++++++
T Consensus 386 Gv~v~~~~-------~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 386 GVLLRPLG-------NTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred CeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 99998631 369999876 7999999999999999875
No 261
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.74 E-value=2e-15 Score=150.74 Aligned_cols=340 Identities=16% Similarity=0.145 Sum_probs=195.0
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.+.... .. +.......++...+|+++.+..
T Consensus 29 ~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~-------------~~-~~~~~~~~~~~~~la~~l~~~~--- 91 (395)
T PRK03715 29 WLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEK-------------LI-NPSPAFYNEPMAKLAGLLTQHS--- 91 (395)
T ss_pred EEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHh-------------cc-cccccccCHHHHHHHHHHhhcc---
Confidence 4434456688998753 3333 246666666654211 11 1111224677888899887431
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc------CCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCC-CCCc----ccC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA------DPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS-SNGF----RIT 172 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~------~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~-~~~~----~~d 172 (464)
..+.+++++++++++..+++... .+| .+|+..+.+|++.........|.........+ ..++ ..|
T Consensus 92 ---~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d 168 (395)
T PRK03715 92 ---CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELND 168 (395)
T ss_pred ---CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCch
Confidence 24689999999999999998864 123 57888888887754333222232211100000 0111 136
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
++.+++.+.+ ++.+|++...++..|... |.+.++++.++|+++|+++|+||++.+ |+..+..+ . .+..
T Consensus 169 ~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG--~GRtG~~~-a-~~~~- 237 (395)
T PRK03715 169 IASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTG--CGRTGTLF-A-YELS- 237 (395)
T ss_pred HHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC--CCCCcchh-h-Hhhc-
Confidence 7888877643 566666654456666654 688899999999999999999999986 43321111 1 1111
Q ss_pred ccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-hcccCCCChHHHHHHHHHcCCchhhHHHHHHH
Q 037587 252 DRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKEN 330 (464)
Q Consensus 252 ~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 330 (464)
+ ..+. +.+|+|.+| .|+.+|.++++++ +...... ....+..++++.+++.+.|+--+ + +..
T Consensus 238 g--------v~PD---i~t~gK~lg-~G~p~~av~~~~~-i~~~~~~~~~~T~~g~pl~~aaala~L~~l~--~---~~l 299 (395)
T PRK03715 238 G--------IEPD---IMTLGKGIG-GGVPLAALLAKAE-VAVFEAGDQGGTYNGNPLMTAVGVAVISQLL--A---PGF 299 (395)
T ss_pred C--------CCCc---eeeehhhhh-CCcceEEEEEccc-cccccCCCcCCCCCCCHHHHHHHHHHHHHHH--h---ccH
Confidence 0 1112 458899998 7899999988554 3321111 11112245565555555443211 0 112
Q ss_pred HHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhc---CeEEeCCCCCCCCCC
Q 037587 331 RKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEV---GLNISPGSSCHCNEP 403 (464)
Q Consensus 331 ~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~---gI~v~pg~~f~~~~~ 403 (464)
.+.+++.-+++.+.|++ .++.-.... |+++-+.+... . ...+ ...+.+. ||++.+.. +
T Consensus 300 ~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~-Glm~~i~l~~~----~---~~~~-~~~~~~~~~~Gi~~~~~~------~ 364 (395)
T PRK03715 300 LEGVRARGEYLKEKLLELSEERGLEGERGE-GLLRALLLGKD----I---GPQI-VEKARDMQPDGLLLNAPR------P 364 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcCeEEcc-eeEEEEEecCc----h---HHHH-HHHHHhccCCCEEEeecC------C
Confidence 23333344444444443 344333333 56777877531 0 0112 2222344 99986432 3
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 404 GWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 404 ~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..+|+++.. ++++++++++++|++++++.
T Consensus 365 ~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 365 NLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred CEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 579999987 79999999999999998753
No 262
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.74 E-value=6.1e-17 Score=142.26 Aligned_cols=166 Identities=18% Similarity=0.225 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh-hhcccCCCcEEEEEecCC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD-RDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~~g~~~~~v~~~~ 165 (464)
.++++.++++++ .+.+++++++|+++++.+++.++..+|++|+++.|+|++.. ..+... |++++.++.+.
T Consensus 3 ~~~~~~l~~~~~--------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~ 73 (170)
T cd01494 3 EELEEKLARLLQ--------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELA-GAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHcC--------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhc-CCEEEEeccCC
Confidence 678899998874 35778999999999999999999888999999999998887 666655 99999998765
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
.+....+.+.+++.. .+.+++++++++|+||+|..++. ++|.++|+++|+++|+|++|..+..... . ..
T Consensus 74 ~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~--~-~~ 142 (170)
T cd01494 74 AGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP--G-VL 142 (170)
T ss_pred CCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc--c-cc
Confidence 433333333443332 23588999999999999998875 6777888899999999999986544321 1 00
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~ 287 (464)
. . ..+..+++.|++|.+|. .++|+++.
T Consensus 143 ---~-~---------~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 143 ---I-P---------EGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred ---c-c---------cccCCEEEEEcccccCC--CceEEEEe
Confidence 1 1 12456788999999974 67999986
No 263
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.74 E-value=7.4e-15 Score=148.27 Aligned_cols=357 Identities=15% Similarity=0.092 Sum_probs=195.8
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...... .....+.+..+|+.+.+...
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~----------~~~~~~---~~~~~~~~~~lae~l~~~~~- 96 (425)
T PRK09264 31 SWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQR----------DGITHG---LDMHTTAKREFLETFEETIL- 96 (425)
T ss_pred CEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHh----------cccccc---cccCcHHHHHHHHHHHHhhc-
Confidence 34445556778998665 2333 346677777664321 001111 01123455556665543210
Q ss_pred CCCCCCC-cEEE-eCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCC---------C---cEEEEEecCCCC
Q 037587 104 KVKFDPN-KLVL-TAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRP---------G---VEIVPIHCSSSN 167 (464)
Q Consensus 104 ~~~~~~~-~i~i-t~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~---------g---~~~~~v~~~~~~ 167 (464)
.+-..+ .+++ +++++|++..+++... ....+|+....+|++....+.... + ..+..+|.+...
T Consensus 97 -~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~ 175 (425)
T PRK09264 97 -KPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYF 175 (425)
T ss_pred -CCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCcc
Confidence 000112 5656 5899999999888642 223678888888877643211110 1 023334332100
Q ss_pred Cc-ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 168 GF-RITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 168 ~~-~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
.. .-|++.+++.+.+......++.+|++.-...-.|. ..+.+.+++|.++|++||+++|+||++.++...+. .+ .
T Consensus 176 ~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~--~~-~ 252 (425)
T PRK09264 176 GGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT--FF-S 252 (425)
T ss_pred ccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH--HH-H
Confidence 00 02567777777542111124555555433455675 56888999999999999999999999987322221 11 1
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHc----CC
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRML----SD 319 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l----~~ 319 (464)
. +.. + ..+. +.+|||.+|..|+++|+++++++ +. .+.. ....+..++++..++.+.+ .+
T Consensus 253 ~-~~~-~--------v~PD---i~t~~K~l~~~G~pigav~~~~~-i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~ 317 (425)
T PRK09264 253 F-ERA-G--------ITPD---IVTLSKSISGYGLPMALVLIKPE-LD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSD 317 (425)
T ss_pred H-hhc-C--------CCCC---EEEeccccCCCccceEEEEEchh-hh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 1 110 1 1122 34789999944999999999644 43 2221 1111234555555444444 33
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
+++ .++++++.+.++++.+.+.+ +++ +.......|+++++.++.. .....++..++ ++||.+.++..+
T Consensus 318 ~~l-~~~~~~~g~~l~~~l~~l~~---~~~~~~~~vrg~Gl~~~i~l~~~------~~~~~l~~~~~-~~Gv~~~~~~~~ 386 (425)
T PRK09264 318 DAF-EKEVKAKGELVRERLEEIAA---KYPGLGAEVRGRGMMQGIDFGDG------ELAGKIAAEAF-ENGLIIETSGPE 386 (425)
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHH---hCCCceecceecccEEEEEecCh------HHHHHHHHHHH-HCCCEEeccCCC
Confidence 332 33444444444433322222 232 2122234578889998642 12224556654 679999875432
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 399 HCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 399 ~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
...+|++... ++++++++++++|.+++++.
T Consensus 387 ----~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~ 417 (425)
T PRK09264 387 ----DEVVKLLPPLTIDEEELEEGLDILEEAVAEV 417 (425)
T ss_pred ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3578888765 68999999999999998764
No 264
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.73 E-value=1.2e-15 Score=135.94 Aligned_cols=304 Identities=13% Similarity=0.194 Sum_probs=203.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
...+.+.+++|++ -|.+-+|+|+.++-+.++.+++++||.|++...++....-++... |+++..+|-..
T Consensus 63 I~~F~~dlaeFlg----------~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEra-gl~v~eVp~tg 131 (382)
T COG1103 63 IKDFLEDLAEFLG----------MDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERA-GLNVAEVPNTG 131 (382)
T ss_pred HHHHHHHHHHHhC----------CceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhc-CCeEEecCCCC
Confidence 4678888999986 467889999999999999999999999999999876555555555 99999999665
Q ss_pred CCCcccCHHHHHHHHHHHhhcC-CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTLN-LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~-~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
...|.++++...+.|++....+ ..+.+.++++|..-.|.+ .+.+.++++|+++++.++...+|. .+.- ..
T Consensus 132 ~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt---~Grm---pv 202 (382)
T COG1103 132 YPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYT---VGRM---PV 202 (382)
T ss_pred CCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhHHHHHHHHHcCCceEeeccee---eccc---cc
Confidence 6689999999999999877665 557888999997778877 578899999999999999999997 3322 13
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-c-------CCCChHHHHHHHHH
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-F-------GLVSSQTQYLLSRM 316 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~-------~~~s~~~q~~~~~~ 316 (464)
+..+. ...++++|-+|+++ +.-.+|.+....+.....+++... + ..++.-... +..+
T Consensus 203 s~ke~-------------g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGap-ivTl 267 (382)
T COG1103 203 SGKEI-------------GADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAP-IVTL 267 (382)
T ss_pred ccccc-------------CCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCch-HHHH
Confidence 33333 56688999999997 555899988744433333332211 1 111211111 1222
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceee---cCCccEEEEEecCccc--ccCChhHHHHHHHHHHHhcCe
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCL---KSNAGLFCWVDMRHLL--VSNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~---~~~~g~f~~~~l~~~~--~~~~~~~~~~l~~~ll~~~gI 390 (464)
+.+-.++.+.+.+--+.++ ..+++...|+++| +.-. |.+.. .+.++.|... ..+....---++.. |+++||
T Consensus 268 mASfP~V~eRVkrWdeEv~-kaR~fv~elEkigg~~qlG~rPk~Hd-Lm~Fetp~f~eIakk~~r~gyFlY~E-LK~RgI 344 (382)
T COG1103 268 MASFPHVVERVKRWDEEVE-KARWFVAELEKIGGVKQLGERPKNHD-LMKFETPVFHEIAKKHKRKGYFLYEE-LKKRGI 344 (382)
T ss_pred HhcCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHhCCCCcccc-eeeecCchHHHHHHhCcCCceeeHHH-HHhcCc
Confidence 2232232333333333333 3467777788774 4322 22222 3444444220 00000000013334 467788
Q ss_pred E-EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 391 N-ISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 391 ~-v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. |.||- ..+|.+|+-.++.|+++..+++++++++++.
T Consensus 345 ~GI~~G~------Tk~~K~svyGl~~Eqve~V~~afkeI~eky~ 382 (382)
T COG1103 345 HGIQPGQ------TKYFKLSVYGLSWEQVEYVVDAFKEIAEKYG 382 (382)
T ss_pred cccccCc------eeEEEEEeecCCHHHHHHHHHHHHHHHHhcC
Confidence 7 55653 5689999977899999999999999998863
No 265
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.73 E-value=5e-15 Score=149.38 Aligned_cols=170 Identities=18% Similarity=0.253 Sum_probs=127.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCeEEEcCCCCCChhhhcccCCCc
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL---------ADPGDAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
..+|++++|++++ .+++++++|+++++..++.++ +++||.|+++.|+|..+...+... |+
T Consensus 65 ~~~fe~~lA~~~g----------~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~-G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLG----------VRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQN-GL 133 (438)
T ss_pred HHHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHc-CC
Confidence 4789999999985 246889999999999988876 478999999999999888888766 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV- 235 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~- 235 (464)
+++.++++. ..|.+|++.+++.+.+ ++++|+++++ +|.. .++++|.++|+++|++||+|++++...
T Consensus 134 ~pv~vdvd~-~~~~id~~~le~~i~~------~tkaVi~~~~---~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~ 200 (438)
T PRK15407 134 VPVFVDVEL-PTYNIDASLLEAAVSP------KTKAIMIAHT---LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGST 200 (438)
T ss_pred EEEEEecCC-CcCCcCHHHHHHHcCc------CCeEEEEeCC---CCCh---hhHHHHHHHHHHCCCEEEEECccchhhh
Confidence 999999874 4688999999998754 7899988864 5543 468889999999999999999998322
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC--CcCCCCCccEEEEEEecCHHHHHHHHHhc
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL--SKDFSMPGFRVGMIYSNNERVVSAATKMS 300 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~--SK~~g~~GlRiG~l~~~~~~~~~~~~~~~ 300 (464)
+.+. .+.++ + .+.+.|| +|.+. .| .-|+++++++.+.+.++.+.
T Consensus 201 ~~g~-----~~G~~-------------g-d~~~fSf~~~k~~~-~g-eGG~l~t~d~~l~~~~~~~~ 246 (438)
T PRK15407 201 YDGR-----MTGTF-------------G-DIATLSFYPAHHIT-MG-EGGAVFTNDPLLKKIIESFR 246 (438)
T ss_pred cCCe-----eeecc-------------C-ceEEEeCCCCCCcc-cc-CceEEEECCHHHHHHHHHHH
Confidence 2211 11111 1 2345566 46664 33 25999998888877655443
No 266
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.73 E-value=1.9e-14 Score=145.90 Aligned_cols=359 Identities=13% Similarity=0.048 Sum_probs=196.8
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.++.. .........-..+.+..+|+.+.+....
T Consensus 31 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p~ 97 (442)
T TIGR00709 31 CWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQ-------------SGLPLHTLDLTTPLKDAFIEALLNIIPK 97 (442)
T ss_pred cEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHH-------------hccCccccccCcHHHHHHHHHHHHhCCC
Confidence 35555566788999765 3333 34667776666422 1110100011245666677776653210
Q ss_pred CCCCCCCc-EEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecCCCCC
Q 037587 104 KVKFDPNK-LVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCSSSNG 168 (464)
Q Consensus 104 ~~~~~~~~-i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~~~~~ 168 (464)
. ..... ++.+++++|++..+++... ....+|+...-+|++....+....|. .+..++.. +.
T Consensus 98 ~--~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~ 173 (442)
T TIGR00709 98 R--KMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HE 173 (442)
T ss_pred c--CCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--cc
Confidence 0 01124 4556899999999988642 22367888888888765443222120 12222221 11
Q ss_pred ccc--------CHHH----HHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 169 FRI--------TISA----LENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 169 ~~~--------d~~~----l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
+.. +.+. +++.+........++.+|++... +|+.....|.+.++++.++|+++|+++|.||++.++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfG 253 (442)
T TIGR00709 174 YRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFG 253 (442)
T ss_pred ccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 111 1122 23333221111235666666544 4554456899999999999999999999999999854
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-HhcccCCCChHHHHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-KMSSFGLVSSQTQYLLS 314 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-~~~~~~~~s~~~q~~~~ 314 (464)
..+. +.....+ . ..+.++ ++||.+| .|+++|+++++++ +..... .....+..++++++++.
T Consensus 254 RtG~---~~a~~~~-g---------v~PDiv---~~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~ 315 (442)
T TIGR00709 254 RSGT---MFAFEHA-G---------IEPDFV---VMSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGT 315 (442)
T ss_pred CCCc---hhHHHHc-C---------CCCcEE---EEccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHH
Confidence 3332 1221111 1 112333 3899999 5999999999654 422211 11122346778888877
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCccccc------C--ChhHHHHHHH
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVS------N--TFEAEKELWK 382 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~------~--~~~~~~~l~~ 382 (464)
+.|+.-+ + +...+..+++.+++.+.|++ +++....-.-|+++.+++...... . +......+..
T Consensus 316 a~L~~i~--~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (442)
T TIGR00709 316 EALNYWK--D---DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQG 390 (442)
T ss_pred HHHHHHH--h---cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHH
Confidence 7775311 1 01122333344444444433 332222223467887877432110 0 0111223444
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.++ ++||++.++.. ..+.+|+..+. +++++++++++++.+++.+
T Consensus 391 ~~~-~~Gvl~~~~~~----~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 391 ACF-ENGLLLETGGR----EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred HHH-HCCeEEeecCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 444 67999976432 13579998877 7999999999999999865
No 267
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=5.3e-15 Score=148.60 Aligned_cols=156 Identities=17% Similarity=0.184 Sum_probs=115.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
...|.+.+|++.+ .+..+++++++.|+..++.+++++||.|+++...|.+.... +... |++++.+
T Consensus 71 ~~~Le~~lA~l~g----------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 139 (436)
T PRK07812 71 QDVVEQRIAALEG----------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKL-GIEVSFV 139 (436)
T ss_pred HHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcC-eEEEEEE
Confidence 3577777777764 23467777888899999999999999999999888765432 3334 8888777
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+ +. .|++.+++++++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++++.... ..
T Consensus 140 d-d~-----~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~-~~-- 201 (436)
T PRK07812 140 E-DP-----DDLDAWRAAVRP------NTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL-IR-- 201 (436)
T ss_pred C-CC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-CC--
Confidence 5 21 278888887754 7899999999999999975 67788888899999999998863211 11
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~ 287 (464)
. ..+ +..+++.|++|.+|-.|--+|.++.
T Consensus 202 ---p-l~~-------------GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 202 ---P-LEH-------------GADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred ---c-hhc-------------CCCEEEEecccccCCCCCeEEEEEE
Confidence 1 111 4457789999999867766777665
No 268
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=6e-14 Score=142.11 Aligned_cols=359 Identities=13% Similarity=0.070 Sum_probs=195.0
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+ ...+ ..|.+.+++.++.+ ....+.......+....+|+.+.+...
T Consensus 35 ~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~-------------~~~~~~~~~~~~~~~~~lae~L~~~~p-- 99 (445)
T PRK08593 35 TLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQAD-------------KFIHYTPAYMYHEPLVRLAKKLCELAP-- 99 (445)
T ss_pred EEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC--
Confidence 4444556678998654 2233 34667777666422 111111111123444555666554321
Q ss_pred CCCC-CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC-------------cEEEEEecCCCCC
Q 037587 105 VKFD-PNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG-------------VEIVPIHCSSSNG 168 (464)
Q Consensus 105 ~~~~-~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g-------------~~~~~v~~~~~~~ 168 (464)
-. .+.|+++++++|++..+++... ....+|+...-+|++....+....+ ..++.+|......
T Consensus 100 --~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~ 177 (445)
T PRK08593 100 --GDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYR 177 (445)
T ss_pred --CCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCcccc
Confidence 11 2589999999999999988632 2235688888888775432211101 0122233211000
Q ss_pred --cc-cCH-------HHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 169 --FR-ITI-------SALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 169 --~~-~d~-------~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
+. .+. +.+++.+.+. ....++.+|++.......|.. .|.+.++++.++|+++|+++|.||++.++...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt 256 (445)
T PRK08593 178 GMYEEPDANFVEEYLAPLKEMFEKY-LPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT 256 (445)
T ss_pred ccccCCcHHHHHHHHHHHHHHHHhh-cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC
Confidence 00 111 2233322211 012367666665446667776 68888999999999999999999999864222
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHH
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSR 315 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~ 315 (464)
+. ....... + ..+. +.+|+|.+| .|+++|+++++ +.+.+.+..... .+..++++.+++.+
T Consensus 257 G~----~~a~~~~-g--------v~pD---i~t~gK~l~-~G~p~gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a 318 (445)
T PRK08593 257 GK----WSSISHF-N--------ITPD---LMSFGKSLA-GGMPMSAIVGR-KEIMESLEAPAHLFTTGANPVSCAAALA 318 (445)
T ss_pred ch----HHHHHhc-C--------CCCC---Eeeeccccc-CCcccEEEEEc-HHHHhhhccCCCCCCCCCCHHHHHHHHH
Confidence 21 1111111 1 1122 348999998 89999999995 455554432111 12356666666666
Q ss_pred HcCCchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCCeeecCCccEEEEEecCccc--ccCChhHHHHHHHHHHHhcC
Q 037587 316 MLSDKKFTCNYMKENRKRLRKRKEMLVSGLK----VAGIRCLKSNAGLFCWVDMRHLL--VSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~g~f~~~~l~~~~--~~~~~~~~~~l~~~ll~~~g 389 (464)
.++.-+- .+ ..+..++.-+++.+.|+ ++++......-|+++.+++.... ..........++..++ ++|
T Consensus 319 ~l~~l~~-~~----l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~G 392 (445)
T PRK08593 319 TIDMIED-ES----LLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHG 392 (445)
T ss_pred HHHHHHh-cc----HHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCC
Confidence 5542110 11 12222223333333333 23332222234567667664211 1111122334666665 679
Q ss_pred eEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 390 LNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 390 I~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
|++.+.. .+.+|++.+. +++++++.+++++.+++++...+
T Consensus 393 v~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 393 VVIIAVA------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred eEEeccC------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 9997531 3479998877 79999999999999999876543
No 269
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.72 E-value=8.7e-15 Score=144.27 Aligned_cols=276 Identities=20% Similarity=0.240 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~~~~v~ 162 (464)
..|.++||+..+ .+.+++++++..|+..++.+++++||.|+++...|.+....+. .. |+++..++
T Consensus 58 ~~le~~la~Le~----------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~-gv~v~~~d 126 (386)
T PF01053_consen 58 RALEQRLAALEG----------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRF-GVEVTFVD 126 (386)
T ss_dssp HHHHHHHHHHHT-----------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHT-TSEEEEES
T ss_pred HHHHHHHHHhhc----------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhccc-CcEEEEeC
Confidence 345555555542 3678999999999999999999999999999999987765543 34 99988876
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC-eEEEEeccccccccCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR-IHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~-~~lI~Deay~~~~~~~~~~ 241 (464)
. -|++++++++++ ++++|++..|.||+..+ .++++|+++|+++| +++|+|..++...+ -
T Consensus 127 ~-------~d~~~l~~~l~~------~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-~--- 186 (386)
T PF01053_consen 127 P-------TDLEALEAALRP------NTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYN-Q--- 186 (386)
T ss_dssp T-------TSHHHHHHHHCT------TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT-C---
T ss_pred c-------hhHHHHHhhccc------cceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceee-e---
Confidence 4 278999998875 89999999999999887 46888999999998 99999999974311 1
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecC-HHHHHHHHHhc-ccC-CCChHHHHHHHHHc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNN-ERVVSAATKMS-SFG-LVSSQTQYLLSRML 317 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~-~~~~~~~~~~~-~~~-~~s~~~q~~~~~~l 317 (464)
....+ +..+++.|.+|.++ ....=.|.+++++ +.+...++... ..+ .+++.....+..-+
T Consensus 187 ---~pL~~-------------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl 250 (386)
T PF01053_consen 187 ---NPLEL-------------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGL 250 (386)
T ss_dssp ----GGGG-------------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHH
T ss_pred ---ccCcC-------------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCC
Confidence 11112 45688999999984 3334478888765 45544443332 222 24555555555544
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eee-c----------------CCccEEEEEecCcccccCChhHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCL-K----------------SNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~-~----------------~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
+. +..+.++..++...+.+.|+++ .+ +|. | ..+| .+.+++....
T Consensus 251 ~T-------l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg-l~sf~l~~~~--------- 313 (386)
T PF01053_consen 251 RT-------LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG-LLSFELKGGE--------- 313 (386)
T ss_dssp TT-------HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS-EEEEEESSHH---------
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc-eeEEEeccch---------
Confidence 44 3445556667778889999887 33 233 2 2345 6667776432
Q ss_pred HHHHHHHHhcCeEEeCCCCCCC-------------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 379 ELWKKIIFEVGLNISPGSSCHC-------------------------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~-------------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+.+..+++.-.+.. .|.++|. -.++.+|||++. |+.+.+++-|+++++
T Consensus 314 ~~~~~f~~~l~l~~-~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 314 EAARRFLDALKLFS-IAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp HHHHHHHHH-SSSE-ESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred hhhHhHHhhhhhHh-hhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 12344444434331 1222221 014689999995 557777777777764
No 270
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.72 E-value=1.7e-15 Score=136.50 Aligned_cols=335 Identities=13% Similarity=0.100 Sum_probs=206.2
Q ss_pred CCceEEeeccccccc---HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 35 PSGIIQMGLAENQLS---FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
..++++|+.| |.+. .|.+.++-.+..+. -..++....-++.|.+. +..|...||++.+ .++
T Consensus 66 ~k~ilnFcaN-nYLGLsshPeii~a~~~alee---yGaGlssvrfIcGtq~i--Hk~LE~kiAqfh~----------rED 129 (417)
T KOG1359|consen 66 DKKILNFCAN-NYLGLSSHPEIINAGQKALEE---YGAGLSSVRFICGTQDI--HKLLESKIAQFHG----------RED 129 (417)
T ss_pred ccceeeeccc-ccccccCChHHHHHHHHHHHH---hCCCccceeEEecchHH--HHHHHHHHHHHhC----------CCc
Confidence 4567788765 3332 34444433332211 11233334455666654 4788888888875 344
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
.++.+..-.++..++.+++.|.|.|+..+..+......++.. . + .-.+|+-.++..+.++.+ .+.+
T Consensus 130 ~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLc-k-r----------y~h~dv~~l~~~l~~a~k--~r~k 195 (417)
T KOG1359|consen 130 TILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLC-K-R----------YRHVDVFDLEHCLISACK--MRLK 195 (417)
T ss_pred eEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHH-h-h----------hccchhHHHHHHHHHhhh--heEE
Confidence 556677777888888899999999999988887776665543 2 1 113566667766654321 2666
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|+....=...|.+.| +++|.++++++|.++++||+++-..|+..+ ....++.. ...+..++.+++
T Consensus 196 lv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tG---rGt~E~~~--------vm~~vdiinsTL 261 (417)
T KOG1359|consen 196 LVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETG---RGTAEEFG--------VMGDVDIINSTL 261 (417)
T ss_pred EEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCC---CChHHHhC--------CCCcceehhhhh
Confidence 5555555678888876 566778888999999999999977665442 22223322 134677888999
Q ss_pred CcCCC-CCccEEEEEEecCHHHHHHHHHh-cccCC---CCh----HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 272 SKDFS-MPGFRVGMIYSNNERVVSAATKM-SSFGL---VSS----QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 272 SK~~g-~~GlRiG~l~~~~~~~~~~~~~~-~~~~~---~s~----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
+|++| ..| ||..+|.+ +...++.. ++|.. .++ .+..+...++.+.. .....+.+..++.
T Consensus 262 gKAlGga~G---Gyttgp~~-li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~--------~i~~~~a~~qrfr 329 (417)
T KOG1359|consen 262 GKALGGASG---GYTTGPKP-LISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSK--------EIQSRQANTQRFR 329 (417)
T ss_pred hhhhcCCCC---CCccCChh-HHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHH--------HHHHHHHHHHHHH
Confidence 99996 555 99999655 55555544 34421 121 12222222222221 2233445556677
Q ss_pred HHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHH
Q 037587 343 SGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQV 420 (464)
Q Consensus 343 ~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~ 420 (464)
+.++..|+++..... ..+.+-+... ..+.....+||+ .||+|.--+... +.+...+|+.++. .++|++++
T Consensus 330 ~~me~aGftIsg~~h-PI~pv~lGda------~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~ 401 (417)
T KOG1359|consen 330 EFMEAAGFTISGASH-PICPVMLGDA------RLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDR 401 (417)
T ss_pred HHHHhcCceecCCCC-CccceecccH------HHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHH
Confidence 877777998875433 2443434321 223456778884 699997333222 2234568888877 79999999
Q ss_pred HHHHHHHHHHhhC
Q 037587 421 ALQRIKVFAQSCN 433 (464)
Q Consensus 421 ~l~~l~~~l~~~~ 433 (464)
+++++.++.+.++
T Consensus 402 ~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 402 LIEAFSEVGRFLN 414 (417)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999887665
No 271
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=4.8e-15 Score=149.06 Aligned_cols=155 Identities=14% Similarity=0.150 Sum_probs=121.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v 161 (464)
..+|++.+|++.+ . +..++++++++|+.+++.+++++||.|+++...|......+ ... |++++.+
T Consensus 66 ~~~le~~lA~l~g--------~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~-Gi~v~~v 134 (433)
T PRK08134 66 VAVLEERVAALEG--------G--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRF-GIETTFV 134 (433)
T ss_pred HHHHHHHHHHHhC--------C--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhC-CeEEEEE
Confidence 4678888888875 2 23688999999999999999999999999999997654433 335 9999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++++++.+++ ++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.+++...+ ..
T Consensus 135 d~~-------d~~~l~~~i~~------~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~-~~-- 195 (433)
T PRK08134 135 KPG-------DIDGWRAAIRP------NTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL-LR-- 195 (433)
T ss_pred CCC-------CHHHHHHhcCC------CCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc-CC--
Confidence 753 68899988865 8899999999999999975 77788889999999999999863211 11
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~ 287 (464)
++ .+ +..+++.|.+|.+|-+|-.+|.++.
T Consensus 196 ---pl-~~-------------GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 ---PF-EH-------------GADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ---ch-hc-------------CCCEEEeccccccCCCCCceEEEEE
Confidence 11 12 4568899999999867766776654
No 272
>PRK02769 histidine decarboxylase; Provisional
Probab=99.70 E-value=9.2e-15 Score=144.51 Aligned_cols=294 Identities=11% Similarity=0.079 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKL--VLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.++.+.+.+++.+.++ ++++++ ++|+|+||++..++.+. ..+++.|++++-.|......++.+ |.+...++
T Consensus 64 ~~~e~~~~~~~a~l~g----~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~V~ 138 (380)
T PRK02769 64 FDFERDVMNFFAELFK----IPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLL-RIKSRVIT 138 (380)
T ss_pred HHHHHHHHHHHHHHhC----CCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc-CCCCceec
Confidence 4555555555555544 455554 88999999987776543 246889999999998888888776 88888888
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC---eEEEEeccccccccCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR---IHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~---~~lI~Deay~~~~~~~~ 239 (464)
.++ ++.+|+++|++.+++. +.++.+|+++.++|+||.+-| +++|.++|+++| +++.+|.+|+.+...-.
T Consensus 139 ~~~--~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~ 210 (380)
T PRK02769 139 SLP--NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFV 210 (380)
T ss_pred cCC--CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeeccc
Confidence 764 5579999999999762 345888999999999999955 667788888987 79999999986432111
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc---------CCCChHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF---------GLVSSQTQ 310 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~---------~~~s~~~q 310 (464)
. . ...... ..+...+..|.+|.++ ....+|.++.+++.+.. +.....+ ++-+....
T Consensus 211 ~-~-~~~~d~-----------~~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~-~~~~~~yl~~~d~t~~GSR~g~~~ 275 (380)
T PRK02769 211 N-N-PPPFSF-----------ADGIDSIAISGHKFIG-SPMPCGIVLAKKKYVER-ISVDVDYIGSRDQTISGSRNGHTA 275 (380)
T ss_pred C-c-cccCCc-----------cCCCCEEEECCcccCC-CCCCcEEEEEehhhhhh-cccCccccCCCCCCccCCCCcHHH
Confidence 0 0 000011 1134456789999887 44568999886554332 2111111 11222222
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCe
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI 390 (464)
.++-..++.-. ..-+++..+...+..+++.+.|++.|+++........+.++.+. ..+. .|.
T Consensus 276 l~lw~aL~~lg--~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~~~~--------------~~~~--~~w 337 (380)
T PRK02769 276 LLLWAAIRSLG--SKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFPCPS--------------ERIW--KKW 337 (380)
T ss_pred HHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEcCCC--------------HHHH--hCe
Confidence 22222332211 23355666667777788999998888876653333455555442 0111 355
Q ss_pred EEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 391 NISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 391 ~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+.+. .+++||++.. ++++.++.+++.|...+....
T Consensus 338 ~l~~~-------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~ 374 (380)
T PRK02769 338 HLATS-------GNQAHIITMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred eEccc-------CCEEEEEECCCCCHHHHHHHHHHHHHHHhccc
Confidence 55432 2479999976 688899999999988777544
No 273
>PRK06541 hypothetical protein; Provisional
Probab=99.70 E-value=5.4e-14 Score=142.82 Aligned_cols=355 Identities=14% Similarity=0.105 Sum_probs=197.1
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.. ....+.......+.+..+|+.+.+...
T Consensus 45 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~-------------~~~~~~~~~~~~~~~~~la~~l~~~~p-- 109 (460)
T PRK06541 45 YIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAG-------------TLAFFPLWSYAHPPAIELAERLAALAP-- 109 (460)
T ss_pred EEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHh-------------hCcCccccccCCHHHHHHHHHHHHhCC--
Confidence 4445556778998765 2334 34667776666422 111111111123445556666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
...+.++++++++|++..+++.... ...+|+...-+|++....+....|. .+..+|..
T Consensus 110 --~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~ 187 (460)
T PRK06541 110 --GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNT 187 (460)
T ss_pred --CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCC
Confidence 1236899999999999998886421 1367888888887764332211111 11222211
Q ss_pred CCC---CcccC--------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccc
Q 037587 165 SSN---GFRIT--------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 165 ~~~---~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
..- .|.-+ ++.+++.+.. .+++..+.++..| .++.|.+.+ .+.++++.++|+++|+++|.||++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~ 264 (460)
T PRK06541 188 NFYRAPELGDDPEAFGRWAADRIEEAIEF---EGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI 264 (460)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHh---cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 000 01112 2455555542 1223345566667 889998765 788999999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHh-cc-----cCC
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKM-SS-----FGL 304 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~-~~-----~~~ 304 (464)
.+ |+..+..+ .. ... + ..+.+ -+|||.+| .|+ ++|+++++++ +.+.+... .. .+.
T Consensus 265 tG--fGR~G~~~-a~-~~~-g--------v~PDi---vt~gK~l~-~G~~pigav~~~~~-i~~~~~~~~~~~~~~~T~~ 326 (460)
T PRK06541 265 CA--FGRLGEMF-GC-ERF-G--------YVPDI---ITCAKGIT-SGYSPLGAMIASDR-LFEPFLDGPTMFLHGYTFG 326 (460)
T ss_pred hC--CCcCchhh-hh-hhc-C--------CCCCE---EEeccccc-CCccceeEEEEcHH-HHHHhhcCCCccccCCCCC
Confidence 76 43221011 11 110 0 11222 26999998 897 9999999554 44433221 11 112
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCee---ecCCccEEEEEecCcccccC-Ch-----
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRC---LKSNAGLFCWVDMRHLLVSN-TF----- 374 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~---~~~~~g~f~~~~l~~~~~~~-~~----- 374 (464)
.++++.+++.+.++--. -+...+.++++.++|.+.|+++ ...+ .... |.++-+++....... ..
T Consensus 327 gnp~~~aaala~l~~l~-----~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~ 400 (460)
T PRK06541 327 GHPVSAAVALANLDIFE-----REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDES 400 (460)
T ss_pred CCHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhh
Confidence 34555555555443211 1123344555556666666554 2221 3334 457777764211100 00
Q ss_pred h--HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 375 E--AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 ~--~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
. ....+...++ ++||++.+.. .+...+||+... ++++++++++++|.+++++.
T Consensus 401 ~~~~~~~~~~~l~-~~Gi~~~~~~----~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 401 ERLLRGFLSPALF-EAGLYCRADD----RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred hhhHHHHHHHHHH-hCCeEEEecC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0 0113445554 6799998631 124579999986 79999999999999998754
No 274
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.70 E-value=6.9e-14 Score=141.52 Aligned_cols=356 Identities=12% Similarity=0.076 Sum_probs=193.6
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.+..+. ...+....-..+....+|+.+.+....
T Consensus 47 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~-------------~~~~~~~~~~~~~~~~lAe~L~~~~p~- 112 (441)
T PRK05769 47 WVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEK-------------FLHYSLTDFYYEPAVELAERLVEIAPG- 112 (441)
T ss_pred EEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHh-------------ccCccCcccCCHHHHHHHHHHHHhCCC-
Confidence 4444556778898765 3333 346666666664221 111111111134556677776543210
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc-------------EEEEEecCCC--C
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHCSSS--N 167 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~~~~--~ 167 (464)
-..+.++++++++|++..+++... ....+|+...-+|++....+....+. .+..++.... .
T Consensus 113 --~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (441)
T PRK05769 113 --GFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN 190 (441)
T ss_pred --CCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccc
Confidence 013689999999999999987632 23467888888887765322111010 1222322110 0
Q ss_pred Ccc-cC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 168 GFR-IT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 168 ~~~-~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
.|. -+ ++.+++.+.+......++.+|++.-...-.|... +.+.++++.++|+++|+++|.||++.++...
T Consensus 191 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~ 270 (441)
T PRK05769 191 PWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT 270 (441)
T ss_pred cccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 011 01 2223332211000123566555543345567644 5778999999999999999999999874222
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-hcccCCCChHHHHHHHHH
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-MSSFGLVSSQTQYLLSRM 316 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-~~~~~~~s~~~q~~~~~~ 316 (464)
+. . .....+ . ..+.++ +|||.+| .|+++|+++++++ +...... ....+..++++++++.+.
T Consensus 271 G~--~-~a~~~~--g--------v~pDiv---t~~K~l~-~G~p~gav~~~~~-i~~~~~~~~~~T~~g~p~~~aaa~a~ 332 (441)
T PRK05769 271 GK--M-FAIEHF--G--------VEPDII---TLAKAIA-GGLPLGAVIGRAE-LMFLPPGSHANTFGGNPVAAAAALAT 332 (441)
T ss_pred cc--e-ehhhcc--C--------CCCCEE---EEccccc-CCcccEEEEEehh-hhhcCCCCCCCCCCcCHHHHHHHHHH
Confidence 22 1 111111 1 112233 6899998 8999999998544 4332221 111223467777777666
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEE
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v 392 (464)
|+-- ++ ...+.+++.-++|.+.|+++ ++......-|+++-+.+..............+...++ ++||++
T Consensus 333 L~~l---~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~ 405 (441)
T PRK05769 333 LEEL---EE---GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLL 405 (441)
T ss_pred HHHH---HH---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEE
Confidence 6432 11 23334444445555555443 3222222335677777743211111112234555554 679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.+. +...+|++... ++++++++++++|.+++.+
T Consensus 406 ~~~------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 406 LGA------GKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred ecC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 753 23569999876 7999999999999999865
No 275
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.69 E-value=7.9e-15 Score=158.73 Aligned_cols=309 Identities=13% Similarity=0.078 Sum_probs=190.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCC--cEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhh---cccCCCcEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPN--KLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRD---LKWRPGVEIV 159 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~ 159 (464)
..+.|+.||++++ ++++ .|++|+|+|+++++++..+ .++||.|++..-.|+..... ++.. |+++.
T Consensus 80 ~e~aR~~ia~~lg--------a~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~-G~~v~ 150 (805)
T PLN02724 80 IESARQQVLEYFN--------APPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEK-GAAAI 150 (805)
T ss_pred HHHHHHHHHHHhC--------CCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHc-CCeEE
Confidence 4678888888876 5554 5899999999999999887 67899999987777654433 2334 88998
Q ss_pred EEecCCCC------CcccCH--HHHHHHHHH----HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC-----C
Q 037587 160 PIHCSSSN------GFRITI--SALENAYQQ----AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK-----R 222 (464)
Q Consensus 160 ~v~~~~~~------~~~~d~--~~l~~~i~~----~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~-----~ 222 (464)
.++++... ...+++ +.+++.++. ....++++++|.++.-+|-||..+|.+.++.+.+.+..+ +
T Consensus 151 ~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~ 230 (805)
T PLN02724 151 AVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGR 230 (805)
T ss_pred eccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcc
Confidence 88875211 112222 455554321 011124668999999999999999987655544443222 3
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHh-c
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKM-S 300 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~-~ 300 (464)
+++++|.+.+- +.. ..++..+ +..+++.|++|.+| ..| +|+++.+++.+. .+... .
T Consensus 231 ~~v~vDaaQ~~---g~~---piDv~~~-------------~~Dfl~~S~HK~~GgP~G--~G~L~vr~~~~~-~l~p~~~ 288 (805)
T PLN02724 231 WMVLLDAAKGC---GTS---PPDLSRY-------------PADFVVVSFYKIFGYPTG--LGALLVRRDAAK-LLKKKYF 288 (805)
T ss_pred eEEEeehhhhc---CCC---CCChhhc-------------CCCEEEEecceeccCCCC--ceEEEEehhhhh-hhcCCcc
Confidence 67999998873 221 1233222 45678899999997 345 799988654332 22211 0
Q ss_pred -------------------------ccCCCChHHHHHHHHHcCCchhhHH-HHHHHHHHHHHHHHHHHHHHHhC------
Q 037587 301 -------------------------SFGLVSSQTQYLLSRMLSDKKFTCN-YMKENRKRLRKRKEMLVSGLKVA------ 348 (464)
Q Consensus 301 -------------------------~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~------ 348 (464)
-.++.+.....++.++++- +.+ .++...++..+..+++.+.|.++
T Consensus 289 GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~---l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~ 365 (805)
T PLN02724 289 GGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL---LNRLTISAIAMHTWALTHYVANSLRNLKHGNGA 365 (805)
T ss_pred CCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 0012333333333333321 111 23445566667777788888765
Q ss_pred -CCeeecCC---------ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-----------------
Q 037587 349 -GIRCLKSN---------AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN----------------- 401 (464)
Q Consensus 349 -g~~~~~~~---------~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~----------------- 401 (464)
++.++.+. ++ .+.+.+... ....+. . ..+..++.++||.++.|..|.+.
T Consensus 366 ~~v~iyg~~~~~~~~~~r~~-ivsFnv~~~-~~~~v~-~-~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~ 441 (805)
T PLN02724 366 PVCVLYGNHTFKLEFHIQGP-IVTFNLKRA-DGSWVG-H-REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANF 441 (805)
T ss_pred eEEEEcCCCCCCCCcccccC-EEEEEEEcC-CCCEeC-H-HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHh
Confidence 35666432 23 343444321 111111 1 12456677889999998876531
Q ss_pred ----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 402 ----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 402 ----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..|.+|+|++. .+.++++.+++.|++.....
T Consensus 442 ~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 442 EAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred hcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 12789999998 78999999999999976544
No 276
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.69 E-value=5.2e-15 Score=138.57 Aligned_cols=299 Identities=15% Similarity=0.123 Sum_probs=198.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.-+|...+|++.++ +..+ +.++---+.+..+..|. -||=.|+...-.+..+...++.. +++-..+.-
T Consensus 218 hv~LE~eLA~LHqK---------~aAL-lFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns-~v~K~IFrH 286 (570)
T KOG1360|consen 218 HVRLEAELADLHQK---------EAAL-LFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNS-RVPKHIFRH 286 (570)
T ss_pred hhhHHHHHHHHhcC---------ccee-eeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhc-CCcceeecc
Confidence 46888888888863 2222 22222223333333332 27777777777777776666655 554433331
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
-|++.|++.+.+... ..+|+|-+...+..+|.+-| +++|++++.++|.+.++||+++-..|+..+.
T Consensus 287 -------ND~~hL~~lL~~~~~--svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~rGa-- 352 (570)
T KOG1360|consen 287 -------NDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPRGA-- 352 (570)
T ss_pred -------CCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCCCC--
Confidence 278999999876422 35788888889999999976 6678999999999999999998776765421
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-cC-C--CChHHHHHHHH---H
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-FG-L--VSSQTQYLLSR---M 316 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~~-~--~s~~~q~~~~~---~ 316 (464)
.+.+- + +-.....|+-+++.|+||+-| |||.+ ...+.+.++.+.. |. + .++.....+.. .
T Consensus 353 -Gvger-d-------Gvm~kvDiIsGTLgKafGcVG---GYIAa-t~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~ 419 (570)
T KOG1360|consen 353 -GVGER-D-------GVMHKVDIISGTLGKAFGCVG---GYIAA-TRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRI 419 (570)
T ss_pred -Ccccc-C-------Ccchhhhhcccchhhhccccc---ceehh-hhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHH
Confidence 11111 0 112345577899999999988 99988 4556777776643 22 1 22222222222 2
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
|...+ -+..|...++...++.+.|.+.|++|.+.... .+-+.+..... ..+.+..|+.++||+|..-.
T Consensus 420 lk~~e-----g~~lR~~hqrnv~~~kq~l~~~GiPVi~~pSH-IiPv~vgda~l------~~~~sd~Li~~h~iYvQaIN 487 (570)
T KOG1360|consen 420 LKSEE-----GRVLRRQHQRNVKYVKQLLMELGIPVIPNPSH-IIPVRVGDAAL------AKQASDILISKHNIYVQAIN 487 (570)
T ss_pred Hhhhh-----hHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc-eeeeeccCHHH------HHHHHHHHHHhcCeEEEecc
Confidence 22221 24456677788899999999999999987764 67677654321 23577888999999997554
Q ss_pred CCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 397 SCH-CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 397 ~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
... +.+...+||+.+. .+++.++.+++.|..++++.+-
T Consensus 488 yPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~l 527 (570)
T KOG1360|consen 488 YPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVGL 527 (570)
T ss_pred CCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 333 2345579998865 5889999999999999988874
No 277
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.2e-14 Score=131.45 Aligned_cols=334 Identities=15% Similarity=0.184 Sum_probs=208.0
Q ss_pred eEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC
Q 037587 38 IIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAG 117 (464)
Q Consensus 38 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G 117 (464)
.+||-++.-..|.+..++++..+. -.-.-|+......+|.+.+|+.+++ ..-+++++|
T Consensus 23 ~vDLRSDTvT~PTdeMr~am~eA~-------------vgDdVyGeD~tt~rLE~~vA~l~GK---------EAgLFv~SG 80 (384)
T KOG1368|consen 23 SVDLRSDTVTVPTDEMRRAMAEAS-------------VGDDVYGEDPTTNRLEQRVAELFGK---------EAGLFVPSG 80 (384)
T ss_pred ccccccccccCChHHHHHHHhhcc-------------cCcccccCCccHHHHHHHHHHHhCc---------cceeeeccc
Confidence 367777766667777777665531 1223455444568999999999874 334677777
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh--cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh--hcCCceEEE
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPGFDRD--LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ--TLNLKVKGV 193 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--~~~~~~~~v 193 (464)
+...+-.++..+-++|..|++.+-++--..+. +....|+.+.++... ++..+++++++++++.-. -..+.+++|
T Consensus 81 TmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LI 158 (384)
T KOG1368|consen 81 TMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLI 158 (384)
T ss_pred ccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEE
Confidence 66666555555666999999998876422222 223347777777643 455689999999997321 123578999
Q ss_pred EEeCCCCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 194 LITNPSNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 194 il~~P~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
++.|-+|-+| .++|.+++.++.++|++||+.+..|.+-. |+..-..-.++..+.... +.|- -.||
T Consensus 159 clENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi---~NAavasgV~vk~i~~~f---------DSVs--iCLS 224 (384)
T KOG1368|consen 159 CLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI---FNAAVASGVPVKKICSAF---------DSVS--ICLS 224 (384)
T ss_pred EeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh---hhHHHHcCCCHHHHHHhh---------hhhh--hhhh
Confidence 9999987777 99999999999999999999999999875 542200113444444322 2222 2789
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHh-cccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKM-SSFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|.+|.| +|.++..++..+...+.. ...+ --+.+..+++..+|++. ....+. -.++...+.+.+...
T Consensus 225 KglgAP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~------~~~L~~-dHk~A~~lAe~~~~~ 294 (384)
T KOG1368|consen 225 KGLGAP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDEN------VPLLRA-DHKRAKELAEYINTP 294 (384)
T ss_pred ccCCCC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcc------hHHHHH-HHHHHHHHHHHhccc
Confidence 998744 677654444443333222 2221 12223333333333321 122222 223445667777666
Q ss_pred C-Ceeec--CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHH
Q 037587 349 G-IRCLK--SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQR 424 (464)
Q Consensus 349 g-~~~~~--~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~ 424 (464)
+ +++.. .+.+ ++.+.+.+.- ....+++..+ +++||.+.+|..+ .+||.+.. +++++++.++..
T Consensus 295 ~~i~v~v~a~etN-iv~~~l~q~~-----~~~~~l~~~~-~k~gi~lm~~~s~------r~Rivlh~Qvt~~~ve~~~~~ 361 (384)
T KOG1368|consen 295 EEIRVEVPAVETN-IVNMVLCQAR-----LTAEELCKFL-EKNGILLMGGASR------RIRIVLHHQVTDEDVEYVKSV 361 (384)
T ss_pred cceeeecchhhcc-eeeeeccccc-----CCHHHHHHHH-HHCCeEEeecccc------ceEEEEEEecCHHHHHHHHHH
Confidence 4 66543 3565 6766664321 1123566665 6889999987643 48999988 899999999999
Q ss_pred H-HHHHHhh
Q 037587 425 I-KVFAQSC 432 (464)
Q Consensus 425 l-~~~l~~~ 432 (464)
+ +.++...
T Consensus 362 ~~k~~~~q~ 370 (384)
T KOG1368|consen 362 LSKKFLKQL 370 (384)
T ss_pred HHHHHHhhc
Confidence 9 4444443
No 278
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=6.8e-14 Score=140.84 Aligned_cols=342 Identities=11% Similarity=0.026 Sum_probs=194.5
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+ .+.+ ..|.+.+++.++.+. ......|- ..+.+..+|+.+.+...
T Consensus 68 ~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~----------l~~~~~~~----~~~~~~~lAe~L~~~~p-- 131 (442)
T TIGR03372 68 TLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAK----------QPLHSQEL----LDPLRALLAKTLAALTP-- 131 (442)
T ss_pred EEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHh----------CCCccccc----CCHHHHHHHHHHHHhCC--
Confidence 4444556778998766 4444 346677776664321 11112221 14445556666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCeEEEcCCCCCChhhhcccCCCcE------------EEEEecCCCC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-----PGDAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHCSSSN 167 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-----~gd~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 167 (464)
-..+.++++++++|+++.+++.... ...+|+....+|++....+....+-. +..+|.
T Consensus 132 --~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~---- 205 (442)
T TIGR03372 132 --GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF---- 205 (442)
T ss_pred --CCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC----
Confidence 1235799999999999999886421 23578988988887653322221211 111221
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccch
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISI 246 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~ 246 (464)
.|.+.+++.++.....+.++.+|++..-..-.|... |.+.++++.++|+++|+++|.||++.+ |+..+ .+...
T Consensus 206 ---~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG--~GRtG-~~~a~ 279 (442)
T TIGR03372 206 ---GDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTG--MGRTG-KMFAC 279 (442)
T ss_pred ---CCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccC--CCccc-cchhh
Confidence 256777777754332334666666543355567655 677799999999999999999999976 44331 11111
Q ss_pred hhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh----cccCCCChHHHHHHHHHcC---
Q 037587 247 MEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM----SSFGLVSSQTQYLLSRMLS--- 318 (464)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~--- 318 (464)
+.. + ..+. +-+|+|.+| .| +.+|.++++ +.+.+.+... ...+..++++.+++.+.|+
T Consensus 280 -e~~-g--------v~PD---ivt~gK~lg-~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~ 344 (442)
T TIGR03372 280 -EHE-G--------VQPD---ILCLAKALG-GGVMPIGATIAT-EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELL 344 (442)
T ss_pred -hhc-C--------CCCC---eeeehhhhc-CCcccceEEEec-HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 110 0 1122 236999998 88 699999985 4455544211 1112245666666665554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-C-eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-I-RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+.++ .++.+++-+.+++. |.+...++. . .-.. .-|+++.+.+... .....++..++ ++||++.+..
T Consensus 345 ~~~l-~~~~~~~G~~l~~~---L~~l~~~~~~~i~~vR-G~Gl~~giel~~~------~~~~~i~~~l~-~~Gvl~~~~~ 412 (442)
T TIGR03372 345 EKNL-PAQAAIKGDFLLDG---FQQLAAEYPDLIIEAR-GKGLLMAIEFRDN------EIGYAFAKELF-QQNILVAGTL 412 (442)
T ss_pred hccH-HHHHHHHHHHHHHH---HHHHHHhCCCceEEEe-cceEEEEEEeCCh------HHHHHHHHHHH-HCCcEEeecC
Confidence 2222 22222222222222 222222222 1 1122 3467888888642 11234666665 6799997532
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
. ..+.+||.... ++++++++++++|.+++
T Consensus 413 ~----~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 413 N----NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred C----CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 1 13579999876 79999999999998763
No 279
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.69 E-value=5.9e-14 Score=135.84 Aligned_cols=345 Identities=14% Similarity=0.116 Sum_probs=207.4
Q ss_pred CCCCCCCCceEEeecccccc----cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQL----SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+-.....||+..+--++ .+|.+.+++++.. ..-..|..+ .++.-.+|+.+.+...
T Consensus 46 ~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l-------------~~G~~fg~P---te~Ei~~Aell~~~~p-- 107 (432)
T COG0001 46 YLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQL-------------ERGLSFGAP---TELEVELAELLIERVP-- 107 (432)
T ss_pred eEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHH-------------HhcCCCCCC---CHHHHHHHHHHHHhcC--
Confidence 44444556788888764443 3467888877753 333556643 4555566666655422
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCC-------------c------EEEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPG-------------V------EIVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g-------------~------~~~~v~~ 163 (464)
.-+.|-++|++|||...+++.. ...-|+|+..+-||++....+....| + .++.+|.
T Consensus 108 ---~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y 184 (432)
T COG0001 108 ---SIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY 184 (432)
T ss_pred ---cccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC
Confidence 3488999999999999988864 22348999999999877655332112 1 1222332
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNP--SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+ |++.+++++++. +.++.+|++ -| .| .|.+. .++.+++|.++|+++|+++|.||+..++...-.
T Consensus 185 N-------D~~al~~~~~~~---g~~IAaVIv-EPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~g- 251 (432)
T COG0001 185 N-------DLEALEEAFEEY---GDDIAAVIV-EPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALG- 251 (432)
T ss_pred C-------CHHHHHHHHHHc---CCcEEEEEe-ccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCc-
Confidence 2 789999998763 346665555 45 45 45544 455699999999999999999999987544322
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-c----CCCChHHHHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-F----GLVSSQTQYLLSR 315 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~----~~~s~~~q~~~~~ 315 (464)
.......+.+ -+.+|.|+.| .|+.+|.+.++ +++.+.+..... + .+-++++..|..+
T Consensus 252 -Gaq~~~gi~P---------------DlttlGKiIG-GGlP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnplamaAG~a 313 (432)
T COG0001 252 -GAQGYYGVEP---------------DLTTLGKIIG-GGLPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLA 313 (432)
T ss_pred -ccccccCcCc---------------chhhhhhhhc-CCcceeeeccH-HHHHhhhCCCCCccccCCCCCcHHHHHHHHH
Confidence 2233333322 3669999999 99999998884 445443332221 1 2345666666665
Q ss_pred HcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccEEEEEecCccc------ccCChhHHHHHHHHHHHhc
Q 037587 316 MLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGLFCWVDMRHLL------VSNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~f~~~~l~~~~------~~~~~~~~~~l~~~ll~~~ 388 (464)
.+..-.--....+++.+.-.+.++-+.+.+.++|+++... .+++|-..-.+... ...+.+.-..+...|| ++
T Consensus 314 tl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~ 392 (432)
T COG0001 314 TLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NR 392 (432)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hC
Confidence 5542110000122222222333344555555667766543 34444333222111 0011122345666666 56
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 389 GLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
||++.|+.. ...=+|.. .++++++..++++.+++++..
T Consensus 393 GV~l~ps~~------ea~flS~a-hte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 393 GVYLAPSQF------EAGFLSTA-HTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CcccCCccc------cceeeecc-cCHHHHHHHHHHHHHHHHHhh
Confidence 999987641 12346666 489999999999998887653
No 280
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=6.1e-14 Score=132.44 Aligned_cols=313 Identities=14% Similarity=0.156 Sum_probs=202.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc--CCC--
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW--RPG-- 155 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~--~~g-- 155 (464)
|+-..-.+++.....++.++.+| ++..||-..+|++ |+..++.+|++|||+|+-.+-.++++...... ..|
T Consensus 64 YgGce~VD~vE~laierak~LFg----a~~anVQPhSGs~-AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~ 138 (413)
T COG0112 64 YGGCEYVDEVEELAIERAKKLFG----AEYANVQPHSGSQ-ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKL 138 (413)
T ss_pred cCCCeeHHHHHHHHHHHHHHHhC----CCccccCCCCchH-HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCcccee
Confidence 33333345555555566666666 6777888877765 56667789999999999999888877544311 113
Q ss_pred cEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 156 VEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 156 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
.+++.++++++ ...+|.|++++...+. +||+|+.-...-| ..+ +++++.++|.+-|.++++|-++....
T Consensus 139 ~~~v~Y~vd~e-t~~IDyD~~~k~a~e~-----kPK~ii~G~SaY~--r~i---d~~~~reIad~VGA~L~~DmAHiaGL 207 (413)
T COG0112 139 FNVVSYGVDPE-TGLIDYDEVEKLAKEV-----KPKLIIAGGSAYS--RPI---DFKRFREIADEVGAYLMVDMAHVAGL 207 (413)
T ss_pred EEeEecccccc-cCccCHHHHHHHHHHh-----CCCEEEECccccc--ccc---CHHHHHHHHHHhCceEEehHHHHHHH
Confidence 35667777754 4579999999998875 8997766422222 223 46666777778899999999996443
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCC-ChHHHHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLV-SSQTQYLLS 314 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~-s~~~q~~~~ 314 (464)
..+. .+++... ...++..|.+|+| .|-|-|.|++.++++.+.+++.--++.. ++..-.+++
T Consensus 208 VA~G--~~p~P~~--------------~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg~qggpl~HviAa 269 (413)
T COG0112 208 IAGG--VHPNPLP--------------HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAA 269 (413)
T ss_pred Hhcc--cCCCCCC--------------ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCccCCChHHHHHHH
Confidence 3333 2233221 2457789999998 7889999999776777777664434333 332222222
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc-cEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEE
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNA-GLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v 392 (464)
.+..-.+.++..+++..+++.++.+.|.+.|.+.|+++....+ +..+.+++... ... +.+..+|.+.||.+
T Consensus 270 kaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~G-------k~ae~~L~~~~It~ 342 (413)
T COG0112 270 KAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTG-------KKAEAALERAGITV 342 (413)
T ss_pred HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCH-------HHHHHHHHHcCEee
Confidence 2222111111223444556667888899999999999876433 45667888732 122 24567788889998
Q ss_pred e----CCCCCCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHhhC
Q 037587 393 S----PGSSCHCNEPGWFRICFAN-----ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 393 ~----pg~~f~~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. |...-.+..+..+||.... ..++++++..+.|.+++...+
T Consensus 343 NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 343 NKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 5 3332222235569998744 357899999999999998766
No 281
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=8.2e-14 Score=141.19 Aligned_cols=351 Identities=11% Similarity=0.066 Sum_probs=197.9
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...+... ...+.+..+|+.+.+...
T Consensus 75 ~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~-------------l~~~~~~-~~~~~~~~lae~L~~~~p-- 138 (459)
T PRK11522 75 TLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAK-------------QPLHSQE-LLDPLRAMLAKTLAALTP-- 138 (459)
T ss_pred EEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhh-------------Ccccccc-cCCHHHHHHHHHHHHhCC--
Confidence 4444456678888766 4444 346677777665321 1111111 124555666666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--C--CC-CeEEEcCCCCCChhhhcccCCCcEEEE---EecCCC---CCcccCH
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--D--PG-DAFLLPTPYYPGFDRDLKWRPGVEIVP---IHCSSS---NGFRITI 173 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~--~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~---v~~~~~---~~~~~d~ 173 (464)
-..+.++++++++|++..+++... . +| ..|+...-+|++....+....|..... .|..+. -.| .|.
T Consensus 139 --~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~ 215 (459)
T PRK11522 139 --GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNI 215 (459)
T ss_pred --CCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCH
Confidence 123589999999999999988642 1 12 368888888887654332211211111 111000 001 167
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhc
Q 037587 174 SALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252 (464)
Q Consensus 174 ~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~ 252 (464)
+.+++.++.....+.++.+|++.....-.|... |.+.++++.++|+++|+++|.||++.+ |+..+ ..... +.. +
T Consensus 216 ~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG-~~~a~-e~~-g 290 (459)
T PRK11522 216 EAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTG--MGRTG-KMFAC-EHE-N 290 (459)
T ss_pred HHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceec--CCccc-hhhhh-hcc-C
Confidence 888888765432334566655553355567654 666799999999999999999999976 43221 11111 110 0
Q ss_pred cCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh----cccCCCChHHHHHHHHHcCCchhhHHHH
Q 037587 253 RNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM----SSFGLVSSQTQYLLSRMLSDKKFTCNYM 327 (464)
Q Consensus 253 ~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 327 (464)
..+. +-+|+|.+| .| +.+|.+++.+ .+.+.+... ...+..++++.+++.+.|+--+- +
T Consensus 291 --------v~PD---ivt~gK~lg-gG~~Pigav~~~~-~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~--- 353 (459)
T PRK11522 291 --------VQPD---ILCLAKALG-GGVMPIGATIATE-EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-Q--- 353 (459)
T ss_pred --------CCCC---EEEechhhh-CCCccceeEEEcH-HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-c---
Confidence 1122 238999998 78 6999999854 444433211 11122366666665555442110 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----C-C-eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 328 KENRKRLRKRKEMLVSGLKVA----G-I-RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~~----g-~-~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
...+.+++.-++|.+.|+++ + + .-.. .-|.++.+.+... .....++..++ ++||++.+.. .
T Consensus 354 -~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~Vr-G~Gl~~giel~~~------~~~~~i~~~l~-~~Gvl~~~~~----~ 420 (459)
T PRK11522 354 -NLPAQAEQKGDYLLDGFRQLAREYPDLVQEAR-GKGMLMAIEFVDN------EIGYNFASEMF-RQRVLVAGTL----N 420 (459)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEE-eceeEEEEEecCc------hHHHHHHHHHH-HCCeEEEecC----C
Confidence 11223333333444444432 2 1 1112 2367888887542 11224566665 6799997542 1
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 402 EPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
....+|++.+. ++++++++++++|.+++++..
T Consensus 421 ~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 421 NAKTIRIEPPLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 24679999876 799999999999999987654
No 282
>PLN02880 tyrosine decarboxylase
Probab=99.68 E-value=3.6e-14 Score=144.87 Aligned_cols=323 Identities=11% Similarity=0.069 Sum_probs=201.2
Q ss_pred CCCcHHHHHHHHHHHHHHcCCCCCCC---CCcEEEeCChHHHHHHHHHHhcC-----------CCCeEEEcCCCCCChhh
Q 037587 83 YHGFPDAKKELVKLMARIRGNKVKFD---PNKLVLTAGSTAANETLMFCLAD-----------PGDAFLLPTPYYPGFDR 148 (464)
Q Consensus 83 ~~g~~~lr~~ia~~~~~~~~~~~~~~---~~~i~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~ 148 (464)
..+..++.+.+.+++.+.+|.+-... ...-++|+|+|+++..++.+..+ +.-.|++.+-+|.....
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~K 196 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQK 196 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHH
Confidence 34567888999999988877321000 02367899999998777655321 11245667777887888
Q ss_pred hcccCCCcE---EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE
Q 037587 149 DLKWRPGVE---IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI 225 (464)
Q Consensus 149 ~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l 225 (464)
++..+ |+. ++.+|++..+++.+|++.|+++|++..+.+..+-+|+.+-...+||.+- .+++|.++|+++|+|+
T Consensus 197 aa~~l-Glg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD---pl~eI~~i~~~~~iwl 272 (490)
T PLN02880 197 ACQIA-GIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD---PLLELGKIAKSNGMWF 272 (490)
T ss_pred HHHHc-CCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC---cHHHHHHHHHHcCCEE
Confidence 88877 874 7888987656789999999999987666666676666676788999995 5777888999999999
Q ss_pred EEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH-HHHHHHhcccC-
Q 037587 226 VSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV-VSAATKMSSFG- 303 (464)
Q Consensus 226 I~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-~~~~~~~~~~~- 303 (464)
.+|.+|+......+ . ....+..+ .....+..+++|.++ ...-+|.++.++... ...+.....|.
T Consensus 273 HVDaA~gg~~~~~~--~---~~~~l~gi--------e~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~~~~~~~Yl~ 338 (490)
T PLN02880 273 HVDAAYAGSACICP--E---YRHYIDGV--------EEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQSLSTNPEFLK 338 (490)
T ss_pred EEehhhHHHHHhCH--H---HHHHhcCc--------hhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHHHccCHHHhc
Confidence 99999987543222 1 11122211 123456779999985 777899998865332 22221111110
Q ss_pred ---------------CC-C-----hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCccEE
Q 037587 304 ---------------LV-S-----SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-SNAGLF 360 (464)
Q Consensus 304 ---------------~~-s-----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~g~f 360 (464)
++ . .+...+....+. .+.+++..+..-+..+++.+.+++. ++++.. +..+ .
T Consensus 339 ~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G-----~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~-i 412 (490)
T PLN02880 339 NKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----VENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFS-L 412 (490)
T ss_pred CccccccCCCChhccCcCCCCcccHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceE-E
Confidence 00 0 111111112222 2234444444446667778888765 777654 4554 5
Q ss_pred EEEecCcc-cccCChh-HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhh
Q 037587 361 CWVDMRHL-LVSNTFE-AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 361 ~~~~l~~~-~~~~~~~-~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~ 432 (464)
+.++++.. ......+ -..++.+++.++..+.+.+... .+..++|+++.. .++++++.+++.|.++.++.
T Consensus 413 v~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~---~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 413 VCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVL---SGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred EEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56666532 1111001 1124566666555666654332 235689999976 45799999999999887664
No 283
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.68 E-value=1.1e-14 Score=142.82 Aligned_cols=287 Identities=15% Similarity=0.124 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHcCCCCCC-CCCcEEEeCC-hHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKF-DPNKLVLTAG-STAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G-~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~~ 163 (464)
++-+.+.+.+.+.++ . +..+|+++.| +|++++.++..++.+|+++++...+..+. ...++.. |+ +..+..
T Consensus 37 ~~~~~~~~~l~~l~~----~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~-g~-~~~~~~ 110 (349)
T TIGR01364 37 AVANEAESDLRELLN----IPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKY-GV-VNVVAS 110 (349)
T ss_pred HHHHHHHHHHHHHhC----CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CC-cEEEec
Confidence 444444444554444 3 2346888877 99999999999999999988887765432 3335555 88 666665
Q ss_pred CCCCCc--ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SSSNGF--RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
++..+| .++++.++. .+++++|.+++-.|.||...+ ++++.+++++|+|.+.+ ++..
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~~~~v~~th~ETstGv~~~--------~l~~~~~~l~iVDavss---~g~~-- 169 (349)
T TIGR01364 111 GKEGNYTKIPDPSTWEI--------SEDAAYVHYCANETIHGVEFR--------ELPDVKNAPLVADMSSN---ILSR-- 169 (349)
T ss_pred cccCCCCCCCCHHhcCC--------CCCCCEEEEcCCCCcccEecc--------eecccCCCeEEEEcccc---ccCc--
Confidence 422222 345554442 237899999999999999865 45556799999999987 4433
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH---------H----HhcccCCCChH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA---------T----KMSSFGLVSSQ 308 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~---------~----~~~~~~~~s~~ 308 (464)
+ .++..+ + +++.|..|.+|.+| +|+++.+++.+.+.. . ....+++++..
T Consensus 170 ~-id~~~~-------------d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~ 231 (349)
T TIGR01364 170 P-IDVSKF-------------G--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTF 231 (349)
T ss_pred c-CCHHHc-------------c--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHH
Confidence 1 232221 3 77899999999777 788888555443210 0 01123344445
Q ss_pred HHHHHHHHcCCchhhHH-HHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----CccEEEEEecCcccccCChhHHHHHHH
Q 037587 309 TQYLLSRMLSDKKFTCN-YMKENRKRLRKRKEMLVSGLKVA-GIRCLKS----NAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 309 ~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
...++.++|+.-. +. -++...++.++..+++.+.|+++ |+..... ..+..+.+.++.. . . ..++..
T Consensus 232 ~i~al~~al~~l~--~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----~-~-~~~~~~ 303 (349)
T TIGR01364 232 AIYVSGLVFKWLK--EQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----E-L-EKRFLK 303 (349)
T ss_pred HHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----h-H-hHHHHH
Confidence 5555555554211 22 26777788888999999999998 5533321 2323455555532 1 1 123434
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
. +.++|+.+.+|.. ..+.+|+|+.. .++|+++.++++|+++++++
T Consensus 304 ~-~~~~Gi~~~~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~~ 349 (349)
T TIGR01364 304 E-AEERGLVSLKGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKKH 349 (349)
T ss_pred H-HHHCCCcccCCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHhC
Confidence 3 4568997777754 24689999977 78999999999999988764
No 284
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=2e-14 Score=154.93 Aligned_cols=318 Identities=14% Similarity=0.135 Sum_probs=205.4
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----eEEEcCCC
Q 037587 75 RELALFQDY---HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGST----AANETLMFCLADP-GD----AFLLPTPY 142 (464)
Q Consensus 75 ~~~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~----~al~~~~~~l~~~-gd----~Vlv~~p~ 142 (464)
..++-|.|. +|+.++...+.+.+.+..| .+.|.++.+++ +++.++++++.++ || .|+++...
T Consensus 552 ~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g------~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~a 625 (993)
T PLN02414 552 ANIHPFAPVDQAQGYQEMFEDLGDLLCEITG------FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSA 625 (993)
T ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC------CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCc
Confidence 444555443 3555444444444444433 38899999999 8999999999866 88 89999998
Q ss_pred CCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 143 YPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 143 y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
|......+... |++++.++++. +..+|+++|++.+++. ..++++|++++|+|-+|.. +.+++|+++|+++|
T Consensus 626 H~sn~a~a~~~-G~~vv~v~~d~--~G~vDle~L~~~i~~~---~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~G 696 (993)
T PLN02414 626 HGTNPASAAMC-GMKIVVVGTDA--KGNINIEELRKAAEAH---KDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNG 696 (993)
T ss_pred CccCHHHHHHC-CCEEEEeccCC--CCCcCHHHHHHHHhcc---CCCeEEEEEECCCcccccc---chHHHHHHHHHHcC
Confidence 98777777665 99999999874 3478999999998731 1268899999999999988 45888999999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC----CCccEEEEEEecCHHHHHHHHH
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS----MPGFRVGMIYSNNERVVSAATK 298 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g----~~GlRiG~l~~~~~~~~~~~~~ 298 (464)
+++++|.++...... . .... ..+..+++.|.+|+|+ ..|-.+|++.+.+ .+...+-.
T Consensus 697 alv~vDgAq~~a~~~-l----~~p~-------------~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~-~L~p~lPg 757 (993)
T PLN02414 697 GQVYMDGANMNAQVG-L----TSPG-------------FIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPS 757 (993)
T ss_pred CEEEEEecCHHhccC-c----CCcc-------------ccCCCEEEecCCccCCcCcccCCCCeeeEEEch-hhcccCCC
Confidence 999999998532111 1 1111 2256678889999775 2345589988744 33222110
Q ss_pred ------------hcc--cCCCCh------HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc
Q 037587 299 ------------MSS--FGLVSS------QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNA 357 (464)
Q Consensus 299 ------------~~~--~~~~s~------~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~ 357 (464)
... .++++. ....++..++.... .+.+++..+....+.+++.+.|.+. ++.+..+.+
T Consensus 758 ~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG--~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~ 835 (993)
T PLN02414 758 HPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMG--SEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNG 835 (993)
T ss_pred CccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHC--HhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCC
Confidence 010 122221 12222223333222 3446666666777788888888763 444433333
Q ss_pred cEE--EEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 358 GLF--CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 358 g~f--~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+| +.++++....... ....++.++|+ ++||...- ..|. ..+++||+.+. .+++++++++++|..+.++.+
T Consensus 836 ~~~hEfv~~~~~l~~~~g-~~~~di~krL~-d~Gihapt-~~~p--v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 836 TCAHEFIIDLRPFKNTAG-IEPEDVAKRLM-DYGFHAPT-MSWP--VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred CeeeeEEEeccccccccC-CCHHHHHHHHH-HcCcEEee-eccc--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 211 2245542211111 11246888887 78998643 3342 47789999976 689999999999988876655
No 285
>PLN02590 probable tyrosine decarboxylase
Probab=99.68 E-value=9.7e-14 Score=141.81 Aligned_cols=327 Identities=12% Similarity=0.091 Sum_probs=205.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCC---CCCcEEEeCChHHHHHHHHHHhcC-----------CCCeEEEcCCCCCC
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKF---DPNKLVLTAGSTAANETLMFCLAD-----------PGDAFLLPTPYYPG 145 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~~~i~it~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y~~ 145 (464)
|....+..++.+.+.+++.+.+|.+-.. ....=++++|+++++..++.+..+ +.-.|++.+-+|..
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S 241 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSS 241 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHH
Confidence 4344456889999999999887732110 012357789999988877665321 11245567777887
Q ss_pred hhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 146 FDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 146 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
+..++..+ |+ .++.+|++..+.+.+|+++|+++|++..+.+..+-+|+.+-....||.+ +.+++|.++|+++|
T Consensus 242 v~KAa~il-Glg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---Dpl~~Ia~i~~~~g 317 (539)
T PLN02590 242 FRKACLIG-GIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---DPLVPLGNIAKKYG 317 (539)
T ss_pred HHHHHHHc-CCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhC
Confidence 88888776 87 5888998866678999999999998765566666666667778899998 67888999999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHH-HHHHHHHhcc
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNER-VVSAATKMSS 301 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~-~~~~~~~~~~ 301 (464)
+|+.+|.+|+++....+ . ...+...+ ....-+...++|.+. ...-+|.++.+++. +...+.....
T Consensus 318 ~WlHVDaA~GG~al~~~--~---~r~~~~Gi--------e~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~a~~~~~~ 383 (539)
T PLN02590 318 IWLHVDAAYAGNACICP--E---YRKFIDGI--------ENADSFNMNAHKWLF-ANQTCSPLWVKDRYSLIDALKTNPE 383 (539)
T ss_pred CeEEEecchhhhhhcCh--h---hHHHhcCC--------ccCCEEEECchhhcC-cCcCEEEEEecCHHHHHHHhhcCHH
Confidence 99999999998643222 1 22232221 122334569999986 67789988886543 2222211000
Q ss_pred c----------------CC--CC----hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCc
Q 037587 302 F----------------GL--VS----SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-SNA 357 (464)
Q Consensus 302 ~----------------~~--~s----~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~ 357 (464)
| ++ .+ .+...++...+. .+-+++..+..-+..+++.+.+++. ++++.. +.-
T Consensus 384 YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G-----~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l 458 (539)
T PLN02590 384 YLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYG-----SENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF 458 (539)
T ss_pred HhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCce
Confidence 0 00 11 112222222222 3345555555666778888888776 677654 444
Q ss_pred cEEEEEecCcc-cccCCh-hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 358 GLFCWVDMRHL-LVSNTF-EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 358 g~f~~~~l~~~-~~~~~~-~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+ .+.+++... ...... ....++.+++.++..+.+.+... .+..++|+++.. .++++++.+++.|.+...+.-
T Consensus 459 ~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~---~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 459 S-LVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTAL---SGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred E-EEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEE---CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4 444555321 111000 11234666665443444544332 234589999976 578999999999998876654
No 286
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=1.2e-13 Score=140.29 Aligned_cols=286 Identities=14% Similarity=0.087 Sum_probs=167.1
Q ss_pred CCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh-h-----cccC-CCcE--EEEEecCCCCCcccCHHH
Q 037587 108 DPNKLVL---TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR-D-----LKWR-PGVE--IVPIHCSSSNGFRITISA 175 (464)
Q Consensus 108 ~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~-~-----~~~~-~g~~--~~~v~~~~~~~~~~d~~~ 175 (464)
..+.+++ .++++.++..++.++++|||+|+..+....++.. . .+.. .+.. ++++..+. ++..+|+++
T Consensus 96 ~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~ 174 (475)
T PLN03226 96 DPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDK 174 (475)
T ss_pred CcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHH
Confidence 4444433 3667788888999999999999986532222211 1 1111 0211 22333343 345689999
Q ss_pred HHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 176 LENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
|++.+.+. ++++|++. .++ +|...+ +++|.++|+++|+++++|+++.-...... ...+. .
T Consensus 175 Le~~l~~~-----~pklIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~--~~~~p---~----- 234 (475)
T PLN03226 175 LEKKAMLF-----RPKLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQ--EAASP---F----- 234 (475)
T ss_pred HHHHHhhc-----CCeEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCC--CCCCC---C-----
Confidence 99988642 66765553 333 666654 55777889999999999999975434332 11111 0
Q ss_pred CCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHH-------------HHHHHHhcc--cCCCChHHH-HHHHHHcC
Q 037587 256 DESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERV-------------VSAATKMSS--FGLVSSQTQ-YLLSRMLS 318 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~-------------~~~~~~~~~--~~~~s~~~q-~~~~~~l~ 318 (464)
....+++.|++|++ |..| |+++++++.. ....+.... +.+...+.+ .++..+++
T Consensus 235 ------~~~Div~~t~hK~L~GP~G---g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~ 305 (475)
T PLN03226 235 ------EYCDVVTTTTHKSLRGPRG---GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALK 305 (475)
T ss_pred ------CCCeEEEecCcccccCCCc---eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHH
Confidence 13447789999998 4444 8888854321 111221111 111112222 22223232
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ccEEEEEecCc-ccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN-AGLFCWVDMRH-LLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~f~~~~l~~-~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
.-. ....++.++++.++.++|.+.|.+.|+++..+. .+..+++++.. .... ......|++.||.+..+.
T Consensus 306 ~i~--~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~-------~~~~~~L~~~~I~~nk~~ 376 (475)
T PLN03226 306 QAM--TPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTG-------SRVEKVLDLAHITLNKNA 376 (475)
T ss_pred HHh--CcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCH-------HHHHHHHHHCCCEECCCC
Confidence 110 111344567777888889999998999987632 24567788742 2221 124555678899997654
Q ss_pred CCC---CCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHhh
Q 037587 397 SCH---CNEPGWFRICFAN-----ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 397 ~f~---~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~ 432 (464)
.++ +-.+..+|++... .++++++++.+.|.++++..
T Consensus 377 ~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 377 VPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 221 1124458984422 57899999999999999854
No 287
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=5.8e-14 Score=135.94 Aligned_cols=171 Identities=15% Similarity=0.278 Sum_probs=132.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
..++.+++|+|++ ....+.++++|.|+.+++.++ .+|||.|+++.-+|......+... |++++.+++|
T Consensus 36 v~~FE~~~ae~~G----------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~-Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLG----------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLV-GAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhC----------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHc-CCeEEEEecC
Confidence 4889999999985 456788999999999999965 589999999999998877777766 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCc
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSF 243 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~ 243 (464)
+ +.|.+|++.++++|.+ ++|+|+..+- -|... ++++|.++|++||++||+|.+++... |.+. ..
T Consensus 105 ~-~T~nid~~~ie~aIt~------~tKAIipVhl---~G~~~---dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk--~v 169 (374)
T COG0399 105 P-DTLNIDPDLIEAAITP------RTKAIIPVHL---AGQPC---DMDAIMALAKRHGLPVIEDAAQAHGATYKGK--KV 169 (374)
T ss_pred C-cccCCCHHHHHHHccc------CCeEEEEehh---ccCCC---CHHHHHHHHHHcCCeEEEEcchhccCeecCc--cc
Confidence 6 4689999999999976 7999988754 55553 57788888889999999999997322 2222 11
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCC--CcCCCCCccEEEEEEecCHHHHHHHHHhcc
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSL--SKDFSMPGFRVGMIYSNNERVVSAATKMSS 301 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~--SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~ 301 (464)
.+ + ..+.+.|| .|.++ .| --|.++++++.+.+.++.++.
T Consensus 170 Gt---~--------------Gd~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~ 210 (374)
T COG0399 170 GS---F--------------GDIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRN 210 (374)
T ss_pred cc---c--------------cceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHH
Confidence 11 1 22445677 79887 44 569999988888777765543
No 288
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=1e-13 Score=136.94 Aligned_cols=207 Identities=14% Similarity=0.139 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v~ 162 (464)
..|.+.||+.- ..+..+++++++.|+..++.+++++||.|+++...|.+....+ +.. |+++..++
T Consensus 65 ~~le~~la~LE----------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~-Gi~v~~vd 133 (395)
T PRK08114 65 FSLQEAMCELE----------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKL-GVTTTWFD 133 (395)
T ss_pred HHHHHHHHHHh----------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhc-CcEEEEEC
Confidence 45556666543 2456788888999999999999999999999998997766544 445 99988876
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEeccccccccCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Deay~~~~~~~~~ 240 (464)
. .|.+.+++.+++ ++++|++.+|.||+|.+. ++++|+++|+++ |+++|+|.+++-..+
T Consensus 134 ~-------~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~---DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 134 P-------LIGADIAKLIQP------NTKVVFLESPGSITMEVH---DVPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred C-------CCHHHHHHhcCC------CceEEEEECCCCCCCEee---cHHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 3 257888888754 789999999999999996 477788888887 499999999974211
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-cccC-CCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-SSFG-LVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-~~~~-~~s~~~q~~~~~~l 317 (464)
.....+ +..+++.|.+|.++-+| +-.|.++.+ +...+.++.. ...+ ..++.....+..-|
T Consensus 194 ---~~pl~~-------------GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl 256 (395)
T PRK08114 194 ---FKALDF-------------GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLRENSYLMGQMVDADTAYMTSRGL 256 (395)
T ss_pred ---cCHHHc-------------CCcEEEEcCcccccCCCcceeEEEEcC-HHHHHHHHHHHHhccCCCCHHHHHHHHcCC
Confidence 122222 56789999999875343 778877664 3333333322 2222 34555555444444
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+. +.-+.++..+....+.+.|+++
T Consensus 257 ~T-------L~lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 257 RT-------LGVRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred Cc-------HHHHHHHHHHHHHHHHHHHHcC
Confidence 43 3444556666778888888876
No 289
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=3.6e-13 Score=136.61 Aligned_cols=359 Identities=13% Similarity=0.048 Sum_probs=191.1
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...........+....+|+.+.+...
T Consensus 46 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~-------------~~~~~~~~~~~~~~~~lae~L~~~~p-- 110 (457)
T PRK05639 46 LIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVAL-------------IQHSMIGYTHSERAIRVAEKLAEISP-- 110 (457)
T ss_pred EEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHh-------------ccccccCccCCHHHHHHHHHHHhhCC--
Confidence 4444556778999765 2333 346677776664221 11110000112344455555543321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC--------c-----EEEEEecCCCC--
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG--------V-----EIVPIHCSSSN-- 167 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g--------~-----~~~~v~~~~~~-- 167 (464)
...+.+.++++++|++..+++... ....+|+....+|++....+....+ . .++.+|.....
T Consensus 111 --~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 188 (457)
T PRK05639 111 --IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRN 188 (457)
T ss_pred --CCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccc
Confidence 223689999999999999988742 2346788888888775432111101 0 12233322100
Q ss_pred Ccc----cCHHH--------HHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 168 GFR----ITISA--------LENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 168 ~~~----~d~~~--------l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
.|. -+.+. +++.+........++.+|++.-.....|.. .|.+.++++.++|+++|+++|.||++.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG- 267 (457)
T PRK05639 189 PWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTG- 267 (457)
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhc-
Confidence 000 02222 222221100113467666664224555764 4677899999999999999999999986
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-hcccCCCChHHHHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-MSSFGLVSSQTQYLL 313 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-~~~~~~~s~~~q~~~ 313 (464)
|+..+ .... .+.. + ..+.++ +|+|.+| .|+.+|.+++++ .+.+.... ....+..++++.+++
T Consensus 268 -~GrtG-~~~a-~~~~-g--------v~PDiv---~~gK~l~-gG~pi~av~~~~-~i~~~~~~~~~~T~~g~p~~~aaa 330 (457)
T PRK05639 268 -IGRTG-KWFA-SEWF-E--------VKPDLI---IFGKGVA-SGMGLSGVIGRK-ELMDLTSGSALLTPAANPVISAAA 330 (457)
T ss_pred -cCcCc-hHHH-HHhc-C--------CCCCEE---Eechhhc-CCCcceeEEehH-HHHhhcCCCcccCCCcCHHHHHHH
Confidence 43221 1111 1111 1 112333 4899998 899999999944 44442211 111122455555555
Q ss_pred HHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcC
Q 037587 314 SRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 314 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~g 389 (464)
.+.|+--+- ++.+++. ++.-++|.+.|++ +++......-|+++.+.+..............+...++ ++|
T Consensus 331 ~a~l~~l~~-~~l~~~~----~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~G 404 (457)
T PRK05639 331 EATLEIIEE-ENLLKNA----LKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAF-ELG 404 (457)
T ss_pred HHHHHHHHH-ccHHHHH----HHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHH-hCC
Confidence 554442110 1112222 2233333444433 34332223445777777742211111122234555555 679
Q ss_pred eEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 390 LNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 390 I~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
|++.+... ..+.+|+.... ++++++++++++|.+++++.
T Consensus 405 v~~~~~g~----~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 405 LILPSYGM----FGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred eEEeecCC----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 99976421 24679999877 79999999999999998765
No 290
>PRK07678 aminotransferase; Validated
Probab=99.66 E-value=6.3e-13 Score=134.91 Aligned_cols=362 Identities=11% Similarity=0.062 Sum_probs=193.4
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ...++... ..+....+|+.+.+..+
T Consensus 40 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-------------~~~~~~~~-~~~~~~~lae~l~~~~~-- 103 (451)
T PRK07678 40 WVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKT-------------LSYFPLTQ-SHEPAIKLAEKLNEWLG-- 103 (451)
T ss_pred EEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHh-------------cCcccccc-CCHHHHHHHHHHHHhCC--
Confidence 4444556778998755 2223 346666766664221 11111111 13344556666654322
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
..+.++++++++|++..+++.... +| .+|+...-+|++....+....|. .+..++.+
T Consensus 104 ---~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~ 180 (451)
T PRK07678 104 ---GEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP 180 (451)
T ss_pred ---CCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC
Confidence 235799999999999998886421 23 57888888888754332211111 11222211
Q ss_pred CCCCccc---------C---HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 165 SSNGFRI---------T---ISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 165 ~~~~~~~---------d---~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
+.+.. + ++.+++.++. ....++.+||+.-...-.|.+ .|.+.++++.++|+++|+++|.||++
T Consensus 181 --~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~ 256 (451)
T PRK07678 181 --DCYRMPGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVI 256 (451)
T ss_pred --ccccccccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 11111 1 1223444431 113466665554224445655 56778999999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--------ccc
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--------SSF 302 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--------~~~ 302 (464)
.++.-.+. .... +.. + ..+. +-+++|.+| .| +.+|.+++++ .+.+.+... ...
T Consensus 257 tGfGRtG~---~~~~-~~~-g--------v~PD---ivt~gK~lg-gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~h~~T 318 (451)
T PRK07678 257 CGFGRTGK---AFGF-MNY-G--------VKPD---IITMAKGIT-SAYLPLSATAVKK-EIYEAFKGKGEYEHFRHVNT 318 (451)
T ss_pred hcCCcCch---hHHH-Hhc-C--------CCCC---EEEeecccc-cCCcceeEEEEcH-HHHHHHhccCcccccccCCC
Confidence 87422221 1111 111 1 1122 338899998 77 7999999954 455544321 112
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC---ChhHHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN---TFEAEKE 379 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~---~~~~~~~ 379 (464)
+..++++.+++.+.|+--+- +...++.++.-+..++.|.+.++++++......-|+++-+.+....... +......
T Consensus 319 ~~gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~ 397 (451)
T PRK07678 319 FGGNPAACALALKNLEIMEN-ENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVAS 397 (451)
T ss_pred CCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHH
Confidence 23566666666665542110 1112222222122223333444444433222234567777774321110 1112234
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++..++ ++||++.+.....+.....+|++... ++++++++++++|.+++++.+
T Consensus 398 i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 398 VVAACK-EKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred HHHHHH-HCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 555554 67999976422111223579999876 699999999999999997653
No 291
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=2.1e-13 Score=132.81 Aligned_cols=210 Identities=23% Similarity=0.280 Sum_probs=149.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v 161 (464)
...|.++++.+- ..++.+.++++..||..++.+++++||.|+++...|++....+ +.. |+++..+
T Consensus 65 ~~~lE~~~a~LE----------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~-gi~~~~~ 133 (396)
T COG0626 65 RDALEEALAELE----------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKF-GVEVTFV 133 (396)
T ss_pred HHHHHHHHHHhh----------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhc-CeEEEEE
Confidence 356666666664 2567889999999999999999999999999999998866553 344 8888877
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.. +.+.+++++.+ +++++|++-.|.|||-.+ .++.+|+++|+++|+++|+|..|+...+-.+
T Consensus 134 d~~-------~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~P-- 196 (396)
T COG0626 134 DPG-------DDEALEAAIKE-----PNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQRP-- 196 (396)
T ss_pred CCC-------ChHHHHHHhcc-----cCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccCh--
Confidence 642 34566665542 379999999999999888 4688899999999999999999985433222
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHH--HHhcccC-CCChHHHHHHHHHc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAA--TKMSSFG-LVSSQTQYLLSRML 317 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~--~~~~~~~-~~s~~~q~~~~~~l 317 (464)
..+ +..|+++|.+|.++ -.-+=.|.++++++.+.+.+ ......+ .+++.....+..-+
T Consensus 197 -----L~~-------------GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGl 258 (396)
T COG0626 197 -----LEL-------------GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGL 258 (396)
T ss_pred -----hhc-------------CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhcc
Confidence 112 56789999999995 23355676776777776654 2222233 35566655555544
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+. +.-+.++..++...+.+.|+++
T Consensus 259 kT-------L~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 259 RT-------LALRMERHNENALKIAEFLADH 282 (396)
T ss_pred ch-------HHHHHHHHHHHHHHHHHHHhcC
Confidence 44 3444555666778888888876
No 292
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.65 E-value=2e-14 Score=141.90 Aligned_cols=282 Identities=16% Similarity=0.181 Sum_probs=174.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeCC-hHHHHHHHHHHhcC---CCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKF-DPNKLVLTAG-STAANETLMFCLAD---PGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G-~~~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
..+.|+.++++++ + ++++|++|+| +|++++.++..++. +||.|++ .|........++.. |+++..
T Consensus 46 ~~~~r~~l~~l~~--------~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~-g~~~~~ 115 (355)
T cd00611 46 VNEAESDLRELLN--------IPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRY-GGVVVI 115 (355)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhc-CCCcEE
Confidence 3566777777775 3 4678999988 99999999999987 4555444 22111122245555 888888
Q ss_pred EecCCCCCcccC-HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 161 IHCSSSNGFRIT-ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 161 v~~~~~~~~~~d-~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
++.+..+++. + ++..+..+ .+++++|.+++-.|.||..++ ++++.+|+++++|.+.+ ++..
T Consensus 116 ~~~~~~g~~~-~~~~~~~~~~------~~~~~lV~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs---~g~~ 177 (355)
T cd00611 116 VAAKEEGKYT-KIPDVETWDL------APDAAYVHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSN---ILSR 177 (355)
T ss_pred EecccccCCC-CCCCHhhcCC------CCCCCEEEEeCCcccccEEcc--------eecccCCCeEEEEcccc---ccCC
Confidence 8875432231 2 22222222 247899999999999999743 23445899999999997 4433
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-------------HhcccCCCC
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-------------KMSSFGLVS 306 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-------------~~~~~~~~s 306 (464)
+ .++.++ + +.+.|..|.+|.+| +|+++++++.+.+... ....+++++
T Consensus 178 --~-idv~~~-------------~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn 237 (355)
T cd00611 178 --P-IDVSKF-------------G--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPP 237 (355)
T ss_pred --C-CCHHHh-------------C--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCCh
Confidence 1 232222 3 35567899999777 7888885544432110 001133444
Q ss_pred hHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhC-CCe-e-ec--CCccEEEEEecCcccccCChhHHHH
Q 037587 307 SQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVA-GIR-C-LK--SNAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 307 ~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~--~~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
.....++.++++- +.+ -++...++.++..+++.+.|+++ |+. . .. ...+..+.+.++.. ....+
T Consensus 238 ~~~i~~L~aal~~---l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~------~l~~~ 308 (355)
T cd00611 238 TFAIYMMGLVLKW---LKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE------ELEKE 308 (355)
T ss_pred HHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh------hhhHH
Confidence 4444555555442 222 26677778888889999999988 752 1 11 12333455555532 11112
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+... +.+.|+.+.++.. ..+.+|+|+.. .++++++.++++|+++.
T Consensus 309 ~~~~-~~r~G~~~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 309 FLKE-AEAAGMIGLKGHR----SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred HHHH-HHHCCCcccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 3233 3467998666653 24689999987 79999999999998853
No 293
>PLN02271 serine hydroxymethyltransferase
Probab=99.64 E-value=2.3e-13 Score=136.56 Aligned_cols=295 Identities=14% Similarity=0.095 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC----CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---------ccCC
Q 037587 88 DAKKELVKLMARIRGNKVKFDP----NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---------KWRP 154 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~----~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---------~~~~ 154 (464)
++.....++..+.++ ++. .||-.- +++.|+..++.+|++|||+|+..+..|+++.... ...
T Consensus 194 ~iE~la~era~~lF~----~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s- 267 (586)
T PLN02271 194 QIERLCCERALAAFG----LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA- 267 (586)
T ss_pred HHHHHHHHHHHHHhC----Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc-
Confidence 443333444444444 444 566665 5566777888899999999999988887765432 112
Q ss_pred CcE--EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 155 GVE--IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 155 g~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
|.. ++++++++ ....+|.+++++.... .++|+|++..-.+| ..++ ++++.++|+++|+++++|.++.
T Consensus 268 G~~~~~vpY~~d~-~~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~ 336 (586)
T PLN02271 268 SIFFESLPYKVNP-QTGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHI 336 (586)
T ss_pred cceEEEEEccccc-ccCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECccc
Confidence 544 44444543 3456899999985543 38998888666777 4454 5566777789999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCH-------------------HHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE-------------------RVV 293 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~-------------------~~~ 293 (464)
....... .+++.. ....++..|.+|++ .|-|-|.|+.+++ .+.
T Consensus 337 aGLIa~g--~~~sP~--------------~~aDvvt~TTHKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~ 398 (586)
T PLN02271 337 SGLVAAK--ECVNPF--------------DYCDIVTSTTHKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFE 398 (586)
T ss_pred ccccccC--cCCCCC--------------cCCcEEEeCCcccC--CCCCceEEEecccccccccCCccccccccccHHHH
Confidence 5444332 111111 13457889999998 5666688887432 132
Q ss_pred HHHHHhcccC-CCChH--HHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccEEEEEecC
Q 037587 294 SAATKMSSFG-LVSSQ--TQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGLFCWVDMR 366 (464)
Q Consensus 294 ~~~~~~~~~~-~~s~~--~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~f~~~~l~ 366 (464)
+.+.....+. ..++. ..++++.++. .++| ++..+++.++.+.|.+.|.+.|+++... ..+..+++++.
T Consensus 399 ~kI~~aVfPglqgGphn~~IAalAvalkea~~~ef-----k~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~ 473 (586)
T PLN02271 399 EKINFAVFPSLQGGPHNNHIAALAIALKQVATPEY-----KAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLT 473 (586)
T ss_pred HHhhcccCCccccChhHHHHHHHHHHHHHHhChHH-----HHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCc
Confidence 3332222112 11211 1222223333 3444 3444555667888999999999988753 33567888986
Q ss_pred ccc-ccCChhHHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHH
Q 037587 367 HLL-VSNTFEAEKELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFAN-----ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 367 ~~~-~~~~~~~~~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~ 430 (464)
... .+ ..+.+.|++.||.+. |+.. .+..++.+||+... ..+++++++.+-|.++++
T Consensus 474 ~~g~~G-------~~ae~~Le~~~I~~Nkn~iP~d~-~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 474 TLGLTG-------KNYEKVCEMCHITLNKTAIFGDN-GTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred ccCCCH-------HHHHHHHHHcCeEeccccCCCCC-CCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 431 11 346777888999985 3331 11235569998744 357889998888888876
No 294
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=1.8e-13 Score=137.64 Aligned_cols=155 Identities=17% Similarity=0.269 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v~ 162 (464)
..+++.+|++.+ . ...|++++|. .++.+++.+++++||+|+++...|.+... .+... |++++.++
T Consensus 72 ~~le~~la~l~g--------~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~-Gi~v~~vd 140 (437)
T PRK05613 72 EALENRIASLEG--------G-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRL-GIEVTFVE 140 (437)
T ss_pred HHHHHHHHHHhC--------C-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhc-CeEEEEEC
Confidence 566677777664 2 3445555555 78888888889999999999999987632 23445 99999887
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
++ .|++.+++++++ ++++|++.+|.||+|.+.+ +++|.++|+++|+++|+|.+++....
T Consensus 141 -~~-----~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~------ 199 (437)
T PRK05613 141 -NP-----DDPESWQAAVQP------NTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL------ 199 (437)
T ss_pred -CC-----CCHHHHHHhCCc------cCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc------
Confidence 22 268889888765 7888998899999998865 77788888899999999999863211
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS 287 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~ 287 (464)
.....+ +..+++.|++|.++-.|--+|-++.
T Consensus 200 -~~p~~~-------------GaDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 200 -VRPLEL-------------GADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred -cChHHh-------------CCCEEEeeccceecCCCcceeEEEE
Confidence 111112 4567899999999755544444433
No 295
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.64 E-value=1.1e-13 Score=137.21 Aligned_cols=284 Identities=18% Similarity=0.268 Sum_probs=176.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
..++.++++++++ ..+++.+++++.||.+++.++ +++||+|+++..+|......+... |++++.++++
T Consensus 27 ~~~fE~~~a~~~g----------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~-G~~pv~~Di~ 95 (363)
T PF01041_consen 27 VEEFEKEFAEYFG----------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWA-GAEPVFVDID 95 (363)
T ss_dssp HHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHT-T-EEEEE-BE
T ss_pred HHHHHHHHHHHhC----------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHh-ccEEEEEecc
Confidence 4788888888875 567899999999999999997 468999999999999888888877 9999999998
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCc
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSF 243 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~ 243 (464)
+ +.+.+|++.+++.+.+ ++++|++++. -|... ++.+|.++|+++|++||+|.+++... +.+.
T Consensus 96 ~-~~~~id~~~~~~~i~~------~t~ai~~~h~---~G~~~---d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~---- 158 (363)
T PF01041_consen 96 P-ETLNIDPEALEKAITP------KTKAILVVHL---FGNPA---DMDAIRAIARKHGIPLIEDAAQAFGARYKGR---- 158 (363)
T ss_dssp T-TTSSB-HHHHHHHHHT------TEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-TTTTT-EETTE----
T ss_pred C-CcCCcCHHHHHHHhcc------CccEEEEecC---CCCcc---cHHHHHHHHHHcCCcEEEccccccCceeCCE----
Confidence 5 4789999999999986 8899998854 56553 68889999999999999999998422 1111
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCC--CcCCCCCccEEEEEEecCHHHHHHHHHhcccC------------------
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSL--SKDFSMPGFRVGMIYSNNERVVSAATKMSSFG------------------ 303 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~--SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~------------------ 303 (464)
.+.. -..+.+.|| +|.+. .| --|.++++++.+.+.++.+..++
T Consensus 159 -~~G~--------------~gd~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n 221 (363)
T PF01041_consen 159 -PVGS--------------FGDIAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYN 221 (363)
T ss_dssp -ETTS--------------SSSEEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B
T ss_pred -eccC--------------CCCceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcc
Confidence 1111 123456676 68884 33 35999998888877776654322
Q ss_pred -CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCc---cE-EEEEecCcccccCChh
Q 037587 304 -LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK--SNA---GL-FCWVDMRHLLVSNTFE 375 (464)
Q Consensus 304 -~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~~~---g~-f~~~~l~~~~~~~~~~ 375 (464)
.++.+..+.+..-|+. +++..+.-++....+.+.|... ++...+ +.. ++ .+.+.++.... .
T Consensus 222 ~rm~~~~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~----~ 290 (363)
T PF01041_consen 222 FRMSELQAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL----A 290 (363)
T ss_dssp -B-BHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----S
T ss_pred cccHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----c
Confidence 1223333333333332 2333333344556667777776 443322 221 22 22334442211 0
Q ss_pred HHHHHHHHHHHhcCeEEeCCCC--CCC-----C--------C-------CCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSS--CHC-----N--------E-------PGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~--f~~-----~--------~-------~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
.-.++...| ++.||...+... .+. . - ...+-+.+.. +++++++.+++.|+
T Consensus 291 ~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 291 DRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp THHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 122455555 567999987552 110 0 0 1235666554 68888888888764
No 296
>PRK07482 hypothetical protein; Provisional
Probab=99.63 E-value=1.4e-12 Score=132.70 Aligned_cols=357 Identities=12% Similarity=0.047 Sum_probs=195.6
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCC-CCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDY-HGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+... ....+.+..+|+.+.+...
T Consensus 43 ~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~-------------~~~~~~~~~~~~~~~~~~lAe~L~~~~p- 108 (461)
T PRK07482 43 RITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAK-------------ELAYYHTYVGHGTEASITLSKRIIDRAP- 108 (461)
T ss_pred EEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHH-------------hcCccccccccCCHHHHHHHHHHHHhCC-
Confidence 4445566788998865 3333 34667777766532 11111111 1124566667777654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA------D-P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
-..+.++++++++|++..+++... . + ..+|+...-+|++....+....|. .+..++.
T Consensus 109 ---~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~ 185 (461)
T PRK07482 109 ---AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEA 185 (461)
T ss_pred ---CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCC
Confidence 134689999999999999998752 1 2 257888888888753221111110 1111211
Q ss_pred CC--CC---C-----c-ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 164 SS--SN---G-----F-RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 164 ~~--~~---~-----~-~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
+. .. + + .-+++.+++.+.+ ....++.+|++.-...-.|.. .+.+-+++|.++|++||+++|.||+.
T Consensus 186 p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~ 263 (461)
T PRK07482 186 PHYYRRADAGMSEEQFSAYCADELEELILA--EGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVV 263 (461)
T ss_pred CccccccccCCCHHHHHHHHHHHHHHHHHh--cCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccc
Confidence 10 00 0 0 0024555665532 112356665554224445666 56778999999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHH---------hcc
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATK---------MSS 301 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~---------~~~ 301 (464)
.++.-.+. .+ . .+.. + ..+.++ +++|.+| .|+ .+|.+++. +.+.+.+.. ...
T Consensus 264 tGfGRtG~--~~-a-~~~~-g--------v~PDiv---~~gKgl~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 264 TGFGRLGS--MF-G-SDHY-G--------IEPDLI---TVAKGLT-SAYAPLSGSIVG-EKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred cCCCcCcc--hh-h-HHhc-C--------CCCCEE---EEccccc-cCccccceeeec-HHHHHHHhcccccCCccccCC
Confidence 87422222 11 1 1111 0 123333 6799998 785 89988884 445444431 111
Q ss_pred cCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCC-hh--
Q 037587 302 FGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNT-FE-- 375 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~-~~-- 375 (464)
.+..++++.+++.+.|+ +.+. .+..+++-+.+. +.|.+.++++++......-|+++.+++........ ..
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~~~l-~~~~~~~g~~l~---~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~ 401 (461)
T PRK07482 326 TYSGHPICAAAALANLDILERENL-VGNAAEVGAYFR---ARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPA 401 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHH---HHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChh
Confidence 12356677666666554 2222 222222222222 22333333444322222446788888853211110 01
Q ss_pred --HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 376 --AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 376 --~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
....++..++ ++||+++++. ..+.+|+..+. ++++++++++++|.+++++.
T Consensus 402 ~~~~~~i~~~~~-~~Gvl~~~~~-----~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 402 LKIGPQVSAAAL-ERGVIARAMP-----HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred hHHHHHHHHHHH-HCCcEEecCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1224555555 6799987532 12468988665 79999999999999998764
No 297
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.63 E-value=1.5e-13 Score=137.76 Aligned_cols=311 Identities=12% Similarity=0.073 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC-C-CcEEE--eCChHHHHHHHHHHhcC--------CC-----CeEEEcCCCCCChhhh
Q 037587 87 PDAKKELVKLMARIRGNKVKFD-P-NKLVL--TAGSTAANETLMFCLAD--------PG-----DAFLLPTPYYPGFDRD 149 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~-~-~~i~i--t~G~~~al~~~~~~l~~--------~g-----d~Vlv~~p~y~~~~~~ 149 (464)
.++.+.+.+++.+.+| ++ + +++.. |+|+||++.+++.+... .| -.|++..-.|..+...
T Consensus 79 ~~le~~~~~~la~llg----~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka 154 (431)
T TIGR01788 79 AEIENRCVNMLADLWH----APAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKF 154 (431)
T ss_pred HHHHHHHHHHHHHHhC----CCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHH
Confidence 3555555566655554 44 2 45544 89999999998865421 12 3688888889888888
Q ss_pred cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC------Ce
Q 037587 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK------RI 223 (464)
Q Consensus 150 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~------~~ 223 (464)
++.. |+++..+|+++ +++.+|+++|++++++ ++.+|+++..+|.||.+-| +++|+++|+++ ++
T Consensus 155 ~~~l-g~~v~~i~~d~-~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~~ 223 (431)
T TIGR01788 155 ARYF-DVELREVPMDP-GRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWDI 223 (431)
T ss_pred HHHc-CceeEEEecCC-CceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCCc
Confidence 8777 99999999875 4567999999999976 7788899999999999965 66677888888 89
Q ss_pred EEEEecccccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHH-HHHHHHHh
Q 037587 224 HIVSDEIYSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNER-VVSAATKM 299 (464)
Q Consensus 224 ~lI~Deay~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~-~~~~~~~~ 299 (464)
++.+|.+|+.+.. .-.. ....+ . ......+.-|.+|.+ |..| +|.++.+++. +...+...
T Consensus 224 ~~HvDaaq~g~~~p~~~~~-~~~~~----~---------~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~ 287 (431)
T TIGR01788 224 PIHVDAASGGFIAPFVYPD-LEWDF----R---------LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFH 287 (431)
T ss_pred eEEEecccHHHHHHHhCCC-chhhc----C---------CCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheec
Confidence 9999999986431 1110 00111 0 113344567999986 5445 8988876543 22222111
Q ss_pred cccC---------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--CccEEEEEecCc
Q 037587 300 SSFG---------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS--NAGLFCWVDMRH 367 (464)
Q Consensus 300 ~~~~---------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~f~~~~l~~ 367 (464)
..+. ..+...-.++..++.-..+-..-+++..+...+..+++.+.|++. ++++..+ ..+ .+.+++..
T Consensus 288 ~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~-iV~Fr~~~ 366 (431)
T TIGR01788 288 VNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIP-LVAFKLKD 366 (431)
T ss_pred ccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCce-EEEEEeCC
Confidence 0010 011111111222221001112334555666667778888889887 4777643 454 45455542
Q ss_pred ccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 368 LLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 368 ~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
... .. ....++.+.| .++|+.+....... ..+.-++|+++.. .+++.++.+++.|+.++...
T Consensus 367 ~~~-~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 367 DAD-PG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CCC-CC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 110 01 1122455555 56798753222111 1123468999864 67899999999999988764
No 298
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.63 E-value=9e-13 Score=133.82 Aligned_cols=339 Identities=14% Similarity=0.109 Sum_probs=188.4
Q ss_pred CCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+- +.+ ..|.+.+++.++.+ ....|.. ..++...+|+.+.+...
T Consensus 92 ~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~-------------~~~~~~~---~~~~~~~lAe~l~~~~p-- 153 (474)
T PLN02482 92 YAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMK-------------KGTSFGA---PCLLENVLAEMVIDAVP-- 153 (474)
T ss_pred EEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHh-------------hCCCCCC---CCHHHHHHHHHHHHhCC--
Confidence 44445567789987653 223 34677777766532 1222221 23555666777654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccC-------------CCc------EEEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWR-------------PGV------EIVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-------------~g~------~~~~v~~ 163 (464)
..+.+.++++++|++..+++... ....+|+...-+|++....+... .|. .++.++
T Consensus 154 ---~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 229 (474)
T PLN02482 154 ---SVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP- 229 (474)
T ss_pred ---CCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec-
Confidence 24789999999999999988642 23367888888888864321100 011 011111
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
| -|++.+++.+++ ...++.+|++ .| ..-.|.+.+ .+.++++.++|+++|+++|+||++.++ ..+.
T Consensus 230 -----~-nd~~~l~~~l~~---~~~~iAavI~-Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~-- 296 (474)
T PLN02482 230 -----Y-NDLEAVKKLFEA---NKGEIAAVIL-EPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY-- 296 (474)
T ss_pred -----C-CChHHHHHHHHh---CCCceEEEEE-CCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc--
Confidence 1 167888887754 2235655554 45 455676655 678999999999999999999999764 2222
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-----cCCCChHHHHHHHHH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-----FGLVSSQTQYLLSRM 316 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~ 316 (464)
....+... ..+. +.+|+|.+| .|+.+|.+++ ++.+.+.+..... .+..++++.+++.+.
T Consensus 297 --~ga~~~~g---------v~PD---i~t~gK~lg-gG~Pigav~g-~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~ 360 (474)
T PLN02482 297 --GGAQEYFG---------ITPD---LTTLGKVIG-GGLPVGAYGG-RREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHT 360 (474)
T ss_pred --chHhHHhC---------CCCC---EEEecchhh-CCCceEEEEE-cHHHHHhhccCCCcccccCcchhHHHHHHHHHH
Confidence 11111111 1122 348899998 8999999988 4555555432111 111355555555444
Q ss_pred cC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcc-c------ccCChhHHHHHHHHHH
Q 037587 317 LS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHL-L------VSNTFEAEKELWKKII 385 (464)
Q Consensus 317 l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~-~------~~~~~~~~~~l~~~ll 385 (464)
|+ +++. .++..+.-+..++.|.+...+.|+++. ...+|++ .+.+... . ...+......++..++
T Consensus 361 L~~l~~~~~----~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~ 435 (474)
T PLN02482 361 LKRLQQPGT----YEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRGML 435 (474)
T ss_pred HHHHhccCH----HHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHHHH
Confidence 33 3222 222222222222333333344455544 2334443 2333211 0 0111122234566665
Q ss_pred HhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 386 FEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 386 ~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++||++.|... . .++ +++. +++++++++++++.+++++
T Consensus 436 -~~Gv~~~~~~~-~---~~~--psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 436 -EEGVYLAPSQF-E---AGF--TSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred -HCCeEEeccCC-C---CCc--CCCC-CCHHHHHHHHHHHHHHHHh
Confidence 67999987422 1 111 3444 5899999999999998864
No 299
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.62 E-value=1.2e-13 Score=135.12 Aligned_cols=293 Identities=18% Similarity=0.194 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCC----cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC---------
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPN----KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR--------- 153 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--------- 153 (464)
+++.+...++..+.++ ++++ +|-. .+++.|+..++.+|++|||+|+..++..+++...-...
T Consensus 65 d~iE~la~~ra~~lF~----~~~~~w~anvqp-~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 65 DEIEELAIERAKELFG----AEPKEWYANVQP-HSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp HHHHHHHHHHHHHHHT-----STTTEEEE----SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred hHHHHHHHHHHHHHhC----CCcccceEEeec-CCchHHHHHHHHHHHhhcCcEEecChhhccccccccccccccccccc
Confidence 4444445555555665 5543 3444 45566888999999999999999998887664321110
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
...+++.++++++ ...+|.+++++.+++. +|++|++.-.+.|- . -+.+++.++|.+.|.+++.|-++..
T Consensus 140 ~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~-----kPklIi~G~S~y~~--~---~d~~~~reIad~vga~l~~D~sH~~ 208 (399)
T PF00464_consen 140 LYFESVPYPVDPD-TGLIDYDELEKLAKEH-----KPKLIICGASSYPR--P---IDFKRFREIADEVGAYLMADISHIA 208 (399)
T ss_dssp HHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTH
T ss_pred ceEEEEeeeeecC-CCeECHHHHHHHHhhc-----CCCEEEECchhccC--c---cCHHHHHHHHHhcCcEEEecccccc
Confidence 0357888888864 5689999999999886 89987775433321 2 3567777778889999999999964
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec-------------CHHHHHHHHHhc
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN-------------NERVVSAATKMS 300 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~-------------~~~~~~~~~~~~ 300 (464)
....+. .+++.... ..++.+|.+|+| +|-|-|.|.++ ++.+.+.+.+..
T Consensus 209 GLIa~g--~~~~P~~~--------------ADvvt~sThKtl--~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~av 270 (399)
T PF00464_consen 209 GLIAGG--LFPNPFPY--------------ADVVTGSTHKTL--RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAV 270 (399)
T ss_dssp HHHHTT--SS--GCCT--------------SSEEEEESSGGG---SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHH
T ss_pred cceehh--eecCcccc--------------ceEEEeeccccc--cccCceEEEEcCCccccCCcccccHHHHHHHhcccc
Confidence 433333 23332222 337789999998 78899999996 366777666554
Q ss_pred ccCCC-ChHHH--HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcc-cccCChh
Q 037587 301 SFGLV-SSQTQ--YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHL-LVSNTFE 375 (464)
Q Consensus 301 ~~~~~-s~~~q--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~-~~~~~~~ 375 (464)
.+... ++... ++.+.++.. ......++..+++-++.+.|.+.|.+.|+++.. ...+..+|+++... .+.
T Consensus 271 fP~~qg~~h~~~iaalAval~e--a~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g---- 344 (399)
T PF00464_consen 271 FPGLQGGPHMHRIAALAVALKE--ALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDG---- 344 (399)
T ss_dssp TTTT-SS--HHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-H----
T ss_pred CCCcccCcchhHHHHHHHHHhc--ccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccch----
Confidence 33322 22211 122222221 111223445556667888899999999999874 23356788998642 111
Q ss_pred HHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeecC-----CHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFANI-----TEETLQVALQ 423 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~~-----~~e~l~~~l~ 423 (464)
..+...|++.||.+. |+.. .+..+..+||+...+ .+++++++.+
T Consensus 345 ---~~a~~~Le~~gI~vnkn~iP~d~-~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 345 ---KEAEKALEEAGIIVNKNTIPGDR-SPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp ---HHHHHHHHHTTEE-EEE--TTTS-TTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred ---HHHHHHHHhcCeeecccccCCCC-CCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 235667789999985 4431 111245799998542 4555555443
No 300
>PRK15029 arginine decarboxylase; Provisional
Probab=99.62 E-value=7.2e-14 Score=146.78 Aligned_cols=177 Identities=14% Similarity=0.128 Sum_probs=125.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+..+..|+.++ .....+++||+|.++..++.+++.+||+||++..||.+..+.+... |++++.++...
T Consensus 207 I~eAq~~aA~~fg---------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~-ga~Pvyl~P~~ 276 (755)
T PRK15029 207 FGESEKYAARVFG---------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILT-GAKPVYMVPSR 276 (755)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 4566667777775 4567899999999999999999999999999999999998888876 99999887442
Q ss_pred CCCcc----cC-----HHHHHHHHHHHh----hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 166 SNGFR----IT-----ISALENAYQQAQ----TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 166 ~~~~~----~d-----~~~l~~~i~~~~----~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
+.++ ++ ++.+++++++.. ..+++++++++++| +..|.++ ++++|++.|+++++.+++||||+
T Consensus 277 -~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~---di~~I~~~~h~~~~~llvDEAhG 351 (755)
T PRK15029 277 -NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceee---CHHHHHHHHHhcCCeEEEECccc
Confidence 2222 23 888999886532 12345669999999 8899996 57778999999999999999997
Q ss_pred ccccCCCCCCccchhhhh-hccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE
Q 037587 233 GTVFDSPSSSFISIMEAV-MDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY 286 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~ 286 (464)
.. |.-.+ .++....+. ... ......++++.|.+|++ +++..|.++
T Consensus 352 ah-~~F~~-~~p~~sa~~~~~~-----~~~Gad~~vvqStHKtL--~alTQaS~L 397 (755)
T PRK15029 352 GY-ARFNP-IYADHYAMRGEPG-----DHNGPTVFATHSTHKLL--NALSQASYI 397 (755)
T ss_pred cc-cccCc-ccccccccccccc-----ccCCCceEEEEchhhcc--cchhhhhhh
Confidence 64 22110 122111110 000 00112348899999997 666666543
No 301
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=3.4e-12 Score=129.49 Aligned_cols=348 Identities=13% Similarity=0.129 Sum_probs=193.1
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ......+ .-..+.+..+|+.+.+..+
T Consensus 47 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~----------~~~~~~~---~~~~~~~~~lAe~L~~~~p-- 111 (453)
T PRK06943 47 WLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDT----------LEHAMLA---GCTHEPAIELAERLAALTG-- 111 (453)
T ss_pred EEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHh----------cCCcccc---ccCCHHHHHHHHHHHHhCC--
Confidence 4444566788999765 3333 346666766664221 1111111 1123455566666654322
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-------CC-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-------DP-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-------~~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
..-+.+++++++++++..+++... .+ ..+|+...-+|++....+....|. .+..++..
T Consensus 112 --~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p 189 (453)
T PRK06943 112 --GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASP 189 (453)
T ss_pred --CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCC
Confidence 123589999999999999988752 12 367999998888754221111111 11222221
Q ss_pred CCCC--cc--------cCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 SSNG--FR--------ITISALENAYQQAQTLNLKVKGVLITN-PSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~~~~--~~--------~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
...+ +. -+++.+++.++. .+.++.+|++.- ...-.|. ..|.+.++++.++|++||+++|.||++.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T 266 (453)
T PRK06943 190 DARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV 266 (453)
T ss_pred CccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh
Confidence 1000 00 123555655542 234677666653 2455666 4577889999999999999999999998
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH--------hcccC
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK--------MSSFG 303 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~--------~~~~~ 303 (464)
++ +..+ .+... +.. + ..+.++ +++|.+| .| +.+|.+++++ .+.+.+.. ....+
T Consensus 267 G~--GRtG-~~fa~-~~~-g--------v~PDiv---t~gKgl~-gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~~~T~ 328 (453)
T PRK06943 267 GC--GRTG-TFFAC-EQA-G--------VWPDFL---CLSKGIS-GGYLPLSLVLSRD-AIFAAFYDDDVTRGFLHSHSY 328 (453)
T ss_pred CC--CCCc-chhHH-HhC-C--------CCCCeE---eeehhhc-cCcccceEEEEcH-HHHHhhcccCccCCccCCCCC
Confidence 74 3221 11111 111 0 123333 6799998 89 5999999954 45544431 11122
Q ss_pred CCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHh---C-CCeeecCCccEEEEEecCcccccCChhH
Q 037587 304 LVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKV---A-GIRCLKSNAGLFCWVDMRHLLVSNTFEA 376 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~ 376 (464)
..++++.+++.+.|+ +.++ .+..+ ++-+++.+.|++ . ++.-.. .-|+++-+++..... .....
T Consensus 329 ~gnpl~~aaa~a~L~~i~~~~l-~~~~~-------~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~gvel~~~~~-~~~~~ 398 (453)
T PRK06943 329 TGNPLACRAALATLDLFAEDDV-LARNA-------RKSARLRAALAPLAAHPQVRHLR-QRGTIFAFDVALDGD-AARTF 398 (453)
T ss_pred CCCHHHHHHHHHHHHHHHhcCH-HHHHH-------HHHHHHHHHHHHHhcCCCEEeEe-ccccEEEEEEccCCC-cchHH
Confidence 346666666665554 3222 12222 223333333333 2 232222 345677777752211 11111
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 377 EKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
...+...++ ++||++.+.. +.+|++... ++++++++++++|.+++++.
T Consensus 399 ~~~i~~~~~-~~Gll~~~~g-------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 399 SRRFFEAAL-ERELLLRPIG-------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHH-HCCcEEEecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 234555554 6799997641 358998655 69999999999999999764
No 302
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.61 E-value=3.5e-15 Score=146.34 Aligned_cols=177 Identities=20% Similarity=0.289 Sum_probs=122.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+..+.+|+.++ .....+++||+|.++..++.+++.+||+||++..||.+...++... |+++++++..
T Consensus 68 I~eAe~~aA~~fG---------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~-ga~Pvyi~p~- 136 (417)
T PF01276_consen 68 IKEAEELAARAFG---------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILS-GAIPVYIPPE- 136 (417)
T ss_dssp HHHHHHHHHHHHT---------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHH-TEEEEEEEEE-
T ss_pred HHHHHHHHHHhcC---------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHc-CCeEEEecCC-
Confidence 4677777788776 3556889999999999999999999999999999999888888776 9999988865
Q ss_pred CCCc----ccCH-----HHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-
Q 037587 166 SNGF----RITI-----SALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV- 235 (464)
Q Consensus 166 ~~~~----~~d~-----~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~- 235 (464)
.+.+ .+++ +.+++++++.... ..++++++++| +..|.++ ++++|+++|.++++.|++||||+...
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~-k~~~~vvlt~P-TY~Gv~~---di~~I~~~~h~~~~~llvDEAhGah~~ 211 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDA-KAPRLVVLTSP-TYYGVCY---DIKEIAEICHKHGIPLLVDEAHGAHFG 211 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTC-HCESEEEEESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-TTGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccc-cCceEEEEeCC-CCCeEEE---CHHHHHHHhcccCCEEEEEcccccccc
Confidence 3333 3455 8888888763211 12455999999 8899996 58889999999999999999997641
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecC
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNN 289 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~ 289 (464)
|. + -+.+...+-.+ ......++++.|.+|.+ +++.- +++....
T Consensus 212 F~-~--lp~~a~~~gad------~~~~~~~~vvqS~HKtL--~altQts~lh~~~ 255 (417)
T PF01276_consen 212 FH-P--LPRSALALGAD------RPNDPGIIVVQSTHKTL--PALTQTSMLHVKG 255 (417)
T ss_dssp CS-G--GGTTCSSTTSS-------CTSBEEEEEEEHHHHS--SS-TT-EEEEEET
T ss_pred CC-C--CccchhhccCc------cccccceeeeechhhcc--cccccceEEEecC
Confidence 22 1 11122222111 11346789999999997 55554 4554433
No 303
>PLN03032 serine decarboxylase; Provisional
Probab=99.61 E-value=4e-13 Score=131.95 Aligned_cols=286 Identities=13% Similarity=0.070 Sum_probs=181.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKL--VLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i--~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v 161 (464)
..++.+.+.+++.+.++ ++++++ ++|+|+||++..++.+.. .++..|+++.-.|......++.+ |.++..+
T Consensus 64 a~~~e~~v~~~ia~llg----~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l-g~~~~~V 138 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE----LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMEAVKV 138 (374)
T ss_pred HHHHHHHHHHHHHHHhC----CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc-CCCCeEe
Confidence 35666666666665555 567776 999999999998887653 24568888888888888888777 8888888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC-----eEEEEecccccccc
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR-----IHIVSDEIYSGTVF 236 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~-----~~lI~Deay~~~~~ 236 (464)
|+++ ++.+|+++|++.+++. ..++.+|+++..+|+||.+- .+++|.++|+++| +++.+|.+|+....
T Consensus 139 ~~d~--~g~id~~~L~~~i~~~---~~~~~lvv~tagtt~tG~id---pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~ 210 (374)
T PLN03032 139 PTLP--SGEIDYDDLERALAKN---RDKPAILNVNIGTTVKGAVD---DLDRILRILKELGYTEDRFYIHCDGALFGLMM 210 (374)
T ss_pred eeCC--CCcCcHHHHHHHHHHc---CCCCEEEEEEecCcCCccCC---CHHHHHHHHHHhCCCCCCeeEEEEccchhhhh
Confidence 8874 4579999999999752 12466777888899999994 5667788888885 58999999975422
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC-------CCCh--
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG-------LVSS-- 307 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~-------~~s~-- 307 (464)
.-. ...+...+ ......+.-|.+|.+| ....+|.++.+++.+. .+.....|. ..+.
T Consensus 211 p~~--~~~~~~~~-----------~~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~-~~~~~~~Yl~~~d~ti~gSR~g 275 (374)
T PLN03032 211 PFV--SRAPEVTF-----------RKPIGSVSVSGHKFLG-CPMPCGVALTRKKHVK-ALSQNVEYLNSRDATIMGSRNG 275 (374)
T ss_pred hcc--CCCcccCC-----------CcCCcEEEECcccccC-CCcCeEEEEEEchhhH-hhccCCcccCCCCCcccCCCch
Confidence 100 00000011 1123345679999887 4456899998665432 222211211 1111
Q ss_pred ---HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcccccCChhHHHHHHHH
Q 037587 308 ---QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 308 ---~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
+...+....+. .+-+.+..+..-+..+++.+.|.+.++.+. .|... .+.++-+.. ..
T Consensus 276 ~~~l~~w~~l~~~G-----~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~-~V~f~~~~~-------------~~ 336 (374)
T PLN03032 276 HAPLYLWYTLRRKG-----YRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSS-TVVFERPMD-------------EA 336 (374)
T ss_pred HHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCce-EEEEcCCCc-------------Hh
Confidence 12222222222 233455566666777888999988887754 45543 444444410 11
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
+. .|..+.+- .+++||++.. ++++.++++++.|++
T Consensus 337 ~~--~~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 337 FI--KKWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred Hh--heeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 22 35555421 3479999976 677888888887764
No 304
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=1.7e-12 Score=130.76 Aligned_cols=348 Identities=10% Similarity=0.063 Sum_probs=191.7
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.+..+ ....+. -..+.+..+|+.+.+..+
T Consensus 46 ~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~-------------~~~~~~---~~~~~~~~la~~L~~~~~-- 107 (433)
T PRK00615 46 IFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE-------------RGTSYG---LTSEQEILFAEELFSYLG-- 107 (433)
T ss_pred EEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHH-------------hCCCCC---CCCHHHHHHHHHHHHhCC--
Confidence 4445556778999765 3333 35777777766532 111221 113344555666554321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-CC-CeEEEcCCCCCChhhh---cccCCCcEE----EEEecCC--CC----Cc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-PG-DAFLLPTPYYPGFDRD---LKWRPGVEI----VPIHCSS--SN----GF 169 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~---~~~~~g~~~----~~v~~~~--~~----~~ 169 (464)
...+.+.++++++|++..+++.... .| .+|+...-+|++.... .....+... ......+ .. .+
T Consensus 108 --~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (433)
T PRK00615 108 --LEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY 185 (433)
T ss_pred --CCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC
Confidence 2236899999999999999886431 23 5788888888875421 101101000 0000000 00 01
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~ 247 (464)
-|++.+++.+.+. +.++.+|+ ..| ..-.|... +.+.+++|.++|++||+++|+||++.++ ..+. . ...
T Consensus 186 -~d~~~l~~~l~~~---~~~~aavI-~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~--~--ga~ 255 (433)
T PRK00615 186 -NDFQIFQTVMNSL---GHRVAGVI-FEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ--G--GAA 255 (433)
T ss_pred -CCHHHHHHHHHhc---CCceEEEE-ECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH--h--HHH
Confidence 1678888877542 23555554 445 44457655 5677999999999999999999999764 1221 1 111
Q ss_pred hhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-----cCCCChHHHHHHHHHcC---C
Q 037587 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-----FGLVSSQTQYLLSRMLS---D 319 (464)
Q Consensus 248 ~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l~---~ 319 (464)
+... ..+.+ .+|+|.+| .|+.+|+++++ +.+.+.+..... .+..++++.+++.+.|+ +
T Consensus 256 ~~~g---------v~PDi---~~~gK~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~ 321 (433)
T PRK00615 256 AIYH---------VKPDI---TVYGKILG-GGLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE 321 (433)
T ss_pred HhcC---------CCCCe---EEEccccc-CCcceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc
Confidence 1110 11222 25899998 78999999994 445554432111 11235566555555543 2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-------CChhHHHHHHHHHHHhcCeEE
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-------NTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-------~~~~~~~~l~~~ll~~~gI~v 392 (464)
.+. .+.++++-+ ..++.|.+.+.+.|+++.....|.++.+.+...... .+......+...++ ++||++
T Consensus 322 ~~~-~~~~~~~g~---~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~ 396 (433)
T PRK00615 322 QGF-YTQLSTLEQ---NFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYL 396 (433)
T ss_pred ccH-HHHHHHHHH---HHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeee
Confidence 222 222222222 223334555555565443323566777777532110 01122335666665 679999
Q ss_pred eCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 393 SPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
.|.... ..+ ++.. .++++++++++++.+++++.
T Consensus 397 ~~~~~~----~~~--ls~~-ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 397 SPSPFE----ASF--LSSA-HSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cCcccc----ccc--eecC-CCHHHHHHHHHHHHHHHHHH
Confidence 875421 112 3444 58999999999999998864
No 305
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.61 E-value=7.4e-13 Score=130.94 Aligned_cols=205 Identities=14% Similarity=0.178 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh----hhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD----RDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~~g~~~~~v~ 162 (464)
.+|.+.++++.+ .+..+++++++.||.+++.+++++||+|+++.+.|+... ..+... |++++.++
T Consensus 67 ~~lE~~la~leg----------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~-Gi~v~fvd 135 (384)
T PRK06434 67 QAFEEKYAVLEN----------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTL-GIHVDYID 135 (384)
T ss_pred HHHHHHHHHHhC----------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhc-CcEEEEEC
Confidence 556666666653 345788888889999999999999999999988776654 334445 99999998
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.++.+.+.++. .++++|++..|.|||+.+. ++++|.++|++++ +++|.+++.. +...
T Consensus 136 ~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~---Di~~I~~la~~~~--lvVD~t~~s~-~~~~--- 192 (384)
T PRK06434 136 TDRLNSLDFDP--------------SNYDLIYAESITNPTLKVP---DIKNVSSFCHEND--VIVDATFASP-YNQN--- 192 (384)
T ss_pred CCChhheeecC--------------CCeeEEEEEcCCCCCceee---cHHHHHHHHHHcC--eEEECCCCCc-ccCC---
Confidence 76433332221 2688999999999999874 6888888888888 4569997532 2222
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhc-ccCC-CChHHHHHHHHHcCC
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMS-SFGL-VSSQTQYLLSRMLSD 319 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~-~~~~-~s~~~q~~~~~~l~~ 319 (464)
++ .+ ...+++.|.+|.++-+| .=.|.++++++.+.+.++... .++. .+++..+.+..-|+.
T Consensus 193 --pl-~~-------------gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t 256 (384)
T PRK06434 193 --PL-DL-------------GADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT 256 (384)
T ss_pred --ch-hc-------------CCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc
Confidence 11 11 45578899999996433 446777776665655444332 3332 344433333333333
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
+..+.++..+....+.+.|+.+
T Consensus 257 -------L~~R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 257 -------LGLRMEKHNKNGMELARFLRDS 278 (384)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHcC
Confidence 3444445556667778888776
No 306
>PRK05965 hypothetical protein; Provisional
Probab=99.60 E-value=3.9e-12 Score=129.34 Aligned_cols=355 Identities=13% Similarity=0.075 Sum_probs=193.5
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ......+ ..-..+.+..+|+.+.+...
T Consensus 39 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------~~~~~~~--~~~~~~~~~~lae~L~~~~p-- 104 (459)
T PRK05965 39 TLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRE----------LPYATGY--FHFGSEPAIRLAAKLAERAP-- 104 (459)
T ss_pred EEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHh----------cCCcccc--cccCCHHHHHHHHHHHhhCC--
Confidence 4444556788998654 3333 346666666664221 1111111 01113444556666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
-..+.++++++++|++..+++.... + ..+|+...-+|++.........+. .+..++..
T Consensus 105 --~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~ 182 (459)
T PRK05965 105 --GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSP 182 (459)
T ss_pred --CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCC
Confidence 1346899999999999999886421 2 257999999998764321111011 01122211
Q ss_pred C--CCCcccCH--------HHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 165 S--SNGFRITI--------SALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 165 ~--~~~~~~d~--------~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
. ...+.-|. +.+++.+.+. ...++.+|++.-.....|.. .|.+-++++.++|++||+++|.||+..+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tG 260 (459)
T PRK05965 183 YPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITG 260 (459)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcc
Confidence 0 00111122 4555555431 11367666665335556764 5777899999999999999999999987
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hcccC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MSSFG 303 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~~~~ 303 (464)
+.-.+. . .. .+... ..+. +-+++|.+| .| +.+|.+++++ .+.+.+.. ....+
T Consensus 261 fGRtG~--~-~a-~~~~g---------v~PD---iv~~gKgl~-gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~h~~T~ 322 (459)
T PRK05965 261 FGRTGP--L-FA-CEAEG---------VVPD---LMTVAKGLT-SGYVPMGAVLMSD-HVYQGIADGAGAAAPVGHGYTY 322 (459)
T ss_pred CccCch--h-hh-HhhcC---------CCCC---eEEechhhc-cCCcceeEEEEcH-HHHHHHhccccccccccccCCC
Confidence 422222 1 11 11110 1123 337899998 89 5999999954 45444321 11122
Q ss_pred CCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCccEEEEEecCcccccCC----
Q 037587 304 LVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKV---AGIRCLKSNAGLFCWVDMRHLLVSNT---- 373 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~g~~~~~~~~g~f~~~~l~~~~~~~~---- 373 (464)
..++++.+++.+.|+ +.++ .+.. ++.-++|.+.|++ +.+......-|+++-+++........
T Consensus 323 ~gnpl~~Aaa~a~L~~l~~~~l-~~~~-------~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~ 394 (459)
T PRK05965 323 SAHPVSAAVGLEVLRLYHEGGL-LANG-------QKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDA 394 (459)
T ss_pred CCCHHHHHHHHHHHHHHHhccH-HHHH-------HHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCc
Confidence 356666666555543 3332 1222 2233333344433 22211122346777777743211110
Q ss_pred -hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 374 -FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 374 -~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
......+...++ ++||++.+. +...+|+.... ++++++++++++|.+++++...
T Consensus 395 ~~~~~~~i~~~~~-~~Gll~~~~------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 395 ALDPADRIFDRAY-ANGLVFRAF------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred hhHHHHHHHHHHH-hCCeEEEec------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence 011223555554 679999753 24578998765 6899999999999999987643
No 307
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.60 E-value=1.1e-12 Score=119.70 Aligned_cols=285 Identities=17% Similarity=0.209 Sum_probs=195.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.+.-.++...++.+++.++..++.|||.|++-..+ |+.-...+....|++|..++.+. +-..+++.+.+.+.++
T Consensus 67 n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh--- 141 (385)
T KOG2862|consen 67 NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQH--- 141 (385)
T ss_pred CCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhc---
Confidence 34456777778899999999999999999987665 54333333334499999998764 4567899999999874
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
+++++++++-...||..-+ -+..+-++|++|+.++++|.+-+ .++. +|. . |.++..+
T Consensus 142 --~p~~vfv~hgdsSTgV~q~--~~~~~g~lc~k~~~lllVD~VaS---lggt--~F~-----m---------DewgVDv 198 (385)
T KOG2862|consen 142 --KPKAVFVTHGDSSTGVLQD--LLAISGELCHKHEALLLVDTVAS---LGGT--EFE-----M---------DEWGVDV 198 (385)
T ss_pred --CCceEEEEecCccccccch--HHHHHHHHhhcCCeEEEEechhh---cCCc--cce-----e---------hhhcccE
Confidence 8999999999999999843 25566788999999999999887 5554 321 1 2456777
Q ss_pred EEcCCCcCCCCC-ccEEEEEEecCHHHHHHHHHhc--------------cc-----------CCCChHHHHHHHHHcCCc
Q 037587 267 IVYSLSKDFSMP-GFRVGMIYSNNERVVSAATKMS--------------SF-----------GLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 267 ~l~S~SK~~g~~-GlRiG~l~~~~~~~~~~~~~~~--------------~~-----------~~~s~~~q~~~~~~l~~~ 320 (464)
....--|++|.| |+ +-|..++ ...++++... .| .+++......+.++|..
T Consensus 199 aytgSQKaL~aP~GL--siisfS~-ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~- 274 (385)
T KOG2862|consen 199 AYTGSQKALGAPAGL--SIISFSD-KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALAL- 274 (385)
T ss_pred EEecchhhcCCCCCc--ceeecCH-HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHH-
Confidence 777888999754 64 4455544 3444443221 11 22344555566666653
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+.++-+++..++.++..+++...|+++|++.+... -.-.-.+.+|...+.+ +++.++...++|.+--|
T Consensus 275 -I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~------dVv~~~~~~~~vei~gg- 346 (385)
T KOG2862|consen 275 -IAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWK------DVVAYAMSHYVVEIGGG- 346 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHH------HHHHHHHHhcCEEeccc-
Confidence 23667888888999999999999999987644211 1112234555544332 46777776666666433
Q ss_pred CCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 397 SCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+...+..+||.+-. .+.|.++..++.|+..+.+.+
T Consensus 347 -lg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 347 -LGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred -cCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 344456789999844 467899999999998887653
No 308
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.60 E-value=2.2e-12 Score=132.14 Aligned_cols=353 Identities=13% Similarity=0.123 Sum_probs=191.4
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCC-CCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDY-HGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+... .+..+....+|+.+-+.+.
T Consensus 82 ~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~-------------~~~~~~~~~~~~~~~~~~lae~L~~~~~- 147 (504)
T PLN02760 82 YVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLN-------------KLPFYHSFWNRTTKPSLDLAKELLEMFT- 147 (504)
T ss_pred EEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHh-------------hccceecccccCcHHHHHHHHHHHhhcC-
Confidence 4444556788998774 3333 34666666666422 11111111 1234556666666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc------C-CC-CeEEEcCCCCCChhhhcccCCCcE------------EEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA------D-PG-DAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~ 163 (464)
+.+.+.+++++++++++..+++... . ++ .+|+..+-+|++.........|.. +..++.
T Consensus 148 --~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~ 225 (504)
T PLN02760 148 --ARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC 225 (504)
T ss_pred --CCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC
Confidence 1123578999999999999998762 1 22 578888888877543221111221 111221
Q ss_pred CCCCCccc-----C--------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEe
Q 037587 164 SSSNGFRI-----T--------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 164 ~~~~~~~~-----d--------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
+ ..|.. + .+.+++.+.. ....++.+|++ -| ..-.|.+ .|.+.+++|.++|+++|+++|.|
T Consensus 226 p--~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~iAAvI~-EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~D 300 (504)
T PLN02760 226 P--HYWRFHLPGETEEEFSTRLADNLENLILK--EGPETIAAFIA-EPVMGAGGVIPPPATYFEKIQAVLKKYDILFIAD 300 (504)
T ss_pred C--cccccCCCCCcHHHHHHHHHHHHHHHHHh--cCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEec
Confidence 1 11110 1 1345554432 11234655554 45 4455665 46778999999999999999999
Q ss_pred ccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--------
Q 037587 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-------- 299 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-------- 299 (464)
|++.+ |+..+.. .. .+. + +...-+.+|+|.+| .| +.+|.++++ +.+.+.+...
T Consensus 301 EV~TG--fGRtG~~-~a-~e~---~---------gv~PDivtlgK~lg-gG~~PigAv~~~-~~i~d~~~~~~~~~~~~~ 362 (504)
T PLN02760 301 EVICA--FGRLGTM-FG-CDK---Y---------NIKPDLVSLAKALS-SAYMPIGAVLVS-PEISDVIHSQSNKLGSFA 362 (504)
T ss_pred chhhC--Ccccchh-hH-HHh---c---------CCCCcEEEeccccc-CCccccceEeec-HHHHhhhhcccccccCcc
Confidence 99976 4322101 11 111 1 11112568999998 67 589998885 4555544321
Q ss_pred -cccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCC-h
Q 037587 300 -SSFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNT-F 374 (464)
Q Consensus 300 -~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~-~ 374 (464)
...++.++++.+++.+.|+ ..++ .++.+++-+.+++. |.+ |.+.++......-|+++-+++........ .
T Consensus 363 h~~T~~gnPl~~Aaala~Le~i~~~~l-~~~~~~~g~~l~~~---L~~-l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~ 437 (504)
T PLN02760 363 HGFTYSGHPVSCAVALEALKIYKERNI-PEHVNKIAPRFQDG---IKA-FSGSPIIGEIRGTGLILGTEFVDNKSPNDPF 437 (504)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHH---HHH-HhcCCCeeeEEeCceEEEEEEecCCcccccc
Confidence 1122356666666666554 2222 22233333322222 211 23333322122335677777743211110 0
Q ss_pred ----hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 375 ----EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ----~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.....+...++ ++||++.++. ..+||+... +++++++++++++.+++++..
T Consensus 438 ~~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 438 PAEWGVGAYFGAECK-KRGMLVRVAG-------DNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred cchhHHHHHHHHHHH-hCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11223555554 6799997631 358999765 699999999999999987764
No 309
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.60 E-value=4.9e-12 Score=128.02 Aligned_cols=352 Identities=13% Similarity=0.075 Sum_probs=189.6
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.++++++.+ .+...+......+....+|+.+.+...
T Consensus 39 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~l~~~~p-- 103 (442)
T PRK13360 39 YYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAG-------------ELDYAPAFQMGHPKAFELANRIAEIAP-- 103 (442)
T ss_pred EEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHH-------------hCCCcccCCcCCHHHHHHHHHHHHhCC--
Confidence 4444556778998755 2333 34667777766532 111111111123445566666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
-..+.++++++++|++..+++.... + ..+|+...-+|++....+....|. .+..+|..
T Consensus 104 --~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~ 181 (442)
T PRK13360 104 --GGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHT 181 (442)
T ss_pred --CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCC
Confidence 1235899999999999999886421 2 257999998888764321111010 11222221
Q ss_pred C---CCCccc--------CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 S---SNGFRI--------TISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~---~~~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. ...|.. .++.+++.+... ...++.+|++.....-.|.. .+.+.+++|.++|+++|+++|+||++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~t 259 (442)
T PRK13360 182 LDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT 259 (442)
T ss_pred chhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 1 001111 134566665421 12355555544335556765 467779999999999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hccc
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MSSF 302 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~~~ 302 (464)
++.-.+. .+ . .+.. + ..+. +.+|+|.+| .| +.+|.+++++ .+.+.+.. ....
T Consensus 260 G~GrtG~--~~-a-~~~~-g--------v~PD---ivt~gK~l~-gG~~P~gav~~~~-~i~~~~~~~~~~~~~~~~~~T 321 (442)
T PRK13360 260 GFGRLGA--PF-A-AQYF-G--------VTPD---LLTCAKGLT-NGAIPMGAVFVSS-EIHDAFMQGPEAGIEFFHGYT 321 (442)
T ss_pred CCCCCcc--ch-h-hhhc-C--------CCCc---eeeeeeccc-cCccceEEEEEcH-HHHHHhhcCCccccccccCCC
Confidence 6421122 11 1 1111 1 1122 338999997 67 7899988844 45444322 1111
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ce-ee-cCCccEEEEEecCcccccCChhHHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IR-CL-KSNAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~-~~-~~~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+..++++.+++.+.|+--. + +...+..++.-+++.+.|+++. .. +. ....|+++-+.+........ ....+
T Consensus 322 ~~g~pl~~aaa~a~L~~l~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~-~~~~~ 395 (442)
T PRK13360 322 YSGHPLACAAALATLDLYE--R---EGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG-KRAYE 395 (442)
T ss_pred CCCCHHHHHHHHHHHHHHH--h---CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc-hhHHH
Confidence 2345666666555554211 0 0122333334444455554331 11 11 11234555555532111111 12234
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++..++ ++||++.++ .+.+||+... ++++++++++++|.+++++
T Consensus 396 ~~~~l~-~~Gvl~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 396 VFLKCF-EKGLMIRYT-------GDILALSPPLIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred HHHHHH-HCCcEEEec-------CCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 566665 679999753 2469999766 7999999999999999865
No 310
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.60 E-value=1.2e-13 Score=136.13 Aligned_cols=269 Identities=16% Similarity=0.141 Sum_probs=172.1
Q ss_pred CcEEEe-CChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEecCCCCCcccCHHHHHH-HHHHHhh
Q 037587 110 NKLVLT-AGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIHCSSSNGFRITISALEN-AYQQAQT 185 (464)
Q Consensus 110 ~~i~it-~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~~ 185 (464)
.+|+++ ++++.+++.++..++.+|+++++...+..+. ...++.. |.. ..+..++..++ .+..++++ .+++
T Consensus 67 ~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~r~~~~a~~~-g~~-~~~~~~~~~g~-~~~~~~~~~~l~~--- 140 (360)
T PRK05355 67 YKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSKKAIKEAKKY-GEV-NVAASSEDDGF-TYIPPLDEWQLSD--- 140 (360)
T ss_pred cEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCc-eEEecccccCC-CCCCChhhccCCC---
Confidence 345554 7788889999999999999988887665432 2334444 754 44544321233 23333333 4432
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|.+++-.|.||...+ ++.++ +|+++|+|.+.+ ++.. + .++.. .+
T Consensus 141 ---~~~~V~~th~eTstGv~~~--~i~~i------~g~l~vVDavss---~g~~--~-idv~~-------------~d-- 188 (360)
T PRK05355 141 ---DAAYVHYTSNETIDGTEFH--ELPDT------GDVPLVADMSSD---ILSR--P-IDVSK-------------FG-- 188 (360)
T ss_pred ---CCCEEEEccCCCcceEecC--ccccc------CCCcEEEEcCcc---ccCc--c-CCHHH-------------cc--
Confidence 6889999999999999984 34444 799999999997 4433 1 22211 13
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--------------hcccCCCChHHHHHHHHHcCCchhhHH-HHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--------------MSSFGLVSSQTQYLLSRMLSDKKFTCN-YMKEN 330 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--------------~~~~~~~s~~~q~~~~~~l~~~~~~~~-~~~~~ 330 (464)
+++.|..|.+|.+| +|+++.+++.+.+ +.. ...+++++.....++.++|+.-. +. -++..
T Consensus 189 ~~~~ssqK~lgP~G--lg~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~--~~gG~e~i 263 (360)
T PRK05355 189 LIYAGAQKNIGPAG--LTIVIVREDLLGR-ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLK--EQGGVAAM 263 (360)
T ss_pred EEEEeccccccCCc--eEEEEECHHHHhh-cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHH--HccCHHHH
Confidence 77889999999777 6888885554432 211 11234445555555555554321 22 26677
Q ss_pred HHHHHHHHHHHHHHHHhCCCe-eecC---CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 037587 331 RKRLRKRKEMLVSGLKVAGIR-CLKS---NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWF 406 (464)
Q Consensus 331 ~~~~~~~~~~l~~~l~~~g~~-~~~~---~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 406 (464)
.++.++..+++.+.|+++++. ...+ ..+..+.+.++.. ....++...+ .++|+.+.+|.. ..+.+
T Consensus 264 ~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~------~~~~~~~~~~-~~~Gi~~~~~~~----~~g~v 332 (360)
T PRK05355 264 EKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE------ELDKKFLAEA-KAAGLVGLKGHR----SVGGM 332 (360)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh------HHHHHHHHHH-HHCCCcccCCCC----ccCcE
Confidence 788888889999999998742 2111 2333455566542 1112344444 467999866653 24689
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 407 RICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 407 Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
|+|+.. .+.++++.+++.|+++++++
T Consensus 333 RiS~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 333 RASIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999977 78999999999999988765
No 311
>PRK07046 aminotransferase; Validated
Probab=99.60 E-value=2.3e-12 Score=130.63 Aligned_cols=335 Identities=13% Similarity=0.038 Sum_probs=188.2
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+ ...+ ..|.+.+++.+..+. ...+. ...+....+|+.+.+..
T Consensus 68 ~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~-------------~~~~~---~~~~~~~~lAe~l~~~~--- 128 (453)
T PRK07046 68 RFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARR-------------GLTTM---LPSEDAAWVGEELARRF--- 128 (453)
T ss_pred EEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHh-------------CCCCC---CCCHHHHHHHHHHHHHh---
Confidence 4444556778998655 3333 346677777664221 11111 12345555666665432
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcc--cCC----------Cc------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLK--WRP----------GV------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~--~~~----------g~------~~~~v~~~ 164 (464)
..+.+.++++++|+...+++... ...++|+...-+|++...... ... |. .+..++
T Consensus 129 ---~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 203 (453)
T PRK07046 129 ---GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE-- 203 (453)
T ss_pred ---CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC--
Confidence 24689999999999999988642 234678888888887632111 000 11 011111
Q ss_pred CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 165 SSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 165 ~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
| -|++.+++.+.. .++.+|++ .| ..-.|.+ .+.+.++++.++|+++|+++|.||+.. +..+-. .
T Consensus 204 ----~-nd~~~l~~~l~~-----~~vAavi~-EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~G--g 269 (453)
T PRK07046 204 ----F-NDLAALEAALAD-----GDVAAVLA-EPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPG--G 269 (453)
T ss_pred ----C-CCHHHHHHHhCC-----CCeEEEEE-CCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCc--c
Confidence 2 167888887731 35655555 56 3334544 455789999999999999999999986 322211 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----------cccCCCChHHHH
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----------SSFGLVSSQTQY 311 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----------~~~~~~s~~~q~ 311 (464)
......+. +. +-+|+|.+| .|+.+|.++++ +.+.+.+... ...+..++++.+
T Consensus 270 ~~~~~gv~------------PD---i~t~gK~lg-gG~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~a 332 (453)
T PRK07046 270 YTRAHGLE------------PD---FLVVGKPIA-GGVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMA 332 (453)
T ss_pred hhHHhCCC------------cc---ceeehhhhc-CCCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHH
Confidence 11111121 22 337999998 89999999984 4455544321 111234666666
Q ss_pred HHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcc-ccc------C-ChhHHHH
Q 037587 312 LLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHL-LVS------N-TFEAEKE 379 (464)
Q Consensus 312 ~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~-~~~------~-~~~~~~~ 379 (464)
++.+.|+ ..+. .+..+++-+ ..++.|.+.+.+.++.+. ...+. .+.+.+... ... . +......
T Consensus 333 a~~a~L~~l~~~~~-~~~~~~~g~---~l~~~L~~l~~~~~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 407 (453)
T PRK07046 333 AMRATLAEVMTEAA-YAHMLALAA---RLAAGLRAVIARHGLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAA 407 (453)
T ss_pred HHHHHHHHHhcccH-HHHHHHHHH---HHHHHHHHHHHhCCCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHH
Confidence 6555544 3332 222333333 333334444455565432 22333 344443211 100 0 1111223
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++..++ ++||++.|. .+.++++.. +++++++.+++++.+++++.
T Consensus 408 ~~~~~~-~~Gv~~~~~-------~~~~~~~p~-~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 408 LHLYLL-NRGVLITPF-------HNMMLVCPA-TTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHH-HCCCEEecc-------cCcEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence 555555 579999763 134788876 69999999999999998753
No 312
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=3.2e-12 Score=129.21 Aligned_cols=348 Identities=14% Similarity=0.088 Sum_probs=188.8
Q ss_pred CCCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+- +.+ ..|.+.+++.++.+. ...+. -..+....+|+.+.+...
T Consensus 45 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-------------~~~~~---~~~~~~~~la~~l~~~~p- 107 (428)
T PRK12389 45 AYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAEN-------------GVLYG---TPTELEIEFAKMLKEAIP- 107 (428)
T ss_pred CEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHh-------------CCccC---CCCHHHHHHHHHHHHhCC-
Confidence 355555667889987652 233 346677777664221 11111 113445666666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEE--------EEecCC-CCCc---
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIV--------PIHCSS-SNGF--- 169 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~--------~v~~~~-~~~~--- 169 (464)
..+.++++++++|++..+++... ....+|+...-+|++....+....|.... .++... .+-.
T Consensus 108 ----~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (428)
T PRK12389 108 ----SLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP 183 (428)
T ss_pred ----CCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcC
Confidence 24689999999999999988642 22367888888888764332211121110 000000 0000
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
..|++.+++.+.+. +.++.+|++.-...-.|.+. +.+.++++.++|+++|+++|.||++.++.. .. ....+
T Consensus 184 ~~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~----~~a~~ 255 (428)
T PRK12389 184 FNDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MY----GGAQD 255 (428)
T ss_pred CCCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-Cc----chhhH
Confidence 11678888877542 23566555543355567655 577899999999999999999999987411 11 11111
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-----hcccCCCChHHHHHHHHHcC---Cc
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-----MSSFGLVSSQTQYLLSRMLS---DK 320 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~---~~ 320 (464)
... ..+. +-+|+|.+| .|+.+|.+++ ++.+.+.+.. ....+..++++.+++.+.|+ +.
T Consensus 256 ~~g---------v~PD---ivt~gK~lg-gG~Pi~av~~-~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~ 321 (428)
T PRK12389 256 LLG---------VEPD---LTALGKIIG-GGLPIGAYGG-RKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE 321 (428)
T ss_pred HhC---------CCCC---eeeechhhc-CCCceeEEeE-HHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc
Confidence 110 1122 348999998 8999999988 4455554431 11112356666666555554 22
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCccccc-------CChhHHHHHHHHHHHhcCeEE
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHLLVS-------NTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~~~~-------~~~~~~~~l~~~ll~~~gI~v 392 (464)
+. .+..+++-+.+++ .|.+..+++++.+.. ...|++ -+.+...... .+......+...++ ++||++
T Consensus 322 ~l-~~~~~~~g~~l~~---~L~~l~~~~~~~~~v~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~ 395 (428)
T PRK12389 322 GV-YEKLDRLGAMLEE---GILEAAEKHGITITINRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINL 395 (428)
T ss_pred cH-HHHHHHHHHHHHH---HHHHHHHhCCCCEEEEecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEe
Confidence 22 2222222222222 222222334432221 233443 3444321100 01111234555554 679999
Q ss_pred eCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 393 SPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
.+.. .+.+.+++. +++++++++++++++++++
T Consensus 396 ~~~~------~~~~~~~l~-~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 396 APSK------YEAWFLTTA-HTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred ecCC------CCCeeecCC-CCHHHHHHHHHHHHHHHHh
Confidence 8752 112455554 5899999999999999864
No 313
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.60 E-value=2.3e-13 Score=135.58 Aligned_cols=286 Identities=11% Similarity=0.029 Sum_probs=176.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCC-CCCcEEEeC-ChHHHHHHHHHHhcCC-CCeEEEcCCCCCChhhh-c-ccCCCc-EEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKF-DPNKLVLTA-GSTAANETLMFCLADP-GDAFLLPTPYYPGFDRD-L-KWRPGV-EIV 159 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~-~~~~i~it~-G~~~al~~~~~~l~~~-gd~Vlv~~p~y~~~~~~-~-~~~~g~-~~~ 159 (464)
..+.|+.++++++ + ++++|+++. ++|++++.++..++++ ++.|++ .-.|+.-... + +.. |+ ++.
T Consensus 50 ~~~~r~~l~~l~~--------~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~-g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELLS--------LPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQL-KLEDPR 119 (378)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhc-CCCCce
Confidence 3566666777665 4 345788875 8999999999999874 444444 3344432221 2 334 88 888
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.++.+. +..+|+++++ .++.|.+++.+|.||..+| +++|++ +++|+++|+|.+.+ ++..
T Consensus 120 ~~~~~~--g~~~d~~~i~-----------~~~~V~~~h~~t~tG~~~p---i~~I~~--~~~g~~~vVDa~qs---~G~~ 178 (378)
T PRK03080 120 VLEADY--GSLPDLSAVD-----------FDRDVVFTWNGTTTGVRVP---VARWIG--ADREGLTICDATSA---AFAL 178 (378)
T ss_pred EeccCC--CCCCCHhhcC-----------CCCCEEEEecCCccceecc---chhhcc--ccCCCeEEEecccc---cccC
Confidence 887652 3356666532 2356888999999999987 445555 67899999999987 4433
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHhc------------------
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKMS------------------ 300 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~~------------------ 300 (464)
+ .++. +..+++.|..|+++. +| +|+++.+++.+.+ +....
T Consensus 179 --p-idv~---------------~iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~ 237 (378)
T PRK03080 179 --P-LDWS---------------KLDVYTFSWQKVLGGEGG--HGMAILSPRAVER-LESYTPARPIPKFFRLTKGGKAI 237 (378)
T ss_pred --C-CCHH---------------HCcEEEEehhhhCCCCCc--eEEEEECHHHHHh-hhcccCCCCCchhheeccchHHh
Confidence 1 2221 124778999999853 55 7998886544332 22100
Q ss_pred -------ccCCCChHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeeecC----CccEEEEEecC
Q 037587 301 -------SFGLVSSQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVAG-IRCLKS----NAGLFCWVDMR 366 (464)
Q Consensus 301 -------~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~----~~g~f~~~~l~ 366 (464)
.+++.+.....++.++++. +.+ -++...++.++..+++.+.|++.+ +.+..+ .++..+.+.++
T Consensus 238 ~~~~~~~t~~tp~i~~i~~l~~al~~---l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~ 314 (378)
T PRK03080 238 ENSFKGQTINTPSMLTVEDYLDQLDW---ANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFV 314 (378)
T ss_pred hhhhcCCcccCchHHHHHHHHHHHHH---HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcC
Confidence 0111222222222333321 122 246666777778888888888875 455421 23234555555
Q ss_pred cccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 367 HLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.. . .. ...++...+++ +||.++.|... . ..+.+|+|+.. .++++++.++++|++++++.+
T Consensus 315 ~~-~-~~--~~~~~~~~l~~-~~i~v~~g~~~-~-~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 315 DA-Q-AA--VDAAAVAKLLR-ENGAVDIEPYR-D-APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred Cc-h-HH--HHHHHHHHHHH-cCCeecccccc-C-CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 30 0 00 11235566654 58888876432 1 35789999987 789999999999999888765
No 314
>PRK06917 hypothetical protein; Provisional
Probab=99.59 E-value=1e-11 Score=125.97 Aligned_cols=363 Identities=15% Similarity=0.126 Sum_probs=195.8
Q ss_pred cCCCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHc
Q 037587 26 NNPYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIR 101 (464)
Q Consensus 26 ~~~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 101 (464)
+..|..+.+...+||+..+ ...+ ..|.+.+++.++... . ...+.. .-..+.+..+|+.+.+..
T Consensus 21 ~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~----------~--~~~~~~-~~~~~~~~~lae~L~~~~ 87 (447)
T PRK06917 21 KGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEE----------V--SFVYRS-QFTSEPAEKLAKKLSDLS 87 (447)
T ss_pred eeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhh----------C--cCcccc-ccCCHHHHHHHHHHHHhC
Confidence 3345555566788998765 3333 357777777665321 0 001110 011355556666665432
Q ss_pred CCCCCCCCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCCCChhhhcccCCCc------------EEEEE
Q 037587 102 GNKVKFDPNKLVLTAGSTAANETLMFCLA-------DPG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPI 161 (464)
Q Consensus 102 ~~~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v 161 (464)
. -..+.++++++++|++..+++... .+| .+|+...-+|++....+....+. .+..+
T Consensus 88 p----~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~ 163 (447)
T PRK06917 88 P----GDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTI 163 (447)
T ss_pred C----CCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEe
Confidence 1 123579999999999999988752 123 67998888888765332111111 01111
Q ss_pred ecCCCC--Cccc--------CHHHHHHHHHHHhhcCCceEEEEEeCC-C-CCCCC-CCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 162 HCSSSN--GFRI--------TISALENAYQQAQTLNLKVKGVLITNP-S-NPLGT-AMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 162 ~~~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P-~-NPtG~-~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
+..... .+.- +++.+++.++.. ...++.+|++. | . +--|. ..|.+.++++.++|+++|+++|.|
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~--~~~~iAAvi~E-Pi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~D 240 (447)
T PRK06917 164 SAPYCYRCPVQKVYPTCQLACATELETAIERI--GAEHIAAFIAE-PIIGAAGAAVVPPKGYYKVIKEICDHYDILFIAD 240 (447)
T ss_pred CCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEe-ccccCcCceecCCHHHHHHHHHHHHHcCCEEEEe
Confidence 111000 0000 234555555421 11356666554 5 3 33445 456888999999999999999999
Q ss_pred ccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHhc------c
Q 037587 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKMS------S 301 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~~------~ 301 (464)
|++.+ |+..+..+ . .+.. + ..+. +-+|+|.+| .|+ .+|.++++ +.+.+.+.... .
T Consensus 241 Ev~tG--fGRtG~~~-a-~~~~-g--------v~PD---i~~~gK~l~-~G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~~ 302 (447)
T PRK06917 241 EVMTG--LGRTGAMF-A-MEHW-G--------VEPD---IMTLGKGLG-AGYTPIAATVVS-DRVMEPILRGSRSIMSGH 302 (447)
T ss_pred chhhC--cCcccchh-h-HHhc-C--------CCCC---EEEeeehhc-cCCcceEEEEEc-HHHHHHHhccCccccccc
Confidence 99986 43221011 1 1111 1 1122 347899998 885 89999985 44555443211 1
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCccccc-CC---
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVS-NT--- 373 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~-~~--- 373 (464)
.+..++++.+++.+.|+--+- . ...+.+++.-++|.+.|++ +++......-|+++.+++...... ..
T Consensus 303 T~~gnpl~~aaa~a~l~~l~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~ 377 (447)
T PRK06917 303 TLSANPLSAATALAVLEYMEK-H----NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSK 377 (447)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-C----CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcc
Confidence 123566666666665542110 1 1122222233333333333 343222223456777777321110 00
Q ss_pred -hhHHHHHHHHHHHhcCeEEeCCCC-CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 374 -FEAEKELWKKIIFEVGLNISPGSS-CHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 374 -~~~~~~l~~~ll~~~gI~v~pg~~-f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
......+...++ ++||++.|+.. ......+.+|++... +++++++.++++|.+++++.
T Consensus 378 ~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 378 SQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred hhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 011234555554 67999987521 111123579998775 69999999999999998765
No 315
>PRK06148 hypothetical protein; Provisional
Probab=99.59 E-value=2.1e-12 Score=142.64 Aligned_cols=359 Identities=9% Similarity=-0.003 Sum_probs=198.1
Q ss_pred CCCCCCCCceEEeeccccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
|..+.....+||+..+...+. .|.+.+++.++... +.....|. .+....+|+.+.....
T Consensus 617 ~l~D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~----------l~~~~~~~-----~~~~~~lAe~L~~~~p---- 677 (1013)
T PRK06148 617 WLIDNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAAR----------LNTNTRYL-----HDAIVAYAERLTATLP---- 677 (1013)
T ss_pred EEEECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhh----------cCCcCCcC-----CHHHHHHHHHHHHhCC----
Confidence 444455677899987655554 47777777765321 11111222 3444555665544321
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC--CCCCcc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS--SSNGFR 170 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~--~~~~~~ 170 (464)
-..+.+.++++++||+..+++... ....+|+...-+|++....+....+. .+..++.. ....|.
T Consensus 678 ~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 757 (1013)
T PRK06148 678 DGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPER 757 (1013)
T ss_pred CCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCC
Confidence 123678999999999999988742 23467888888887764322111010 11111110 001121
Q ss_pred c-C-------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 171 I-T-------ISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 171 ~-d-------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
. + .+.+++.++.....+.++.+||+--...-.|. ..|.+.++++.++|+++|+++|.||+..++ +..+.
T Consensus 758 ~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf--GRtG~ 835 (1013)
T PRK06148 758 WPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF--GRVGS 835 (1013)
T ss_pred CChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC--CCCCC
Confidence 1 1 13455555432223345666555422333344 557788999999999999999999999874 32210
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh---cccCCCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM---SSFGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~ 318 (464)
.+.....+ +.+--+-+++|.+| .|+.+|.++++ +.+.+.+..- ...+..++++.+++.+.|+
T Consensus 836 ~~~a~e~~-------------gv~PDivt~gK~lg-gG~Plgav~~~-~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~ 900 (1013)
T PRK06148 836 HWWAFETQ-------------GVVPDIVTMGKPIG-NGHPMGAVVTT-REIADSFDNGMEYFNTFGGNPVSCAIGLAVLD 900 (1013)
T ss_pred cchhhhhc-------------CCCcceeeeccccc-CCcceEEEEEc-HHHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence 11111111 11222458899998 89999999994 5555544321 1122356676666665544
Q ss_pred ---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEe
Q 037587 319 ---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 319 ---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
+.+. .+...++-+.+++. |.+..+++++....-.-|+++-+++...... ........++..++ ++||++.
T Consensus 901 ~i~~e~l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~ 975 (1013)
T PRK06148 901 IIEDEDL-QRNALEIGNYLLAG---LRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIG 975 (1013)
T ss_pred HHhhccH-HHHHHHHHHHHHHH---HHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEe
Confidence 3332 22233333333332 2222223333222223467888887532111 11122234555655 6799998
Q ss_pred CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 394 PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+...+ .+.+||.... +++++++.++++|.+++.+.
T Consensus 976 ~~g~~----~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 976 TEGPH----DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred ccCCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 65322 4679998876 79999999999999998753
No 316
>PRK06062 hypothetical protein; Provisional
Probab=99.59 E-value=3.8e-12 Score=129.16 Aligned_cols=355 Identities=13% Similarity=0.098 Sum_probs=192.7
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+... -..+.+..+|+.+.+...
T Consensus 46 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~~-~~~~~~~~lae~L~~~~p-- 109 (451)
T PRK06062 46 YVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAA-------------RLCTVAPA-HANDARSEAARLIAERAP-- 109 (451)
T ss_pred EEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHH-------------hcCCcCCc-cCCHHHHHHHHHHHHhCC--
Confidence 4555567788998765 3333 34666666666422 11111111 124555666666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc-----------EEEEEecCC--CCCc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV-----------EIVPIHCSS--SNGF 169 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~-----------~~~~v~~~~--~~~~ 169 (464)
-..+.|+++++++|++..+++... ....+|+...-+|++....+....+. .+..++.+. ...|
T Consensus 110 --~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 187 (451)
T PRK06062 110 --GDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEF 187 (451)
T ss_pred --CCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCcccccc
Confidence 124689999999999999988642 23367888888887764332211111 011221110 0011
Q ss_pred c--cC-------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 170 R--IT-------ISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 170 ~--~d-------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
. -+ ++.+++.++. ....++.+|++.--..-.|.. .|.+.++++.++|+++|+++|.||++.+ |+..
T Consensus 188 ~~~~~~~~~~~~~~~le~~l~~--~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tG--fGRt 263 (451)
T PRK06062 188 HATTEEEECERALAHLERVIEL--EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAG--FGRT 263 (451)
T ss_pred CCCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccC--CCcC
Confidence 0 11 4556666542 112356665554324445665 4677899999999999999999999987 4322
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHh----cccCCCChHHHHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKM----SSFGLVSSQTQYLLS 314 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~----~~~~~~s~~~q~~~~ 314 (464)
+ .... .+.. + ..+. +.+|+|.+| .|+ .+|.+++.+ .+.+.+... ...++.++++.+++.
T Consensus 264 G-~~~a-~~~~-g--------v~PD---i~t~gK~lg-gG~~Pigav~~~~-~i~~~~~~~~~~~~~T~~gnpl~~Aaa~ 327 (451)
T PRK06062 264 G-KWFA-IEHF-G--------VVPD---LITFAKGVN-SGYVPLGGVAISE-AIAATFADRPYPGGLTYSGHPLACAAAV 327 (451)
T ss_pred c-HHHH-HHhc-C--------CCCC---eeeechhhh-cCCcCcEEEEEcH-HHHHHhccCCCCCCCCCCCCHHHHHHHH
Confidence 1 1111 1111 0 1122 448999998 784 899999854 555554321 112234566666666
Q ss_pred HHcCC---chhhHHHHHHHH-HHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC----C----hhHHHHHHH
Q 037587 315 RMLSD---KKFTCNYMKENR-KRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN----T----FEAEKELWK 382 (464)
Q Consensus 315 ~~l~~---~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~----~----~~~~~~l~~ 382 (464)
+.|+- .++ .++.+++- +.++ +.|.+...+++.......-|+++-+++....... . ......+..
T Consensus 328 a~L~~l~~~~l-~~~~~~~G~~~l~---~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (451)
T PRK06062 328 ATINAMEEEGI-VENAARIGAEVLG---PGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKA 403 (451)
T ss_pred HHHHHHHhcCH-HHHHHHHHHHHHH---HHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHH
Confidence 55542 222 12222221 1222 2222222223321111233567777764211000 0 011234555
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.++ ++||++.+. .+.+|++... +++++++++++++.+++++.+
T Consensus 404 ~l~-~~Gvl~~~~-------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 404 ACK-ERGLLPFVN-------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred HHH-HCCcEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 554 679998642 2469998865 799999999999999997654
No 317
>PRK07481 hypothetical protein; Provisional
Probab=99.59 E-value=1.1e-11 Score=125.84 Aligned_cols=360 Identities=12% Similarity=0.050 Sum_probs=191.9
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. ......+. ....+.+..+|+.+.+..+
T Consensus 34 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~----------~~~~~~~~--~~~~~~~~~lae~L~~~~~- 100 (449)
T PRK07481 34 VYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDE----------LEYYSTFD--GTTHPRAIELSYELIDMFA- 100 (449)
T ss_pred cEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHh----------ccceeccc--ccCCHHHHHHHHHHHHhcC-
Confidence 35555566778998654 3334 346666776664221 11111110 1123555666666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
+-..+.++++++++|++..+++.... +| .+|+...-+|++....+....+- .+..++.
T Consensus 101 --~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~ 178 (449)
T PRK07481 101 --PEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVET 178 (449)
T ss_pred --CCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCC
Confidence 01235899999999999999886421 23 57888888888754321111111 1122221
Q ss_pred CC--CCCcc-cCHHHHHHHHH----HHh--hcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 164 SS--SNGFR-ITISALENAYQ----QAQ--TLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 164 ~~--~~~~~-~d~~~l~~~i~----~~~--~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
+. ...|. -|++.+++.+. +.. ....++.+|++.-...-.|.. .+.+.++++.++|+++|+++|.||+..+
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tG 258 (449)
T PRK07481 179 PWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTG 258 (449)
T ss_pred CcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhC
Confidence 10 00121 13444433321 111 112456665554334445664 5677799999999999999999999987
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh---------cccC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM---------SSFG 303 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~---------~~~~ 303 (464)
+.-.+. .+ . .+.. + ..+. +-+++|.+| .| +.+|.+++++ .+.+.+... ...+
T Consensus 259 fGRtG~--~~-a-~~~~-g--------v~PD---iv~~gKgl~-gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~h~~T~ 320 (449)
T PRK07481 259 FGRTGS--WF-G-SRGW-G--------VKPD---IMCLAKGIT-SGYVPLGATMVNA-RIADAFEANADFGGAIMHGYTY 320 (449)
T ss_pred cCcCch--hh-H-hhhc-C--------CCCC---EEEEeeccc-CCCcCceEEEEcH-HHHHHHhccCccccccccCCCC
Confidence 422221 11 1 1111 0 1123 337799998 78 5999999854 455544321 1112
Q ss_pred CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCcccccC---C--h
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRHLLVSN---T--F 374 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~~~~~~---~--~ 374 (464)
..++++.+++.+.|+--+- .+..+ ..++.-+++.+.|++ +++....-.-|+++.+++....... + .
T Consensus 321 ~gnpl~~aaa~a~L~~l~~-~~l~~----~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~ 395 (449)
T PRK07481 321 SGHPVACAAALATLDIVVR-EDLPA----NAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSK 395 (449)
T ss_pred CCCHHHHHHHHHHHHHHHh-hhHHH----HHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchh
Confidence 3466666666665542110 11122 222223333333333 3332222234577778774321100 0 1
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.....+...++ ++||++.+.. ..+||+... ++++++++++++|.+++++..
T Consensus 396 ~~~~~~~~~~~-~~Gvl~~~~g-------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 396 GYANAVADVAR-ENGVLVRPSG-------TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred HHHHHHHHHHH-hCCeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 11224555554 6799998642 248888765 699999999999999997654
No 318
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.58 E-value=1.3e-12 Score=128.47 Aligned_cols=324 Identities=14% Similarity=0.117 Sum_probs=187.8
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. ...+.+. -..+.+..+++.+.+..
T Consensus 17 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~-------------~~~~~~~-~~~~~~~~la~~l~~~~--- 79 (364)
T PRK04013 17 YVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEK-------------LVVAGPM-FEHEEKEEMLEELSKWV--- 79 (364)
T ss_pred EEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHh-------------cCCccCC-cCCHHHHHHHHHHHhhc---
Confidence 4444556678998664 2333 345566666664221 1111111 11344455555554332
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-CCC-CeEEEcCCCCCChhhhcccCCC-------cE-----EEEEecCCCCCcc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-DPG-DAFLLPTPYYPGFDRDLKWRPG-------VE-----IVPIHCSSSNGFR 170 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~~g-------~~-----~~~v~~~~~~~~~ 170 (464)
..+.+++++++++++..+++... .+| ++|+...-+|++....+....+ .. +..+| |
T Consensus 80 ---~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~------~- 149 (364)
T PRK04013 80 ---NYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP------F- 149 (364)
T ss_pred ---CCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec------C-
Confidence 23589999999999999998753 245 7899999998876433222111 11 11122 1
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhh
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA 249 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l 249 (464)
.|++.+++.+.+ ++++|++.......|.. .+.+.++++.++|+++|+++|.||++.++ -.+. +.... .
T Consensus 150 ~d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~---~~a~~-~ 218 (364)
T PRK04013 150 NDVEAAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK---FLAIE-H 218 (364)
T ss_pred CCHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc---hhHHH-h
Confidence 156777777643 77777666445545554 46678999999999999999999999874 2222 11111 1
Q ss_pred hhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 250 VMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 250 ~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
.. ..+. +-+++|.+| .|+.+|.++.+.+ +.. . .....+..++++.+++.+.|+--+- ++.+++
T Consensus 219 ~g---------v~PD---iv~~gK~lg-gG~P~~a~~~~~~-~~~-~-~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~ 281 (364)
T PRK04013 219 YK---------VEPD---IVTMGKGIG-NGVPVSLTLTNFD-VER-G-KHGSTFGGNPLACKAVAVTLRILRR-ERLVEK 281 (364)
T ss_pred cC---------CCCC---EEEeccccc-CCceeEEEEeccc-ccC-C-CcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHH
Confidence 11 1123 337799998 7999999988544 211 1 1112223566666666655542110 111222
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
.++. + +.+..--+.-.. .-|+++-+++... ...+...++ ++|+++.+. +.+.+|+.
T Consensus 282 ~~~~-------l-~~l~~~~v~~vR-G~Gl~~gve~~~~--------~~~i~~~~~-~~Gll~~~~------g~~vlr~~ 337 (364)
T PRK04013 282 AGEK-------F-IEIKGERVVTTR-GRGLMIGIVLKKP--------VGKYVEELQ-NRGYLVHTA------GQRVIRLL 337 (364)
T ss_pred HHHH-------H-HHhccCcceeee-eCcEEEEEEeCCc--------HHHHHHHHH-hCCcEEeeC------CCCEEEEe
Confidence 2221 1 122211111122 3367888888531 123555554 679999753 23679999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHh
Q 037587 410 FAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 410 ~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
... ++++++++++++|.+++.+
T Consensus 338 Ppl~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 338 PPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred CCcccCHHHHHHHHHHHHHHHHH
Confidence 877 7999999999999999865
No 319
>PRK07483 hypothetical protein; Provisional
Probab=99.58 E-value=7.8e-12 Score=126.59 Aligned_cols=360 Identities=13% Similarity=0.117 Sum_probs=193.3
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.....+||+..+ .+.+ ..|.+.+++.++.+. ...+....-..+....+|+.+.+...
T Consensus 22 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~-------------~~~~~~~~~~~~~~~~lae~L~~~~p- 87 (443)
T PRK07483 22 IYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDR-------------LAYAHTSFFTTEPAEALADRLVAAAP- 87 (443)
T ss_pred EEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHh-------------ccCccccccCCHHHHHHHHHHHHhCC-
Confidence 34455566788999765 3334 346677777665321 11011100123455566666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
-..+.++++++++|++..+++.... +| .+|+...-+|++....+....|- .+..++.
T Consensus 88 ---~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~ 164 (443)
T PRK07483 88 ---AGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSP 164 (443)
T ss_pred ---CCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCC
Confidence 1236899999999999999886421 23 46888888887764322111111 1112221
Q ss_pred CCCCCccc-----C--------HHHHHHHHHHHhhcCCceEEEEEeCC-CC-CCCC-CCCHHHHHHHHHHHhhCCeEEEE
Q 037587 164 SSSNGFRI-----T--------ISALENAYQQAQTLNLKVKGVLITNP-SN-PLGT-AMTHQELNHLINFSKSKRIHIVS 227 (464)
Q Consensus 164 ~~~~~~~~-----d--------~~~l~~~i~~~~~~~~~~~~vil~~P-~N-PtG~-~~s~~~l~~i~~~~~~~~~~lI~ 227 (464)
.. .|.. + ++.+++.+.. ....++.+|++. | .. -.|. ..+.+.++++.++|++||+++|.
T Consensus 165 ~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvivE-Piqg~~gG~~~~~~~fl~~lr~lc~~~gillI~ 239 (443)
T PRK07483 165 CY--AYREQRAGESDEAYGQRLADELEAKILE--LGPDTVAAFVAE-TVVGATAGAVPPVPGYFKRIREVCDRYGVLLIL 239 (443)
T ss_pred Cc--cccccccCCCHHHHHHHHHHHHHHHHHh--cCCCceEEEEEe-CcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEE
Confidence 10 1110 0 2344444431 112356666554 5 32 2354 55677899999999999999999
Q ss_pred eccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHh------c
Q 037587 228 DEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKM------S 300 (464)
Q Consensus 228 Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~------~ 300 (464)
||+..++ +..+ .+.. .+... ..+. +-+++|.+| .|+ .+|.+++++ .+.+.+... .
T Consensus 240 DEV~tGf--GRtG-~~~a-~~~~g---------v~PD---iv~~gK~l~-gG~~Pi~av~~~~-~i~~~~~~~~~~~~h~ 301 (443)
T PRK07483 240 DEVMCGM--GRTG-TLFA-CEEDG---------VAPD---LVTIAKGLG-AGYQPIGAVLASD-RIYDAIADGSGFFQHG 301 (443)
T ss_pred ecceeCc--ccCc-HHHH-HhhcC---------CCCC---eeeehhhhc-cCccccEEEEEcH-HHHHHHhcCCCccccC
Confidence 9999874 3221 1111 11110 1122 337899998 895 999999954 454444321 1
Q ss_pred ccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC-----
Q 037587 301 SFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN----- 372 (464)
Q Consensus 301 ~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~----- 372 (464)
..+..++++.+++.+.|+ +.++ .+..+++-+.+++. |.+.+++++.....-.-|+++-+++.......
T Consensus 302 ~T~~gnpl~~aaa~a~l~~i~~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~ 377 (443)
T PRK07483 302 HTYLGHATACAAALAVQRVIAEDGL-LANVRARGEQLRAR---LRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDP 377 (443)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCc
Confidence 122356666666665554 3332 22233333333222 32323333321111234567777774321100
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCC-CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSC-HCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f-~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.......++..++ ++||++.+.... .....+.+|+.... ++++++++++++|.+++.+.
T Consensus 378 ~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 378 ALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred hhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0011224556655 679999875311 11113579998876 79999999999999998754
No 320
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.58 E-value=9.3e-12 Score=126.10 Aligned_cols=353 Identities=12% Similarity=0.087 Sum_probs=191.1
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.++.+ .+..++...-..+....+|+.+.+...
T Consensus 41 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~-------------~l~~~~~~~~~~~~~~~la~~L~~~~p- 106 (445)
T PRK09221 41 MYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAA-------------TLDYAPAFQMGHPLAFELAERLAELAP- 106 (445)
T ss_pred cEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC-
Confidence 34445566788998765 2333 34666666665422 111111111113444556666654321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD-------P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
-..+.|+++++++|++..+++.... + ..+|+...-+|++....+....|. .+..+|.
T Consensus 107 ---~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~ 183 (445)
T PRK09221 107 ---GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPH 183 (445)
T ss_pred ---CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCC
Confidence 1236899999999999999886421 1 257888888887754321111111 1122221
Q ss_pred CC---CCCccc--------CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 164 SS---SNGFRI--------TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 164 ~~---~~~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.. ...+.. .++.+++.++.. ...++.+|++.-.....|... +.+.++++.++|+++|+++|+||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~ 261 (445)
T PRK09221 184 TLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVI 261 (445)
T ss_pred CccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 10 000111 124555555421 113566655553355667754 5667999999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hcc
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MSS 301 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~~ 301 (464)
.+ |+..+.. .. .+... ..+. +.+++|.++ .| +.+|.++++ +.+.+.+.. ...
T Consensus 262 tG--~GRtG~~-~~-~~~~g---------v~PD---i~~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~ 323 (445)
T PRK09221 262 TG--FGRLGAA-FA-AERFG---------VTPD---IITFAKGLT-NGAIPMGAVIAS-DEIYDAFMQGPEYAIEFFHGY 323 (445)
T ss_pred hC--CCcCchh-hH-HHhcC---------CCCC---EEEeccccc-cCcccceeeEEc-HHHHHhhccCccccccccccc
Confidence 76 4322101 11 11110 1122 348999997 66 689998884 445444321 111
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ee-cCCccEEEEEecCcccccCChhHHH
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-CL-KSNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~-~~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
.+..++++.+++.+.|+.-. + +...+..++.-+++.+.|+++ +.. +. .-.-|+++-+++........ ....
T Consensus 324 T~~~~pl~~aaa~a~L~~i~--~---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~-~~~~ 397 (445)
T PRK09221 324 TYSAHPVACAAGLATLDIYR--E---EDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPG-ARGY 397 (445)
T ss_pred CCCcCHHHHHHHHHHHHHHH--h---ccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEeccccccc-chHH
Confidence 22345666555555443211 0 112334444445555555543 211 11 11235666666643211111 1123
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++...++ ++||+++++ .+.+|++... ++++++++++++|++++.+
T Consensus 398 ~~~~~~~-~~Gv~~~~~-------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 398 EAFMKCF-EKGLLVRYT-------GDTIALSPPLIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred HHHHHHH-HCCeEEeec-------CCEEEEECCccCCHHHHHHHHHHHHHHHHh
Confidence 4566654 679999753 2469999766 7999999999999999865
No 321
>PRK06105 aminotransferase; Provisional
Probab=99.58 E-value=9.2e-12 Score=126.70 Aligned_cols=353 Identities=15% Similarity=0.109 Sum_probs=190.9
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.....+||+..+ .+.+ ..|.+.+++.++... ......+. ....+.+..+|+.+-+...
T Consensus 41 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------~~~~~~~~--~~~~~~~~~lae~L~~~~p-- 106 (460)
T PRK06105 41 YVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKK----------LPFYHTFS--HKSHGPVIDLAEKLVAMAP-- 106 (460)
T ss_pred EEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHh----------CCCeeccc--ccCCHHHHHHHHHHHHhCC--
Confidence 4444556788998765 3333 346666666664221 11011111 1124445556666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCCCChhhhcccCCCcE------------EEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA------D-P-GDAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~~ 164 (464)
..-+.++++++++|++..+++... . + ..+|+...-+|++....+....+.. +..++..
T Consensus 107 --~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p 184 (460)
T PRK06105 107 --VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP 184 (460)
T ss_pred --CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC
Confidence 223689999999999999998742 1 2 2578888888877543321111211 1112111
Q ss_pred CCCCccc-------------CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 165 SSNGFRI-------------TISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 165 ~~~~~~~-------------d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
+.+.. ..+.+++.+.. ....++.+|++---..-.|.. .|.+-++++.++|+++|+++|.||+
T Consensus 185 --~~~~~~~~~~~~~~~~~~~~~~le~~~~~--~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv 260 (460)
T PRK06105 185 --HYYRFGLPGESEEAFATRLANELEALILA--EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEV 260 (460)
T ss_pred --cccccccCCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEecc
Confidence 00110 12445555532 112356655554224555665 5788899999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh---------c
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM---------S 300 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~---------~ 300 (464)
+.++.-.+. . ... +.. + ..+. +.+|+|.+| .| +.+|.++++ +.+.+.+... .
T Consensus 261 ~tG~GRtG~--~-f~~-~~~-~--------v~PD---i~~~gK~lg-gG~~P~~av~~~-~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 261 ICGFGRTGN--M-FGC-ETF-G--------IKPD---ILVMSKQLS-SSYQPLSAVLMN-EKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred ccCCCcCch--h-hhH-Hhc-C--------CCCC---eeeeecccc-cCcccceEEEEc-HHHHHHHhcccccCcccccC
Confidence 976422222 1 111 111 1 1122 448999998 67 689999995 4455544321 1
Q ss_pred ccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC-C---
Q 037587 301 SFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN-T--- 373 (464)
Q Consensus 301 ~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~-~--- 373 (464)
..+..++++.+++.+.|+ +.++ .+..+++-+.+++. |.+ |+++++......-|+++-+++....... .
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l-~~~v~~~g~~l~~~---L~~-l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~ 397 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDL-VGNAAERGARLQAR---LRA-LADHPLVGEVRGVGLIAAVELVADKATKTPFEP 397 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH---HHH-hhcCCCeEEEEecceEEEEEEecCcccCCCCCc
Confidence 112355666665555443 3332 22233333333222 222 2333322222233577777774221110 0
Q ss_pred -hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 374 -FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 374 -~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
......+...+ .++||++.+. .+.+|++... +++++++++++++.+++++.
T Consensus 398 ~~~~a~~i~~~~-~~~Gvl~~~~-------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 398 PGKVGARANAAA-HEHGVISRAM-------GDTLAFCPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred hhHHHHHHHHHH-HHCCeEEEec-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 01122455555 4679999863 1369999876 69999999999999998764
No 322
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=1.3e-11 Score=125.58 Aligned_cols=359 Identities=14% Similarity=0.075 Sum_probs=190.8
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. ...+....-..+.+..+|+.+-.....
T Consensus 56 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~-------------~~~~~~~~~~~~~~~~la~~L~~~~p~- 121 (464)
T PRK06938 56 YVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLAD-------------ELPLHTLDLTTPVKDQFVQDLFASLPE- 121 (464)
T ss_pred EEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHh-------------hhcccccccCCHHHHHHHHHHHHhCcc-
Confidence 4445566778998655 3333 346677776664221 011111011234444555555432110
Q ss_pred CCCC-CCcEEEe-CChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecCCCC-
Q 037587 105 VKFD-PNKLVLT-AGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCSSSN- 167 (464)
Q Consensus 105 ~~~~-~~~i~it-~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~~~~- 167 (464)
... .+.++++ ++++|++..+++... ....+|+...-+|++....+....|. .+..++.+...
T Consensus 122 -~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~ 200 (464)
T PRK06938 122 -AFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYR 200 (464)
T ss_pred -cccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCcccc
Confidence 011 1356665 799999999988642 22367888888887754332111010 12223321100
Q ss_pred -Ccc--------cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 168 -GFR--------ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 168 -~~~--------~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
.+. .+++.+++.+.+......++.+||+ -| ..-.|.+ .|.+-++++.++|+++|+++|.||+..+ |
T Consensus 201 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~-EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tG--f 277 (464)
T PRK06938 201 CPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVIL-EVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSG--F 277 (464)
T ss_pred ccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC--C
Confidence 010 1245666666432111125666555 45 3344664 4688899999999999999999999987 4
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLS 314 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~ 314 (464)
+..+ .+.. .+. + +..+. +-+++|.+| .|+.+|.++++++ + +.+.. ....+..++++.+++.
T Consensus 278 GRtG-~~~a-~e~---~------gv~PD---iv~~gKglg-gG~PlsAv~~~~~-~-~~~~~~~~~~T~~gnpla~Aaa~ 340 (464)
T PRK06938 278 GRTG-KMFA-FEH---A------GIIPD---VVVLSKAIG-GSLPLAVVVYREW-L-DTWQPGAHAGTFRGNQMAMAAGS 340 (464)
T ss_pred CcCc-HHHH-HHh---c------CCCCC---EEEeecccc-CCCceEEEeehhH-h-hccCCCCCCCCCCcCHHHHHHHH
Confidence 3221 1111 111 1 01123 337799998 8999999998543 3 32221 1122235667766666
Q ss_pred HHcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-------C-ChhHHHHHHHH
Q 037587 315 RMLSD---KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-------N-TFEAEKELWKK 383 (464)
Q Consensus 315 ~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-------~-~~~~~~~l~~~ 383 (464)
+.|+- .+. .++.+++-+.+++. |.+..+++++......-|+++.+++...... . .......++..
T Consensus 341 a~L~~l~~~~l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (464)
T PRK06938 341 ATLRYIKEHRL-AEHAAAMGERLREH---LRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRE 416 (464)
T ss_pred HHHHHHHHhHH-HHHHHHHHHHHHHH---HHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHH
Confidence 66542 222 22222222223222 2222223343222234467888887432110 0 01112245555
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++ ++||++.++..+ .+.+|+.... +++++++++++++.+++.+
T Consensus 417 ~~-~~Gll~~~~g~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 417 CL-RRGLILELGGRH----GSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred HH-HCCeEEeecCCC----CCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 55 689999875322 3579998665 7999999999999999875
No 323
>PRK06149 hypothetical protein; Provisional
Probab=99.58 E-value=5.6e-12 Score=139.19 Aligned_cols=356 Identities=13% Similarity=0.158 Sum_probs=193.3
Q ss_pred CCCCCCCCceEEeeccccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
|..+.....+||+..+...+. .|.+.+++.++... .....+| ..+....+++.+.....
T Consensus 578 ~l~D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~----------l~~~~~~-----~~~~~~elae~L~~~~p---- 638 (972)
T PRK06149 578 HLFDMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSL----------LNTNSRF-----HYAAVAEFSERLAALAP---- 638 (972)
T ss_pred EEEeCCCCEEEECCCCccccCCCCHHHHHHHHHHHHh----------ccccccc-----cCHHHHHHHHHHHHhCC----
Confidence 333445667899986654443 46677666554221 1111122 12344455555543211
Q ss_pred CCCCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhcc-cC------CCc------EEEEEecCC--CCC
Q 037587 107 FDPNKLVLTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLK-WR------PGV------EIVPIHCSS--SNG 168 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~-~~------~g~------~~~~v~~~~--~~~ 168 (464)
-..+.++++++++|++..+++. +. ....|+..+-+|++....+. .. .+. .+..++... ...
T Consensus 639 ~~~~~v~f~~SGsEA~e~AlklAr~~t-gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~ 717 (972)
T PRK06149 639 DGLDTVFLVNSGSEANDLAIRLAWAAS-GRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGR 717 (972)
T ss_pred CCcCEEEEeCCchHHHHHHHHHHHHhc-CCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCc
Confidence 1236899999999999999884 33 23568888878876432210 00 000 012222111 011
Q ss_pred cc-cC-----HHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 169 FR-IT-----ISALENAYQQAQTLNLKVKGVLITNP--SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 169 ~~-~d-----~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
|. .+ .+.+++.++.....+.++.+||+ -| ++-.....|.+-++++.++|+++|+++|.||++.+ |+..+
T Consensus 718 ~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~-Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tG--fGRtG 794 (972)
T PRK06149 718 FRGADSAADYVRDVVAQLEELDASGRGLAGFIC-EPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVG--YGRLG 794 (972)
T ss_pred CCCcccHHHHHHHHHHHHHHHhhcCCceEEEEE-cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhc--CCccC
Confidence 21 11 24455555443333446665555 45 34433556788899999999999999999999976 43321
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc---CCCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF---GLVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l 317 (464)
..+...-.+ + ..+.+ -+|+|.+| .|+.+|.++++ +.+.+.+.....+ +..++++.+++.+.|
T Consensus 795 ~~~~a~e~~--g--------v~PDi---vt~gK~lg-~G~Pl~av~~~-~~i~~~~~~~~~~~sT~~gnP~~~aaala~L 859 (972)
T PRK06149 795 HYFWGFEQQ--G--------VVPDI---ITMAKGMG-NGHPLGAVITR-REIAEALEAEGYFFSSTGGSPVSCRIGMAVL 859 (972)
T ss_pred ccchhhhhc--C--------CCCCE---EEeccccc-CCeeeEEEEEc-HHHHhhhccCCcccCCCCCCHHHHHHHHHHH
Confidence 122221111 0 11222 38999998 89999999994 4555554321111 235666666666655
Q ss_pred C---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEE
Q 037587 318 S---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 318 ~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v 392 (464)
+ +.++ .+..+++-+.+++. |.+...++++....-.-|+|+-+++...... ........++..++ ++||++
T Consensus 860 ~~i~~e~l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~ 934 (972)
T PRK06149 860 DVLREEKL-QENARRVGDHLKAR---LEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIM 934 (972)
T ss_pred HHHHhcCH-HHHHHHHHHHHHHH---HHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEE
Confidence 4 2222 22222222222222 2222223333222223467888887421111 11122334666665 679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.+... ..+.+||.... ++++++++++++|.+++.+
T Consensus 935 ~~~g~----~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 935 QPTGD----HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred eecCC----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 87532 24679988765 6999999999999999864
No 324
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.1e-11 Score=126.05 Aligned_cols=349 Identities=13% Similarity=0.108 Sum_probs=187.1
Q ss_pred CCCCCceEEeecc-cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 32 LHNPSGIIQMGLA-ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 32 ~~~~~~~i~l~~~-~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
+.+...+||+..+ ...+ ..|.+.+++.++.+. +. +....-..+....+++.+.+... -.
T Consensus 68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~-------------~~-~~~~~~~~~~~~~lae~L~~~~p----~~ 129 (459)
T PRK06082 68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAK-------------LP-FSPRRFTNETAIECAEKLTEIAG----GE 129 (459)
T ss_pred ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHh-------------CC-CccCccCCHHHHHHHHHHHHhCC----CC
Confidence 3455678898633 2223 346677766664221 11 11111124555666666654322 12
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcE------------EEEEecCC--CCCcc-c
Q 037587 109 PNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHCSS--SNGFR-I 171 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~~~--~~~~~-~ 171 (464)
.+.+++++++++++..+++... ....+|+...-+|++....+....|.. +..+|... ...|. .
T Consensus 130 ~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (459)
T PRK06082 130 LNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA 209 (459)
T ss_pred CCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh
Confidence 3689999999999999987642 223678888888877542221111211 11222110 00011 0
Q ss_pred C------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 172 T------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 172 d------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
+ ++.+++.+++ ..++.+|++ -| .+..+...+.+.++++.++|+++|+++|.||+..+ |+..+..+
T Consensus 210 ~~~~~~~~~~l~~~i~~----~~~vAavIv-EPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG--~GRtG~~f- 281 (459)
T PRK06082 210 DGSDVHYADYLEYVIEK----EGGIGAFIA-EAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNG--MGRTGEWF- 281 (459)
T ss_pred hHHHHHHHHHHHHHHhc----CCCEEEEEE-CCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhC--CCccchhh-
Confidence 1 2345555532 235655555 45 44334567778899999999999999999999986 43221011
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH-hc-ccCCCChHHHHHHHHHcC---
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK-MS-SFGLVSSQTQYLLSRMLS--- 318 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~-~~-~~~~~s~~~q~~~~~~l~--- 318 (464)
. .+.. + ..+.++ +|+|.+| .| +.+|.++++++ +...... .. ..+..++++.+++.+.|+
T Consensus 282 a-~e~~-g--------v~PDiv---~~gKgl~-gG~~P~~av~~~~~-i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 346 (459)
T PRK06082 282 T-HQAY-G--------IEPDIL---CIGKGLG-GGLVPIAAMITKDK-YNTAAQISLGHYTHEKSPLGCAAALATIEVIE 346 (459)
T ss_pred H-hHhh-C--------CCCCEE---Eeccccc-CCCCcceEEEEcHH-HHhhccCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 1 1111 1 112333 5899998 77 59999998543 4333211 11 112356666666555544
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+.++ .++.+++-+.+++. |.+...++++....-.-|+++.+++...... ........+...++ ++||++.+..
T Consensus 347 ~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~ 421 (459)
T PRK06082 347 QEGL-LEKVKADSQFMRER---LLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVSQ 421 (459)
T ss_pred hcCH-HHHHHHHHHHHHHH---HHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEecC
Confidence 2222 22233322222222 2222222333222223456777877532111 11111224555554 6799997631
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+.+|++... +++++++++++++.+++.+.
T Consensus 422 ------~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~ 452 (459)
T PRK06082 422 ------GNVIQLSPPLIITREELTQALAILEEAIAKI 452 (459)
T ss_pred ------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 3579999765 69999999999999998764
No 325
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=1.2e-11 Score=125.92 Aligned_cols=356 Identities=12% Similarity=0.073 Sum_probs=194.4
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. +...... .-..+.+..+|+.+.+.....
T Consensus 57 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~----------l~~~~~~---~~~~~~~~~lae~L~~~~p~~ 123 (472)
T PRK08742 57 WLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGE----------LEQVMLA---GFTHEPAVQLAEQLLAIAPRQ 123 (472)
T ss_pred EEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHh----------CCCcccc---ccCCHHHHHHHHHHHHhCCCc
Confidence 4445556778998765 3333 346676776664221 1111111 111344566666665432100
Q ss_pred C-CCCCCcEEEeCChHHHHHHHHHHhcC-------C-CCeEEEcCCCCCChhhhcccCCCcE------------EEEEec
Q 037587 105 V-KFDPNKLVLTAGSTAANETLMFCLAD-------P-GDAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHC 163 (464)
Q Consensus 105 ~-~~~~~~i~it~G~~~al~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~ 163 (464)
. .-..+.+++++++++++..+++.... + ..+|+...-+|++....+....|.. +..+|.
T Consensus 124 ~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~ 203 (472)
T PRK08742 124 DGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred ccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCC
Confidence 0 00135899999999999999887521 2 2679999988887653322211211 122222
Q ss_pred CCCC--Cccc--------CHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 164 SSSN--GFRI--------TISALENAYQQAQTLNLKVKGVLITNP--SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 164 ~~~~--~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
.... .+.. +++.+++.+.. ...++.+|++. | .+-.|. ..|.+.++++.++|+++|+++|.||+
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~E-Pviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV 279 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILE-PRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI 279 (472)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEc-cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 1000 0011 13455555532 23466665554 5 455576 45778899999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHH--------hcc
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATK--------MSS 301 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~--------~~~ 301 (464)
..++...+. . ... +.. + ..+.++ +++|.+| .|+ .+|.++++ +.+.+.+.. ...
T Consensus 280 ~TGfGRtG~--~-~a~-e~~-g--------v~PDiv---~~gKgl~-gG~~Plaav~~~-~ei~~~~~~~~~~~~~~h~~ 341 (472)
T PRK08742 280 ATGFGRTGT--L-FAC-EQA-G--------VMPDLL---CLSKGLT-GGFLPLSAVLAT-QQLYDAFLDDSRERAFLHSH 341 (472)
T ss_pred hhCCCCCcc--c-hHH-Hhc-C--------CCCCEE---EEccccc-CCCCCcceeecc-HHHHHHhhccCccCccCcCC
Confidence 987422222 1 111 111 0 112333 6799998 884 99999984 445444321 111
Q ss_pred cCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCCh----
Q 037587 302 FGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTF---- 374 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~---- 374 (464)
.+..++++.+++.+.|+ +.++ .+..+++-+.+ ..+.+.+.++.+-...-.-|+++-+++.........
T Consensus 342 T~~gnpl~~Aaa~a~L~~i~~~~l-~~~~~~~g~~l----~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~ 416 (472)
T PRK08742 342 SYTGNPLACAAALATLDIFADDDV-IARNQPTAARM----TQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPA 416 (472)
T ss_pred CCCccHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHH----HHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCch
Confidence 12346666666655554 2222 22222222222 233334444432111223467888887532111100
Q ss_pred -hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 375 -EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 -~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.....+...++ ++||++.+. .+.+||.... ++++++++++++|.+++++.
T Consensus 417 ~~~~~~~~~~~~-~~Gll~~~~-------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 417 ARVGLHAYRAAL-ARGVVLRPL-------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred hHHHHHHHHHHH-HCCeEEEec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11123455554 679999863 1479999877 79999999999999998753
No 326
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.57 E-value=5.4e-12 Score=126.94 Aligned_cols=346 Identities=14% Similarity=0.088 Sum_probs=190.8
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ .........-..+.+..+|+.+.+...
T Consensus 36 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p-- 100 (428)
T PRK07986 36 ELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID-------------AMSHVMFGGITHPPAIELCRKLVAMTP-- 100 (428)
T ss_pred EEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHh-------------hcCCccccccCCHHHHHHHHHHHhhCC--
Confidence 4444556778998764 3333 34667777766422 111110001123455666666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------CCCeEEEcCCCCCChhhhcccCCCc-------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------PGDAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~gd~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~~ 164 (464)
...+.++++++++|++..+++.... +..+|+....+|++....+....+- .++.++..
T Consensus 101 --~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p 178 (428)
T PRK07986 101 --QPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAP 178 (428)
T ss_pred --CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCC
Confidence 2236899999999999999886431 2367999999987754222111111 01122211
Q ss_pred CC---CCc-ccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 165 SS---NGF-RITISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 165 ~~---~~~-~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
.. ..| .-|++.+++.++. .+.++.+|++... ..-.|. ..+++.+++|.++|+++|+++|+||++.+ |+.
T Consensus 179 ~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG--~Gr 253 (428)
T PRK07986 179 QSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATG--FGR 253 (428)
T ss_pred CcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccC--Ccc
Confidence 00 001 1245667766643 2335655555431 444565 34668899999999999999999999976 432
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-------cccCCCChHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-------SSFGLVSSQTQ 310 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-------~~~~~~s~~~q 310 (464)
.+..+ .. +.. + ..+.++ +|+|.+| .| +.+|.++++ +.+.+.+... ...+..++++.
T Consensus 254 tG~~f-a~-~~~-g--------v~PDi~---t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 254 TGKLF-AC-EHA-G--------IAPDIL---CLGKALT-GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLAC 317 (428)
T ss_pred CCCee-ee-ccc-C--------CCCCEE---Eechhhh-CCcccCcchhch-HHHHHHhhcCCCCccccCCCCCcCHHHH
Confidence 21111 10 111 0 112222 6999997 78 588888884 4555555331 11123456666
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-C---CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-G---IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIF 386 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g---~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~ 386 (464)
+++.+.|+--+- . ..++.++++-+++.+.|+++ . +.-.. .-|+++-+.+.... ....+...+ .
T Consensus 318 aaa~a~L~~i~~-~----~~~~~~~~~g~~l~~~l~~l~~~~~i~~vR-g~Gl~~~ve~~~~~------~~~~~~~~l-~ 384 (428)
T PRK07986 318 AVANASLSLLES-G----DWQQQVAAIEAQLREELAPLRDAPMVADVR-VLGAIGVVETTRPV------NMAALQRFF-V 384 (428)
T ss_pred HHHHHHHHHHHh-C----CHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccceEEEEEeCCcc------cHHHHHHHH-H
Confidence 665555442110 0 11223333334444444432 1 11112 23567777775321 122355555 4
Q ss_pred hcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 387 EVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 387 ~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++||++.+.. +.+|+.... ++++++++++++|.+++++.
T Consensus 385 ~~Gl~~~~~g-------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 424 (428)
T PRK07986 385 EQGVWIRPFG-------KLIYLMPPYIILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred HCCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 7899998641 379998766 79999999999999998653
No 327
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=8.5e-12 Score=125.69 Aligned_cols=346 Identities=13% Similarity=0.087 Sum_probs=191.5
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.++.+. +..+....-..+.+..+|+.+-+..
T Consensus 36 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~-------------~~~~~~~~~~~~~~~~lae~L~~~~-- 100 (429)
T PRK06173 36 VMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAK-------------MSHIMFGGFTHEPAVELAQKLLEIL-- 100 (429)
T ss_pred eEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHh-------------cCCccccccCCHHHHHHHHHHHhhC--
Confidence 34555567788998764 2232 346666666664221 1111100011344455555554321
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc-------------EEEEEe
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIH 162 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~ 162 (464)
+...+.+++++++++++..+++.... +| .+|+....+|++....+....+- .+..+|
T Consensus 101 --p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~ 178 (429)
T PRK06173 101 --PPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLP 178 (429)
T ss_pred --CCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeC
Confidence 12246899999999999999886431 23 57888888888743221111010 011222
Q ss_pred cCCCCCcc-----cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 163 CSSSNGFR-----ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 163 ~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
... ..+. -+++.+++.+.. .+.++.+|++.-. ..-.|.. .|.+.++++.++|+++|+++|+||++.+
T Consensus 179 ~p~-~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG-- 252 (429)
T PRK06173 179 QPS-IKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATG-- 252 (429)
T ss_pred CCC-cccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcC--
Confidence 110 0010 124555666542 2346776666531 4555765 6788899999999999999999999976
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH-------hcccCCCCh
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK-------MSSFGLVSS 307 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~-------~~~~~~~s~ 307 (464)
|+..+..+ . .+.. + ..+.++ +|+|.+| .| +.+|.++++ +.+.+.+.. ....+..++
T Consensus 253 ~GrtG~~~-a-~~~~-g--------v~PDiv---~~gK~l~-gG~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~T~~g~p 316 (429)
T PRK06173 253 FGRTGKLF-A-LEHA-G--------VVPDIM---CIGKALT-GGYLTLSATITT-EAIAQTICSGEAKCFMHGPTFMANP 316 (429)
T ss_pred CCcCCcch-H-HHhc-C--------CCCCEE---Eeehhhh-CCccccceEEec-HHHHHHHhcCCCCccccCCCCCcCH
Confidence 43321111 1 1111 1 112222 4999997 78 478888874 445444431 111122455
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--CCccEEEEEecCcccccCChhHHHHHHHHH
Q 037587 308 QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK--SNAGLFCWVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~~~g~f~~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
++.+++.+.|+--. + +..++.++++-++|.+.|++. +.+... -..|+++-+.+..... ...+...+
T Consensus 317 ~~~aaa~a~l~~i~---~--~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~------~~~i~~~l 385 (429)
T PRK06173 317 LACAIAAESIRLLL---E--SPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVN------MATLQPRF 385 (429)
T ss_pred HHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCccc------HHHHHHHH
Confidence 66665555544211 0 012333444445555555543 333221 1235677777753211 12355555
Q ss_pred HHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 385 IFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.++||++.+.. +.+||.... ++++++++++++|.+++.+
T Consensus 386 -~e~Gi~v~~~g-------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 386 -VEHGIWVRPFG-------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred -HHCCeEEEecC-------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 46799997641 379999877 7999999999999999875
No 328
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=1.9e-11 Score=124.41 Aligned_cols=351 Identities=12% Similarity=0.086 Sum_probs=191.9
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++.+. +.....+ .-..+.+..+|+.+.+...
T Consensus 49 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~----------l~~~~~~---~~~~~~~~~lae~L~~~~p-- 113 (460)
T PRK06916 49 KLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNK----------IAHSTLL---GLANVPSILLAEKLIEVVP-- 113 (460)
T ss_pred EEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHh----------CCCcccc---ccCCHHHHHHHHHHHHhCC--
Confidence 4444556778998654 3333 456677777665321 1111111 0113444556666554321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
...+.+++++++++++..+++.... +| .+|+...-+|++....+....|. .+..+|..
T Consensus 114 --~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p 191 (460)
T PRK06916 114 --EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYP 191 (460)
T ss_pred --CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCC
Confidence 1236899999999999999886431 33 67899998888754322111111 11222211
Q ss_pred C--CCCcc--------cCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 S--SNGFR--------ITISALENAYQQAQTLNLKVKGVLITN-PSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~--~~~~~--------~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. ...+. -+++.+++.+++ .+.++.+|++.- ...-.|.+ .|.+.++++.++|+++|+++|.||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T 268 (460)
T PRK06916 192 YTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT 268 (460)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh
Confidence 0 00011 124455555542 234677666653 24555765 588889999999999999999999997
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hccc
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MSSF 302 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~~~ 302 (464)
+ |+..+ .... .+.. + ..+.+ -+++|.+| .| +.+|.+++++ .+.+.+.. ....
T Consensus 269 G--~GRtG-~~~a-~~~~-g--------v~PDi---v~~gK~l~-gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~~~~T 330 (460)
T PRK06916 269 G--FGRTG-KMFA-CEHE-N--------VTPDI---MTAGKGLT-GGYLPIAITVTTD-EIYNAFYGDYEEQKTFFHGHS 330 (460)
T ss_pred C--CCcCc-hhhH-HHhc-C--------CCCCe---eeeehhhh-cCccccceeeecH-HHHHHhhccccccCccccCCC
Confidence 6 43221 1111 1111 0 11223 37899998 88 5999999954 45443321 1111
Q ss_pred CCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHh---CCCeeecCCccEEEEEecCcccccC----
Q 037587 303 GLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKV---AGIRCLKSNAGLFCWVDMRHLLVSN---- 372 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~g~~~~~~~~g~f~~~~l~~~~~~~---- 372 (464)
+..++++.+++.+.|+ +.++ .+.+++.-+++.+.|++ +........-|+++-+++.......
T Consensus 331 ~~gnpl~~aaa~a~l~~l~~~~l--------~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~ 402 (460)
T PRK06916 331 YTGNPLGCAVALANLELYEKTNL--------IEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFE 402 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCC
Confidence 2246666666655553 2222 22233333334444433 2211111233567777764321110
Q ss_pred -ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 373 -TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 373 -~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.......+...++ ++||++.|.. +.+|+..+. ++++++++++++|.+++++..
T Consensus 403 ~~~~~~~~i~~~~~-~~Gvl~~~~g-------~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 403 WTERVGVQVCKRSR-ELGMLTRPLG-------NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred chhhHHHHHHHHHH-HCCeEEEecC-------CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 0011124555554 6799998641 368888665 799999999999999997643
No 329
>PRK12403 putative aminotransferase; Provisional
Probab=99.56 E-value=2.8e-11 Score=123.21 Aligned_cols=355 Identities=16% Similarity=0.136 Sum_probs=184.3
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. +.....+ ..+..+....+++.+.+..+
T Consensus 47 ~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~----------~~~~~~~--~~~~~~~~~~lae~L~~~~p-- 112 (460)
T PRK12403 47 HLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQ----------LPYYNMF--FHTTHPAVIELSELLFSLLP-- 112 (460)
T ss_pred EEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHh----------CCCeecc--cccCCHHHHHHHHHHHHhCC--
Confidence 4444556678997654 1223 346666666664221 1111111 11234455555665544321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-------CCCC-eEEEcCCCCCChhhhcccCCCcE-----------EEEEecCC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-------DPGD-AFLLPTPYYPGFDRDLKWRPGVE-----------IVPIHCSS 165 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-------~~gd-~Vlv~~p~y~~~~~~~~~~~g~~-----------~~~v~~~~ 165 (464)
-..+.+++++++++++..+++... ++++ .|+...-+|++.........|.+ +..+|...
T Consensus 113 --~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~ 190 (460)
T PRK12403 113 --GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPY 190 (460)
T ss_pred --CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCc
Confidence 123689999999999999998763 2333 35555667766432221111211 22222110
Q ss_pred --CCCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 166 --SNGFRIT--------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 166 --~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
...+... .+.+++.+.+. ...++.+|++ -| ..-.|.. .+.+-++++.++|+++|+++|.||++.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~-Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tG 267 (460)
T PRK12403 191 WYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVA-EPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGG 267 (460)
T ss_pred ccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEE-ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 0001111 23444444321 1235555555 45 4455765 4677899999999999999999999976
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHh------cccCCCC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKM------SSFGLVS 306 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~------~~~~~~s 306 (464)
|+..+..+ .. +.. + ..+.++ +++|.+| .|+ .+|.++++ +.+.+.+... ...+..+
T Consensus 268 --fGRtG~~~-a~-e~~-g--------v~PDiv---~~gK~lg-gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~gn 329 (460)
T PRK12403 268 --FGRTGEWF-AH-EHF-G--------FEPDTL---SIAKGLT-SGYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYSGH 329 (460)
T ss_pred --CCcCchhh-hh-hhc-C--------CCCCeE---EEccccc-ccccceEEEEEC-HHHHHHHhcCCCccccCCCCCCC
Confidence 43321011 10 111 0 112233 5999998 784 99988884 4555544321 1112245
Q ss_pred hHHHHHHHHHcC---CchhhHHHHH-HHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-CChh----HH
Q 037587 307 SQTQYLLSRMLS---DKKFTCNYMK-ENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-NTFE----AE 377 (464)
Q Consensus 307 ~~~q~~~~~~l~---~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-~~~~----~~ 377 (464)
+++.+++.+.|+ +.++ .+... ++-+.++ +.|.+...++++......-|+++.+++...... .... ..
T Consensus 330 Pl~~Aaala~L~~i~~~~l-~~~~~~~~g~~l~---~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK12403 330 PVAAAVAIANLKALRDEGV-VTRVKDDTGPYLQ---RCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLA 405 (460)
T ss_pred HHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH---HHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHH
Confidence 666666655554 2222 11121 2222222 223333333443222224467777877432111 1000 01
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..+...+ .++||++.+.. +.+|++... +++++++++++++.+++++.
T Consensus 406 ~~~~~~~-~~~Gll~~~~~-------~~~~l~Ppl~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 406 WRCRTIG-FEEGVIIRSTL-------GRMIMAPALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred HHHHHHH-HhCCEEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1223333 46799997531 348888876 69999999999999999765
No 330
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.56 E-value=2.5e-11 Score=123.58 Aligned_cols=353 Identities=12% Similarity=0.081 Sum_probs=192.7
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
.|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ........-..+.+..+|+.+.+..
T Consensus 39 ~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~-------------l~~~~~~~~~~~~~~~lae~L~~~~-- 103 (466)
T PRK07030 39 VWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQ-------------LEHVILAGFSHEPVIELSERLVKIT-- 103 (466)
T ss_pred cEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHh-------------cCCccccccCCHHHHHHHHHHHHhC--
Confidence 34445566778998755 2223 346666666664221 1111111112455566666665432
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA------D-P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~ 163 (464)
+...+.++++++++|++..+++... . + ..+|+...-+|++....+....|. .+..+|.
T Consensus 104 --p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~ 181 (466)
T PRK07030 104 --PPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPS 181 (466)
T ss_pred --CCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCC
Confidence 1123689999999999999988752 1 2 357888888888754332111111 1122221
Q ss_pred CCC--CCccc--------CHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 164 SSS--NGFRI--------TISALENAYQQAQTLNLKVKGVLITNP--SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 164 ~~~--~~~~~--------d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
... ..+.. +++.+++.+.+ .+.++.+|++. | ..-.|. ..+.+.++++.++|+++|+++|.||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~E-P~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV 257 (466)
T PRK07030 182 PDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVE-PLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEI 257 (466)
T ss_pred CCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEe-cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh
Confidence 110 00111 23445555542 23467666655 4 344565 45667899999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hc
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MS 300 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~ 300 (464)
..++.-.+. . .. .+.. + ..+.++ +|+|.+| .| +.+|.++++ +.+.+.+.. ..
T Consensus 258 ~TGfGRtG~--~-~a-~~~~-g--------v~PDiv---~~gKgl~-gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~h~ 319 (466)
T PRK07030 258 AVGFGRTGT--M-FA-CEQA-G--------IRPDFL---CLSKALT-GGYLPLAAVLTT-DTVYQAFYDDYPTLRAFLHS 319 (466)
T ss_pred hhCcCcccc--c-hH-HHhc-C--------CCCCEE---eeehhcc-CCcccceEEEec-HHHHHHHhcccccccccccC
Confidence 987422222 1 11 1111 0 112333 6799998 89 599999984 445444421 11
Q ss_pred ccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC-----
Q 037587 301 SFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN----- 372 (464)
Q Consensus 301 ~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~----- 372 (464)
..+..++++.+++.+.|+ +.++ .++.+++-+.+++. |. .|.++......-.-|+++.+++.......
T Consensus 320 ~T~~gnpla~aaa~a~L~~i~~~~l-~~~~~~~G~~l~~~---L~-~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~ 394 (466)
T PRK07030 320 HSYTGNPLACAAALATLDIFEQDNV-IENNRALARRMAEA---TA-HLADHPHVAEVRQTGMILAIEMVQDKASKTPYPW 394 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HH-HHhcCCCEEEeEeceeEEEEEeccCccccccCcc
Confidence 112356677666666554 2222 22222222222222 21 22223221111234677878774321110
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.......+...++ ++||++.+.. +.+|+.... ++++++++++++|.+++++.
T Consensus 395 ~~~~~~~i~~~~~-~~Gvl~~~~g-------~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 395 QERRGLKVYQHAL-ERGALLRPLG-------SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred hhHHHHHHHHHHH-HCCeEEEecC-------CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 0011124555554 6799997631 368988665 79999999999999999886
No 331
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.55 E-value=6.3e-12 Score=122.79 Aligned_cols=354 Identities=14% Similarity=0.166 Sum_probs=219.4
Q ss_pred CCceEEeecccccc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.+-+|||-++.--- |.+...+++... -..|.......+|.+.+++.++ .+.++
T Consensus 40 ~dV~IDLrSDTgT~apS~~m~aAM~~G----------------DD~Y~gdpSv~~Lee~vael~G----------~E~al 93 (467)
T TIGR02617 40 EDVFIDLLTDSGTGAVTQSMQAAMMRG----------------DEAYSGSRSYYALAESVKNIFG----------YQYTI 93 (467)
T ss_pred CCeEEECccCCCCCCCCHHHHHHHHcC----------------CcccccCchHHHHHHHHHHHhC----------CceEE
Confidence 44568998876552 555555554431 1357766677999999999986 34578
Q ss_pred EeCChHHHHHHHHHHhcC-CCCeEEEcCC-------CCCC-hhhhcccCCCcEEEEEecC--------CCCCcccCHHHH
Q 037587 114 LTAGSTAANETLMFCLAD-PGDAFLLPTP-------YYPG-FDRDLKWRPGVEIVPIHCS--------SSNGFRITISAL 176 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~-~gd~Vlv~~p-------~y~~-~~~~~~~~~g~~~~~v~~~--------~~~~~~~d~~~l 176 (464)
.|..++.+-.+++..+++ +|+.+.+..+ .|.. ....+... |+.++.++.+ ......+|++.+
T Consensus 94 pthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~-G~~~~~l~~~ea~~~~~~~~fkG~~dl~~l 172 (467)
T TIGR02617 94 PTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQIN-GCTARNVYTKEAFDTGVRYDFKGNFDLEGL 172 (467)
T ss_pred ECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHc-CceeecccchhhcccccCCCCCCCcCHHHH
Confidence 888889999999999998 6777775443 2221 12234444 8887776432 112346899999
Q ss_pred HHHHHHHhhcCCceEEEEEeCCCC-CCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc--cccC---CCCCCccchhhhh
Q 037587 177 ENAYQQAQTLNLKVKGVLITNPSN-PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG--TVFD---SPSSSFISIMEAV 250 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P~N-PtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~--~~~~---~~~~~~~~~~~l~ 250 (464)
++.|++... .++..+.+.--+| --|+.+|.+.++++.++|++||+.++.|.+-.- -+|- .....-.++.++.
T Consensus 173 e~~I~~~g~--~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~ 250 (467)
T TIGR02617 173 ERGIEEVGP--NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQIT 250 (467)
T ss_pred HHHHhhcCC--CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHH
Confidence 999975311 1222222211123 357899999999999999999999999985531 0110 0000113555554
Q ss_pred hccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecCH---HHHHHHHHh-------cccCCCChHHHHHHHHHcCC
Q 037587 251 MDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNNE---RVVSAATKM-------SSFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 251 ~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~~---~~~~~~~~~-------~~~~~~s~~~q~~~~~~l~~ 319 (464)
.++ ......+..|+||.+|.| | |+++++++ .+.+..+.. .+++..+.-...+++.-|.+
T Consensus 251 rE~-------~~~aDsvt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 251 RET-------YKYADMLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred HHh-------hccCCEEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 322 112334567999999876 5 67777777 333333322 23344555555565544554
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccc---ccCChhHHHHHHHHHHHhcCeEEe-CC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLL---VSNTFEAEKELWKKIIFEVGLNIS-PG 395 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~---~~~~~~~~~~l~~~ll~~~gI~v~-pg 395 (464)
.- -..+++.+.. ..++|.+.|.+.|+++.. .||.-++++....+ .... .....++..|..+.||--. -|
T Consensus 321 ~~-~~~yl~~ri~----qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~-fpa~al~~~ly~~~GiR~~e~G 393 (467)
T TIGR02617 321 GM-NLDWLAYRIN----QVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQ-FPAHALACELYKVAGIRAVEIG 393 (467)
T ss_pred cc-cHHHHHHHHH----HHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhh-CcHHHHHHHHHHHcCcceEeec
Confidence 31 1344554443 346678888889999988 78877888754431 1112 2334678888888898743 23
Q ss_pred CC-CCCC---------CCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 396 SS-CHCN---------EPGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 396 ~~-f~~~---------~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+. ++.+ .-..+|+++.. -|.+.++...++|..+.++...
T Consensus 394 ~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 394 SLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred ceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 32 1110 02479999976 4889999999999998877663
No 332
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=1.1e-11 Score=124.66 Aligned_cols=343 Identities=11% Similarity=0.117 Sum_probs=186.2
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++.+. ... ..+.. -..+....+|+.+.+...
T Consensus 33 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~----------~~~-~~~~~--~~~~~~~~lae~L~~~~p-- 97 (422)
T PRK05630 33 FLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDT----------MSH-VMFGG--LTHEPAIKLTRKLLNLTD-- 97 (422)
T ss_pred EEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHh----------CCC-cccCC--cCCHHHHHHHHHHHhhCC--
Confidence 4555567788998764 3333 346677776664321 111 11110 113444556666554321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCc-------------EEEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~ 163 (464)
-..+.++++++++|++..+++.... ++ .+|+....+|++....+....+- .+..+|.
T Consensus 98 --~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 175 (422)
T PRK05630 98 --NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPA 175 (422)
T ss_pred --CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCC
Confidence 1236899999999999999886421 22 57898888888753222111110 1122222
Q ss_pred CCCCCcccCHHHH---HHHHHHHhhcCCceEEEEEeC-CCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 164 SSSNGFRITISAL---ENAYQQAQTLNLKVKGVLITN-PSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 164 ~~~~~~~~d~~~l---~~~i~~~~~~~~~~~~vil~~-P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
... ...+.+.+ .+.+++... .++.+|++.- +..-.|.. .+.+.++++.++|+++|+++|.||++.+ |+.
T Consensus 176 ~~~--~~~~~~~~~~~~~~~~~~~~--~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG--~Gr 249 (422)
T PRK05630 176 PPV--RGSSPQEISEYLRSLELLID--ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATG--FGR 249 (422)
T ss_pred Ccc--cCCChHHHHHHHHHHHHHHh--hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeC--CCc
Confidence 110 01111122 222221111 2676666653 14556764 4667899999999999999999999976 432
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--------cccCCCChHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--------SSFGLVSSQT 309 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~ 309 (464)
.+ .... .+.. + ..+.++ +|+|.++ .| ..+|.++++ +.+.+.+... ...+..+++.
T Consensus 250 tG-~~~a-~~~~-g--------v~PDi~---t~gK~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla 313 (422)
T PRK05630 250 TG-ELFA-TLAA-G--------VTPDIM---CVGKALT-GGFMSFAATLCT-DKVAQLISTPNGGGALMHGPTFMANPLA 313 (422)
T ss_pred Cc-hhhH-HHhc-C--------CCCCee---eeechhh-cCccccceeecc-HHHHHHHhccCCCCccccCCCCcCCHHH
Confidence 21 1111 1111 1 112222 8899986 67 589999984 4455544321 1122355566
Q ss_pred HHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHH
Q 037587 310 QYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 310 q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
.+++.+.|+ +.++ .+ .+++.-+++.+.|+.+ .+.-... -|+++-+++..... ...+..
T Consensus 314 ~aaa~aaL~~l~~~~~-~~-------~~~~~g~~l~~~L~~l~~~~~v~~vRg-~Gl~~~ie~~~~~~------~~~~~~ 378 (422)
T PRK05630 314 CAVAHASLEIIETGMW-RK-------QVKRIEAELIAGLSPLAHLPGVADVRV-LGAIGVVEMEQPVD------MEEATQ 378 (422)
T ss_pred HHHHHHHHHHHHhCcH-HH-------HHHHHHHHHHHHHHHhhcCCCeeeeec-cccEEEEEECCccc------HHHHHH
Confidence 555555443 2222 12 2223333334433322 1111122 35688788753211 123555
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+ .++||++.+. .+.+||.... ++++++++++++|+++++..|
T Consensus 379 ~~-~~~Gl~~~~~-------g~~l~~~PpL~it~~~i~~~~~~l~~al~~~~ 422 (422)
T PRK05630 379 AA-VDHGVWLRPF-------GRLVYVMPPYITTSEQIAQICAALAAAVKAKQ 422 (422)
T ss_pred HH-HHCCeEEEec-------CCEEEEECCccCCHHHHHHHHHHHHHHHhccC
Confidence 55 4679999763 1478998876 799999999999999987643
No 333
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.55 E-value=9.7e-13 Score=136.90 Aligned_cols=169 Identities=14% Similarity=0.132 Sum_probs=118.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+..+.+|+.++ .....+++||+|.++..++.+++.+||.||++..||.+..+++... |+++++++...
T Consensus 197 i~eAe~~AA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLils-ga~PVYl~P~r 266 (714)
T PRK15400 197 HKEAEEYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMS-DVTPIYFRPTR 266 (714)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeEEEecccc
Confidence 3566666666664 3456889999999999999999999999999999999888877766 99999987543
Q ss_pred CCCcc----cC-----HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-
Q 037587 166 SNGFR----IT-----ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV- 235 (464)
Q Consensus 166 ~~~~~----~d-----~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~- 235 (464)
+.|+ ++ .+.+++.+++... ..+++++++++| +..|.+++. +.|++.|..++ |++||||....
T Consensus 267 -n~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~---~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 267 -NAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCH---HHHHHHhCCCC--EEEEccchhhhc
Confidence 2332 24 7888888876321 123447999999 889999864 55666776666 68999998642
Q ss_pred cCCCCCCcc--chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEE
Q 037587 236 FDSPSSSFI--SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMI 285 (464)
Q Consensus 236 ~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l 285 (464)
|.+ .+. +.+...+ +..+.++++.|.+|.+ +|+.-+..
T Consensus 339 F~p---~~~~~sam~~ga--------~~~~~i~vtQStHKtL--~alTQaS~ 377 (714)
T PRK15400 339 FSP---IYEGKCGMSGGR--------VEGKVIYETQSTHKLL--AAFSQASM 377 (714)
T ss_pred cCc---ccCCcChhhcCC--------CCCCceEEEEchhhcc--cchhHHhH
Confidence 222 111 2211111 1225668899999997 66655544
No 334
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.55 E-value=8.5e-13 Score=137.46 Aligned_cols=174 Identities=18% Similarity=0.174 Sum_probs=119.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-cccCCCcEEEEEecC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-LKWRPGVEIVPIHCS 164 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~~g~~~~~v~~~ 164 (464)
..+..+.+|+.++ .....+++||+|.++..++.+++.+||.||++..||.+..+. +... |++++++...
T Consensus 176 i~eAq~~AA~~fg---------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLs-Ga~PVYl~P~ 245 (720)
T PRK13578 176 AKDAQKHAAKVFN---------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQA-GATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHhC---------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHc-CCeEEEeecc
Confidence 4566666666665 345688999999999999999999999999999999988875 5555 9999998765
Q ss_pred CCCCcc----cCH-----HHHHHHHHHHh-h--cC-CceEEEEEeCCCCCCCCCCCHHHHHHHHHH-HhhCCeEEEEecc
Q 037587 165 SSNGFR----ITI-----SALENAYQQAQ-T--LN-LKVKGVLITNPSNPLGTAMTHQELNHLINF-SKSKRIHIVSDEI 230 (464)
Q Consensus 165 ~~~~~~----~d~-----~~l~~~i~~~~-~--~~-~~~~~vil~~P~NPtG~~~s~~~l~~i~~~-~~~~~~~lI~Dea 230 (464)
- +.|+ ++. +.+++++++.. . .. ...+++++++| +..|.+++ ++.|++. ++.++ .|++|||
T Consensus 246 ~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~yd---i~~I~~~~~h~~~-~llvDEA 319 (720)
T PRK13578 246 R-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYN---ARQVVDKIGHLCD-YILFDSA 319 (720)
T ss_pred c-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeec---HHHHHHHhhccCC-cEEEeCc
Confidence 3 2343 344 44888876531 1 01 12589999999 88999986 5566666 46667 8999999
Q ss_pred ccccc-cCCCCCCcc-chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE
Q 037587 231 YSGTV-FDSPSSSFI-SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY 286 (464)
Q Consensus 231 y~~~~-~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~ 286 (464)
|.... |.+.-..++ +..++-+ +.+.++++.|.+|.+ +++.-+..+
T Consensus 320 hgah~~F~p~~~~~p~~al~~Ga---------D~p~i~v~QStHKtL--~alTQaS~L 366 (720)
T PRK13578 320 WVGYEQFIPMMADCSPLLLELNE---------NDPGIFVTQSVHKQQ--AGFSQTSQI 366 (720)
T ss_pred chhhhccCcccccCChhhhhcCC---------CCCCeEEEEChhhcc--hhhhhHhhh
Confidence 97642 221100111 1112211 235678899999997 566655443
No 335
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.55 E-value=4.3e-12 Score=122.21 Aligned_cols=166 Identities=19% Similarity=0.206 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc---CCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW---RPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~~g~~~~~v~~ 163 (464)
..+...+++..+ ..++++++++..++..++..|+.+|+.|+....+|.+....++. ..|++...+++
T Consensus 80 ~~le~~iaal~g----------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 80 DVLESGIAALEG----------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred HHHHHHHHHHhC----------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 455566666543 44588899999999999999999999999999999987766442 23777777665
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+ +++.+++++++ ++++|++-+|.||+..+. +++++.++|+++|+++|+|+.++...+-
T Consensus 150 ~-------~~~~~~~~i~~------~t~~V~~ESPsNPll~v~---DI~~l~~la~~~g~~vvVDnTf~~p~~~------ 207 (409)
T KOG0053|consen 150 D-------DLKKILKAIKE------NTKAVFLESPSNPLLKVP---DIEKLARLAHKYGFLVVVDNTFGSPYNQ------ 207 (409)
T ss_pred h-------hHHHHHHhhcc------CceEEEEECCCCCccccc---cHHHHHHHHhhCCCEEEEeCCcCccccc------
Confidence 3 56777777764 799999999999999985 5777788888999999999999864222
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHH
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATK 298 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~ 298 (464)
....+ +..|+++|.+|.+| -.-+=.|.++.+...+...++.
T Consensus 208 -~pL~l-------------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~ 249 (409)
T KOG0053|consen 208 -DPLPL-------------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF 249 (409)
T ss_pred -Chhhc-------------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH
Confidence 22223 45689999999995 3345567777754555444433
No 336
>PRK07480 putative aminotransferase; Validated
Probab=99.54 E-value=1.1e-11 Score=125.89 Aligned_cols=355 Identities=15% Similarity=0.134 Sum_probs=189.4
Q ss_pred CCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+. ..+ ..|.+.++++++.+. ......+ .....+.+..+|+.+.+...
T Consensus 43 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~--~~~~~~~~~~lae~L~~~~p-- 108 (456)
T PRK07480 43 YLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRE----------LPYYNTF--FKTTHPPAIELAAKLAEVAP-- 108 (456)
T ss_pred EEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHh----------cCCcccc--cccCCHHHHHHHHHHHHhCC--
Confidence 44445567789987652 223 346677766664221 1111111 01224555666666654321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCcE------------EEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~~ 164 (464)
...+.++++++++|++..+++.... +| .+|+...-+|++.........|.. +..++.+
T Consensus 109 --~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p 186 (456)
T PRK07480 109 --PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQP 186 (456)
T ss_pred --CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCC
Confidence 2246899999999999999876421 22 468888888877532211111111 1111110
Q ss_pred C--CCCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 165 S--SNGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 165 ~--~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
. ...+..+ ++.+++.+.+ ....++.+|++.-...-.|.. .|.+.++++.++|+++|+++|.||++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG 264 (456)
T PRK07480 187 YWFGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICG 264 (456)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence 0 0000011 2444443322 112366666665334445664 4666799999999999999999999987
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHH------hcccCCCC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATK------MSSFGLVS 306 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~------~~~~~~~s 306 (464)
|+..+ ..... +.. + ..+. +-+|+|.+| .|+ .+|.++++ +.+.+.+.. ....++.+
T Consensus 265 --fGRtG-~~~a~-~~~-g--------v~PD---iv~~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 265 --FGRTG-EWFGS-QHF-G--------IKPD---LMTIAKGLT-SGYIPMGAVGVG-DRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred --CCcCc-chhhh-hhc-C--------CCCC---eeeeehhhc-cCCccceEEEEc-HHHHHHHhcCCCCcccCCCCCcC
Confidence 43221 11111 111 1 1122 348899998 784 89999985 445554421 11123356
Q ss_pred hHHHHHHHHHcC---CchhhHHHH-HHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-CCh---hH-H
Q 037587 307 SQTQYLLSRMLS---DKKFTCNYM-KENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-NTF---EA-E 377 (464)
Q Consensus 307 ~~~q~~~~~~l~---~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-~~~---~~-~ 377 (464)
+++.+++.+.|+ +.++ .+.. +++-+.+.+. +.+ +.++++......-|+++-+++...... ... .. .
T Consensus 327 pl~~Aaa~a~L~~l~~~~l-~~~~~~~~g~~l~~~---l~~-l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~ 401 (456)
T PRK07480 327 PVAAAVALANLRILRDEGI-VERVRDDTGPYLQKR---LRE-LADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVG 401 (456)
T ss_pred HHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHH---HHH-hhcCCCeeeEEeecceEEEEEeccccccccCcchhhHH
Confidence 777776666554 2222 1222 1222222222 222 333443211123356777777422110 000 01 1
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..+...+ .++||++.+. .+.+|++... ++++++++++++|.+++.+.
T Consensus 402 ~~~~~~~-~~~Gll~~~~-------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 402 TICRDHC-FANGLIMRAV-------GDRMIISPPLVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred HHHHHHH-HHCCcEEeec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2344444 4679999752 1469999876 69999999999999998764
No 337
>PRK07036 hypothetical protein; Provisional
Probab=99.54 E-value=2e-11 Score=124.33 Aligned_cols=356 Identities=12% Similarity=0.108 Sum_probs=193.1
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.+++.++... ......+. ....+.+..+|+.+.+...
T Consensus 44 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~~--~~~~~~~~~lae~L~~~~p-- 109 (466)
T PRK07036 44 YVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARR----------LPYYTPFG--DMTNAPAAELAAKLAELAP-- 109 (466)
T ss_pred EEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHh----------Cccccccc--ccCCHHHHHHHHHHHHhCC--
Confidence 4444556778998755 2333 346677776664221 11111121 0124556667777764321
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc------C-C-CCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA------D-P-GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~------~-~-gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
-..+.+++++++++++..+++... . + ..+|+...-+|++....+....|. .+..++..
T Consensus 110 --~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p 187 (466)
T PRK07036 110 --GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSP 187 (466)
T ss_pred --CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCC
Confidence 123589999999999999988642 1 2 257888888887754332111111 12222221
Q ss_pred C--CCCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 165 S--SNGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 165 ~--~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
. ...+..+ ++.+++.+.. ....++.+|++.-...-.|.. .+.+.++++.++|++||+++|.||+..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tG 265 (466)
T PRK07036 188 NPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTG 265 (466)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhC
Confidence 1 0011111 1233333321 122456666655335555664 5677899999999999999999999987
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh---------cccC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM---------SSFG 303 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~---------~~~~ 303 (464)
|+..+ ......... + ..+. +-+++|.+| .| +.+|.++++ +.+.+.+... ...+
T Consensus 266 --fGRtG-~~~~~~~~~-g--------v~PD---ivt~gK~l~-gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~ 328 (466)
T PRK07036 266 --FGRLG-HFFASEAVF-G--------IQPD---IITFAKGLT-SGYQPLGAVIIS-ERLLDVISGPNAKGNVFTHGFTY 328 (466)
T ss_pred --CCcCc-hhhhhhhhc-C--------CCCC---EEEEccccc-cCccccEEEEEc-HHHHHHHhcccCcCcccccCCCC
Confidence 43221 111111010 0 1122 347899998 88 599999985 4455544321 1112
Q ss_pred CCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC-----Chh
Q 037587 304 LVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN-----TFE 375 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~-----~~~ 375 (464)
..++++.+++.+.|+ +.+. .+..+++-+.+++. |. .+.++++......-|+++.+++....... ...
T Consensus 329 ~gnpl~~aaa~a~Le~i~~~~l-~~~~~~~g~~l~~~---L~-~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~ 403 (466)
T PRK07036 329 SGHPVACAAALKNIEIMEREGL-CEHVREVGPYFEER---LA-SLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIA 403 (466)
T ss_pred CCCHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHH---HH-HhccCCCEEEEEeeceEEEEEEccCccccCCCCchhH
Confidence 346666666665554 2222 22333333333332 21 23333332222244678888874321111 001
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
....+...++ ++||++.+.. +.+|++... ++++++++++++|.+++++.
T Consensus 404 ~~~~~~~~~~-~~Gvl~~~~~-------~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 404 IGQRIDRHCQ-ERGLLVRPLE-------HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred HHHHHHHHHH-HCCcEEeecC-------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1224555554 6799997631 358888765 69999999999999999775
No 338
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.52 E-value=5.6e-11 Score=120.83 Aligned_cols=358 Identities=12% Similarity=0.053 Sum_probs=191.0
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ ...+ ..|.+.++++++... ....+. ..-..+.+..+|+.+.+....
T Consensus 51 ~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~------------~~~~~~-~~~~~~~~~~lAe~L~~~~p~- 116 (459)
T PRK06931 51 WVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTS------------GLPLHT-LDLTTPLKDAFSEYLLSLLPG- 116 (459)
T ss_pred EEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhh------------hccccc-cccCCHHHHHHHHHHHHhCCC-
Confidence 4444556778999765 2323 346677766664211 010111 011245666677776543210
Q ss_pred CCCCC-CcE-EEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC------------cEEEEEecCCC--
Q 037587 105 VKFDP-NKL-VLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHCSSS-- 166 (464)
Q Consensus 105 ~~~~~-~~i-~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~-- 166 (464)
... ..+ +++++++|++..+++... ....+|+...-+|++....+....| ..+..+|....
T Consensus 117 --~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (459)
T PRK06931 117 --QGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYR 194 (459)
T ss_pred --ccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccc
Confidence 011 134 556899999999888642 2346788888888776533221101 01222222110
Q ss_pred CCcc----cCHHHHHHHHHHHhh----cCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 167 NGFR----ITISALENAYQQAQT----LNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 167 ~~~~----~d~~~l~~~i~~~~~----~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
..|. -+.+.+++.+++... ...++.+||+ -| ..-.|.. .+.+.++++.++|+++|+++|.||+..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~-EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGf-- 271 (459)
T PRK06931 195 CPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVIL-EAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGF-- 271 (459)
T ss_pred ccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEE-ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcC--
Confidence 0011 123334333332211 1234666555 45 3344654 56788999999999999999999999874
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLS 314 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~ 314 (464)
+..+ .+.. .+. + +..+. +-+++|.+| .|+.+|.+++. +.+ +.+.. ....+..++++.+++.
T Consensus 272 GRtG-~~~a-~~~---~------gv~PD---ivt~gK~l~-gG~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla~aaal 334 (459)
T PRK06931 272 ARTG-KMFA-FEH---A------GIEPD---IIVMSKAVG-GGLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLAMATGL 334 (459)
T ss_pred CcCc-hHHH-hhh---c------CCCCC---EEEeccccc-CCcceeeeeeH-HHH-hhccCCCCCCCCCCCHHHHHHHH
Confidence 3221 1111 111 1 01123 347899998 89999988774 333 33321 1122235677766666
Q ss_pred HHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-------C-ChhHHHHHHHH
Q 037587 315 RMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-------N-TFEAEKELWKK 383 (464)
Q Consensus 315 ~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-------~-~~~~~~~l~~~ 383 (464)
+.|+ +.+. .++.+++-+.+++. |.+..+++++....-.-|+++.+++...... . +......+...
T Consensus 335 a~L~~l~~~~l-~~~~~~~G~~l~~~---L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (459)
T PRK06931 335 TTLKILKEENL-AQNAAERGEWLKAQ---LAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKA 410 (459)
T ss_pred HHHHHHHhCCH-HHHHHHHHHHHHHH---HHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHH
Confidence 6554 3232 23333333333332 3332233443222223467777877432110 0 11112345555
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++ ++||++.++... .+.+|+..+. ++++++++++++|.+++.+
T Consensus 411 ~~-~~Gvl~~~~~~~----~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 411 CF-ENGLLLERGGRN----GNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred HH-HCCcEEeecCCC----CCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 54 679999865321 3579988876 7999999999999999875
No 339
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.52 E-value=6.7e-12 Score=130.69 Aligned_cols=171 Identities=14% Similarity=0.086 Sum_probs=116.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+..+.+|+.++ .....+++||+|.++..++.+++.+||.||++..||.+..+.+... |+++++++...
T Consensus 197 i~eAe~~aA~~fg---------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLils-ga~PVYl~P~~ 266 (713)
T PRK15399 197 HLEAEEYIARTFG---------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMS-DVVPIWLKPTR 266 (713)
T ss_pred HHHHHHHHHHHhC---------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHc-CCeeEEecccc
Confidence 3556666666664 3456889999999999999999999999999999999888877766 99999987543
Q ss_pred CCCcc----cCH-----HHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE-EEeccccccc
Q 037587 166 SNGFR----ITI-----SALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI-VSDEIYSGTV 235 (464)
Q Consensus 166 ~~~~~----~d~-----~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l-I~Deay~~~~ 235 (464)
+.|+ ++. +.+++.+++... ..+++++++++| +..|.+++.+. |++.| |+.+ ++||||....
T Consensus 267 -n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~p-TYdGi~yd~~~---I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 267 -NALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNS-TYDGLLYNTDW---IKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred -cccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECC-CCCceeeCHHH---HHHHh---CCCEEEEeccchhhh
Confidence 2333 344 888888876421 134578999999 88999987555 55555 4444 6999998642
Q ss_pred -cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE
Q 037587 236 -FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY 286 (464)
Q Consensus 236 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~ 286 (464)
|.+.- +..+.+.... .....++++.|.+|.+ +|+.-+..+
T Consensus 338 ~F~p~~-~~~sam~~~~--------~aD~~i~~tQStHKtL--~alTQaS~i 378 (713)
T PRK15399 338 HFHPIY-QGKSGMSGER--------VPGKVIFETQSTHKML--AAFSQASLI 378 (713)
T ss_pred hcCccc-CCcChhhCCC--------CCCeeeeeeeehhccc--cccchheee
Confidence 22210 0012211110 1224566789999997 666655543
No 340
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.52 E-value=1.1e-11 Score=125.02 Aligned_cols=281 Identities=18% Similarity=0.150 Sum_probs=160.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCcE-------------EEEEecCCCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGVE-------------IVPIHCSSSN 167 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~~-------------~~~v~~~~~~ 167 (464)
-+.+++++++++++..+++.... +| .+|+...-+|.+....+....+.. +..++.. ..
T Consensus 105 ~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~ 183 (427)
T TIGR00508 105 LDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QN 183 (427)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-Cc
Confidence 36899999999999988886431 23 578888888887543222111210 1111111 01
Q ss_pred Ccc-----cCHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 168 GFR-----ITISALENAYQQAQTLNLKVKGVLITNP--SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 168 ~~~-----~d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.+. -|++++++.+.. ...++.+|++. | .+-.|. ..+.+.++++.++|+++|+++|+||++.++...+.
T Consensus 184 ~~~~~~~~~~~~~l~~~l~~---~~~~vaavivE-Pv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~ 259 (427)
T TIGR00508 184 RFDEEWNEEAITPLAKLMEL---HSDEIAAVILE-PIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK 259 (427)
T ss_pred cccchhHHHHHHHHHHHHHh---cCCcEEEEEEe-chhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc
Confidence 111 134566666543 22356555554 5 444455 45789999999999999999999999976322222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc-EEEEEEecCHHHHHHHHHh-------cccCCCChHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF-RVGMIYSNNERVVSAATKM-------SSFGLVSSQTQY 311 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl-RiG~l~~~~~~~~~~~~~~-------~~~~~~s~~~q~ 311 (464)
.+.. +.. + ..+.++ +++|.++ .|+ .++.+++ ++.+.+.+... ...+..++++.+
T Consensus 260 --~~~~--~~~-~--------v~pDi~---~~gK~l~-gG~~p~~a~~~-~~~~~~~~~~~~~~~~~~~~T~~g~p~~~a 321 (427)
T TIGR00508 260 --LFAC--EHA-G--------VVPDIL---CVGKALT-GGYMTLSATVT-TDKVAQTISSGEAGCFMHGPTFMGNPLACA 321 (427)
T ss_pred --cchh--hhc-C--------CCCCEE---Eechhhh-cCcccceEEEE-cHHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 1111 111 1 112222 4899997 784 6787777 44555555421 111224666666
Q ss_pred HHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC-eeec--CCccEEEEEecCcccccCChhHHHHHHHHHHHhc
Q 037587 312 LLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI-RCLK--SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~--~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~ 388 (464)
++.+.|+--. + +...+.++++-++|.+.|++++. .... ..-|.++.+.+.... ....+...++ ++
T Consensus 322 aa~a~l~~l~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~------~~~~~~~~l~-~~ 389 (427)
T TIGR00508 322 VAEASLAILL---E--GEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV------NVEELQKKFV-EQ 389 (427)
T ss_pred HHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc------CHHHHHHHHH-HC
Confidence 6666554211 0 01233444455556666655421 1111 112556777774211 1124666665 67
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 389 GLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
||++.+.. ..+|++... +++++++++++++++++.+
T Consensus 390 Gv~~~~~~-------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 390 GVWIRPFG-------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CeEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99997532 368998875 6899999999999998864
No 341
>PLN02263 serine decarboxylase
Probab=99.51 E-value=1.5e-11 Score=122.70 Aligned_cols=292 Identities=11% Similarity=0.031 Sum_probs=191.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCC--cEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPN--KLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
+..++.+.+-+++.+.++ .+++ .=++|+|+|+++..++.+..+ +...+++++-+|..+..++..+ |++++.
T Consensus 130 ~s~~~E~~Vi~wla~L~g----~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~ll-gi~~~~ 204 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE----IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMECVK 204 (470)
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhc-CCcceE
Confidence 457888889999988876 3332 357899999999998877533 3347888898998899888877 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe-----EEEEeccccccc
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI-----HIVSDEIYSGTV 235 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~-----~lI~Deay~~~~ 235 (464)
+|++ .++.+|+++|+++|.+. ..++-+|+.+-+..++|.+ +++++|.++|+++|+ |+.+|.+|+++.
T Consensus 205 Vp~d--~~g~mD~~aL~~aI~~d---~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~ 276 (470)
T PLN02263 205 VDTL--VSGEIDCADFKAKLLAN---KDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLM 276 (470)
T ss_pred eccC--CCCcCcHHHHHHHHHhC---CCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhH
Confidence 9986 46789999999998752 1235556667778999999 678888888989886 999999998764
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc-------CCCCh-
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF-------GLVSS- 307 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~-------~~~s~- 307 (464)
..... ..+. ... .....-+..+.+|.++ ....+|.++.+++.+ ..+.....| ...+.
T Consensus 277 lPf~~-~~~~-~df-----------~~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~ 341 (470)
T PLN02263 277 MPFVK-RAPK-VTF-----------KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRN 341 (470)
T ss_pred hhhcc-cccc-cCC-----------CcCccEEEECCccccC-CCcCEEEEEEehhhH-hhhccChHhhCCCCCCcCCCCC
Confidence 31110 0000 111 1123334569999987 777899999865433 222111111 01111
Q ss_pred ----HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcccccCChhHHHHHHH
Q 037587 308 ----QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 308 ----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
+...+....+. .+-+++..+..-+..+++.+.|++.|+... .|..+ .+.+..|. .
T Consensus 342 g~~al~lW~~L~~~G-----~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~-~V~f~~p~--------------~ 401 (470)
T PLN02263 342 GHAPIFLWYTLNRKG-----YRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSS-TVVFERPK--------------D 401 (470)
T ss_pred cHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCce-EEEEecCc--------------h
Confidence 22222222222 233455555666677888899988887654 44544 44454331 0
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
... .+|..+.. .++.++|++.. ++.+.++++++.|++.....
T Consensus 402 ~~~-~~gW~L~~-------~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 402 EEF-VRRWQLAC-------QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred HHh-hcceEEcc-------CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 011 24666653 13469999976 68899999999998877644
No 342
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.51 E-value=8.1e-14 Score=132.30 Aligned_cols=189 Identities=15% Similarity=0.225 Sum_probs=130.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh--cccCCCc
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD--LKWRPGV 156 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--~~~~~g~ 156 (464)
.|.......+|.+.+++.++ .+..+++.+++.+..++++++++|++.|++..++|....+. .....|+
T Consensus 24 ~Yg~D~~~~~l~~~i~~l~g----------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ga~~~~~G~ 93 (290)
T PF01212_consen 24 AYGEDPTTARLEERIAELFG----------KEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDETGAIEELSGA 93 (290)
T ss_dssp CTTSSHHHHHHHHHHHHHHT----------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSSTTHHHHHTTC
T ss_pred ccCCChhHHHHHHHHHHHcC----------CCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeeccchhhHhcCc
Confidence 57665556777777777775 34567899999999999999999999999999976422222 2223499
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
++++++.+. +..+++++|++.+........++++|++++|+|-. |.++|.+++++|.++|+++|+.++.|.+-....
T Consensus 94 ~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a 171 (290)
T PF01212_consen 94 KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANA 171 (290)
T ss_dssp EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHH
T ss_pred EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHh
Confidence 999998653 25689999999998865444689999999998864 899999999999999999999999999863110
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA 295 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~ 295 (464)
... .-.++.++.. ....+.-|++|..|+++ -+.++++++.+.+.
T Consensus 172 ~~~---~~~~~~e~~~-----------~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 172 AAA---LGVSLAEIAA-----------GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKA 215 (290)
T ss_dssp HCH---HHHHHHHHHT-----------TSSEEEEETTSTT-SSS--EEEEEESHHHHHHH
T ss_pred hhc---ccccHHHHhh-----------hCCEEEEEEEccccccc--ceEEEechHHHHHH
Confidence 100 0123344433 23355669999998765 24555654434443
No 343
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.51 E-value=1.4e-11 Score=126.28 Aligned_cols=318 Identities=14% Similarity=0.174 Sum_probs=187.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCC--------CCC-CCCcEEEeCChHHHHHHHHHHhc----C---------------
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNK--------VKF-DPNKLVLTAGSTAANETLMFCLA----D--------------- 131 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~--------~~~-~~~~i~it~G~~~al~~~~~~l~----~--------------- 131 (464)
+.......++.+.+.+++.+..+.. ... +..--++|+|+|+++..++.+.. .
T Consensus 121 ~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~ 200 (522)
T TIGR03799 121 IETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFA 200 (522)
T ss_pred eecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchh
Confidence 3334455788888888887764210 000 11235789999999888776531 1
Q ss_pred -------CCCeEEEcCCCCCChhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCC
Q 037587 132 -------PGDAFLLPTPYYPGFDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNP 201 (464)
Q Consensus 132 -------~gd~Vlv~~p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NP 201 (464)
++..|++.+-.|......+..+ |+ +++.+|++. ++.+|+++|++.+++..+.+.++-+|+-+..++.
T Consensus 201 ~~~~~~~~~~~v~~S~~~H~S~~kaa~~l-glg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 201 ALKHYGYDGLAILVSERGHYSLGKAADVL-GIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhccCCceEEEECCCchHHHHHHHHHc-CCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 1346888888888888777766 77 788999874 5689999999999865544444444444455779
Q ss_pred CCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE
Q 037587 202 LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR 281 (464)
Q Consensus 202 tG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR 281 (464)
||.+- .+++|+++|+++|+++.+|.+|+....-.. ....++..+ .....+..|.+|.++ ....
T Consensus 278 tGaiD---pl~eIa~i~~~~g~~lHVDaA~gg~~~~~~-----~~r~~l~gl--------e~aDSit~d~HK~l~-~P~g 340 (522)
T TIGR03799 278 TGNID---PLDEMADIAQELGCHFHVDAAWGGATLLSN-----TYRHLLKGI--------ERADSVTIDAHKQLY-VPMG 340 (522)
T ss_pred CCCcC---CHHHHHHHHHHcCCeEEEEchhhhHHHhCH-----HHHHHhcCc--------hhCCEEEEChhhcCC-cCcc
Confidence 99995 577788999999999999999986432211 111222211 133456779999765 4456
Q ss_pred EEEEEecCHHHHHHHHHhccc---------------CCCCh--HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 282 VGMIYSNNERVVSAATKMSSF---------------GLVSS--QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 282 iG~l~~~~~~~~~~~~~~~~~---------------~~~s~--~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
+|.++.+++.+.+.+.....| .+-+. +...++...+. .+-+++..+...+..+++.+.
T Consensus 341 ~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG-----~~G~~~ii~~~~~la~~l~~~ 415 (522)
T TIGR03799 341 AGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIG-----RKGYELLIDQSIEKAKYFADL 415 (522)
T ss_pred cEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 899988665544333221111 01111 11222223332 233556666667777888888
Q ss_pred HHhC-CCeeec-CCccEEEEEec-CcccccC----------C----hhH-HHHHHHHHHHhcCeEEeC-CC----CCCCC
Q 037587 345 LKVA-GIRCLK-SNAGLFCWVDM-RHLLVSN----------T----FEA-EKELWKKIIFEVGLNISP-GS----SCHCN 401 (464)
Q Consensus 345 l~~~-g~~~~~-~~~g~f~~~~l-~~~~~~~----------~----~~~-~~~l~~~ll~~~gI~v~p-g~----~f~~~ 401 (464)
|.+. ++++.. ++-+ .+.+++ |...... . .+. ..++.+++. +.|..... .. .+...
T Consensus 416 L~~~~~~el~~~p~l~-iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~ 493 (522)
T TIGR03799 416 IQQQPDFELVTEPELC-LLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQ 493 (522)
T ss_pred HhhCCCeEEecCCCcc-EEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCC
Confidence 8876 787764 4455 444443 3221110 0 000 123444443 44655432 22 12111
Q ss_pred CCCeEEEEeec--CCHHHHHHHHHH
Q 037587 402 EPGWFRICFAN--ITEETLQVALQR 424 (464)
Q Consensus 402 ~~~~~Ris~~~--~~~e~l~~~l~~ 424 (464)
+...||+++.+ .++++++.+++.
T Consensus 494 ~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 494 PTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred CcEEEEEEecCCCCCHHHHHHHHHH
Confidence 22469999977 467888876653
No 344
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.51 E-value=3e-11 Score=122.23 Aligned_cols=339 Identities=9% Similarity=0.094 Sum_probs=174.2
Q ss_pred CCCCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.+...+||+..+. +.+ ..|.+.+++.++.+ ....|.. ....+..+|+.+.+...
T Consensus 39 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-------------~~~~~~~---~~~~~~~la~~l~~~~p 102 (431)
T PRK06209 39 GAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQ-------------DGCNFTR---PSAIELDAAESFLELID 102 (431)
T ss_pred CCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHH-------------hCcCCCC---CCHHHHHHHHHHHHhCC
Confidence 3455566677889997652 334 34677777766532 1222321 13333345555543221
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhcC-CC-CeEEEc-CCCCCChhhh----cccCCCcE--E--EEEecCCCCCccc
Q 037587 103 NKVKFDPNKLVLTAGSTAANETLMFCLAD-PG-DAFLLP-TPYYPGFDRD----LKWRPGVE--I--VPIHCSSSNGFRI 171 (464)
Q Consensus 103 ~~~~~~~~~i~it~G~~~al~~~~~~l~~-~g-d~Vlv~-~p~y~~~~~~----~~~~~g~~--~--~~v~~~~~~~~~~ 171 (464)
..+.++++++++|++..+++.... .| ..|+.. .-+|.++... .....|.. . ...... + -
T Consensus 103 -----~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~-~ 172 (431)
T PRK06209 103 -----GADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR----Y-N 172 (431)
T ss_pred -----ccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC----C-C
Confidence 136899999999999999886421 23 345544 2233221100 00000110 0 011111 1 2
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
|++.+++.+++ ...++.+|++ .|- .|...+.+.+++|.++|+++|+++|+||++.++.+... .......+
T Consensus 173 d~~~l~~~l~~---~~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~--g~~~~~gv-- 242 (431)
T PRK06209 173 DIASLEALFED---HPGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMR--GAQKLYGI-- 242 (431)
T ss_pred CHHHHHHHHHh---CCCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcc--hhhHHhCC--
Confidence 68888888764 1224555444 452 34466788999999999999999999999976422111 00111111
Q ss_pred ccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH--HHH---h-----cccCCCChHHHHHHHHHcC---
Q 037587 252 DRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA--ATK---M-----SSFGLVSSQTQYLLSRMLS--- 318 (464)
Q Consensus 252 ~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~--~~~---~-----~~~~~~s~~~q~~~~~~l~--- 318 (464)
.+. +.+++|.+| .|+.+|.++++ +.+.+. +.. . ...++.+++..+++.+.|+
T Consensus 243 ----------~PD---i~t~gK~lg-gG~p~~av~~~-~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~ 307 (431)
T PRK06209 243 ----------VPD---LSCFGKALG-NGFAVSALAGK-REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR 307 (431)
T ss_pred ----------Ccc---eeeehhhhc-CCcccEEEEEH-HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh
Confidence 112 468999998 78999999994 445443 210 1 1112234444444444433
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeee-cCCccEEEEEecCcccc-cCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCL-KSNAGLFCWVDMRHLLV-SNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~-~~~~g~f~~~~l~~~~~-~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+.+. .++.++.-+..++.+.+...++++... ...+.++.+.-+..... .....-...+...++ ++||++.|
T Consensus 308 ~~~~----~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~-- 380 (431)
T PRK06209 308 DEDV----IERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS-- 380 (431)
T ss_pred ccCH----HHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc--
Confidence 3322 222222222233333333333454321 22232222221111111 111111114556655 57997621
Q ss_pred CCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 397 SCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++|+.. .+++++++++++|.++++...
T Consensus 381 ---------l~is~~-ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 381 ---------LVVSYA-HGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred ---------cccccc-CCHHHHHHHHHHHHHHHHHHH
Confidence 466643 589999999999999988764
No 345
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.51 E-value=3.7e-12 Score=119.29 Aligned_cols=296 Identities=16% Similarity=0.180 Sum_probs=184.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
...|.+.||..-+- ---+.+++++.++..++..++++||.|+...--|++.... ++.+ |+++..+
T Consensus 64 ~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~-Gi~v~fv 132 (426)
T COG2873 64 TDVLEERIAALEGG----------VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRL-GIEVRFV 132 (426)
T ss_pred HHHHHHHHHHhhcc----------hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhc-CcEEEEe
Confidence 47788888887641 1235678889999999999999999999988888775443 4556 9999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++.+++++++ ++|+|++-.-.||-+.+. ++++|.++|+++|+++|+|..+..-++-.+
T Consensus 133 d~~-------d~~~~~~aI~~------nTkavf~EtigNP~~~v~---Die~ia~iAh~~gvpliVDNT~atpyl~rP-- 194 (426)
T COG2873 133 DPD-------DPENFEAAIDE------NTKAVFAETIGNPGLDVL---DIEAIAEIAHRHGVPLIVDNTFATPYLCRP-- 194 (426)
T ss_pred CCC-------CHHHHHHHhCc------ccceEEEEeccCCCcccc---CHHHHHHHHHHcCCcEEEecCCCcceecch--
Confidence 743 68999999986 999999999999999996 588899999999999999998764322211
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH-HHhcc-------cC--------CC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA-TKMSS-------FG--------LV 305 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~-~~~~~-------~~--------~~ 305 (464)
+ ..+-.|+++|++|..|=.|--+|-++.......... .++.. +. ..
T Consensus 195 -------~-----------~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~ 256 (426)
T COG2873 195 -------I-----------EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGN 256 (426)
T ss_pred -------h-----------hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhccc
Confidence 1 225668899999999878888888776432221110 01000 00 00
Q ss_pred ChHHHHHHHHHcCCc--------hhh----HHHHHHHHHHHHHHHHHHHHHHHhC-CCe------------------eec
Q 037587 306 SSQTQYLLSRMLSDK--------KFT----CNYMKENRKRLRKRKEMLVSGLKVA-GIR------------------CLK 354 (464)
Q Consensus 306 s~~~q~~~~~~l~~~--------~~~----~~~~~~~~~~~~~~~~~l~~~l~~~-g~~------------------~~~ 354 (464)
..+...+-...|+|- .|+ .+-+.-+.++..++...+.+.|+++ .+. +.+
T Consensus 257 ~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~ 336 (426)
T COG2873 257 AAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLP 336 (426)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhcc
Confidence 011111111222221 010 1123334556666777788888876 221 222
Q ss_pred CCccEEEEEecCccccc-CChhHHHHHHHHHHH---hcCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHH
Q 037587 355 SNAGLFCWVDMRHLLVS-NTFEAEKELWKKIIF---EVGLNISPGSSCHCN-----------EPGWFRICFANITEETLQ 419 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~-~~~~~~~~l~~~ll~---~~gI~v~pg~~f~~~-----------~~~~~Ris~~~~~~e~l~ 419 (464)
...|-.+.+.+...... ..+.+..+++..+.. -+-+.|-|.+--+.. .++.+|+|++. |+++
T Consensus 337 ~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~ 413 (426)
T COG2873 337 KGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDID 413 (426)
T ss_pred CCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHH
Confidence 23344566666543211 222334444444321 112445566544321 25789999995 5566
Q ss_pred HHHHHHHHHHHh
Q 037587 420 VALQRIKVFAQS 431 (464)
Q Consensus 420 ~~l~~l~~~l~~ 431 (464)
.++.-|++++++
T Consensus 414 DiiaDl~qAl~~ 425 (426)
T COG2873 414 DIIADLEQALEA 425 (426)
T ss_pred HHHHHHHHHHhc
Confidence 677777776653
No 346
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.50 E-value=4e-12 Score=125.65 Aligned_cols=282 Identities=12% Similarity=0.080 Sum_probs=166.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCC-CCcEEEe-CChHHHHHHHHHHhcCCCCeEEEcCCCCCCh-hhhccc--CCCcEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFD-PNKLVLT-AGSTAANETLMFCLADPGDAFLLPTPYYPGF-DRDLKW--RPGVEIVP 160 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~-~~~i~it-~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~--~~g~~~~~ 160 (464)
..+.|+.++++++ ++ ..+|+++ +++|.+++.++..++.+ +.+++..-.|+.- ...+.. + +.++..
T Consensus 43 ~~~~r~~l~~l~~--------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~-~~~~~~ 112 (361)
T TIGR01366 43 VGRVREGLAELFS--------LPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPW-LGEPII 112 (361)
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhc-cCCceE
Confidence 4566777777775 43 3478886 55999999999998743 3333333334322 222222 1 225555
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+. +..++.+ + .+++++|.+++-+|.||...|.+++ ++++|+++|+|.+.+ ++..
T Consensus 113 ~~~~~--~~~~~~~-----~------~~~~~lV~~~h~et~tG~~~pi~~I------~~~~g~~~iVDavqs---~g~~- 169 (361)
T TIGR01366 113 VTADP--GSAPEPQ-----A------DPGVDVIAWAHNETSTGVAVPVRRP------EGSDDALVVIDATSG---AGGL- 169 (361)
T ss_pred EecCC--CCCCCCc-----c------CCCCCEEEEcccCCccceecccccc------cccCCCeEEEEcCcc---ccCC-
Confidence 55442 1122221 1 2488999999999999999986553 467899999999997 4443
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh---------------------
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--------------------- 299 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--------------------- 299 (464)
+ .++. ...+++.|-.|.+|.+|- ++.++.+++.+.+ +...
T Consensus 170 -~-idv~---------------~~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~-~~~~~~~~~~~p~~~d~~~~~~~~~ 230 (361)
T TIGR01366 170 -P-VDIA---------------ETDVYYFAPQKNFASDGG-LWLAIMSPAALER-IEAIAASGRWVPEFLSLPTAVDNSL 230 (361)
T ss_pred -C-CCHH---------------HCCEEEEEchhhcCCCCc-eEEEEECHHHHhh-hhcccCCCCCCchhhhHHHHHhccc
Confidence 1 2221 134578999999987752 5555664443322 2110
Q ss_pred --cccCCCChHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeeecC-C---ccEEEEEecCcccc
Q 037587 300 --SSFGLVSSQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVAG-IRCLKS-N---AGLFCWVDMRHLLV 370 (464)
Q Consensus 300 --~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~-~---~g~f~~~~l~~~~~ 370 (464)
..+++++.....++.++++. +.+ -++...++.++..+++.+.+.+.+ ++++.. . ......+.+++..+
T Consensus 231 ~~~t~~tp~i~~i~~l~~al~~---l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~ 307 (361)
T TIGR01366 231 KNQTYNTPAIATLALLAEQIDW---MNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDID 307 (361)
T ss_pred cCCCCCCchHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccC
Confidence 01122222222233333332 111 145555777788888898888886 454421 1 11112233433221
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..++...| +++||.+.++.. ....+.||||+.. .++++++.++++|++++++
T Consensus 308 ------~~~v~~~L-~~~gI~i~~~~~--~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 308 ------AATVAKIL-RANGIVDTEPYR--KLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ------HHHHHHHH-HHCCCeeccCcc--ccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 22355555 677999987642 2235689999977 8999999999999998775
No 347
>PRK04311 selenocysteine synthase; Provisional
Probab=99.49 E-value=9.7e-12 Score=125.57 Aligned_cols=297 Identities=17% Similarity=0.162 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC------hhhhcccCCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG------FDRDLKWRPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~------~~~~~~~~~g~~~~~ 160 (464)
..+++.+|++++ .+..+++++++.++.+++.++ .+||.|+++...+.. +...+... |++++.
T Consensus 130 ~~~e~~lA~l~G----------ae~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~e~~~~ggs~~i~~~~~~~-G~~l~~ 197 (464)
T PRK04311 130 RALAALLCALTG----------AEDALVVNNNAAAVLLALNAL-AAGKEVIVSRGELVEIGGAFRIPDVMRQA-GARLVE 197 (464)
T ss_pred HHHHHHHHHHhC----------CCeEEEECCHHHHHHHHHHHh-CCCCEEEEcchhhhhcCcchhhHHHHHHC-CcEEEE
Confidence 577777887764 235677888889999888664 789999998764431 12234445 999998
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCC--CCCCCCHHHHHHHHHHHhhCCeEEEEecccccc----
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNP--LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT---- 234 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NP--tG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~---- 234 (464)
++.+. ..+++++++++.+ ++++|++.+++|| +|.. ...++++|+++|+++|+++|+|.+.+.+
T Consensus 198 v~~~~----~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~ 266 (464)
T PRK04311 198 VGTTN----RTHLRDYEQAINE------NTALLLKVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLS 266 (464)
T ss_pred ECCCC----CCCHHHHHHhcCc------cCeEEEEEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccch
Confidence 87542 2468888888865 7899999999998 4532 1135888999999999999999964321
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYL 312 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~ 312 (464)
.|+-. ..+.+.... ..+..+++.|.+|.+|-+ ..|+++++++ +.+.+++. .....+......+
T Consensus 267 ~~gl~--~~p~~~~~l----------~~GaDiv~fSg~K~LgGp--~~G~i~g~~~-li~~l~~~~~~r~lr~dk~~l~~ 331 (464)
T PRK04311 267 QYGLP--DEPTVQELL----------AAGVDLVTFSGDKLLGGP--QAGIIVGKKE-LIARLKKHPLKRALRVDKLTLAA 331 (464)
T ss_pred hccCC--CCCchhhHH----------hcCCcEEEecCcccccCC--ceEEEEEcHH-HHHHHhhchhHHHHhcchHHHHH
Confidence 11100 011221211 125678899999998623 5899998544 44434321 1111122222333
Q ss_pred HHHHcC---Cch--h----hHHHHHHHHHHHHHHHHHHHHHHHhCC-----CeeecC----CccEEEEEecCcc---ccc
Q 037587 313 LSRMLS---DKK--F----TCNYMKENRKRLRKRKEMLVSGLKVAG-----IRCLKS----NAGLFCWVDMRHL---LVS 371 (464)
Q Consensus 313 ~~~~l~---~~~--~----~~~~~~~~~~~~~~~~~~l~~~l~~~g-----~~~~~~----~~g~f~~~~l~~~---~~~ 371 (464)
+.+.+. ++. + ..+.+....+.+.++...+.+.|+.+. +.+.+. .||-+--..+|.. ...
T Consensus 332 l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~ 411 (464)
T PRK04311 332 LEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP 411 (464)
T ss_pred HHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC
Confidence 332222 111 1 011233334666777888888887752 233322 1221111111111 000
Q ss_pred CChhHHHHHHHHHHHhcC--eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 372 NTFEAEKELWKKIIFEVG--LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 372 ~~~~~~~~l~~~ll~~~g--I~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.. ....++... |++.. |..+ -.++.+.+-+.++.+++++.++++|.+++.
T Consensus 412 ~~-~~~~~l~~~-lr~~~~~i~~r-------~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 412 KD-RSLEALAAR-LRLLPPPVIGR-------IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CC-CCHHHHHHH-HhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 01 112234443 45533 4443 236778899988889999999999998764
No 348
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.44 E-value=7.6e-11 Score=125.33 Aligned_cols=318 Identities=15% Similarity=0.175 Sum_probs=187.7
Q ss_pred cccccCCC---CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCC----CCeEEEcCCCC
Q 037587 75 RELALFQD---YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL----ADP----GDAFLLPTPYY 143 (464)
Q Consensus 75 ~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l----~~~----gd~Vlv~~p~y 143 (464)
.+.+-|.| .+|+.++...+.+++.+..| .+.-.+...+|++ +....+.++ ..+ .++|+++.-.|
T Consensus 527 ~t~hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA~-gE~A~Lmair~yh~~~Ge~~r~~vLIp~saH 601 (954)
T PRK12566 527 AQLHPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSGAQ-GEYAGLLAIRRYHRSRGQSQRDICLIPSSAH 601 (954)
T ss_pred hcCCCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEeccccc
Confidence 44466777 67888888888888887766 3333444444443 333333332 222 25788888777
Q ss_pred CChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 144 PGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 144 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
+.-...+... |++++.++.+++ ..+|+++|++.+++. ..++.+|.+++|++-.+. .+++++|+++|+++|+
T Consensus 602 gtNpasa~~~-GieVv~Vp~D~~--G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~---e~~V~eI~~iah~~Ga 672 (954)
T PRK12566 602 GTNPASAQMA-GMRVVIVECDPD--GNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVY---EEGIREICEVVHQHGG 672 (954)
T ss_pred ccCHHHHHHC-CCEEEEeccCCC--CCcCHHHHHHHhhcc---CCCEEEEEEEecCcCcee---cchHHHHHHHHHHcCC
Confidence 4434445545 999999998743 379999999998631 247888888888665543 3669999999999999
Q ss_pred EEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHHHh
Q 037587 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAATKM 299 (464)
Q Consensus 224 ~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~~~ 299 (464)
++++|.+... ... ...... ..+..++..+++|+|+.| |.-+|.+.+ .+.+...+...
T Consensus 673 lv~vDgA~~~---a~~--~l~~Pg-------------~~GADi~~~s~HKtf~~P~G~GGP~vG~iav-~~~L~pfLp~~ 733 (954)
T PRK12566 673 QVYMDGANLN---AQV--GLARPA-------------DIGADVSHMNLHKTFCIPHGGGGPGMGPIGV-RAHLAPFVANH 733 (954)
T ss_pred EEEEEeeChh---hcc--CCCChh-------------hcCCCEEEecCCcccCcCccCCCCccchhhh-hhhhhhhccCC
Confidence 9999998852 111 111111 226678889999998522 444565544 23233333221
Q ss_pred c--c-------cCC------CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEE--E
Q 037587 300 S--S-------FGL------VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLF--C 361 (464)
Q Consensus 300 ~--~-------~~~------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f--~ 361 (464)
. . ... .+.....++..++.... .+ +.+....-..+.+++.+.|.+. ++.+.++.+-+| +
T Consensus 734 P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG--~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEf 810 (954)
T PRK12566 734 PVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMG--PQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHEC 810 (954)
T ss_pred CCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHC--HH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEE
Confidence 1 0 011 11112223333333322 22 4444444455667888888663 444422222211 2
Q ss_pred EEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 362 WVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 362 ~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+++........ ....++.++|+ ++||...- ..|. ..+++||+... .+++++++++++|+.+.++.+
T Consensus 811 ii~~~~l~~~~g-~~~~dvakRL~-d~Gihapt-~~fP--v~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 811 ILDLRPLKAQTG-ISEEDVAKRLM-DYGFHAPT-MSFP--VPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred EEEccccccccC-CCHHHHHHHHH-HCCcEEeE-Eeec--cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 234432221111 12245888887 78998643 3443 37789999976 689999999999998887743
No 349
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.43 E-value=5e-10 Score=113.48 Aligned_cols=347 Identities=13% Similarity=0.137 Sum_probs=180.6
Q ss_pred CCCCCC-CCCCceEEeecc--cccc--cHHHHHH--HHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHH
Q 037587 27 NPYDQL-HNPSGIIQMGLA--ENQL--SFDLLES--WLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMAR 99 (464)
Q Consensus 27 ~~y~~~-~~~~~~i~l~~~--~n~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 99 (464)
..|..+ .+...+||+..+ .+.+ ..|.+.+ ++.++..... ....... .-..+....+++.+.+
T Consensus 35 G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~--------~~~~~~~---~~~~~~~~~la~~l~~ 103 (443)
T PRK08297 35 GSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAA--------LNKPSNS---DVYTVEMARFVDTFAR 103 (443)
T ss_pred CCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhh--------hhccccC---CcCCHHHHHHHHHHHh
Confidence 345555 256678898655 3333 3466666 6665422100 0000000 0112333445555443
Q ss_pred HcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--------CC------CCeEEEcCCCCCChhhhcccCCCcEEE------
Q 037587 100 IRGNKVKFDPNKLVLTAGSTAANETLMFCLA--------DP------GDAFLLPTPYYPGFDRDLKWRPGVEIV------ 159 (464)
Q Consensus 100 ~~~~~~~~~~~~i~it~G~~~al~~~~~~l~--------~~------gd~Vlv~~p~y~~~~~~~~~~~g~~~~------ 159 (464)
..+ +-..+.|+++++++|++..+++... .. ..+|+...-+|++....+....|....
T Consensus 104 ~~~---p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~ 180 (443)
T PRK08297 104 VLG---DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFP 180 (443)
T ss_pred hcC---CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCC
Confidence 221 0123689999999999999988752 11 257999999988765433222121100
Q ss_pred -----EEecCCCCCc-----c---c------CHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHH
Q 037587 160 -----PIHCSSSNGF-----R---I------TISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFS 218 (464)
Q Consensus 160 -----~v~~~~~~~~-----~---~------d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~ 218 (464)
.++.. .-.+ . . +++.+++.+.+ ...++.+|++. | ..-.|. ..|.+.++++.++|
T Consensus 181 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~E-Pi~g~~G~~~pp~~yl~~lr~lc 255 (443)
T PRK08297 181 KFDWPRIDNP-KLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAE-PIQGEGGDNHFRPEFFAAMRELC 255 (443)
T ss_pred CCCccccCCC-CCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEc-cccCCCCCcCCCHHHHHHHHHHH
Confidence 01100 0000 0 0 12334444432 23467666654 5 333454 46788899999999
Q ss_pred hhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-
Q 037587 219 KSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT- 297 (464)
Q Consensus 219 ~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~- 297 (464)
+++|+++|.||++.++...+. . .. .+... ..+.++ +|+|.+++ | |.+.+ ++ +.....
T Consensus 256 ~~~g~llI~DEV~tGfGRtG~--~-~a-~~~~g---------v~PDiv---~~gK~l~~-~---a~l~~-~~-i~~~~~~ 313 (443)
T PRK08297 256 DEHDALLIFDEVQTGVGLTGT--A-WA-YQQLG---------VRPDIV---AFGKKTQV-C---GIMAG-RR-VDEVEDN 313 (443)
T ss_pred HHcCCEEEEechhhccCccch--H-HH-HHhcC---------CCCCEE---Eecccccc-c---ceecc-hH-HHHhhhh
Confidence 999999999999987422221 1 11 11110 112333 68998752 2 44443 32 222111
Q ss_pred H------hcccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ce-eecCCccEEEEEecC
Q 037587 298 K------MSSFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IR-CLKSNAGLFCWVDMR 366 (464)
Q Consensus 298 ~------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~-~~~~~~g~f~~~~l~ 366 (464)
. ....+..++++..++.+.|+ ..+. .+..+++-+.+. +.|.+...+++ +. ...+. |+++.+.++
T Consensus 314 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~---~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~ 388 (443)
T PRK08297 314 VFAVSSRINSTWGGNLVDMVRARRILEVIEEDGL-VENAARQGEYLL---ARLEELAAEFPAVVSNVRGR-GLMCAFDLP 388 (443)
T ss_pred hccCccccCCCCCccHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHH---HHHHHHHHHCCCcceeeecc-ceEEEEEec
Confidence 1 11122356666666666554 2222 222222222222 22333223332 21 22333 578888885
Q ss_pred cccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 367 HLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.. .....++..++ ++||++.|+. ...+|++.+. +++++++.++++|.+++++.
T Consensus 389 ~~------~~~~~~~~~l~-~~Gvl~~~~~------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 389 TT------ADRDEVIRRLW-EEGVLVLPCG------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CH------HHHHHHHHHHH-HCCEEEecCC------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 31 12234666666 6799998753 2468987665 69999999999999998753
No 350
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.43 E-value=1.5e-10 Score=125.90 Aligned_cols=309 Identities=14% Similarity=0.157 Sum_probs=180.1
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe-CChHHHHHHHHHHh----cCCCC----eEEEcCCCCCChhhhcccCC
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLT-AGSTAANETLMFCL----ADPGD----AFLLPTPYYPGFDRDLKWRP 154 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it-~G~~~al~~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~~ 154 (464)
+|..++...+.+++.+..| .+ ++.+. +|++++....+.++ .++|+ +|++++..|+.....+...
T Consensus 538 qG~l~~i~e~q~~l~eltG----~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~- 610 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITG----YD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA- 610 (954)
T ss_pred HHHHHHHHHHHHHHHHHHC----CC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC-
Confidence 3566777777777777665 33 45554 45655554433332 25665 5999999997766667666
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
|++++.++++.+ ..+|+++|++.+++. ..++.+|++++|++-.+.. +++++|+++|+++|+++++|.++...
T Consensus 611 G~~vv~v~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 611 GMKVVVVACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred CCEEEEECCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhh
Confidence 999999998743 478999999988641 2357888899887653333 35888999999999999999999632
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC----CccEEEEEEecCHHHHHHHHHhc--------cc
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM----PGFRVGMIYSNNERVVSAATKMS--------SF 302 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~----~GlRiG~l~~~~~~~~~~~~~~~--------~~ 302 (464)
...-. ... ..+..++..|.+|+|+. .|--+|++.+.. .+...+.... ..
T Consensus 683 l~~l~-----~pg-------------~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~-~l~p~lpg~~v~~~~~~~~~ 743 (954)
T PRK05367 683 QVGLA-----RPG-------------DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKA-HLAPFLPGHPVQIAGGETGI 743 (954)
T ss_pred ccCCC-----Chh-------------hcCCCEEEecCcccCCCCcCCCCCceEEEeecc-cccccCCCCccCcCCCCCCc
Confidence 22111 111 11455778899999752 344478887743 2222211100 01
Q ss_pred CCCC--hHHHHH----HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccE--EEEEecCcccccCC
Q 037587 303 GLVS--SQTQYL----LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGL--FCWVDMRHLLVSNT 373 (464)
Q Consensus 303 ~~~s--~~~q~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~--f~~~~l~~~~~~~~ 373 (464)
+.++ ...|.. +..++.... .+.+++..+..-.+.+++.+.|.+. .+.+..+.+-. =+.+++........
T Consensus 744 g~v~ta~~g~al~~~~a~~yi~~~G--~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g 821 (954)
T PRK05367 744 GAVSAAPFGSASILPISWMYIRMMG--AEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTG 821 (954)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCC
Confidence 1111 221211 111121111 2334444443445667778888663 33222211100 12234422111101
Q ss_pred hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 374 FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 374 ~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
....++.++| .++|+...- ..|. .++.+||+++. .+++++++++++|..+.++.+
T Consensus 822 -~~~~di~krL-~d~G~~~~t-~~~p--v~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 822 -ITVDDIAKRL-IDYGFHAPT-MSFP--VAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred -CCHHHHHHHH-HHCCCeEee-cCCc--cCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 1124577887 478998754 3343 36789998876 688999999999988776554
No 351
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=8.2e-12 Score=119.38 Aligned_cols=298 Identities=15% Similarity=0.140 Sum_probs=191.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
+.++.+.+|+|++ .++.+++.-| -......+.+|+.||.-|+...-.+..+...++.. |+.+..+.-+
T Consensus 184 hkelE~l~A~f~g---------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLS-gAtiRVfkHN- 251 (519)
T KOG1357|consen 184 HKELEELVARFLG---------VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLS-GATTRVFRHN- 251 (519)
T ss_pred HHHHHHHHHHhcC---------CcceEEEecc-ccccccCcceeecCCcceeeccccchheecccccc-CceEEEEecC-
Confidence 4677777777775 4566777666 45566677789999999999999999888888876 8888777643
Q ss_pred CCCcccCHHHHHHHHHHHhhcCC-----ce-EEEEE-eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 166 SNGFRITISALENAYQQAQTLNL-----KV-KGVLI-TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~-----~~-~~vil-~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
|...||+.|+++...+. .- +.+++ -.-..--|.+ ..+.+++++++++..+++.||+++-...+.
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~Lp~vvalkkkykayl~lDEAHSiGA~g~ 322 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDLPEVVALKKKYKAYLYLDEAHSIGAMGA 322 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---cccHHHHHhhccccEEEEeeccccccccCC
Confidence 56788888877643321 11 22322 2233455665 468889999999999999999998543332
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc---C-CC-ChHHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF---G-LV-SSQTQYLL 313 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~---~-~~-s~~~q~~~ 313 (464)
. -..+..+.. .+..+..|.+++|.|.||.+| ||+.+ ++.+.+.++..... . +. +++.|...
T Consensus 323 t---Grgvce~~g-------~d~~dvDImMGtftKSfga~G---Gyiag-sk~lid~lrt~s~~~~yat~~sppvaqq~~ 388 (519)
T KOG1357|consen 323 T---GRGVCEYFG-------VDPEDVDIMMGTFTKSFGAAG---GYIAG-SKELIDYLRTPSPSALYATSLSPPVAQQIL 388 (519)
T ss_pred C---CcceeeccC-------CCchhheeecceehhhccccc---ceecC-cHHHHhhhccCCCceeecccCChHHHHHHH
Confidence 2 122222211 123466788899999999777 88888 55566655543322 1 22 33444443
Q ss_pred HHH--cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEec--CcccccCChhHHHHHHHHHHHhcC
Q 037587 314 SRM--LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDM--RHLLVSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 314 ~~~--l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l--~~~~~~~~~~~~~~l~~~ll~~~g 389 (464)
..+ +...+. ....++..++++++..+++..|+..|+-++..+....+.+-+ +.... ++-..++ +++
T Consensus 389 ssl~~i~G~dg-t~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dSpVvplll~~~~k~~--------~f~r~~l-~~n 458 (519)
T KOG1357|consen 389 TSVKHIMGEDG-TNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDSPVVPLLLYGPAKIV--------AFSREML-ERN 458 (519)
T ss_pred HHHHhhcCCCc-ccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCCCcceeeecCccccc--------HHHHHHH-hcC
Confidence 332 221112 345677788889999999999999998888766653332222 21111 2445565 446
Q ss_pred eEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 390 LNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 390 I~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
|.|.-+.... +...+..|+|.+. .+.|+++.+++.+.+.
T Consensus 459 igvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 459 IGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred ceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 6655332211 2234678999877 7889999999988765
No 352
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=2.7e-10 Score=121.98 Aligned_cols=305 Identities=18% Similarity=0.199 Sum_probs=179.3
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHH---HHHhc-----CCCCeEEEcCCCCCChhhhcccCCC
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETL---MFCLA-----DPGDAFLLPTPYYPGFDRDLKWRPG 155 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~---~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~~g 155 (464)
+|..++...+.+++.+..| .+...+.. +|+.++-... ++... ...++|+++.-.++.....+... |
T Consensus 526 qG~lq~i~elq~~l~eltG----md~~Sl~p-~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~-G 599 (939)
T TIGR00461 526 EGYQELIAQLEKWLCSITG----FDAISLQP-NSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMA-G 599 (939)
T ss_pred HHHHHHHHHHHHHHHHHHC----CCCcccCC-chHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHC-C
Confidence 4556677777777777666 44333333 4444444332 23321 12357999998886655556666 9
Q ss_pred cEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 156 VEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 156 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
++++.++.++ +..+|+++|++.+++ .+.++++|++++|+| +|.+-+ .+++|+++|+++|.++++|.++....
T Consensus 600 ~~Vv~V~~d~--~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 600 MQVVPVNCDQ--DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CEEEEeccCC--CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecChhhC
Confidence 9999999874 457999999999874 234889999999998 888732 38999999999999999999985311
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC----CCccEEEEEEecCHHHHHHHHH--h----------
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS----MPGFRVGMIYSNNERVVSAATK--M---------- 299 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g----~~GlRiG~l~~~~~~~~~~~~~--~---------- 299 (464)
.. . ... +..+..+++.|.+|+|+ ..|--+|++.+... +...+.. +
T Consensus 672 ~~-l----~~P-------------g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~-L~~~lPg~~v~~t~d~~gre 732 (939)
T TIGR00461 672 VG-L----TSP-------------GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH-LIPFLPKHDVVSMITGIGGS 732 (939)
T ss_pred CC-C----CCc-------------cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh-chhhcCCCcccccccCCCCc
Confidence 11 1 110 12256678899999775 34556899988533 3222210 0
Q ss_pred cccCCCC-----h----HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccE-E--EEEecC
Q 037587 300 SSFGLVS-----S----QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGL-F--CWVDMR 366 (464)
Q Consensus 300 ~~~~~~s-----~----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~-f--~~~~l~ 366 (464)
.....++ + +...+...++. .+-+++..+.--.+.+++.+.|.+ ++++.-+ ..|. | +.++++
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG-----~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~ 806 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMG-----NEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLR 806 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEecc
Confidence 0001111 1 11112222222 223445444445566788888876 4444322 2232 1 345665
Q ss_pred cccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCe--EEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 367 HLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGW--FRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~--~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
......+ ....++.++|+ ++|+..-. ..|. ..+. +|.+-+ .+++++++++++|.++-++.+
T Consensus 807 ~~~~~~g-~~~~dIakrL~-d~G~hapt-~~~p--v~g~lmiepTE~-eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 807 PLKAKTG-IEAIDVAKRLQ-DYGFHAPT-LSFP--VPGTLMVEPTES-ESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred chhhhcC-CCHHHHHHHHH-hCCeeccc-cCCc--cCCeEEEEeecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 3211111 22346888887 67998532 3343 2333 455554 588999999999877755444
No 353
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.39 E-value=2.1e-10 Score=115.88 Aligned_cols=348 Identities=14% Similarity=0.111 Sum_probs=177.9
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.+...... +.....|... ...+|-+.+++.+.+..
T Consensus 51 ~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~--------l~~~~~~~~~-~~~~la~~l~~~l~~~~--- 118 (464)
T TIGR00699 51 YLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATT--------LINRPALGNF-PSKDWAKILKEGILKVA--- 118 (464)
T ss_pred EEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHh--------hcccccCCcH-HHHHHHHHHHHhHHhhC---
Confidence 4445566788999865 3333 34667777665211100 0111122211 11233344333222221
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--------------------------CC---CeEEEcCCCCCChhhhcccCCC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--------------------------PG---DAFLLPTPYYPGFDRDLKWRPG 155 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--------------------------~g---d~Vlv~~p~y~~~~~~~~~~~g 155 (464)
+-..+.++++++++|+++.+++.... +| .+|+....+|++....+....|
T Consensus 119 -p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~ 197 (464)
T TIGR00699 119 -PKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTR 197 (464)
T ss_pred -CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcC
Confidence 11236899999999999999887521 11 2699999999776433221111
Q ss_pred c-----------EEEEEecCC-CCCcc-----------cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHH
Q 037587 156 V-----------EIVPIHCSS-SNGFR-----------ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQEL 211 (464)
Q Consensus 156 ~-----------~~~~v~~~~-~~~~~-----------~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l 211 (464)
. .+..+|... ...+. -+++.+++.+++ ...++.+|++.-...-.|... +.+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl 274 (464)
T TIGR00699 198 SKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFF 274 (464)
T ss_pred CccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHH
Confidence 1 111122110 00000 124455555542 233576666653355567766 67889
Q ss_pred HHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHH
Q 037587 212 NHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNER 291 (464)
Q Consensus 212 ~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~ 291 (464)
+++.++|+++|+++|.||+..++ +..+ .+.. .+.. ++ ...+. +.+++|.+|-.| ++++. +.
T Consensus 275 ~~lr~lc~~~g~lLI~DEV~tGf--GrtG-~~fa-~e~~-gv------~~~PD---i~t~gK~lg~gG----~~~~~-~~ 335 (464)
T TIGR00699 275 RKLRDITKKHNVAFIVDEVQTGV--GATG-KFWA-HEHW-NL------DDPPD---MVTFSKKFQTAG----YFFHD-PA 335 (464)
T ss_pred HHHHHHHHHcCCEEEEeeeeeCC--CCCc-chhH-HHhc-CC------CCCCC---EEEehhhhccCC----ccccc-hh
Confidence 99999999999999999999774 3221 1111 1111 00 00022 358899995234 44442 22
Q ss_pred HHHHHHH--hcccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCC--Ceeec-CCccEEEEE
Q 037587 292 VVSAATK--MSSFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAG--IRCLK-SNAGLFCWV 363 (464)
Q Consensus 292 ~~~~~~~--~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--~~~~~-~~~g~f~~~ 363 (464)
+.. ... ....+..++++.+++.+.|+ +.++ .++.+++-+.+++. |.+..+++. +.-.. ..-|+++-+
T Consensus 336 ~~~-~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l-~~~~~~~g~~l~~~---L~~l~~~~~~~i~~vRg~G~Glm~gi 410 (464)
T TIGR00699 336 FRP-NKPYRQFNTWMGDPSRALILREIIQEIKRKDL-LENVAHVGDYLYTG---LEDLQKKYPEFIQNLRGKGRGTFIAW 410 (464)
T ss_pred ccC-CCCcccccCCCCCHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH---HHHHHHhCCCceeeecccCeEEEEEE
Confidence 110 000 11112245555555554443 3222 22232222333222 222222233 11121 134678888
Q ss_pred ecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 364 DMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 364 ~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+++.. .....++..++ ++||++.+. +.+.+||.... +++++++.++++|.+++
T Consensus 411 e~~~~------~~~~~i~~~~~-~~Gvl~~~~------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 411 DTPDE------AKRDKLLKKAR-NNGVNIGGC------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred ecCCH------HHHHHHHHHHH-HCCcEEecC------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 87521 11234566665 679999753 24679999877 79999999999998763
No 354
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.39 E-value=8.8e-11 Score=118.27 Aligned_cols=250 Identities=14% Similarity=0.173 Sum_probs=170.9
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C---CC------eEEEcCCCCCChhhhc
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD-----P---GD------AFLLPTPYYPGFDRDL 150 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~-----~---gd------~Vlv~~p~y~~~~~~~ 150 (464)
+..++.+.+..++.+.++.+ +...=.+|+|+|+++.+.+.+... . +. .|+++.-.|..+..++
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~---~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAP---EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCC---CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 56889999999999887732 334567999999999988766421 1 11 6899998998899888
Q ss_pred ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 151 KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 151 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
..+ |++...+++++. ++.+|++++++++.+....+ +|+-+-++.+||.+ +++++|.++|+++++++.+|.|
T Consensus 175 ~~l-G~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~i---Ddi~~ia~ia~~~~i~lHVDAA 245 (460)
T COG0076 175 RYL-GLGLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSI---DDIEELADIAEEYGIWLHVDAA 245 (460)
T ss_pred HHh-CCCceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCcc---CCHHHHHHHHHHcCCcEEEEcc
Confidence 887 999999998864 78999999999998732111 36667788999998 7899999999999999999999
Q ss_pred cccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCH-HHHHHHHHhcccCC---
Q 037587 231 YSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE-RVVSAATKMSSFGL--- 304 (464)
Q Consensus 231 y~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~-~~~~~~~~~~~~~~--- 304 (464)
|+++.. ... ... +.-. .....-+.-+++|.. ++-..+||++.+++ .+.+.......++.
T Consensus 246 ~GG~~~pf~~~--~~~----~~f~--------l~~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~ 310 (460)
T COG0076 246 FGGFLLPFLEP--DGR----WDFG--------LEGVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFADYYLPGGG 310 (460)
T ss_pred ccceeecccCc--cch----hhcC--------CCCceEEEECccccc-CCCCCceEEEEECHHHhhhhhhcccccCCCCC
Confidence 998653 222 111 1111 113334456999976 57788999999877 44444332222211
Q ss_pred -------CCh-----HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ceeec-CCccEEEEEecCc
Q 037587 305 -------VSS-----QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLK-SNAGLFCWVDMRH 367 (464)
Q Consensus 305 -------~s~-----~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~-~~~g~f~~~~l~~ 367 (464)
.+. +.+++....+. .+-.+++.++.-+..+++.+.|++.| +++.. |.. ..+.+++++
T Consensus 311 ~~~~ti~~sr~~~~~~~~~~~l~~lG-----~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l-~~V~fr~~~ 381 (460)
T COG0076 311 IPNFTILGSRPGRQALALYANLRRLG-----REGYRKLLDRTLELARYLAEELEKLGDFELVNEPEL-PIVAFRLKD 381 (460)
T ss_pred cCceeEeeccchHHHHHHHHHHHHhC-----HhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCcc-ceEEEEcCC
Confidence 111 22222223332 23345556666677788999999986 77654 554 477777754
No 355
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.39 E-value=6.9e-11 Score=118.48 Aligned_cols=167 Identities=16% Similarity=0.225 Sum_probs=124.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..+..+..|+.++ .....+++||++.++..++.+++.+||.||++.+||.+..+.+-.. |+.++++....
T Consensus 72 i~eAqe~aA~~fg---------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glila-Ga~Pvyl~p~~ 141 (557)
T COG1982 72 IKEAQELAARVFG---------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILA-GATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHHHHhC---------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHc-CCceEEecCCC
Confidence 4677777787775 3456889999999999999999999999999999999888876655 99988887654
Q ss_pred CCCc----ccCHHHHHHHHHHHhhcCCce-EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 166 SNGF----RITISALENAYQQAQTLNLKV-KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 166 ~~~~----~~d~~~l~~~i~~~~~~~~~~-~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+..| .++.+.+.+++.+. +.. |+++++|| +-.|.++. +++|++++.+.++|+.+||++.. .++..+
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~----~~~~k~~vitnp-TYdGv~~n---~~~i~~~~~~~~a~v~~deah~~-~~~~~~ 212 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAH----PDAEKLAVITNP-TYDGVCYN---LRKIVELLHHYGAWVLYDEAHPA-HFDFSP 212 (557)
T ss_pred CccccccCCCCHHHHHHHHHhC----hhhheeEEEecC-ccceEeec---HHHHHHHHhhcCceEEhhhcCcc-cccccc
Confidence 4323 46889999888763 234 88999999 77899976 55677777788999999998864 233221
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEE
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIY 286 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~ 286 (464)
..+. ... +.+.+++..|.+|.+ +++..+-.+
T Consensus 213 -~l~~---~~~---------~~~~~~~tqS~HK~l--~alSQaS~i 243 (557)
T COG1982 213 -MLPE---SAL---------NGGADFVTQSTHKLL--AALSQASMI 243 (557)
T ss_pred -cCcc---hhh---------hcCceEEEechhhhh--hhhhhhHHH
Confidence 1111 111 237889999999997 455555443
No 356
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.36 E-value=6.7e-10 Score=111.98 Aligned_cols=290 Identities=16% Similarity=0.187 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh------hhhcccCCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF------DRDLKWRPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~------~~~~~~~~g~~~~~ 160 (464)
..+++.+|++++ . +..+++++++.++.+++.+ +.+||.|++.+..|..| ...++.. |++++.
T Consensus 125 ~~le~~lA~l~g--------a--e~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~-G~~~~~ 192 (454)
T TIGR00474 125 SHVEGLLCELTG--------A--EDALVVNNNAAAVLLALNT-LAKGKEVIVSRGELVEIGGSFRIPDVMEQS-GAKLVE 192 (454)
T ss_pred HHHHHHHHHHhC--------C--CcEEEECCHHHHHHHHHHH-hCCcCEEEECCChhhhhcchhhHHHHHHHc-CCEEEE
Confidence 678888888875 2 2345677777888888855 57999999998664221 2234445 999998
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC--CC--CCCHHHHHHHHHHHhhCCeEEEEeccccccc-
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL--GT--AMTHQELNHLINFSKSKRIHIVSDEIYSGTV- 235 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt--G~--~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~- 235 (464)
++.+. ..+++++++++.+ ++++|++.+++||+ |. .. ++++|+++|+++|+++|+|...+.+.
T Consensus 193 v~~~~----~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~---dl~~I~~la~~~g~~vivD~~sG~l~~ 259 (454)
T TIGR00474 193 VGTTN----RTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEV---SIAELVALGREHGLPVMEDLGSGSLVD 259 (454)
T ss_pred eCCCC----CCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCC---CHHHHHHHHHHcCCeEEEECCCccccc
Confidence 87542 2468889888764 88999999999995 63 43 58889999999999999997633210
Q ss_pred ---cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHH
Q 037587 236 ---FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQ 310 (464)
Q Consensus 236 ---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q 310 (464)
|+-. ..+.+.... ..+..+++.|.+|.+|-+ ..|+++++++ ..+.++..... ..+.-...
T Consensus 260 ~~~~gl~--~~p~~~~~~----------~~GaDiv~fSg~K~LgGp--~~G~i~g~~~-~i~~l~~~~l~r~lr~~k~~l 324 (454)
T TIGR00474 260 LSRYGLP--DEPTVQEVI----------AAGVDLVTFSGDKLLGGP--QAGIIVGKKE-LIERLKKNPLTRALRVDKLTL 324 (454)
T ss_pred chhccCC--CCcccccHh----------HcCCCEEEecCccccCCC--eEEEEEECHH-HHHhhhhchhHHHHhhChHHH
Confidence 1100 001111111 124568889999998534 4899998554 33332211100 01111222
Q ss_pred ----HHHHHHcCCc-hhh----HHHHHHHHHHHHHHHHHHHHHHHhC---CC--eeecCC----ccEEEEEecCcc---c
Q 037587 311 ----YLLSRMLSDK-KFT----CNYMKENRKRLRKRKEMLVSGLKVA---GI--RCLKSN----AGLFCWVDMRHL---L 369 (464)
Q Consensus 311 ----~~~~~~l~~~-~~~----~~~~~~~~~~~~~~~~~l~~~l~~~---g~--~~~~~~----~g~f~~~~l~~~---~ 369 (464)
..+..++... .+. .+.+....+.+.++...+.+.|+.. ++ .+.+.. ||-+--..+|.. .
T Consensus 325 a~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~ 404 (454)
T TIGR00474 325 AALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTL 404 (454)
T ss_pred HHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEE
Confidence 2222222211 110 1223333456666777788888763 22 333322 221111112211 0
Q ss_pred ccCChhHHHHHHHHHHHhcC--eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 370 VSNTFEAEKELWKKIIFEVG--LNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 370 ~~~~~~~~~~l~~~ll~~~g--I~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
.... ....++.. .|++.. |..+ -.++.+.+-+.++.+++++.++++|
T Consensus 405 ~~~~-~~~~~l~~-~lr~~~~~ii~r-------~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 405 TPDG-LSAEKLEA-RLRELPPPIIGR-------IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred ecCC-CCHHHHHH-HHhcCCCCEEEE-------EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 0001 11223444 445555 3333 2367788988888888998888776
No 357
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.36 E-value=4.3e-10 Score=110.63 Aligned_cols=293 Identities=15% Similarity=0.101 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCCh-h-hhcccCCCc-EEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGF-D-RDLKWRPGV-EIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~-~-~~~~~~~g~-~~~~v~ 162 (464)
.++-+.+.+.+.+.++ .+-+.+-++++.|++.+++.++..++ ++|++||+.. .|+.- . ..++.. |+ ++..+.
T Consensus 38 ~~i~~e~~~~L~~l~~--~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~-g~~~v~~l~ 113 (374)
T TIGR01365 38 KEKLAEAIKKTREMLG--VPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQL-KLPDVRVLE 113 (374)
T ss_pred HHHHHHHHHHHHHHhC--CCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhc-CCCCcEEEc
Confidence 4555555555555554 11122236679999999999999998 5899999865 56544 3 445545 88 466665
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.+. +-.++++.++. + +.|++++....||...|.+ +++..+ ++.++|+|.+-+ ++.. +
T Consensus 114 ~~~--g~~~~~~~ve~----------~-~~v~~vhnETSTGv~npv~---~i~~~~--~~~lliVDavSs---~g~~--~ 170 (374)
T TIGR01365 114 AEY--GKLPDLKKVDF----------K-NDVVFTWNGTTSGVRVPNG---DFIPAD--REGLTICDATSA---AFAQ--D 170 (374)
T ss_pred CCC--CCCCCHHHcCC----------C-CCEEEecCCCchheecccc---cccccc--CCCcEEEEccch---hcCC--C
Confidence 432 33578888762 1 1267888888999998753 444322 478999999887 6554 2
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH--------Hh---------------
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT--------KM--------------- 299 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~--------~~--------------- 299 (464)
..+. ...+++.|-.|.+|+|+ .+++++.+++.+.+... .+
T Consensus 171 -l~~d---------------~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 233 (374)
T TIGR01365 171 -LDYH---------------KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFE 233 (374)
T ss_pred -CChh---------------HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhc
Confidence 1211 24467889999998765 36777775555433211 10
Q ss_pred -cccCCCChHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhCC-CeeecC----CccEEEEEecCcc-cc
Q 037587 300 -SSFGLVSSQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVAG-IRCLKS----NAGLFCWVDMRHL-LV 370 (464)
Q Consensus 300 -~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~----~~g~f~~~~l~~~-~~ 370 (464)
..+++++.....++..++. ++.+ -++.+.++++++.+.+++.++++| +.++.. .+...+.+.++.. .+
T Consensus 234 ~~t~~TP~v~~l~a~~~~l~---~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~ 310 (374)
T TIGR01365 234 GSTINTPSMLCVEDWLDALK---WAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAID 310 (374)
T ss_pred CCCCCChHHHHHHHHHHHHH---HHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcccc
Confidence 0111122222333333332 1122 377788888999999999999998 666542 2333444555432 11
Q ss_pred ----cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 371 ----SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 371 ----~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
...++-..++... ++++||.+-+|..- .....|||+.-. ++.++++.++..|.=+.
T Consensus 311 ~~~~~~~~~~~~~~~~~-l~~~gi~i~~G~~~--~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 311 ALDEDAQADFAKELIST-LEKEGVAYDIGSYR--DAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred ccccchhhHHHHHHHHH-HHHCCEEEeccccc--cCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 0011112245444 46779999887643 234679998754 89999999999886443
No 358
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.35 E-value=1.2e-09 Score=107.51 Aligned_cols=351 Identities=14% Similarity=0.136 Sum_probs=185.7
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||-..+ .+.. ..+.+.+++.++... +.....+..+ +.+ -..+|+.|-+....
T Consensus 37 yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~----------l~~~~~~~~t-~~P--a~~LA~~L~~~aP~- 102 (449)
T COG0161 37 YLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDK----------LPHVMFGGFT-HEP--AIELAEKLAELAPE- 102 (449)
T ss_pred EEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHh----------CCchhhcccC-Cch--HHHHHHHHHHhCCC-
Confidence 4445556667775543 3333 456777777765322 1111111111 112 44455555433210
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCCCChhhhcccCCCc-------------EEEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-------DPG-DAFLLPTPYYPGFDRDLKWRPGV-------------EIVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~~g~-------------~~~~v~~ 163 (464)
-+-++|++++|++++++.+++... +|. .+++.-..+|++-.-......|. .+..++.
T Consensus 103 --~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~ 180 (449)
T COG0161 103 --GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPA 180 (449)
T ss_pred --CCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCC
Confidence 124689999999999999998753 232 34888888886533221111120 1112221
Q ss_pred CC---C---CCcc----cCHHHHHHHHHHHhhcC-CceEEEEEeCC--CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SS---S---NGFR----ITISALENAYQQAQTLN-LKVKGVLITNP--SNPLGTAM-THQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~---~---~~~~----~d~~~l~~~i~~~~~~~-~~~~~vil~~P--~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~De 229 (464)
.. . +.+. -..++|++.+.. .+ .++.+ ++.-| .--+|..+ |+.-++++.++|++||+++|.||
T Consensus 181 P~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAA-fI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DE 256 (449)
T COG0161 181 PYAYRRGFFGEGDEEFAEAADELEALILE---HGPETIAA-FIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADE 256 (449)
T ss_pred CcccccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEE-EEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeec
Confidence 11 0 1111 113445555443 45 35554 55556 34478765 45569999999999999999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH--hccc----
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK--MSSF---- 302 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~--~~~~---- 302 (464)
+-.+ |+..+.-|.. . ..+.+--+-+++|.++ .| +.+|.+++ .+.+.+.+.. ...|
T Consensus 257 V~tG--FGRTG~~FA~-----e---------~~gi~PDi~~~aKGLT-~GY~Pl~a~l~-~~~I~~~~~~~~~~~f~HG~ 318 (449)
T COG0161 257 VATG--FGRTGKMFAC-----E---------HAGIVPDILCLAKGLT-GGYLPLSAVLT-SDRIYEAFSDGDAGAFMHGH 318 (449)
T ss_pred ceeC--CCcCchhhhh-----h---------hcCCCCCeeeeccccc-ccchhhHhHhh-hHHHHHHHhcccCCeeccCC
Confidence 9987 5533112111 1 1122222448899886 33 56666666 3344444432 2222
Q ss_pred -CCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHh-C-CCeee--cCCccEEEEEecCcccccCC-
Q 037587 303 -GLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKV-A-GIRCL--KSNAGLFCWVDMRHLLVSNT- 373 (464)
Q Consensus 303 -~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~-g~~~~--~~~~g~f~~~~l~~~~~~~~- 373 (464)
++.++++.+++.+.|+ +.++ ++ +.++.-.++.+.|++ + +-+.+ --.-|++.-+++......+.
T Consensus 319 TYsghPlacAaAla~L~i~e~e~l----~~----~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~ 390 (449)
T COG0161 319 TYSGNPLACAAALANLDILEEEDL----LE----RVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTP 390 (449)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCH----HH----HHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccc
Confidence 2345665555554433 2222 22 223334445555554 1 11111 12456777788865433322
Q ss_pred h-hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 374 F-EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 374 ~-~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+ ......+...+.++|++++|.. ..+=++... +++++++++++++.+.++..
T Consensus 391 f~~~~~~~~~~~~~e~Gl~iRp~g-------~~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 391 FEARVGARVRAAALERGLLIRPLG-------DVIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred hhhhHHHHHHHHHHHCCeEEeecC-------CEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 0 0111233444457899999873 134455444 68999999999999998764
No 359
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.35 E-value=3e-09 Score=113.98 Aligned_cols=214 Identities=14% Similarity=0.125 Sum_probs=123.0
Q ss_pred CceEEEEEeCC--CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 188 LKVKGVLITNP--SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 188 ~~~~~vil~~P--~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
.++.+||+. | ..-.|.++ +++-++++.++|+++|+++|.||++.++.-.+. .+ . .+.. +.
T Consensus 583 ~~iAAvI~E-PviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~--~f-a-~e~~------------gv 645 (817)
T PLN02974 583 GHIAALIIE-PVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV--ES-A-WELL------------GC 645 (817)
T ss_pred CCEEEEEEe-ccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc--hh-h-HHhc------------CC
Confidence 456665554 5 46668765 677899999999999999999999998522222 11 1 1111 11
Q ss_pred EEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH--------hcccCCCChHHHHHHHHHcC---CchhhHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK--------MSSFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRK 332 (464)
Q Consensus 265 vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~--------~~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~ 332 (464)
+--+-+++|.++ .| +.+|.+++ .+.+.+.+.. ....++.++++.+++.+.|+ +.+.. +.+.++..
T Consensus 646 ~PDIi~~gKgLt-gG~~Plaa~l~-~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~-~~l~~~~~ 722 (817)
T PLN02974 646 KPDIACYAKLLT-GGLVPLAATLA-TEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTN-PNLIPPGS 722 (817)
T ss_pred CCCEEeeccccc-CCCCccEEEEE-cHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH-HHHHHHHH
Confidence 122448999998 89 69999999 4455555431 11122356666666655443 43321 12222222
Q ss_pred HHHH-HHHHHHHHHHhCCC-eeecCCccEEEEEecCcccccCCh--hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 333 RLRK-RKEMLVSGLKVAGI-RCLKSNAGLFCWVDMRHLLVSNTF--EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 333 ~~~~-~~~~l~~~l~~~g~-~~~~~~~g~f~~~~l~~~~~~~~~--~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
.+.+ ..+.+.+.|.++.. .=.. .-|+++-+++......... .....+...++.++||+++|.. +.+|+
T Consensus 723 ~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-------nvi~l 794 (817)
T PLN02974 723 RLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-------NVVYL 794 (817)
T ss_pred HHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-------CEEEE
Confidence 2221 12233344444421 1122 3357777887532111111 1123455555437899999742 46887
Q ss_pred Eeec-CCHHHHHHHHHHHHHHH
Q 037587 409 CFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 409 s~~~-~~~e~l~~~l~~l~~~l 429 (464)
.... ++++++++++++|.+.+
T Consensus 795 ~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 795 MCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred eCCCCCCHHHHHHHHHHHHHHh
Confidence 6544 78999999999998865
No 360
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.34 E-value=3.3e-09 Score=107.38 Aligned_cols=280 Identities=12% Similarity=0.088 Sum_probs=149.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhc----------C----CCCeEEEcCCCCCChhhhcccCCCcE-EE--EEec--------
Q 037587 109 PNKLVLTAGSTAANETLMFCLA----------D----PGDAFLLPTPYYPGFDRDLKWRPGVE-IV--PIHC-------- 163 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~----------~----~gd~Vlv~~p~y~~~~~~~~~~~g~~-~~--~v~~-------- 163 (464)
.+.++++++++|++..+++... . .+.+|+...-+|++....+....|.. .. ..|.
T Consensus 103 ~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~ 182 (431)
T TIGR03251 103 LPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDN 182 (431)
T ss_pred cCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCC
Confidence 3689999999999999988652 1 13679999988877653332211211 00 0010
Q ss_pred C----C--CCCcc-------cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 S----S--SNGFR-------ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~----~--~~~~~-------~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
. + ...+. -+++.+++.+.. ...++.+|++.-...-.|.. .+.+.+++|.++|+++|+++|+||
T Consensus 183 p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 259 (431)
T TIGR03251 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDE 259 (431)
T ss_pred CcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0 0 00000 012333333332 23467777665335556754 577889999999999999999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-H------hccc
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-K------MSSF 302 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-~------~~~~ 302 (464)
++.++...+. . .. .+.. + ..+.++ +++|.+ +. .|++.. ++ +.+... . ....
T Consensus 260 V~tG~GrtG~--~-~a-~~~~-g--------v~PDi~---~~gK~~--~~--~g~~~~-~~-i~~~~~~~~~~~~~~~~T 317 (431)
T TIGR03251 260 VQTGVGLTGT--A-WA-YQQL-G--------VQPDIV---AFGKKT--QV--CGIMAG-RR-VDEVADNVFAVPSRLNST 317 (431)
T ss_pred chhccCccch--H-HH-HHhc-C--------CCCCEE---EecccC--cc--ceEEec-ch-HHHhhhhcccCccccCCC
Confidence 9987433221 1 11 1111 0 112333 579986 22 356554 32 211111 0 1112
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccCChhHHHHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELW 381 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~ 381 (464)
++.++++.+++.+.|+--.- ....++.++.-+..++.|.+...+.. +......-|+++.++++.. .....++
T Consensus 318 ~~gnpl~~aaa~a~L~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------~~~~~~~ 390 (431)
T TIGR03251 318 WGGNLVDMVRATRILEIIEE-ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------ADRDEVI 390 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------HHHHHHH
Confidence 23556666665555542110 01122222222222233333223332 3221223366777887531 1222466
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 382 KKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 382 ~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
..++ ++||++.|.. .+.+|++.+. ++++++++++++|.+
T Consensus 391 ~~l~-~~Gvl~~~~g------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 391 RQLY-REGVLLLGCG------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHHH-hCCeEEecCC------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 6665 6799997643 2458988876 789999999999875
No 361
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.33 E-value=3.7e-10 Score=111.66 Aligned_cols=259 Identities=15% Similarity=0.197 Sum_probs=161.2
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCC---CCCcEEEeCChHHHHHHHHHHhcC--------CC-----C-eEEEcCCCCCCh
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKF---DPNKLVLTAGSTAANETLMFCLAD--------PG-----D-AFLLPTPYYPGF 146 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~---~~~~i~it~G~~~al~~~~~~l~~--------~g-----d-~Vlv~~p~y~~~ 146 (464)
....++...+.+++.+.+|.+... ....=++|+|+++++..++.+..+ .| . .|++.+-+|...
T Consensus 75 P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~ 154 (373)
T PF00282_consen 75 PAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSI 154 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THH
T ss_pred cccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHH
Confidence 345788888999999887743111 123567999999999888765421 12 2 466666678778
Q ss_pred hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 147 DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 147 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
..++..+ |+.++.||+++ ++.+|+++|++.+++..+.+..+-+|+.+-....||.+ +++++|.++|+++++|+.
T Consensus 155 ~Kaa~~l-Glg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~---D~l~~i~~i~~~~~~wlH 228 (373)
T PF00282_consen 155 EKAARIL-GLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI---DPLEEIADICEKYNIWLH 228 (373)
T ss_dssp HHHHHHT-TSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB----SHHHHHHHHHHCT-EEE
T ss_pred HHhccee-eeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc---cCHHHHhhhccccceeee
Confidence 8888877 99999999985 56899999999998876665555566667778899998 788999999999999999
Q ss_pred EeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHH-HHHHhccc---
Q 037587 227 SDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-AATKMSSF--- 302 (464)
Q Consensus 227 ~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~~~~~~~~--- 302 (464)
+|.+|++..+-.+ .+.....-++ ...-+..+++|.++ ....+|+++.+++.... .+.....|
T Consensus 229 VDaA~gg~~~~~~--~~~~~~~gi~-----------~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~ 294 (373)
T PF00282_consen 229 VDAAYGGSALLSP--EYRHLLFGIE-----------RADSITIDPHKWLG-VPYGCGVLLVRDKSDLRDAFSINADYLGN 294 (373)
T ss_dssp EEETTGGGGGGHC--TTGGGGTTGG-----------GESEEEEETTTTTS--SSS-EEEEESSGGGHHGGGEEEETCTT-
T ss_pred ecccccccccccc--cccccccccc-----------cccccccchhhhhc-CCccceeEEeecccchHHHhccChhhhcc
Confidence 9999998433222 2222221122 12234569999997 66689999987664332 22100011
Q ss_pred --------------C-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCccEEEEEe
Q 037587 303 --------------G-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL-KSNAGLFCWVD 364 (464)
Q Consensus 303 --------------~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~g~f~~~~ 364 (464)
. ..+. ...++..++.-..+-.+.+++..+...+..+++.+.|++. ++++. ++..+ .+.++
T Consensus 295 ~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~-~vcFr 371 (373)
T PF00282_consen 295 DDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLN-IVCFR 371 (373)
T ss_dssp S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSS-EEEEE
T ss_pred cccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCce-EEEEE
Confidence 0 1222 2222222222222224445666666667778899999887 46665 44554 44443
No 362
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.31 E-value=4.8e-09 Score=99.10 Aligned_cols=311 Identities=14% Similarity=0.119 Sum_probs=176.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPG 155 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g 155 (464)
..|.... ..++.+++++.+- -+-..++++|+++||+++++.... ...-.++....+|.+......-+.+
T Consensus 87 ~~~~~~p-i~~~Ae~L~s~~P--------~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~ 157 (442)
T KOG1404|consen 87 SGYLNPP-IHDLAEALVSKLP--------GDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTG 157 (442)
T ss_pred ccccCCc-HHHHHHHHHHhCC--------CCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccccc
Confidence 3454432 4778888887763 244568999999999999987642 2223566667777665443322223
Q ss_pred cEEEEEecCCC--------------CCcccC-----HHHHHHHHHHHh-hcCCceEEEEEeCC-CCCCCC-CCCHHHHHH
Q 037587 156 VEIVPIHCSSS--------------NGFRIT-----ISALENAYQQAQ-TLNLKVKGVLITNP-SNPLGT-AMTHQELNH 213 (464)
Q Consensus 156 ~~~~~v~~~~~--------------~~~~~d-----~~~l~~~i~~~~-~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~ 213 (464)
......+.+.. +-|.-+ .+.+.+.+++.. ..++..-+.++.-+ ..-.|. -+++.-+++
T Consensus 158 ~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka 237 (442)
T KOG1404|consen 158 LSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKA 237 (442)
T ss_pred CCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHH
Confidence 33332221100 011111 233333332221 22333334455555 444454 367778999
Q ss_pred HHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHH
Q 037587 214 LINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVV 293 (464)
Q Consensus 214 i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~ 293 (464)
..+.|+++|.++|.||+..+ |+..+ .++.+- ..+.+--+-|++|.+| .|+.+|.++. .+++.
T Consensus 238 ~~~~v~k~Ggl~IaDEVqtG--fGRtG-~~wgfe-------------~h~v~PDIvTmAKgiG-nG~Pl~AVvt-t~EIa 299 (442)
T KOG1404|consen 238 AYKVVRKRGGLFIADEVQTG--FGRTG-HMWGFE-------------SHGVVPDIVTMAKGIG-NGFPLGAVVT-TPEIA 299 (442)
T ss_pred HHHHHHHcCCEEEehhhhhc--ccccc-cccccc-------------ccCCCccHHHHHhhcc-CCCcceeeec-CHHHH
Confidence 99999999999999999987 55432 333321 2245555779999999 9999999998 45566
Q ss_pred HHHHHhc-ccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee--cCCccEEEEEecC
Q 037587 294 SAATKMS-SFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA--GIRCL--KSNAGLFCWVDMR 366 (464)
Q Consensus 294 ~~~~~~~-~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~--~~~~g~f~~~~l~ 366 (464)
.-+.+.. .|+ ..++++.+++.++|+--+ ++.+.++. ++.-.+|.+.|.++ +.+++ .-.-|+++-+++-
T Consensus 300 ~v~~~~~~~fnTyggnP~a~avg~aVL~Vik--ee~LqE~a---a~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V 374 (442)
T KOG1404|consen 300 DVLNQKSSHFNTYGGNPVACAVGLAVLKVIK--EENLQENA---AEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELV 374 (442)
T ss_pred HHHHhccccccccCCCchhHHHHHHHHHHHH--HHhHHHHH---HHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEe
Confidence 6555444 333 245666666666655322 22233222 22333344444433 22222 1234688878774
Q ss_pred ccc---ccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 367 HLL---VSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 367 ~~~---~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
... .......- .++.+-.+++|++|--|..++ +.|||+... +|+++++.+++..
T Consensus 375 ~dk~~~~pp~~~~~-~~i~~~cke~Gvlvg~g~i~G----~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 375 SDKSEPKPPATAEG-AVIGEQCKELGVLVGKGGIHG----NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred cccCCCCCcchHHH-HHHHHHHHHhCeeeecccccc----eEEEecCCeeccHHHHHHHHHHH
Confidence 322 11111122 233344468899996665554 389998866 7999997666644
No 363
>PLN02452 phosphoserine transaminase
Probab=99.29 E-value=4.1e-09 Score=103.67 Aligned_cols=289 Identities=15% Similarity=0.139 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEecC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~~~ 164 (464)
.++.+.+.+.+.+.++ ++-+.+-+++..|++.++..+...++.+|+++++...+..+- ...++.. |...+....
T Consensus 51 ~~i~~~~~~~L~~l~~--~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~-g~~~~~~~~- 126 (365)
T PLN02452 51 LSIIQKAEADLRELLD--IPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKY-CKTNVIASG- 126 (365)
T ss_pred HHHHHHHHHHHHHHhC--CCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHh-CCCcEEEec-
Confidence 4555555555555544 111223456778999999999999999999988887765332 2334444 653333321
Q ss_pred CCCCc--ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 165 SSNGF--RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 165 ~~~~~--~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+.++| .+++++++. .++++.|.+++-...||+.+. +++++. ++++|+|.+.+ +... +
T Consensus 127 ~~~~~~~~~~~~~~~~--------~~~~~~v~~~hnETstGv~~~--~~~~i~------~~~lvVDa~Ss---~g~~--p 185 (365)
T PLN02452 127 KDEKYTKIPSVSEWEL--------TPDAKFVHICANETIHGVEFK--DYPDVG------NVPLVADMSSN---FLSK--P 185 (365)
T ss_pred CCCCCCCCCChHHcCC--------CCCCcEEEECCCCCCCcEecC--cccccC------CCeEEEECCcc---ccCc--c
Confidence 11222 345555421 236788888888889999643 233332 37899999887 5443 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-------------HhcccCCCChHH
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-------------KMSSFGLVSSQT 309 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-------------~~~~~~~~s~~~ 309 (464)
.++..+ + + ...|..|.+|.+| +|+++++++.+.+... ....+++++...
T Consensus 186 -idv~~~-------------~-v-~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~ 247 (365)
T PLN02452 186 -VDVSKY-------------G-V-IYAGAQKNVGPSG--VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFG 247 (365)
T ss_pred -cCHHHc-------------C-E-EEEecccccCCCC--eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHH
Confidence 232221 3 2 3369999999888 6888885554422111 011123344444
Q ss_pred HHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhC-CCee--ecC--CccEEEEEecCcccccCChhHHHHHHH
Q 037587 310 QYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVA-GIRC--LKS--NAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~-g~~~--~~~--~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
..++..+++. +.+ -++...++.++..+++.+.|++. |+.. ..+ ...+.+.+.++.. ..+.+|.+
T Consensus 248 i~~l~~aL~~---l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~------~~~~~f~~ 318 (365)
T PLN02452 248 IYMCGLVFED---LLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS------ELEAEFVK 318 (365)
T ss_pred HHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc------hhHHHHHH
Confidence 4444444432 222 36777788888999999999885 6611 111 2445566666542 12335655
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+ +++|+...+|...- +.+|+|+-. ++.++++.+++.++++.+++
T Consensus 319 ~~-~~~g~~~~~G~r~~----gg~R~s~yna~~~~~v~~L~~~m~~f~~~~ 364 (365)
T PLN02452 319 EA-AKAGMVQLKGHRSV----GGMRASIYNAMPLAGVEKLVAFMKDFQAKH 364 (365)
T ss_pred HH-HHCCCcccCCcccc----CceEEECcCCCCHHHHHHHHHHHHHHHHhc
Confidence 54 68899999997542 239999966 89999999999999987764
No 364
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.23 E-value=3e-09 Score=115.44 Aligned_cols=275 Identities=15% Similarity=0.124 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCC--CeEEEcCCCCCChhhhccc---CCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPG--DAFLLPTPYYPGFDRDLKW---RPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~g--d~Vlv~~p~y~~~~~~~~~---~~g~~~~~ 160 (464)
.+++..||++++ ++++|+.++.|+|++...++.++ .++| ++|++++-.|+.+...++. ..|++++.
T Consensus 151 ~~~Qt~ia~LtG--------~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~ 222 (993)
T PLN02414 151 LNYQTMITDLTG--------LPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVV 222 (993)
T ss_pred HHHHHHHHHHhC--------CChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEE
Confidence 456667777765 78999999999999999888776 3444 7899999999987655432 23899998
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+.. + .. +..+..+++.+| |.+|.+. ++++|+++|+++|+++++ .+..- ....-
T Consensus 223 v~~~~~-----~------~~------~~~v~~vlvq~P-~~~G~v~---dv~~I~~~ah~~GaL~iV-aad~l-al~~l- 278 (993)
T PLN02414 223 ADEKDF-----D------YS------SGDVCGVLVQYP-ATDGEVL---DYAEFVKNAHANGVKVVM-ATDLL-ALTML- 278 (993)
T ss_pred ecchhh-----c------cc------cCceEEEEEecC-CCCeEEc---CHHHHHHHHHHcCCEEEE-EECHH-HhcCC-
Confidence 886421 1 00 113445566666 6799995 578899999999999998 43321 11111
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC---CCCccEEEEEEecCHHHHHHHH-Hhc----------------
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF---SMPGFRVGMIYSNNERVVSAAT-KMS---------------- 300 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~---g~~GlRiG~l~~~~~~~~~~~~-~~~---------------- 300 (464)
.+.. ..+..+++++..|.. |..|-+.|++.+.++. .+.+. ++.
T Consensus 279 ---~~pg-------------e~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~-~r~~PgriVG~s~d~~g~~~~~l~L 341 (993)
T PLN02414 279 ---KPPG-------------EWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEY-KRLMPGRIIGVSVDSSGKPALRMAM 341 (993)
T ss_pred ---CCHh-------------hccCcEEEECCCccccCCCCCCCCeeEEEECHHH-HhhCCCcccCcccCCCCCccccccc
Confidence 1211 225678889988886 2345568999985543 32221 000
Q ss_pred ---------ccCCCChHHHHHHHHHcCCc---hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccEEEEEecCc
Q 037587 301 ---------SFGLVSSQTQYLLSRMLSDK---KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGLFCWVDMRH 367 (464)
Q Consensus 301 ---------~~~~~s~~~q~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~f~~~~l~~ 367 (464)
...+.+..+..++.+.+... .+...-+++..+++..+..++.+.|...|+++..+ ..+ -+.++++.
T Consensus 342 qtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~-~vt~~~~~ 420 (993)
T PLN02414 342 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFD-TVKVKCSD 420 (993)
T ss_pred ccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcC-eEEEecCC
Confidence 01122221222222222110 00012255556677778888888898888776432 223 23334431
Q ss_pred ccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 368 LLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 368 ~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
..++.++|+ ++||.++... .+.+|+|+.. .++++++.+++.|..
T Consensus 421 ---------~~~v~~~L~-~~gI~l~~~~------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 421 ---------ADAIADAAA-KVGINLRVVD------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred ---------HHHHHHHHH-HCCCeeEEec------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 124666664 6799876321 3469999987 689999999999874
No 365
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.23 E-value=6.9e-09 Score=96.88 Aligned_cols=330 Identities=14% Similarity=0.173 Sum_probs=208.4
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----CCeEEEcCCCCCChhhh-cc
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP-----GDAFLLPTPYYPGFDRD-LK 151 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~-----gd~Vlv~~p~y~~~~~~-~~ 151 (464)
..|..+.++..|.+++.+.++ -+.++.|.-+..|-..++..+.++ |.+.++++..|....+. .+
T Consensus 73 EAYagsrs~~~L~~avkdifG----------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFG----------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhcC----------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 358777888899999988875 245677877777777777777654 44555666666544433 34
Q ss_pred cCCCcEEEEEecCCCCC--------cccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 152 WRPGVEIVPIHCSSSNG--------FRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~--------~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
.. |..++-++.++..+ ..+|++.|++.|++.... ++..|+++-- |.-.|+..|.+.++++.++|.+++
T Consensus 143 ~n-g~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~--nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ 219 (471)
T COG3033 143 IN-GATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD--NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYD 219 (471)
T ss_pred hc-CCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc--cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcC
Confidence 44 88777777653322 246899999999876433 3445555444 557889999999999999999999
Q ss_pred eEEEEeccccc-cc-cC---CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHH---HHH
Q 037587 223 IHIVSDEIYSG-TV-FD---SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNER---VVS 294 (464)
Q Consensus 223 ~~lI~Deay~~-~~-~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~---~~~ 294 (464)
+.++.|.+-.. -. |- .++..-+++.++..++- .-..-+..|.-|.- +.-+ -|+++..++. +-.
T Consensus 220 ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~-------sYaD~~~mS~KKD~-lvnm-GGfl~~~D~~~fDvy~ 290 (471)
T COG3033 220 IPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMY-------SYADGCTMSAKKDG-LVNM-GGFLCFKDDSFFDVYE 290 (471)
T ss_pred CcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHH-------hhhhhheeeccccc-eecc-ccEEEecCccHHHHHH
Confidence 99999975421 11 11 11123356666655431 01112334666653 2221 1566665542 333
Q ss_pred HHHHh-------cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCc
Q 037587 295 AATKM-------SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRH 367 (464)
Q Consensus 295 ~~~~~-------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~ 367 (464)
..+.. .+++..+.-...+++.-|.+.-- ..|++++.. ...+|.+.|.+.|+++..|.||.-++++..+
T Consensus 291 ~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv~----Qv~YL~~~l~~~GVpi~~paGGHavfvda~~ 365 (471)
T COG3033 291 ECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRVA----QVQYLADGLEEAGVPIVQPAGGHAVFVDAGK 365 (471)
T ss_pred HHHhheEeeccccccCcccchhHHHHHHHHHHhcC-cHHHHHHHH----HHHHHHHHHHhcCCeeEecCCCceEEeehhh
Confidence 33332 23444555455555554543221 344555544 3467889999999999999999888888755
Q ss_pred ccccCC--hhHHHHHHHHHHHhcCeEEeCCCCCCCCC-----------CCeEEEEeec--CCHHHHHHHHHHHHHHHHhh
Q 037587 368 LLVSNT--FEAEKELWKKIIFEVGLNISPGSSCHCNE-----------PGWFRICFAN--ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 368 ~~~~~~--~~~~~~l~~~ll~~~gI~v~pg~~f~~~~-----------~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+..-. ......++..|.++.||-..--..|.... -.-+|+++.. -+.+.++-.++.++++.++.
T Consensus 366 ~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 366 FLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred hcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 432211 12334678888899999977544444311 1369999965 47899999999999988776
Q ss_pred Cc
Q 037587 433 NP 434 (464)
Q Consensus 433 ~~ 434 (464)
..
T Consensus 446 ~~ 447 (471)
T COG3033 446 ED 447 (471)
T ss_pred cc
Confidence 53
No 366
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.21 E-value=2.9e-09 Score=115.92 Aligned_cols=270 Identities=14% Similarity=0.158 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCC--CCeEEEcCCCCCChhhhc----ccCCCcEEEE
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADP--GDAFLLPTPYYPGFDRDL----KWRPGVEIVP 160 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~--gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~ 160 (464)
++++.++++.+ +++.|+.+..+++++...++.++ ..+ +++|++++-.|+.....+ +.. |++++.
T Consensus 125 ~~Qt~la~LtG--------~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~-G~ev~~ 195 (954)
T PRK05367 125 NFQTMVADLTG--------LEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPL-GIEVVV 195 (954)
T ss_pred HHHHHHHHHHC--------CChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhC-CCEEEE
Confidence 45555666654 78999999999999999888776 344 489999999998876543 334 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+. +++ . .++.++++.+| |-+|.+. ++++|++.|+++|+++++|-....+....
T Consensus 196 ~~~~~------d~~------~------~~~~~vlvq~p-~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l~-- 251 (954)
T PRK05367 196 GDAAK------ALD------H------DDVFGVLLQYP-GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLLT-- 251 (954)
T ss_pred ecCcc------CCC------c------ccEEEEEEecC-CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCCC--
Confidence 98642 111 1 15666777787 7899996 58889999999999999986442221111
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC-----CCCCccEEEEEEecCHHHHHHHH-Hhc--------------
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD-----FSMPGFRVGMIYSNNERVVSAAT-KMS-------------- 300 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~-----~g~~GlRiG~l~~~~~~~~~~~~-~~~-------------- 300 (464)
+. . ..+..++++|..|. ||-|| .|++.++++ +.+.+. ++.
T Consensus 252 ----~p----g---------e~GaDi~vgs~qkfg~P~g~GGP~--aGflavr~~-~~r~lpgrivG~s~d~~g~~~~~l 311 (954)
T PRK05367 252 ----PP----G---------EMGADIAVGSAQRFGVPMGFGGPH--AAYFAVRDA-YKRSMPGRIVGVSVDAAGNPALRL 311 (954)
T ss_pred ----Ch----h---------hcCCCEEEeeCcccCCCCCCCCCC--EEEEEECHH-HHhhCCCCeeeeecccCCCccccc
Confidence 11 1 22667888999987 54444 899988543 333221 000
Q ss_pred -----------ccCCCCh---HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ccEEEEEec
Q 037587 301 -----------SFGLVSS---QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN-AGLFCWVDM 365 (464)
Q Consensus 301 -----------~~~~~s~---~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~f~~~~l 365 (464)
...+.|. ....++.+.+--.-+...-+++..++......++.+.|+..|+++..+. .+ -+.+++
T Consensus 312 alqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~-~~~~~~ 390 (954)
T PRK05367 312 ALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFD-TLTVEV 390 (954)
T ss_pred ccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCC-eEEEeC
Confidence 0011111 1111111111000011233556666777777888888887787765321 12 122333
Q ss_pred CcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 366 RHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
+. ...++.++++ ++||.++.- ..+.+|+|+.. .++++++.+++.|.
T Consensus 391 ~~--------~~~~i~~~l~-~~gi~~~~~------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 GG--------DAAAVLARAL-AAGINLRRV------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred CC--------CHHHHHHHHH-HCCceeccc------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 21 1235667765 679998421 14579999987 68999999999997
No 367
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.17 E-value=1.8e-08 Score=98.19 Aligned_cols=332 Identities=13% Similarity=0.102 Sum_probs=186.2
Q ss_pred EEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh
Q 037587 39 IQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGS 118 (464)
Q Consensus 39 i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~ 118 (464)
++|+.+--.+|.+.++++-+...+- ...|...+ +++... .-..++-+.+.+.+++.++ ++-+.+=+++..|+
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~~---~~~g~si~-eisHRs--~~F~~i~~~~~~~Lr~Ll~--~P~~y~Vlfl~Ggg 77 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVEL---PETGLSVL-GMSHRS--SWFSSLLAQAEADLRDLLG--IPDEYGVVFLQGGS 77 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhcc---cccCcccc-cccccc--HHHHHHHHHHHHHHHHHhC--CCCCCeEEEEeccH
Confidence 5666665556666655554443211 11111111 112121 1234455555555665554 21122234566679
Q ss_pred HHHHHHHHHHhcCCCCeEE-EcCCC-CCCh-hhhcccCCCcEEEEEecCCCCC--cccCHHHHHHHHHHHhhcCCceEEE
Q 037587 119 TAANETLMFCLADPGDAFL-LPTPY-YPGF-DRDLKWRPGVEIVPIHCSSSNG--FRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl-v~~p~-y~~~-~~~~~~~~g~~~~~v~~~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+.++..+...|+.+||+++ +...+ |+.- ...++.. | ++..+......+ ..++++.+.. +++.+.|
T Consensus 78 T~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~-g-~v~~~~~~~~~~~~~~p~~~~~~~--------~~d~~~v 147 (364)
T PRK12462 78 SLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRV-A-AMRVVWDGAASGYRTLPSLAELDW--------DARAPFR 147 (364)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhc-C-CceEecCcCCCCCCcCCCHHHhcc--------CCCCcEE
Confidence 9999999999999999665 44444 4322 2224334 5 443333211112 2334455411 2256778
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
.+|+-...||+.++ ++...++.++|+|-+-. +... + ..+. ...++..+.-|
T Consensus 148 ~~t~NETstGv~~~--------~~~~~~~~llvvD~sS~---~~s~--p-id~~---------------~~dvi~agsQK 198 (364)
T PRK12462 148 HYVSNETVEGLQFP--------DAAGLPDSPLIADMSSD---FMSR--P-FDVE---------------AYGMVYAHAQK 198 (364)
T ss_pred EEccCCCCceEecC--------cccccCCCeEEEEcCch---hhCC--C-CChH---------------HccEEEeeccc
Confidence 88877889999886 22223588999998876 4443 1 2211 12466789999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHH-------------HhcccCCCChHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHH
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAAT-------------KMSSFGLVSSQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRK 338 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~-------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~ 338 (464)
.+|.|| ++.++.+++.+.+... ....+++++...-.++..+++.-. ++ -++.+.++.+++.
T Consensus 199 nlgP~G--ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~--~e~GGl~~~~~r~~~ka 274 (364)
T PRK12462 199 NLGPAG--VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIR--DEIGGVHAMRDINARKA 274 (364)
T ss_pred cCCCCc--eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHH--HhccCHHHHHHHHHHHH
Confidence 999888 4667765544322111 112233444444455444433210 22 3566777778888
Q ss_pred HHHHHHHHhCC-Ceee---c-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-
Q 037587 339 EMLVSGLKVAG-IRCL---K-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN- 412 (464)
Q Consensus 339 ~~l~~~l~~~g-~~~~---~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~- 412 (464)
+.+++.+.+.. +... + ..+-+-+.++++.. ..+.+|...+ +++|+...-|..- -|.+|+|+-.
T Consensus 275 ~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~f~~~a-~~~gl~~lkGhr~----vgg~Ras~yna 343 (364)
T PRK12462 275 AMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTLFKEQS-TEAGFCGLSGHRS----IGGIRASLYNA 343 (364)
T ss_pred HHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHHHHHHH-HHCCCccccCCcc----cCceEEEcCCC
Confidence 88999998873 3222 1 22344555565431 2233455554 6789998776542 4569999976
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 037587 413 ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 413 ~~~e~l~~~l~~l~~~l~~~ 432 (464)
++.|.++.+++-++++-+++
T Consensus 344 ~~~e~v~~L~~fm~~f~~~~ 363 (364)
T PRK12462 344 VSEQAVSRLCAFLKDFAIRH 363 (364)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 88999999999999887654
No 368
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=6.4e-08 Score=89.54 Aligned_cols=291 Identities=15% Similarity=0.162 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc------C--CC--CeEEEcCCCCCChhhhcccCCCc
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA------D--PG--DAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~------~--~g--d~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
..+-...++++...+ ..+.|+.+|.+.|+...++.... + |. ..|+....+|.+-.-.+-.+ +.
T Consensus 100 nd~~~~f~~~vt~lf------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~-s~ 172 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLF------GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISL-ST 172 (427)
T ss_pred hhhHHHHHHHHHHhc------CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEe-cC
Confidence 334444555555443 35678888888999998876642 1 22 34555555554322111111 11
Q ss_pred E--------------EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHH-HHHHHHHHHhh
Q 037587 157 E--------------IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQ-ELNHLINFSKS 220 (464)
Q Consensus 157 ~--------------~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~-~l~~i~~~~~~ 220 (464)
+ +..+|.. |.++|+.++++ +++++++ .-| +-..|.+.|+. -++++.++|.+
T Consensus 173 d~ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~-----~~vaaFi-vEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 173 DPDSWDGFGPFLPGVVDKVPYG-------DAEALEVALKS-----PNVAAFI-VEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred CcchhhccCCCCCCcceeeccC-------CHHHHHHHhcC-----CCeeEEE-eeccccccceEeCCchhHHHHHHHHHh
Confidence 1 1222221 68899988875 4666544 456 77888776554 69999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh
Q 037587 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM 299 (464)
Q Consensus 221 ~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~ 299 (464)
|++++|.||+..++.-.+. +... .+ .+ ..+.++ -|.|+++ .| +.+..+++.++ +.-.++..
T Consensus 240 ynvl~I~DEvQTGl~RTGk---~la~-d~-en--------v~PDiv---ilgKalS-GG~~Pvsavl~~~~-im~~~~pg 301 (427)
T KOG1402|consen 240 YNVLLIADEVQTGLARTGK---LLAC-DY-EN--------VRPDIV---ILGKALS-GGVYPVSAVLADDD-IMLNIKPG 301 (427)
T ss_pred hcEEEEehhhhhcccccCc---EEEe-eh-hh--------cCCCeE---EEecccc-CCeeeeEEEEecHH-HHhccCCC
Confidence 9999999999987543332 1110 11 11 112333 3578886 55 67777787443 33323322
Q ss_pred --cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC------CeeecCCccEEEEEecCccccc
Q 037587 300 --SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG------IRCLKSNAGLFCWVDMRHLLVS 371 (464)
Q Consensus 300 --~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g------~~~~~~~~g~f~~~~l~~~~~~ 371 (464)
.+.+..+++..+++.++|+--. ++ .+.++-++.-..|...|.++. +...... |++.-+.+.....
T Consensus 302 eHgsTyggNpLg~~vaiAalevi~--ee---kL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-Gl~~ai~i~~~~~- 374 (427)
T KOG1402|consen 302 EHGSTYGGNPLGCAVAIAALEVIV--EE---KLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-GLLNAIVINPSKT- 374 (427)
T ss_pred ccccccCCChHHHHHHHHHHHHHH--HH---HHHHHHHHHHHHHHHHHHhccccccchhheeecc-ceEEEEEeccccc-
Confidence 2223467777777776665321 12 223333444555666666652 2333333 5777666643211
Q ss_pred CChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 372 NTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 372 ~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
...++.++|..+ +++|++..|.. .+-+|++... +++++++++++.|.+.+.
T Consensus 375 -~~~~aw~~cl~l-k~~g~LAkptH------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 375 -SGQDAWDVCLAL-KENGLLAKPTH------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred -cchhHHHHHHcc-cccccccCCCC------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 113455666665 68899988764 4479999876 799999999999998764
No 369
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=8.9e-08 Score=91.35 Aligned_cols=288 Identities=15% Similarity=0.077 Sum_probs=159.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCC------C--CeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CC----cccCHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADP------G--DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NG----FRITIS 174 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~------g--d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~----~~~d~~ 174 (464)
..+.|.+.|++|+|+..++....+- - ..|+....+|++-.-.+...++.....+|.++- .+ -.-|..
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 6789999999999999998874321 1 248888888876433322211332233322110 00 011678
Q ss_pred HHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhcc
Q 037587 175 ALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDR 253 (464)
Q Consensus 175 ~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~ 253 (464)
.+++.++.. ...+.+||+---.--.|.. ..++.+..|.+.|+++++++|.||+..++.-.+. .-..+++.
T Consensus 195 ~l~k~~~~h---~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~----~~a~e~~~-- 265 (433)
T KOG1401|consen 195 ALEKLFESH---KGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY----GWAQEYFG-- 265 (433)
T ss_pred HHHHHHHhC---CCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch----HHHHHHhC--
Confidence 888888762 2246666665224555543 5678899999999999999999999987532222 11111211
Q ss_pred CcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-----cCCCChHHHHHHHHHc---CCchhhHH
Q 037587 254 NIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-----FGLVSSQTQYLLSRML---SDKKFTCN 325 (464)
Q Consensus 254 ~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-----~~~~s~~~q~~~~~~l---~~~~~~~~ 325 (464)
.+--+.++.|.+| .|+.+|..++ ++.+...+....+ .++.++++..++...+ .++++
T Consensus 266 ----------~~PDI~t~aK~L~-gGlPigA~~v-~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~--- 330 (433)
T KOG1401|consen 266 ----------VTPDITTVAKPLG-GGLPIGATGV-RDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPET--- 330 (433)
T ss_pred ----------cCCcceeehhhcc-CCceeEEEee-hHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHH---
Confidence 1223569999998 9999999998 4445555433222 1235666666655544 45555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHH---hcCeEEeCCCCC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVAG--IRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIF---EVGLNISPGSSC 398 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~g--~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~---~~gI~v~pg~~f 398 (464)
++++.+.-+..++.+.+.+.+.. +... -..|+++.+.+...... +.-.....+...+.. +.||.++|-
T Consensus 331 -~k~vs~~~k~L~~~l~e~~~~~~~~i~g~-~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~--- 405 (433)
T KOG1401|consen 331 -LKNVSKIGKELRKLLDEYLKKTPNSICGG-VGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPI--- 405 (433)
T ss_pred -HHHHHHHHHHHHHHHHHHhccCCCceeee-eeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEecc---
Confidence 44444444555555777776642 2221 23345554443221111 000011111111111 124444440
Q ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 399 HCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 399 ~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
+ -+++. .++|.++++++.+.+.+...
T Consensus 406 ------~-~l~~~-~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 406 ------Y-LLTVE-HTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred ------c-ccccc-CcHHHHHHHHHHHHHHHHHh
Confidence 0 12222 25899999999999887754
No 370
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.13 E-value=8e-09 Score=101.23 Aligned_cols=252 Identities=13% Similarity=0.061 Sum_probs=141.1
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...++|+..+ .+.+ ..|.+.+++++... ............+.+.++++.+.+..+
T Consensus 9 ~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~-------------~~~~~~~~~~~~~~~~~la~~L~~~~p-- 73 (339)
T PF00202_consen 9 YLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQAN-------------KLNYVSFSGFTHPEAAELAEKLAELFP-- 73 (339)
T ss_dssp EEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHH-------------HCSSCSTTTSEEHHHHHHHHHHHHHSS--
T ss_pred EEEECCCCEEEECCCCccceecCCCccccchhHHHHhh-------------hcccccccceeccchhhhhhhhhhccc--
Confidence 4444556678999754 3344 34677777766422 122222223346677777777776542
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCCeEEEcCCCCCChhhhccc------------CCCcEEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-------D-PGDAFLLPTPYYPGFDRDLKW------------RPGVEIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-------~-~gd~Vlv~~p~y~~~~~~~~~------------~~g~~~~~v~~~ 164 (464)
-..+.++++++++++++.+++... . .-.+|+...-+|++....... .....+..+|.+
T Consensus 74 --~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~ 151 (339)
T PF00202_consen 74 --GGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP 151 (339)
T ss_dssp --TTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT
T ss_pred --cccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC
Confidence 245689999999999999998765 1 236899988888764321111 001234555543
Q ss_pred CCCC---cccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 165 SSNG---FRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 165 ~~~~---~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.... ..-..+.+++.+.+. ...++.+|++. | ..-.|. ..+.+.+++|.++|+++|+++|.||++.++.-.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~--~~~~iaavivE-Pi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~ 228 (339)
T PF00202_consen 152 DPAADEEEQACLNALEELIAAL--NADEIAAVIVE-PIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK 228 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH--HGGGEEEEEEE-SSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS
T ss_pred ccchhhhHHHHHHHHHHHHHhh--cCCcEEEEEEe-ccccccCccccccchhhehcccccccccceecccccccccccCC
Confidence 1100 000112233333322 23466655554 5 344564 45677899999999999999999999998532222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHc
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRML 317 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l 317 (464)
. ... +... ..+.++ +++|.++ .|+.+|.++++ +.+.+.+.. ....+..++++..++.+.|
T Consensus 229 --~-~a~-~~~g---------v~PDiv---~~gK~l~-gG~p~sav~~~-~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l 290 (339)
T PF00202_consen 229 --F-FAS-EHYG---------VDPDIV---TFGKGLG-GGLPISAVLGS-EEIMEAFQPGSHGSTFGGNPLSCAAALATL 290 (339)
T ss_dssp --S-SGH-HHHT---------SSSSEE---EEEGGGG-TTSSEEEEEEE-HHHHTTSCTTSSTCTTTT-HHHHHHHHHHH
T ss_pred --c-cce-eccc---------ccCccc---ccccchh-hhhhccccccc-chhhccccccccccccccchHhhhhhhhHH
Confidence 2 111 1111 123333 5679998 88999999984 444443322 1122334566666666555
Q ss_pred C
Q 037587 318 S 318 (464)
Q Consensus 318 ~ 318 (464)
+
T Consensus 291 ~ 291 (339)
T PF00202_consen 291 E 291 (339)
T ss_dssp H
T ss_pred H
Confidence 4
No 371
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=9e-09 Score=97.17 Aligned_cols=311 Identities=15% Similarity=0.180 Sum_probs=179.2
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEE
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIV 159 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~ 159 (464)
|+...-+.++.+.||+|++ ..+.|+...| -..+..++.++++.||.|.+.+-........++.. .-.+.
T Consensus 135 YGt~DvHldlE~~iakF~G---------~E~aivYs~g-F~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlS-RS~i~ 203 (467)
T KOG1358|consen 135 YGTIDVHLDLEKRIAKFMG---------TEDAIVYSYG-FSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLS-RSTIS 203 (467)
T ss_pred cccceeecccHHHHHHhhC---------Ccceeeeccc-cchhhhcchhhhccCcEEEEehhhhHHHHHHHhhh-hheeE
Confidence 6665567889999999997 4566666555 45677788999999999998887665555555443 44455
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHh----hcCC--ceEEEEEeC-CCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQ----TLNL--KVKGVLITN-PSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~----~~~~--~~~~vil~~-P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
.+.- -|.+.++..+.+.. +... .++-.++.. ---+||.+.+ +.+|+++..++..-+|+||.|+
T Consensus 204 ~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~S 273 (467)
T KOG1358|consen 204 YFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLS 273 (467)
T ss_pred EecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccc
Confidence 4442 24566655543321 1111 223334333 3567999876 6667888889999999999998
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--c-C--CCCh
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--F-G--LVSS 307 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~-~--~~s~ 307 (464)
-...+..+......... +..+-.++++|++-+++..| |+.++ +..+.. .+++.. + + ..++
T Consensus 274 fG~lg~~GrGvteH~~v----------~~~~iDiv~~sm~~alas~G---gFc~G-~~~i~~-hQrLSg~~Y~fSAslPp 338 (467)
T KOG1358|consen 274 FGVLGKTGRGVTEHFGV----------PITDIDIVTASMETALASGG---GFCAG-KSFIAD-HQRLSGSGYCFSASLPP 338 (467)
T ss_pred cccccccCccccccCCC----------CccceeeeeecccccccccC---ceeec-ceeeEe-eeeccccceeeeccCch
Confidence 43333321111111111 12356678899999987556 77777 443332 222222 1 1 1223
Q ss_pred HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCC--hhHHHHHHHHH
Q 037587 308 QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNT--FEAEKELWKKI 384 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~--~~~~~~l~~~l 384 (464)
....++..++.-.++ -.+..+.++.....+...|... ++.+....-...+.+.+........ ..--.+++...
T Consensus 339 ~la~aa~~ai~i~~~----~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~ 414 (467)
T KOG1358|consen 339 YLAGAAIKAILIEEW----NPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKC 414 (467)
T ss_pred hhhhhHHHHHHHHhh----CcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHH
Confidence 333333333332221 2233445555556666777665 5666554444456666654322221 11122445555
Q ss_pred HHhcCeEEeCCCCCCC----CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 385 IFEVGLNISPGSSCHC----NEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~----~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+.+ |+++.....--. .-+-.+||++.. .++|+++++.+.|++....
T Consensus 415 i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 415 IAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred Hhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 555 888765443211 112359999977 8999999999999987654
No 372
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.06 E-value=6.2e-07 Score=93.22 Aligned_cols=201 Identities=17% Similarity=0.211 Sum_probs=133.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----C-----------------------
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD----P----------------------- 132 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~----~----------------------- 132 (464)
|....+...+.+.+.+++.+..|. +...=.+|+|+|+++..++.+... |
T Consensus 115 ~e~SP~~t~lE~~vi~~la~l~G~----~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~ 190 (608)
T TIGR03811 115 YESSPATSQMEEEVGKEFATLMGY----KNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMP 190 (608)
T ss_pred cccCchHHHHHHHHHHHHHHHhCC----CCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccc
Confidence 333445678888888998888773 333445889999988876655311 0
Q ss_pred -------------------------C------CeEEEcCCCCCChhhhcccCCCc---EEEEEecCCCCCcccCHHHHHH
Q 037587 133 -------------------------G------DAFLLPTPYYPGFDRDLKWRPGV---EIVPIHCSSSNGFRITISALEN 178 (464)
Q Consensus 133 -------------------------g------d~Vlv~~p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~ 178 (464)
| .+|+++.-.|..+..++..+ |+ .++.+|++ .++.+|+++|++
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~il-GlG~~~vv~VpvD--~~~rmd~~~L~~ 267 (608)
T TIGR03811 191 TKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADII-GIGLDQVIPVPVD--SNYRMDINELEK 267 (608)
T ss_pred cccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHc-CCCcccEEEeecC--CCCcCCHHHHHH
Confidence 0 05788888787788888776 88 58899987 467899999999
Q ss_pred HHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe--EEEEeccccccc---cCCCCCCcc---------
Q 037587 179 AYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI--HIVSDEIYSGTV---FDSPSSSFI--------- 244 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~--~lI~Deay~~~~---~~~~~~~~~--------- 244 (464)
.|++..+.+..+-+|+-+-....+|.+=+.+++.+|++.++++|+ ++.+|.||+++. +..+...+.
T Consensus 268 ~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~ 347 (608)
T TIGR03811 268 IIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVH 347 (608)
T ss_pred HHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccc
Confidence 998766666566667777778999999665555555554477887 699999999842 211100000
Q ss_pred ---------------chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH
Q 037587 245 ---------------SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA 296 (464)
Q Consensus 245 ---------------~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~ 296 (464)
.....+..+ ....-+.-.++|.+. ....+|.++.+++.+...+
T Consensus 348 ~~~~~f~~~~~~l~~~~~~~l~gl--------e~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~ 405 (608)
T TIGR03811 348 AEYGVFTEKKEYISREVYNAYKAI--------SEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVI 405 (608)
T ss_pred ccccccccccccccHhHHHHHhcC--------cCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHH
Confidence 011112211 123334569999875 6677999888777655543
No 373
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.01 E-value=2.1e-07 Score=87.99 Aligned_cols=237 Identities=18% Similarity=0.230 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChhhh----------ccc
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVL---TAGSTAANETLMFCLADPGDAFLLPT-PYYPGFDRD----------LKW 152 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~----------~~~ 152 (464)
+.=|+.+-+.+.+.++ .+.-++ ..++|++|..++..+++|||+++..+ .-|...... ++.
T Consensus 53 D~GRd~le~iyA~vfg------aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e 126 (403)
T PF06838_consen 53 DIGRDKLERIYADVFG------AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE 126 (403)
T ss_dssp -HHHHHHHHHHHHHCT-------SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred CccHHHHHHHHHHHhC------chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence 4557777777777655 232333 25789999999999999999988543 335444333 344
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhC--CeEEEEec
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSK--RIHIVSDE 229 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~De 229 (464)
. |+....+++.+++ .+|.+.++++++. ++|+|++.-. .--+=..++.++++++++++++. ++++++|.
T Consensus 127 ~-Gi~Y~~v~L~~dg--~~D~~~i~~~~~~------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 127 F-GIKYREVPLTEDG--TIDWEAIKKALKP------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp G-T-EEEE--B-TTS--SB-HHHHHHHHHT------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred h-CceeEEEeecCCC--CcCHHHHHHhhcc------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 5 8899999998544 6899999999985 8999988754 33333457889999999999774 79999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCcc--EEEEEEecCHHHHHHHHHhcccCC---
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGF--RVGMIYSNNERVVSAATKMSSFGL--- 304 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~Gl--RiG~l~~~~~~~~~~~~~~~~~~~--- 304 (464)
+|.+|.=..+ +.. . +..++.+|+=|..| .|+ --|||+++.+.+.....++..++.
T Consensus 198 CYGEFvE~~E---P~~---v-------------GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e 257 (403)
T PF06838_consen 198 CYGEFVETQE---PTE---V-------------GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLTAPGIGKE 257 (403)
T ss_dssp TTTTTTSSS----GGG---G-------------T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS-TTTGGG
T ss_pred CcceeccccC---ccc---c-------------chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhcCCccccc
Confidence 9998532222 111 1 45578999999987 553 259999966555555566654431
Q ss_pred ---CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccEEEEEecC
Q 037587 305 ---VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGLFCWVDMR 366 (464)
Q Consensus 305 ---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~f~~~~l~ 366 (464)
.-........-+.-.+.. ..+--+-.-.....|+++|+++.|.. +-....+.+.
T Consensus 258 ~G~t~~~~R~~~QGlFlAP~v--------V~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~ 318 (403)
T PF06838_consen 258 VGATLGTNRLMFQGLFLAPHV--------VGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG 318 (403)
T ss_dssp SS--TTTHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S
T ss_pred cccCcchHHHHHhHHhhchHH--------HHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC
Confidence 111122222222222221 11122233445566778899888743 3344555554
No 374
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.97 E-value=1.8e-07 Score=85.46 Aligned_cols=355 Identities=12% Similarity=0.113 Sum_probs=191.5
Q ss_pred CCCCCCCCCceEEeecccccc--cHHH-HHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 28 PYDQLHNPSGIIQMGLAENQL--SFDL-LESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
.|..+.+....+|.-.|.-+. +.|. ++....++.. +....++- ..+|.+........
T Consensus 39 QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQmat-----------~~tN~RFl----hd~lv~cA~~l~st----- 98 (452)
T KOG1403|consen 39 QYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMAT-----------ISTNNRFL----HDELVQCARTLTST----- 98 (452)
T ss_pred ceeeccCcccHHHHhhhhhhcccCCHHHHHHHHHHHhH-----------hcccchhh----HHHHHHHHHHHhhc-----
Confidence 355555666666655554433 3444 4444444321 12223332 24555544444431
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChhhhccc------CCCc-----EEEEE-ecCC--CC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFDRDLKW------RPGV-----EIVPI-HCSS--SN 167 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~------~~g~-----~~~~v-~~~~--~~ 167 (464)
.| .-+-++++|+++|+.+++++.. .+..|. ++.+..|.+.....-. ..|. +.+.+ |++. .+
T Consensus 99 lP-eLsvc~F~NSGSEANDLALRLAR~ftkhqDv-ItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrG 176 (452)
T KOG1403|consen 99 LP-ELSVCFFVNSGSEANDLALRLARNFTKHQDV-ITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRG 176 (452)
T ss_pred CC-CceEEEEecCCchhhHHHHHHHHhhcccCce-EEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccc
Confidence 11 2346789999999999998874 444454 5555566554322110 0011 11111 1110 01
Q ss_pred Ccc-----------cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH-HHHHHHHHhhCCeEEEEeccccccc
Q 037587 168 GFR-----------ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE-LNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 168 ~~~-----------~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~-l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
.|. .=.+.+++.+.+..+.+.++.+.+-.+-..=.|+++|+.. .+++++..+.+|.+.|.||+.-+
T Consensus 177 K~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvG-- 254 (452)
T KOG1403|consen 177 KFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVG-- 254 (452)
T ss_pred ccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhc--
Confidence 111 1124556666655555556655444444566777776664 88999999999999999999987
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--ccc--CCCChHHHH
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSF--GLVSSQTQY 311 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~--~~~s~~~q~ 311 (464)
|+.-+++++++.-+ +-+--+-++.|.+| .|-.++.++. .+.+.+++..- ..| +..++.+.+
T Consensus 255 FGRvG~hyWafq~y-------------~fiPDIVtmgKpmG-NGhPVa~Vat-tkeIA~Af~atgv~YFNTyGGnPVsCA 319 (452)
T KOG1403|consen 255 FGRVGSHYWAFQTY-------------NFIPDIVTMGKPMG-NGHPVAAVAT-TKEIAQAFHATGVEYFNTYGGNPVSCA 319 (452)
T ss_pred ccccchhhhhhhhh-------------ccccchheecccCC-CCCeeeEEec-cHHHHHHhccccceehhccCCCchhHH
Confidence 54333356553322 33334569999999 9999999988 56677766541 112 125666666
Q ss_pred HHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec--CCccEEEEEecCcc--cccCChhHHHHHHHHH
Q 037587 312 LLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK--SNAGLFCWVDMRHL--LVSNTFEAEKELWKKI 384 (464)
Q Consensus 312 ~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~g~f~~~~l~~~--~~~~~~~~~~~l~~~l 384 (464)
+..++++ ++.+ .++..++- +....+...++. ..++.. -..|+|+-+++-+. ...++.+.+.-+..+|
T Consensus 320 v~laVm~v~e~E~L-q~ha~~vG----~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rl 393 (452)
T KOG1403|consen 320 VGLAVMRVCEDENL-QEHAQQVG----EKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRL 393 (452)
T ss_pred HHHHHHHHHhhhhH-HHHHHHHH----HHHHHHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHH
Confidence 6555544 3332 33333333 222222222322 122221 24578999988543 2223334444566777
Q ss_pred HHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 385 IFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
-+.++|++..-. ...+-+.|-..- .+++..++.+..|.+++.-
T Consensus 394 ke~y~VLlsaDG----Ph~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 394 KELYRVLLSADG----PHRNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred HHhhhEEEecCC----CCCceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 777889986321 123444442211 3677778887777777653
No 375
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.90 E-value=6e-07 Score=86.37 Aligned_cols=317 Identities=16% Similarity=0.213 Sum_probs=182.5
Q ss_pred ccccccCCCC---CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHH--HHHHHh-cCCC----CeEEEcCCCC
Q 037587 74 FRELALFQDY---HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANE--TLMFCL-ADPG----DAFLLPTPYY 143 (464)
Q Consensus 74 ~~~~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~--~~~~~l-~~~g----d~Vlv~~p~y 143 (464)
+..++-|.|. +|+.++...+.++|.+..| .+.-.+-..+|++.=.. ++++++ -..| +.+|+|+-.+
T Consensus 92 f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG----~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAH 167 (496)
T COG1003 92 FANIHPFQPEEQVQGYLELIYELQEWLKEITG----MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAH 167 (496)
T ss_pred hhhcCCCCChHHHHHHHHHHHHHHHHHHHhcC----CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeecccc
Confidence 3455555543 5788899999999988765 33333334455544332 223333 2233 6899999988
Q ss_pred CChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 144 PGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 144 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
+.-...+... |.+|+.|++++++ .+|+++|++.+.+ ++.++.++|| |-.|.. .+.+++|+++..++|.
T Consensus 168 GTNPASAam~-G~~VV~V~~~~~G--~VDlddLk~k~~~------~~AalMiTnP-sT~GvF--E~~I~ei~~ivH~~Gg 235 (496)
T COG1003 168 GTNPASAAMA-GFKVVVVKCDENG--NVDLDDLRAKAED------NLAALMITNP-STLGVF--EEDIREICEIVHEAGG 235 (496)
T ss_pred CCChhhHhhc-CceEEEEecCCCC--CccHHHHHHHhcc------ceeEEEeccC-cccccc--hhhHHHHHHHHHHcCC
Confidence 8655555554 9999999998644 6999999998875 8999999999 556754 4679999999999999
Q ss_pred EEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHHH-
Q 037587 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAATK- 298 (464)
Q Consensus 224 ~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~~- 298 (464)
.+..|.+-..-..+-. . +. +-+-.++=--++|+|..| |-..|=|.. .+.+...+..
T Consensus 236 ~vY~DGANlNA~vG~~--r-PG---------------d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgV-k~~L~pfLP~p 296 (496)
T COG1003 236 QVYYDGANLNAIVGLA--R-PG---------------DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGV-KAHLAPFLPGP 296 (496)
T ss_pred EEEecCcchhhhhccc--c-cc---------------ccccceEEeecccccccCCCCCCCCCCceeh-HhhccccCCCC
Confidence 9999988754333321 0 00 112223233667777432 333443332 1222111110
Q ss_pred ---------------------hcccCCCChHH--HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec
Q 037587 299 ---------------------MSSFGLVSSQT--QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK 354 (464)
Q Consensus 299 ---------------------~~~~~~~s~~~--q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~ 354 (464)
...++...++. ..+-..++... -+++.-+.---+..++.+.|+.. .+.+.+
T Consensus 297 ~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~-----GL~~ase~AvLNANYia~rL~~~y~~~y~~ 371 (496)
T COG1003 297 VVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGAD-----GLKQASEVAVLNANYIARRLKGYYPVPYTG 371 (496)
T ss_pred cccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHH-----HHHHHHHHHHHhHHHHHHHhhhcCccccCC
Confidence 11111111111 11122222222 23333333333557788888763 232222
Q ss_pred C--CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 355 S--NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 355 ~--~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
. ... =+.++......... ....+++++|+ ++|+.- |.-+|...-.+.+=|=.+- .+++++++++++|.++.++
T Consensus 372 ~~~~~H-E~ild~r~l~~~~G-v~~~DvAKrLl-D~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 372 ENRVAH-ECILDARPLKKETG-VRALDVAKRLL-DYGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred CCccee-EEEeechHhHhhcC-CcHHHHHHHHH-hcCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2 121 12244432221111 23446889988 679885 6666764445666665544 5789999999999998877
Q ss_pred hCc
Q 037587 432 CNP 434 (464)
Q Consensus 432 ~~~ 434 (464)
.+.
T Consensus 448 a~~ 450 (496)
T COG1003 448 ADA 450 (496)
T ss_pred HHh
Confidence 764
No 376
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=3.9e-06 Score=79.01 Aligned_cols=302 Identities=18% Similarity=0.173 Sum_probs=165.8
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCC----cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh-hcccCCCc---
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPN----KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR-DLKWRPGV--- 156 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~-~~~~~~g~--- 156 (464)
|-.++...+-.+-+++.=.-..++|+ ||-.-+|+. |+..+..+++.|+++|.-.+.-.+++.. ....- +.
T Consensus 79 GGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-ANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~-~kkIS 156 (477)
T KOG2467|consen 79 GGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-ANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTP-TKKIS 156 (477)
T ss_pred CcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hhhHHHhhhcCCCCeeeeccCCCCCccccccccC-Cceee
Confidence 33555555444333221000125665 566666665 6667778999999998855443332211 11111 11
Q ss_pred ------EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 157 ------EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 157 ------~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
+-.++.++++.+ -+|.|.|++....+ ++++||.- - .-....++..++++ +|.+.|.+++.|-+
T Consensus 157 a~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~f-----rPk~iiaG-~-SaY~R~~DYaR~R~---Iad~~gA~Lm~DMA 225 (477)
T KOG2467|consen 157 ATSIYFESMPYKVDPSTG-YIDYDKLEKTATLF-----RPKLIIAG-T-SAYSRLIDYARFRK---IADKVGAYLMADMA 225 (477)
T ss_pred eeeeecccCceeeCCCCC-ceehHHHHHHHHhc-----CCcEEEec-c-ccchhhccHHHHHH---HHHhcCceeehhhh
Confidence 122344555554 47999999987765 88865542 1 22223444445544 55577899999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecC-----------H---HHHHHH
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN-----------E---RVVSAA 296 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~-----------~---~~~~~~ 296 (464)
+........ ..++..++ ..|+..|.+|.+ -|-|-|.|.-+. + ++.+.+
T Consensus 226 HISgLVAA~--vipsPFey--------------~DiVTTTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kI 287 (477)
T KOG2467|consen 226 HISGLVAAG--VIPSPFEY--------------CDIVTTTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKI 287 (477)
T ss_pred hHHHHHhcc--cCCCcccc--------------cceeeccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhh
Confidence 964333322 22232222 447788999986 788888876432 1 112222
Q ss_pred HHhccc---CCCChHHHHHHHHHcC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcc-
Q 037587 297 TKMSSF---GLVSSQTQYLLSRMLS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHL- 368 (464)
Q Consensus 297 ~~~~~~---~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~- 368 (464)
+...-+ +.+......+++.+|. .++| .+..++..++.+.|.+.|.+.|.++.. ...+..+.+++...
T Consensus 288 NfaVFP~lQGGPHNhtIaalAvALkQa~tpef-----k~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G 362 (477)
T KOG2467|consen 288 NFAVFPGLQGGPHNHTIAALAVALKQAMTPEF-----KEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKG 362 (477)
T ss_pred hhhccccccCCCCcchHHHHHHHHHhhCCHHH-----HHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccC
Confidence 211111 1111222333333333 3454 334445556778889999999998764 34466778888653
Q ss_pred cccCChhHHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeecC-----CHHHHHHHHHHHHHHHH
Q 037587 369 LVSNTFEAEKELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFANI-----TEETLQVALQRIKVFAQ 430 (464)
Q Consensus 369 ~~~~~~~~~~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~~-----~~e~l~~~l~~l~~~l~ 430 (464)
.++. -++++++..+|... ||..-. ..++.+||....+ -++++++..+-|.++++
T Consensus 363 ~dGa-------rvE~vle~~~I~~NKNtvpGD~Sa-l~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 363 VDGA-------RVEKVLELCHIALNKNTVPGDKSA-LSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CchH-------HHHHHHHHhhhhhcCCcCCCCccc-cCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 3332 23444544555543 444322 2467799976442 47888887777776654
No 377
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.81 E-value=6.5e-06 Score=76.50 Aligned_cols=292 Identities=14% Similarity=0.110 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCC-CCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPY-YPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~-y~~~~~~~~~~~g~~~~~v~~ 163 (464)
-++-+.|...+....| ..+.+++++++++-.++.++.+.++ +|++|++++-. |+.=...+.- -+++...-.
T Consensus 75 ~~lp~~lgdklApLiG----A~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g--~~~~~~~~~ 148 (407)
T COG3844 75 FDLPERLGDKLAPLIG----ARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEG--LADLLGIGY 148 (407)
T ss_pred hhchhHHHHHhhhhhc----CCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcc--hhhhhcccc
Confidence 3444445555443323 6789999999999999998888754 47888877643 4321111110 111211111
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+- ...+.++++++++.+ ++.+|++++.+--||+.++ +.+|-.++.++|++++.|-+++...+.
T Consensus 149 ~~--~~~~~P~~~~~~~~d------d~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGavp------ 211 (407)
T COG3844 149 DL--EGVIAPRALEEAITD------DVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGAVP------ 211 (407)
T ss_pred cc--eeeeChHHHHHhhcc------ceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCCcc------
Confidence 11 122456788888765 8888888888999999974 777888889999999999999743221
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhccc--------------------
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSF-------------------- 302 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~-------------------- 302 (464)
.. + +..+..+-+++-.|-+. =||-..|..+. ++........+..+
T Consensus 212 ~~---L----------h~~gaDfaigcsyKYLNgGPGapa~l~v~-~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~ 277 (407)
T COG3844 212 VD---L----------HAAGADFAIGCSYKYLNGGPGAPAGLFVA-PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGAR 277 (407)
T ss_pred ee---e----------cccCCCeeeeeeceeccCCCCCceeEEec-cccccccccccccccCCCCcchhhhccCcCcccc
Confidence 11 1 13356677888899872 26644443333 22221111111111
Q ss_pred ----CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCC----ccEEEEEecCcccc
Q 037587 303 ----GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSN----AGLFCWVDMRHLLV 370 (464)
Q Consensus 303 ----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~----~g~f~~~~l~~~~~ 370 (464)
.+.+..+..++...|+-.. +--+.+.|+.--...+++++.++.. ++++..|. -|-.+.+.-|.
T Consensus 278 rf~~gt~~V~s~aal~~aLDifa--~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~--- 352 (407)
T COG3844 278 RFLCGTQPVLSLAALEGALDIFA--DVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH--- 352 (407)
T ss_pred ceeeCCcchhhhHHHhhhhhhhh--hcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc---
Confidence 1223344444444444222 1125566665555667777766654 44444332 12244444442
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++.+.| .++||..- | ..++-+|+.++- ++-+++=.+++.|.+++++.-
T Consensus 353 ------~~~V~qaL-i~rGVigD----~--R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 353 ------GYQVMQAL-IDRGVIGD----F--REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ------HHHHHHHH-HHcCcccc----c--cCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 12355555 57899852 2 247889999975 577899999999999998653
No 378
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.73 E-value=5.1e-06 Score=89.70 Aligned_cols=259 Identities=15% Similarity=0.171 Sum_probs=152.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChhhhcc---cCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDRDLK---WRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
++..|.-+-.+++++-..++.+.. +++++|++++-.|+.+...++ ...|++++.++ +++|+..+
T Consensus 124 m~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~ 193 (939)
T TIGR00461 124 LPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV 193 (939)
T ss_pred CChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC
Confidence 677788888898888887776642 234789999999988775544 22388888764 33444332
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
++.++++.+| |-+|.+ +++++|+++++++|.+++++---.. .... .+..
T Consensus 194 --------~~~~v~~q~P-n~~G~i---ed~~~i~~~~h~~gal~~~~ad~~a--l~ll----~~Pg------------- 242 (939)
T TIGR00461 194 --------DVFGCLLQYP-ATDGSI---LDYKQLIDALHSHKSLVSVAADLMA--LTLL----TPPG------------- 242 (939)
T ss_pred --------CEEEEEEECC-CCCeEE---ecHHHHHHHHHHcCCEEEEEechHH--hCCc----CCHH-------------
Confidence 4567888999 678988 4789999999999999988432221 1111 1111
Q ss_pred CCCcEEEEcCCCcCCCC----CccEEEEEEecCHHHHHHHH----------------------------HhcccCC-CCh
Q 037587 261 LWSRIHIVYSLSKDFSM----PGFRVGMIYSNNERVVSAAT----------------------------KMSSFGL-VSS 307 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~----~GlRiG~l~~~~~~~~~~~~----------------------------~~~~~~~-~s~ 307 (464)
..+-.|++ +.+|.||+ .|--.|++.++++ +.+.+. +.....+ ++.
T Consensus 243 e~GaDi~v-g~~q~fg~p~g~GGP~aG~~a~~~~-l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~ 320 (939)
T TIGR00461 243 HYGADIVL-GSSQRFGVPMGYGGPHAAFFAVKDE-YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTA 320 (939)
T ss_pred HcCCcEEe-eCCCccCCCCCCCCCceeeeeecHh-hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHH
Confidence 12334443 34444443 2444677766432 222210 0000010 111
Q ss_pred HHHHHHH-HH-cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEE--EEecCcccccCChhHHHHHHHH
Q 037587 308 QTQYLLS-RM-LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFC--WVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 308 ~~q~~~~-~~-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~--~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
....++. .+ +.. +-.+-+++.-++...+..++.+.|.+.|+++..+ .+|= .++++. ....++.+.
T Consensus 321 qaL~a~~a~~Y~~~--~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~--~fF~~~~v~~~~-------~~~~~i~~~ 389 (939)
T TIGR00461 321 QVLLANVASSYCVY--HGPKGLKNIARRIHSLTSILANGLENDPHELINK--TWFDTLTVKVGN-------GISSELLKA 389 (939)
T ss_pred HHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--CccceEEEEeCC-------CCHHHHHHH
Confidence 1111111 11 111 1133456666666777788899999999887543 3442 233321 012246666
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
++ ++||.++.. ..+.+++|+.. .++++++.+++.+.
T Consensus 390 ~~-~~gi~l~~~------~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 390 AE-EFNINLRAV------DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HH-HCCCeeeec------CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 65 679998752 24579999977 68899999999885
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.64 E-value=6.5e-06 Score=79.62 Aligned_cols=298 Identities=15% Similarity=0.147 Sum_probs=154.4
Q ss_pred CcEEEeCChHH-HHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTA-ANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~-al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~ 185 (464)
...++.+.+|. .+.+.+.++. ..++.|+.+.-.+....-++... |.+++.++...+ +....|++.+++.+++.
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~A-Gl~~~vV~~~~~~d~l~td~~~ie~~i~~~-- 151 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERA-GLEPVVVENVLEGDELITDLEAIEAKIEEL-- 151 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHT-T-EEEEE-EEEETTEEEEHHHHHHHHHHHH--
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhc-CCeEEEeeccCCCCeeeccHHHHHHHHHHh--
Confidence 34556655543 3334444443 45688888877655455555556 999998885322 33455688888888653
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
+....+++++.++--.|..- +++++|+++|+++|+..|+..||+- -.. ......+-.-+. ....
T Consensus 152 -G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgv---Q~~--~~~~~i~~a~~~--------GRvd 215 (389)
T PF05889_consen 152 -GADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGV---QSS--KCMHLIQQAWRV--------GRVD 215 (389)
T ss_dssp -CGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTT---T-H--HHHHHHHHHHHH--------STCS
T ss_pred -CCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhh---hHH--HHHHHHHHHHhc--------CCcc
Confidence 55667778887754455542 4699999999999999999999972 111 111111111111 1233
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCC--chhhHHHHHHHHHHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSD--KKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
+++.|+-|.| +-+..-+.+.++++..........+--...++.......++.- ..| ...+.++.+.+....+++.+
T Consensus 216 a~vqS~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~-~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 216 AFVQSTDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGY-GALLKERKASFPYLKERLKK 293 (389)
T ss_dssp EEEEEHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHH
Confidence 5688999999 3443346666666655554444322211233334444444432 223 33444444444444444444
Q ss_pred HHHhCCCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeE----EeCCCCCCC---C--CCCeEEEEeec-
Q 037587 344 GLKVAGIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN----ISPGSSCHC---N--EPGWFRICFAN- 412 (464)
Q Consensus 344 ~l~~~g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~----v~pg~~f~~---~--~~~~~Ris~~~- 412 (464)
.-++.+-.+.. |.-..-+.+.++....... .+.-.+.. +|..+||. |.|+..+.- . ...|+-++-+.
T Consensus 294 ~aee~~e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs-~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG 371 (389)
T PF05889_consen 294 WAEEVGERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGS-MLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIG 371 (389)
T ss_dssp HHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHH-HHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT
T ss_pred HHHHhhhhhcCCCCCCeeEEEECccchhhcc-chhhhHHH-HHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhC
Confidence 44445544443 2222334455554322221 22223444 44566765 333322211 0 12578774443
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 037587 413 ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 413 ~~~e~l~~~l~~l~~~l~ 430 (464)
+++|+++.++++|+++++
T Consensus 372 ~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 372 MTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhC
Confidence 799999999999999875
No 380
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.55 E-value=2.1e-05 Score=77.95 Aligned_cols=261 Identities=19% Similarity=0.246 Sum_probs=130.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChhhh----cccCCCcEEEEEecCCCCCcccCHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPIHCSSSNGFRITISALENA 179 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 179 (464)
++..|.-+-.|++.+-..++.+. -+..++|+++.-.|+.+... +... |++++.++.++.+ ..|
T Consensus 125 mdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~-g~~iv~~~~~~~~--~~d------- 194 (429)
T PF02347_consen 125 MDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPL-GIEIVEVPLDEDG--TTD------- 194 (429)
T ss_dssp SSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHC-CEEEEEE-BBTTC--SB--------
T ss_pred CCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhC-CeEEEEecccccC--Ccc-------
Confidence 55455566677776666554443 23346999999999988764 3334 8999999987533 122
Q ss_pred HHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCC
Q 037587 180 YQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259 (464)
Q Consensus 180 i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (464)
+.++.+|++.+| |-.|.+ +++++|.++++++|.++++ .+.- .....- .+..
T Consensus 195 -------~~~~a~v~vq~P-n~~G~~---ed~~~i~~~~h~~gal~~~-~ad~-~aL~~l----~~Pg------------ 245 (429)
T PF02347_consen 195 -------DDDTAAVMVQNP-NTFGVF---EDIKEIADIAHAAGALVIV-GADP-NALGGL----KSPG------------ 245 (429)
T ss_dssp -------STTEEEEEEESS--TTSB-----THHHHHHHHHHTT-EEEE-CGGC-CGCCTC------GG------------
T ss_pred -------ccCeEEEEeecC-CCCceE---eeHHHHHHHHHHcCCEEEE-ecCH-HHHhCc----CChh------------
Confidence 138999999999 678988 5699999999999988875 3321 112211 1111
Q ss_pred CCCCcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHH----------------------------Hh--cccCCC
Q 037587 260 DLWSRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAAT----------------------------KM--SSFGLV 305 (464)
Q Consensus 260 ~~~~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~----------------------------~~--~~~~~~ 305 (464)
..+-.|++++ +|.||.| |--.|++.+..+ +.+.+. +- .+....
T Consensus 246 -e~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIct 322 (429)
T PF02347_consen 246 -EYGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICT 322 (429)
T ss_dssp -GGT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---S
T ss_pred -hcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhhCCCceecccccccccceeeeccccccccccccchhhhhhh
Confidence 2244455655 7777643 556788877543 222211 11 111111
Q ss_pred Ch-HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHH
Q 037587 306 SS-QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 306 s~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
+. +...++...+.. +-.+-+++.-+....+..++.+.|.+. +..+..+.-.-|+....+. ....++.++
T Consensus 323 nqaL~A~~a~~Yl~~--~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~-------~~~~~l~~~ 393 (429)
T PF02347_consen 323 NQALLALAAAIYLAY--LGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD-------KEVEELLKR 393 (429)
T ss_dssp S-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS--------HHHHHHHHT
T ss_pred hHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc-------HHHHHHHHH
Confidence 22 111122222221 114567777888888999999999986 4443322221123333221 111123333
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
.+ ..|+... ....+.+-+|+.- .++++++.+++.+
T Consensus 394 ~~-~~gl~~~------~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 394 GI-EGGLNLR------YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp T-----EEEG------GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HH-hcCCCcc------ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 33 2354332 1234578888876 5789999888764
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.52 E-value=3.8e-05 Score=74.41 Aligned_cols=177 Identities=16% Similarity=0.177 Sum_probs=118.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEE-----EcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFL-----LPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vl-----v~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
..+.++++|..+.++.+++.++..++..|+ ++ ++.+.....++.. |++++.+-... .-...+++.+|.+
T Consensus 82 ~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~a-G~~l~EvG~tn----~t~~~d~~~AIne 155 (395)
T COG1921 82 GAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLA-GAKLVEVGTTN----RTHLKDYELAINE 155 (395)
T ss_pred chhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHc-CCEEEEecccC----cCCHHHHHHHhcc
Confidence 367899999999999999999987555444 34 5666778888877 99999987542 2467889998876
Q ss_pred HhhcCCceEEEEEeCCCCC--CCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNP--LGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NP--tG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
++++++-+.-+|- +|. ++ .++++++|+++++++|+|.+-.... +.. +.+..+++
T Consensus 156 ------~ta~llkV~s~~~~f~~~-l~---~~~l~~ia~~~~lpvivD~aSg~~v-~~e----~~l~~~la--------- 211 (395)
T COG1921 156 ------NTALLLKVHSSNYGFTGM-LS---EEELVEIAHEKGLPVIVDLASGALV-DKE----PDLREALA--------- 211 (395)
T ss_pred ------CCeeEEEEeecccccccc-cc---HHHHHHHHHHcCCCEEEecCCcccc-ccc----cchhHHHh---------
Confidence 7777766655542 222 33 5567888889999999999886532 212 22222322
Q ss_pred CCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcC
Q 037587 261 LWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLS 318 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~ 318 (464)
.+..++++|-.|.+ .|.+-|.+++ +++++..+++..- ...+.....+++.++|+
T Consensus 212 -~GaDLV~~SgdKll--gGPqaGii~G-kKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 212 -LGADLVSFSGDKLL--GGPQAGIIVG-KKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred -cCCCEEEEecchhc--CCCccceEec-hHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 15667889999998 5778999999 4555555544321 12345555555544443
No 382
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.40 E-value=2.8e-05 Score=71.45 Aligned_cols=179 Identities=21% Similarity=0.276 Sum_probs=114.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCC--cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChhhh----------cc
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPN--KLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPGFDRD----------LK 151 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~----------~~ 151 (464)
|.+.|.+..|+-++ .+.. ..-+ -+++++|..++..+++|||..+...-. |....+. ++
T Consensus 66 GRdtLe~vyA~vf~--------aE~a~VRpq~-isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~ 136 (416)
T COG4100 66 GRDTLERVYAQVFG--------AEAALVRPQI-ISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLK 136 (416)
T ss_pred chhHHHHHHHHHhc--------cccceeeeee-ecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHH
Confidence 54556666666554 2222 2223 356789999999999999998755332 4333322 33
Q ss_pred cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhC--CeEEEEe
Q 037587 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSK--RIHIVSD 228 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~D 228 (464)
.. |+....+|+..++ .+|.+.+...+++ ++|+|.+.-. .-.-=-.++.+++++++.+.++- ++++++|
T Consensus 137 df-gi~Y~~v~Lt~~g--kiD~~~v~~~i~~------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD 207 (416)
T COG4100 137 DF-GIKYKAVPLTADG--KIDIQAVKTAISD------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD 207 (416)
T ss_pred Hh-CcceeecccccCC--cccHHHHHHhcCc------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe
Confidence 33 7778888887543 6899999999876 8998877643 11111136779999999998774 7999999
Q ss_pred ccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE--EEEEEecCHHHHHHHHHhcc
Q 037587 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR--VGMIYSNNERVVSAATKMSS 301 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR--iG~l~~~~~~~~~~~~~~~~ 301 (464)
.+|.+|.-..+| .. -+..+.-+|+-|.-| .|+- -||+.+..+.+.+..-++..
T Consensus 208 NCYGEFvE~~EP---t~----------------vGaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~yRlTa 262 (416)
T COG4100 208 NCYGEFVEEKEP---TH----------------VGADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAAYRLTA 262 (416)
T ss_pred ccchhhhhccCc---cc----------------cchhhhccceeeCCC-CceeeccceeechHHHHHhhceeeec
Confidence 999985333221 11 133456788888876 4432 37888865555444444433
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.37 E-value=0.00035 Score=68.18 Aligned_cols=313 Identities=12% Similarity=0.169 Sum_probs=165.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCC-----C-CCCcEEEeCChHHHHHHHHHHh-------cCCC-----------C-eEEEcC
Q 037587 86 FPDAKKELVKLMARIRGNKVK-----F-DPNKLVLTAGSTAANETLMFCL-------ADPG-----------D-AFLLPT 140 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~-----~-~~~~i~it~G~~~al~~~~~~l-------~~~g-----------d-~Vlv~~ 140 (464)
..+|...+.+|+++..+.+.. . ++.-|+- ..++++...++.+. .+.+ + .+...+
T Consensus 111 ~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SD 189 (511)
T KOG0628|consen 111 CTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSD 189 (511)
T ss_pred hHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecC
Confidence 467887788888876553211 0 1123333 34445544444332 1122 1 344556
Q ss_pred CCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh
Q 037587 141 PYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220 (464)
Q Consensus 141 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~ 220 (464)
-++.+...++... |++...++.+. +|.++.+.|+++|++-.+.|--+ .+++.+-. -|| +-+.+++.+|..+|++
T Consensus 190 qahssveka~~i~-~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIP-f~v~at~G-TT~-~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 190 QAHSSVEKACLIA-GVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIP-FFVCATLG-TTS-SCAFDELEELGPVCRE 263 (511)
T ss_pred cccchHHHhHhhc-ceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCcc-EEEEEeec-Ccc-ccccccHHHhcchhhh
Confidence 6677777666554 89999999875 89999999999998755554333 33444332 222 2345799999999999
Q ss_pred CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec-----------C
Q 037587 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN-----------N 289 (464)
Q Consensus 221 ~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~-----------~ 289 (464)
+|+|+.+|.+|++..|.-+ ++..+..-++. ..-+-...||++ +.-.-+.-+... +
T Consensus 264 ~glWLHVDAAYAGsa~iCp--E~r~l~rGie~-----------aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vd 329 (511)
T KOG0628|consen 264 EGLWLHVDAAYAGSAFICP--EFRYLMRGIEY-----------ADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVD 329 (511)
T ss_pred cCEEEEeehhhccccccCH--HHHHHhhcchh-----------hccccCChhhee-EEeeeeecceeecCceeeeeeecC
Confidence 9999999999997765544 33332221110 011122345543 222222222221 1
Q ss_pred H-HHHHHHH-Hhccc--CCCC------hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CCc
Q 037587 290 E-RVVSAAT-KMSSF--GLVS------SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-SNA 357 (464)
Q Consensus 290 ~-~~~~~~~-~~~~~--~~~s------~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~ 357 (464)
+ .+..... ....+ |.++ ++-.......+.-..+ ++++++. .+..+.+.+.+.+- .+++.. ..-
T Consensus 330 p~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~l-q~~iR~h----~~La~~fe~lv~~d~~FE~~~~~~l 404 (511)
T KOG0628|consen 330 PLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENL-QNYIREH----VRLAKEFETLVRADPRFEIVNKRIL 404 (511)
T ss_pred hHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhHHHH-HHHHHHH----HHHHHHHHHHhhcCCcceeeccccc
Confidence 1 1111111 11111 1111 1222223333222221 2222221 22222233322221 344432 333
Q ss_pred cEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 358 GLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 358 g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
| .+.+++... . ....+++.++-....|.+.|.+.- +.-.+|++++. .++++++++.+.|.+...+..
T Consensus 405 g-LvcFRlk~~---N--~~ne~Ll~~in~~g~i~l~~~~l~---gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 405 G-LVCFRLKGD---N--EINEALLNRLNSSGRIHLVPASLH---GKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred c-eeEEeecCC---c--HHHHHHHHHHHhcCcEEEEEeeec---ceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5 445566532 1 223468888877778999887642 24469999977 578999999988888776643
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.34 E-value=0.00013 Score=70.30 Aligned_cols=293 Identities=15% Similarity=0.208 Sum_probs=162.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CC-----C-----CeEE-EcCCCCCChhhhcccCCC---cEEEEEecCCCCCcccC
Q 037587 109 PNKLVLTAGSTAANETLMFCLA--DP-----G-----DAFL-LPTPYYPGFDRDLKWRPG---VEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~--~~-----g-----d~Vl-v~~p~y~~~~~~~~~~~g---~~~~~v~~~~~~~~~~d 172 (464)
.|.|+--.|+...++.+..+=. -| | +-|+ +.+-+|.++..+++.+ | -.++.|++++. ..++
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~l-g~gtd~c~~v~t~e~--Gkm~ 236 (510)
T KOG0629|consen 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFL-GLGTDHCIKVKTDER--GKMI 236 (510)
T ss_pred CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHh-ccCCceeEEeccccc--Cccc
Confidence 4666655556655555543311 01 1 3343 4455566677776665 6 46888888754 4689
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhc
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~ 252 (464)
+++||+.|......|..|-.|-.+.-..-.|.. +++..|+++|++|++|+.+|.+|.+...-+. .......-+.
T Consensus 237 ~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWmHvDAAwGGglLmS~--k~R~kl~Gie- 310 (510)
T KOG0629|consen 237 PDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWMHVDAAWGGGLLMSR--KHRHKLTGIE- 310 (510)
T ss_pred hHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEEEeecccccccccCh--hhHhhccCcc-
Confidence 999999998875555444332222224566666 6799999999999999999999987433332 1112111111
Q ss_pred cCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--------cC---------------CCChHH
Q 037587 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--------FG---------------LVSSQT 309 (464)
Q Consensus 253 ~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--------~~---------------~~s~~~ 309 (464)
..--+.++.+|.+| +.+.++.++.+.+-+.+.-+.+.- ++ .+..+-
T Consensus 311 ----------ra~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FK 379 (510)
T KOG0629|consen 311 ----------RANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFK 379 (510)
T ss_pred ----------ccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHH
Confidence 11234679999999 888888887755444333222110 00 112222
Q ss_pred HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC--eeec--CC-ccEEEEEecCcccccCC--hhHH-----
Q 037587 310 QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI--RCLK--SN-AGLFCWVDMRHLLVSNT--FEAE----- 377 (464)
Q Consensus 310 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~--~~~~--~~-~g~f~~~~l~~~~~~~~--~~~~----- 377 (464)
+..+-.+-....+ ++..+.+-+..+++.+.+++.+. .++. |+ .+.-.|. +|+.+.... .+..
T Consensus 380 lWlmwkaKG~~Gf-----e~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~-vp~~lR~~~~~~e~~~rL~k 453 (510)
T KOG0629|consen 380 LWLMWKAKGTQGF-----EAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY-VPPSLRGWQENPERDSRLVK 453 (510)
T ss_pred HHHHHHhcccccH-----HHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc-CchHhccCcccchhhhHHHh
Confidence 3333333333333 44455556677889999988742 2332 44 3322333 333222111 0000
Q ss_pred --HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHH
Q 037587 378 --KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFA 429 (464)
Q Consensus 378 --~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l 429 (464)
-.+-..+++ .|-... |...-...+++||+.++. ++..+++-+++.|..+=
T Consensus 454 VaPkIK~~Mm~-~Gt~Mi-~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 454 VAPKIKERMMK-KGTTMI-GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred hCcHHHHHHHh-ccceee-EecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 023344543 354433 111111236799999977 47889999988887653
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.28 E-value=0.00089 Score=65.03 Aligned_cols=270 Identities=20% Similarity=0.251 Sum_probs=151.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChhhhcccC---CCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDRDLKWR---PGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
++-.|--+-.++|.+=..++.+.. .+..+++|+.-+|+.+...++.+ .|.+++.++.+ |++.+++.
T Consensus 135 m~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~- 206 (450)
T COG0403 135 LDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA- 206 (450)
T ss_pred CCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-
Confidence 455566666777766666655542 23589999999999888776542 15677766643 56777766
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEe-ccccccccCCCCCCccchhhhhhccCcCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD-EIYSGTVFDSPSSSFISIMEAVMDRNIDESD 259 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~D-eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 259 (464)
.. ..+.++++.+| |-.|... ++++++++.+++++.++++= |.-+ +. ++. ++
T Consensus 207 ~~-----~~~~gv~vQyP-~~~G~~~--~d~~~l~~~~h~~~al~~v~aDpla---L~-----------LL~------pP 258 (450)
T COG0403 207 DD-----GDVFGVLVQYP-NTFGIVE--EDLRALIEAAHSAGALVIVAADPLA---LG-----------LLK------PP 258 (450)
T ss_pred cc-----cCeEEEEEecC-CCCCccc--hhHHHHHHHHhhcCCEEEEEechhH---hh-----------ccC------Cc
Confidence 32 36788999999 4677332 67999999999998776632 1111 10 111 11
Q ss_pred CCCCcEEEEcCCCc---CCCCCccEEEEEEecCHHHHHH---------------------------HHHhcccCC-CChH
Q 037587 260 DLWSRIHIVYSLSK---DFSMPGFRVGMIYSNNERVVSA---------------------------ATKMSSFGL-VSSQ 308 (464)
Q Consensus 260 ~~~~~vi~l~S~SK---~~g~~GlRiG~l~~~~~~~~~~---------------------------~~~~~~~~~-~s~~ 308 (464)
+..+-.|++++..- -+|..|-.+||..+..+...+. +++-.-..+ ++..
T Consensus 259 Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQ 338 (450)
T COG0403 259 GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQ 338 (450)
T ss_pred cccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHH
Confidence 23356677776543 3455577788877744322111 111110111 1112
Q ss_pred HHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC--CCeeecCCccEEE--EEecCcccccCChhHHHHHHHHH
Q 037587 309 TQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA--GIRCLKSNAGLFC--WVDMRHLLVSNTFEAEKELWKKI 384 (464)
Q Consensus 309 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~~~~~g~f~--~~~l~~~~~~~~~~~~~~l~~~l 384 (464)
...+.++.+-..-+-.+-+++.-.+..+...++.+.|++. |+++... .+|- .++++. ....+++.+.
T Consensus 339 aLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~-------~~~~~l~~~~ 409 (450)
T COG0403 339 ALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPE-------EVAEALLAAA 409 (450)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecch-------hHHHHHHHHH
Confidence 1111111111000113446666677777888899999965 5766543 4553 344442 1111233333
Q ss_pred HHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 385 IFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 385 l~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
. ..|+-++.- .++.+-+++.- .++++++.+++.+...
T Consensus 410 ~-~~G~~L~~~------~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 410 I-AGGINLRRV------DADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred H-hcCCceeee------cCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 2 457776632 23356677755 4688888888877654
No 386
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.25 E-value=0.00014 Score=70.93 Aligned_cols=304 Identities=13% Similarity=0.144 Sum_probs=175.4
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----C-CC---CeEEEcCCCCCChhhhcccCCCc
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----D-PG---DAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~-~g---d~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
+...+..+..+.+...++.+ +...=..|.|+++++...-.... . .| ..++++...+..+...++.. ++
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~---~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf-~v 192 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAP---SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYF-EV 192 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCC---ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhE-EE
Confidence 34556666666666555421 11233468899999555544421 1 22 34666666676666666655 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh-CCeEEEEeccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS-KRIHIVSDEIYSGTV 235 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~-~~~~lI~Deay~~~~ 235 (464)
++..+|+++ ++|.+|+..+...+++ ++.+++..-|+.|+|.. +++++|.++..+ +++.+-+|.+-++|.
T Consensus 193 ~l~~V~~~~-~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi 262 (491)
T KOG1383|consen 193 ELREVPLDE-GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFI 262 (491)
T ss_pred EEEeeeccc-cceEecHHHHHHHhcc------ceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCcccc
Confidence 999999986 7899999999999876 89999999999999998 889999999888 999999999888754
Q ss_pred cC-CCCCCccchhhhhhccCcCCCCCCCCcEEEE-cCCCcCCCCCccEEEEEEecCHHHHH-HHHH--------hcccC-
Q 037587 236 FD-SPSSSFISIMEAVMDRNIDESDDLWSRIHIV-YSLSKDFSMPGFRVGMIYSNNERVVS-AATK--------MSSFG- 303 (464)
Q Consensus 236 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l-~S~SK~~g~~GlRiG~l~~~~~~~~~-~~~~--------~~~~~- 303 (464)
.. ... .+ ....+ ..+.|-.+ .+-+| ||+.--..||++-+++.+.. .+.- ..++.
T Consensus 263 ~p~~~~-~~-~~fdF-----------r~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~Tl 328 (491)
T KOG1383|consen 263 NPAGYL-NE-EEFDF-----------RVPGVTSISADGHK-YGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTL 328 (491)
T ss_pred cccccc-Cc-ccccc-----------CCCCceeEeeccce-eeeeecCcEEEEEcccccccceEEEeccccCccccCccc
Confidence 31 110 00 00001 11222222 34455 45443347888765544322 1100 01110
Q ss_pred C---CCh--HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHH
Q 037587 304 L---VSS--QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 304 ~---~s~--~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~ 377 (464)
. .++ ..|.+..--+.... ..++.+.+.+....+.+.+++. ++.++....--|+...-.. .+.
T Consensus 329 ngSR~g~~va~~wa~~~~lG~eG-----Y~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-------~~i 396 (491)
T KOG1383|consen 329 NGSRPGSQVAAQWAALMSLGEEG-----YRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND-------VNI 396 (491)
T ss_pred ccCCcccHHHHHHHHHHHhhHHH-----HHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc-------cch
Confidence 0 112 23333333333333 3444555667778889999886 5665543221122221111 111
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
-+ ...++++.|-.+. +-.|. ..+-|++.. ..++-.++++.-|++++++...
T Consensus 397 ~e-lsd~l~~~GW~ln-alq~P----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 397 FE-LSDLLRKKGWILN-ALQFP----AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred hh-hhHHHHhcCcCcc-ccCCC----CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 12 3455677787764 43333 234445443 2455567788888888877663
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.12 E-value=0.0007 Score=64.59 Aligned_cols=332 Identities=14% Similarity=0.115 Sum_probs=169.9
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
.+.+||.+...+|++.+.++-+...+- -..|..-.+.-++- +-...+.+...+.+.+.++ +|-+.+=+++-.
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~---~g~g~svme~SHRs---k~~~~v~~~a~~~lreLl~--iPd~Y~VlflqG 76 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDW---NGLGMSVMEISHRS---KEFKNVLEEAEKDLRELLN--IPDDYKVLFLQG 76 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhh---ccCCcceeeecccc---HHHHHHHHHHHHHHHHHhC--CCCCceEEEEcC
Confidence 346788877667776665554432111 00011111111111 1123444444444444444 333333445567
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-cccCCCcEEEE-EecCCCCCc--ccCHHHHHHHHHHHhhcCCceEE
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-LKWRPGVEIVP-IHCSSSNGF--RITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~~g~~~~~-v~~~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
|++....++...|+.+...-.+..-.|..+... ++.. +..+.. .+...+.+| -++++... +. .+...
T Consensus 77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~-~~~~~~~~~~~~~~~~~~iP~~~~~~--~~------~~~ay 147 (365)
T COG1932 77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKV-GKQPKLIDARIEEAGYGSIPDLSKWD--FS------DNDAY 147 (365)
T ss_pred ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHh-cccccccccceeccCccCCCChhhcc--cC------CCccE
Confidence 789999999999887654312333344433211 2222 321111 111111222 23333322 11 12333
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|.+|.-+.-+|+-++. ...+. .+.++|.|-.-.- +..+ .++. .-.++..|.-
T Consensus 148 v~~~~NeTi~Gv~v~~--~p~~~-----~~~~~v~D~SS~i--lsr~----iDvs---------------k~dviyagaQ 199 (365)
T COG1932 148 VHFCWNETISGVEVPE--LPDIG-----SDGLLVADASSAI--LSRP----IDVS---------------KYDVIYAGAQ 199 (365)
T ss_pred EEEecCCcccceEccC--CCCCC-----CCceEEEecccHH--hcCC----CChh---------------HcceEEEehh
Confidence 6666445677877651 11111 1267888865542 3222 2322 2235568999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHh---------------cccCCCChHHHHHHH----HHcCCchhhHHHHHHHHHH
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKM---------------SSFGLVSSQTQYLLS----RMLSDKKFTCNYMKENRKR 333 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~---------------~~~~~~s~~~q~~~~----~~l~~~~~~~~~~~~~~~~ 333 (464)
|.+|..| ++.++.++..+.+ .... ..+++++.++-+.+. .+...+. ++...++
T Consensus 200 KnlGpaG--ltvvIvr~~~l~r-~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG-----l~~~~~r 271 (365)
T COG1932 200 KNLGPAG--LTVVIVRPDLLER-AESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG-----LEALEAR 271 (365)
T ss_pred hccCccc--eEEEEEcHHHHhc-ccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC-----HHHHHHH
Confidence 9999888 7888885554433 2221 223334444333322 2333343 3444555
Q ss_pred HHHHHHHHHHHHHhCCCe---ee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 334 LRKRKEMLVSGLKVAGIR---CL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 334 ~~~~~~~l~~~l~~~g~~---~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
-+++.+.|.+.+.+.++- +. ...+.+-+.+++.+. +-+..+...+ +++|+...-|.. ..+.+|++
T Consensus 272 n~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~------~ld~~fv~ea-e~~gl~~lkGhr----~vgGmRas 340 (365)
T COG1932 272 NQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDA------ELDKGFVAEA-EAAGLIYLKGHR----SVGGLRAS 340 (365)
T ss_pred HHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcH------HHHHHHHHHH-HHcCCceecccc----CCCceeee
Confidence 566778888888876542 11 234456667776631 2223455555 456777766632 34459999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHhh
Q 037587 410 FAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 410 ~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+.. ++.|+++.++.-|+.+.+++
T Consensus 341 iynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 341 IYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred eecCCCHHHHHHHHHHHHHHHHhh
Confidence 987 88999999999999887765
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.09 E-value=4.8e-06 Score=79.89 Aligned_cols=212 Identities=20% Similarity=0.221 Sum_probs=45.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC---CCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY---YPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~---y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
.+..+++|+...++.+++.+++ +|..|++..-. +++ +...++.. |++++.+-... .-.+++++++|.+
T Consensus 62 AeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~s-Ga~lvEVGttN----~t~~~Dye~AI~e 135 (367)
T PF03841_consen 62 AEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQS-GARLVEVGTTN----RTHLSDYEKAITE 135 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc-cccccccccccccccccccccccccccc-ccccccccccc----ccccccccccccc
Confidence 4567788888889999988886 45566655322 121 33455555 99998887642 2357888888876
Q ss_pred HhhcCCceEEEEEeCCCCCC--CCCCCHHHHHHHHHHHhhCCeEEEEeccccccc----cCCCCCCccchhhhhhccCcC
Q 037587 183 AQTLNLKVKGVLITNPSNPL--GTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV----FDSPSSSFISIMEAVMDRNID 256 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPt--G~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~----~~~~~~~~~~~~~l~~~~~~~ 256 (464)
++.+++..+++|.. |.. ..-.++++++++++|++++|+|-.-+.+. |+-+ .-+++...+.
T Consensus 136 ------~Ta~ll~Vh~Sn~~i~GFt-~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~--~Ep~v~~~~~----- 201 (367)
T PF03841_consen 136 ------NTAALLKVHTSNFRIQGFT-GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLP--DEPTVQEYLA----- 201 (367)
T ss_dssp --------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT------------CCC-----
T ss_pred ------ccccccccccccccccccc-ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCc--cccHHHHHhh-----
Confidence 88888889988863 222 11258888999999999999997663221 1111 1123333322
Q ss_pred CCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcC---Cchh------hHH
Q 037587 257 ESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLS---DKKF------TCN 325 (464)
Q Consensus 257 ~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~---~~~~------~~~ 325 (464)
.+..+++.|-.|.+| |-..|.|++. +.+++.+++..-. .-+.-...+++.+.|+ +++. ..+
T Consensus 202 -----~GaDlV~fSGdKlLG--GPQaGiI~Gk-k~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ 273 (367)
T PF03841_consen 202 -----AGADLVTFSGDKLLG--GPQAGIIVGK-KELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLR 273 (367)
T ss_dssp -----CT-SEEEEETTSSSS--S-S-EEEEEE-HHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---------------
T ss_pred -----cCCCEEEEECCCcCC--CCCeEEEEeC-HHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 256678889999985 5568999994 5555555543221 2244455544444333 1110 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.+....+.++++.+.+...|...
T Consensus 274 ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 274 MLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp -----------------------
T ss_pred ccccccccccccccccccccccc
Confidence 23344455666666666666543
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00059 Score=64.39 Aligned_cols=216 Identities=16% Similarity=0.179 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhh
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNP-SNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAV 250 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~ 250 (464)
++++++.|.+..+....+.++ |.-| ....| ...|++..+.+.+++.+|++.+|+||+.-+..-.+ .++..-.+
T Consensus 255 l~~Ve~li~~~~~k~~pVaai-IvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTG---k~WaHehw- 329 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAI-IVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATG---KFWAHEHW- 329 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEE-EeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccC---ceeeehhc-
Confidence 567777777665444455554 4456 55555 45689999999999999999999999997532222 12221111
Q ss_pred hccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHH-HHHHhcccCCCChH---HHHHHHHHcCCchhhHHH
Q 037587 251 MDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-AATKMSSFGLVSSQ---TQYLLSRMLSDKKFTCNY 326 (464)
Q Consensus 251 ~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~~~~~~~~~~~s~~---~q~~~~~~l~~~~~~~~~ 326 (464)
++ +.+.. +-||||-|- .| ||... .+..-. ..+.+..+. ..+. ....+...+.+.++ .+.
T Consensus 330 -~l------~~PpD---~vTFSKK~q-~g---Gffh~-~~frpn~pYrifNTWm-GdP~k~lll~~vv~~I~~~~L-l~n 392 (484)
T KOG1405|consen 330 -NL------DSPPD---VVTFSKKFQ-TG---GFFHD-EEFRPNEPYRIFNTWM-GDPSKNLLLEEVVQEIKREDL-LNN 392 (484)
T ss_pred -CC------CCCcc---ceehhhhhh-cC---ccccC-cccCCCchHHHhhhhc-CChHHHHHHHHHHHHHhHHHH-HHH
Confidence 00 01122 349999994 55 67654 222211 222223322 2222 22223333443333 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-----C-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 327 MKENRKRLRKRKEMLVSGLKVA-----G-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~~-----g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
..+ .-+.|...|.++ | +.-.... |-|+-+++|..... ..++. .++-+||.+--|
T Consensus 393 ~~~-------vG~~l~~gL~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~~R------dk~i~-~~~~nGv~~GGC----- 452 (484)
T KOG1405|consen 393 VAH-------VGKALLKGLLELQAKYPGKINNLRGR-GTFIAWDCPSGSIR------DKLIL-IARLNGVNLGGC----- 452 (484)
T ss_pred HHH-------HHHHHHHHHHHHHHhCchhhhccccc-ceEEEEeCCChHHH------HHHHH-HHHHcCceeccc-----
Confidence 222 223333333332 1 2222334 45888898864211 12443 345678876422
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 401 NEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 401 ~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+...+|+..+. ..+...+.+++++.+.+..
T Consensus 453 -g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 453 -GDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -ccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 23446665554 3778888899999888753
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.69 E-value=0.0061 Score=66.20 Aligned_cols=260 Identities=16% Similarity=0.166 Sum_probs=139.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHh--c-CCCCeEEEcCCCCCChhhhcccC---CCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCL--A-DPGDAFLLPTPYYPGFDRDLKWR---PGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l--~-~~gd~Vlv~~p~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
++-.|--+-.|++.+=..++.+. . .+..+|+|+.-.++.+...++.+ .|++++. +++++.+
T Consensus 139 m~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~ 205 (954)
T PRK12566 139 LDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLA 205 (954)
T ss_pred chhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcC
Confidence 44444444456555444333232 1 22468999999998877665432 2556553 2222222
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
. .++.+|++.+| |-.|.+ +++++|+++++++|.++| +.+.- +...-- .+ ++
T Consensus 206 ~------~~~~~v~vq~P-~~~G~i---~d~~~i~~~~h~~gal~~-~~~d~-laL~ll----~~-------------Pg 256 (954)
T PRK12566 206 A------HAVFGALLQYP-DTHGEI---RDLRPLIDQLHGQQALAC-VAADL-LSLLVL----TP-------------PG 256 (954)
T ss_pred C------CCEEEEEEECC-CCceEE---ccHHHHHHHHHHcCCEEE-EEeCH-HHHhCC----CC-------------hh
Confidence 2 26788899999 678888 678899999999887755 22211 111111 01 12
Q ss_pred CCCcEEEEc---CCCcCCCCCccEEEEEEecCHHHHHHHH----------------------------H--hcccCCCCh
Q 037587 261 LWSRIHIVY---SLSKDFSMPGFRVGMIYSNNERVVSAAT----------------------------K--MSSFGLVSS 307 (464)
Q Consensus 261 ~~~~vi~l~---S~SK~~g~~GlRiG~l~~~~~~~~~~~~----------------------------~--~~~~~~~s~ 307 (464)
..+-.|+++ +|+=-+|..|--.||+.+.++ +.+.+. + ..+.. ++.
T Consensus 257 e~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~-~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNI-CT~ 334 (954)
T PRK12566 257 ELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD-YKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNI-CTA 334 (954)
T ss_pred hcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH-HHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchh-hHH
Confidence 335556554 334444445666788877433 222210 0 01111 111
Q ss_pred HHHHH-HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHH
Q 037587 308 QTQYL-LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIF 386 (464)
Q Consensus 308 ~~q~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~ 386 (464)
....+ ++.+... -+-.+-+++.-++...+..++.+.|.+.|+++... .||=-+.+.-. . ...++....+
T Consensus 335 qaL~A~~a~~Y~~-~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~--~fF~~~~v~~~--~----~~~~~~~~a~- 404 (954)
T PRK12566 335 QVLLANIAGFYAV-YHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR--HFFDTLTLEVG--G----AQAAIIESAE- 404 (954)
T ss_pred HHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CccceEEEEcc--C----CHHHHHHHHH-
Confidence 21111 2221110 01133456666666777788999999988876432 45533333211 0 1223555554
Q ss_pred hcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHH
Q 037587 387 EVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 387 ~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
+.||-++-- +++.+.||+.- .+.+++..++..+.
T Consensus 405 ~~~~n~r~~------~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 405 AARINLRIL------GRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HCCCeeEEe------CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 568888732 24568888866 67888998888874
No 391
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.48 E-value=0.0043 Score=56.34 Aligned_cols=256 Identities=16% Similarity=0.220 Sum_probs=127.7
Q ss_pred CcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 155 GVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 155 g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|.+++.+..- +.+...-|+++++..+++. |+.. |+..+.....=..-+++.+++|..+|..|++.-|+..+|+
T Consensus 124 gfepiiie~i~d~d~l~tdleav~~~iee~---g~dc--ilci~sttscfapr~pd~leaiaaica~~diphivnnayg- 197 (432)
T KOG3843|consen 124 GFEPIIIENILDGDELITDLEAVEAIIEEL---GEDC--ILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG- 197 (432)
T ss_pred CCCceeeeccccchHHHHhHHHHHHHHHHh---CCce--EEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccc-
Confidence 8877666532 2234455788888888764 3333 2222221111122356889999999999999999999997
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe-cCHHHHHHHHHhcccCCCChHHHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS-NNERVVSAATKMSSFGLVSSQTQYL 312 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~-~~~~~~~~~~~~~~~~~~s~~~q~~ 312 (464)
.... +.........+. ....-++.|+-|.|-+|= -|.+++ -++..++.+.++.+-...++++...
T Consensus 198 --lqse--e~i~~iaa~~~~--------grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~ypgrasa~ps~dl 263 (432)
T KOG3843|consen 198 --LQSE--ECIHKIAAAAEC--------GRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYPGRASASPSLDL 263 (432)
T ss_pred --cchH--HHHHHHHHHhhh--------ccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCCCccccCccHHH
Confidence 3222 111111111111 122345789999996541 134443 2333444444444333334455555
Q ss_pred HHHHcC--CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcC
Q 037587 313 LSRMLS--DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 313 ~~~~l~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~g 389 (464)
+..+|. ...| .+.+.++.+.+.+.+..+...-+..|-.++. |+.....-+.+......+ +....++-.+|-..|
T Consensus 264 litll~~gqn~f-~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k--~kavt~~gsilfak~ 340 (432)
T KOG3843|consen 264 LITLLSLGQNAF-KELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAK--DKAVTLFGSILFAKG 340 (432)
T ss_pred HHHHHHhchhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHH--hhHHHHHHHHHHhcc
Confidence 555444 3444 4555555665555556665555555433332 222212222222111111 111123333333445
Q ss_pred eE---EeCCCCCCCCCC----------------CeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 390 LN---ISPGSSCHCNEP----------------GWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 390 I~---v~pg~~f~~~~~----------------~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|. |.|.+.....-. +|+-+..+. ++..++++++.+|...+.+.+
T Consensus 341 isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ 404 (432)
T KOG3843|consen 341 ISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFR 404 (432)
T ss_pred ccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHH
Confidence 53 555433221111 234333322 567889999999988776554
No 392
>PLN02672 methionine S-methyltransferase
Probab=97.13 E-value=0.021 Score=63.38 Aligned_cols=193 Identities=16% Similarity=0.138 Sum_probs=124.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh------cCCCCeEEEcCCCCCChhhhc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL------ADPGDAFLLPTPYYPGFDRDL 150 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l------~~~gd~Vlv~~p~y~~~~~~~ 150 (464)
..-|.++.|...+|..||.|++.+++ +++++++|++.+.-..++..+++.+ ++.+.+-.++. .| ...+
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~ 492 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHH--IPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK-KW---LTSL 492 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcC--CcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH-HH---HhHh
Confidence 34577888999999999999999988 7889999999999999998877764 33332222221 11 1111
Q ss_pred ccC-------CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 151 KWR-------PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 151 ~~~-------~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
... .+..+..+.-.. ..+.+.+.++.. ++++|+..-.. +-..+....+.|++.+++.|.
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 558 (1082)
T PLN02672 493 AIENATSDSKSDDVITVIEAPR------QSDLVIELIKKL-----KPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGA 558 (1082)
T ss_pred hhhcccccCccCCeEEEEeCCC------cchHHHHHHHhC-----CCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCc
Confidence 111 012222222111 124566666654 77766655332 334455678999999999999
Q ss_pred EEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH
Q 037587 224 HIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT 297 (464)
Q Consensus 224 ~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~ 297 (464)
.++.|+.-.- ...+.+ ....+.+++..- ..+.+..++.++-|.-=.+.+-+.+++.-++.+...+.
T Consensus 559 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (1082)
T PLN02672 559 RLFLDISDHL-ELSSLP-GSNGVLKYLAGH------PLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALS 624 (1082)
T ss_pred EEEEehhhhe-eeccCC-CcccHHHHhcCC------CCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHH
Confidence 9999986531 122221 234555555432 14567777889988755589999999987776666554
No 393
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.89 E-value=0.26 Score=50.67 Aligned_cols=311 Identities=14% Similarity=0.193 Sum_probs=167.3
Q ss_pred cccccCCCC---CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE--eCCh---HHHHHHHHHHhcCCC----CeEEEcCCC
Q 037587 75 RELALFQDY---HGFPDAKKELVKLMARIRGNKVKFDPNKLVL--TAGS---TAANETLMFCLADPG----DAFLLPTPY 142 (464)
Q Consensus 75 ~~~~~Y~~~---~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i--t~G~---~~al~~~~~~l~~~g----d~Vlv~~p~ 142 (464)
.+++-|.|. +|+.++-+.+.+.+-+..| .|++.+ .+|+ ..++..+-..+-..| ...|+|.-.
T Consensus 566 anIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG------~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSA 639 (1001)
T KOG2040|consen 566 ANIHPFAPVEQAQGYQQLFTELEKDLCEITG------FDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSA 639 (1001)
T ss_pred ccCCCCCchHHHhhHHHHHHHHHHHhheeec------ccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecc
Confidence 445555543 5788888888888765433 344444 3333 334444332333444 346677666
Q ss_pred CCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 143 YPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 143 y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
++.-...+.. +|.+++++.++..+ .+|..+|.+..++. ..+..++.++.|+. -|.. .+.+++++++..+||
T Consensus 640 HGTNPASA~M-agmkvvpV~~~~~G--~id~~dLk~kaekh---~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehG 710 (1001)
T KOG2040|consen 640 HGTNPASAAM-AGMKVVPVGCDANG--NIDMVDLKAKAEKH---KDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHG 710 (1001)
T ss_pred cCCChhhHHh-cCCEEEEeeccCCC--CccHHHHHHHHHHh---hhhhheeEEecccc-cccc--cccHHHHHHHHHhcC
Confidence 7654444554 49999999988544 58999998877653 23677788888843 3443 357899999999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC----ccEEEEEEecCHHHHHHHHH
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP----GFRVGMIYSNNERVVSAATK 298 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~----GlRiG~l~~~~~~~~~~~~~ 298 (464)
.-+..|.+-..-..+-. .+.. + +..+.=--++|+|..| |-.+|=|.. ++.+...+..
T Consensus 711 GQVYlDGANMNAqVGlc--~pGd---~-------------GaDV~HLNLHKTFcIPHGGGGPg~gPIgV-K~HLapfLP~ 771 (1001)
T KOG2040|consen 711 GQVYLDGANMNAQVGLC--RPGD---I-------------GADVCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPS 771 (1001)
T ss_pred CEEEecCCCccceeccc--CCcc---c-------------cccceeecccceeeecCCCCCCCCCccch-hhhccccCCC
Confidence 99999987754322111 0001 1 1222223567777433 223343332 2222222111
Q ss_pred h-------------------cccCCCCh-HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCcc
Q 037587 299 M-------------------SSFGLVSS-QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAG 358 (464)
Q Consensus 299 ~-------------------~~~~~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g 358 (464)
. .+|++... +.-++-..++....+ . .....+. -+..++.+.|+.+--.++...-|
T Consensus 772 HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL-~--~as~~Ai--LNaNYMakRLe~hYkil~~~~~~ 846 (1001)
T KOG2040|consen 772 HPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGL-K--DASKIAI--LNANYMAKRLESHYKILFRGENG 846 (1001)
T ss_pred CCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhccccc-c--hhhHHHh--hhhHHHHHHHhhccceeEecCCc
Confidence 0 11111111 233455555555443 1 1111222 24467888888763223332222
Q ss_pred E---EEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 359 L---FCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 359 ~---f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
. =+.+++........ .+..+++++|. ++|..-. .-.|. -.+.+-|-... .+.+|+++++++|-.+-
T Consensus 847 ~vaHEFIlD~r~fK~~ag-ieavDvAKRL~-DYgFHaP-TmswP--V~gtLMIEPTESE~k~ElDRfcdAliSIr 916 (1001)
T KOG2040|consen 847 LVAHEFILDLRPFKKTAG-IEAVDVAKRLM-DYGFHAP-TMSWP--VAGTLMIEPTESEDKAELDRFCDALISIR 916 (1001)
T ss_pred ceeeeeeeechhhccccC-CcHHHHHHHHH-hccCCCC-ccccc--cCCceEeccCccccHHHHHHHHHHHHHHH
Confidence 1 12356654433232 23346778875 7888763 33332 35666665543 46788999888876543
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.35 E-value=0.28 Score=45.48 Aligned_cols=335 Identities=16% Similarity=0.133 Sum_probs=170.6
Q ss_pred CCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 35 PSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
+..+|+|+.+.-.+|.+.+.++-+...+ +..-|+.-.+-.++ +.....+...--..+.+..+ +|-.-+-+++
T Consensus 5 ~~~vvnFaaGPAklp~~VL~e~qkdl~n---~~g~GisV~EmSHR---sk~f~kii~~tes~lreLln--iPdn~~vlf~ 76 (370)
T KOG2790|consen 5 PERVVNFAAGPAKLPESVLLEAQKDLLN---FNGSGISVMEMSHR---SKDFAKIINDTESLLRELLN--IPDNYKVLFL 76 (370)
T ss_pred ccceeecCCCcccCCHHHHHHHHHHhhc---cCCCcceEEEeccc---chhHHHHHHHHHHHHHHHHc--CCCceeEEEE
Confidence 5678999988777777766665444321 11112111111111 11123333333333433333 3322334566
Q ss_pred eCChHHHHHHHHHHhc--CCC---CeEEEcCCCCCChhhhcccCCCcE-EEEEecCCCC-CcccCHHHHHHHHHHHhhcC
Q 037587 115 TAGSTAANETLMFCLA--DPG---DAFLLPTPYYPGFDRDLKWRPGVE-IVPIHCSSSN-GFRITISALENAYQQAQTLN 187 (464)
Q Consensus 115 t~G~~~al~~~~~~l~--~~g---d~Vlv~~p~y~~~~~~~~~~~g~~-~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~ 187 (464)
-.|++.-...+...|+ +.| |-|+.-.++-..+.++-+ . |.. .+..+..+.. +--+|.+.++. +
T Consensus 77 QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk-~-~~~~~V~~~~k~y~ygkvPd~~~w~~--------~ 146 (370)
T KOG2790|consen 77 QGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKK-Y-GTPNIVIPKLKSYTYGKVPDPSTWEL--------N 146 (370)
T ss_pred eCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHh-h-CCceEEeccccccccCcCCChhhccc--------C
Confidence 7788888777777775 344 556665554444444333 3 433 3333322111 01134444432 2
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++.+.|++|.-..--|.-++.-. .-.-++.++|.|-.-- |-.. + .++ ...-++
T Consensus 147 ~da~yvyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSn---flSr--p-vDv---------------sk~gvi 199 (370)
T KOG2790|consen 147 PDASYVYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSN---FLSR--P-VDV---------------SKFGVI 199 (370)
T ss_pred CCccEEEEecCceeeceecCCCC------CCCCCCceEEEecccc---hhcC--C-ccc---------------hhcceE
Confidence 35566777754444455443211 1124577888886543 3333 1 221 133456
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHH-------------hcccCCCChHH----HHHHHHHcCCchhhHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATK-------------MSSFGLVSSQT----QYLLSRMLSDKKFTCNYMKEN 330 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-------------~~~~~~~s~~~----q~~~~~~l~~~~~~~~~~~~~ 330 (464)
+.+.-|.+|++|+-+ ++.+++.+...... ...+++++.+. -.....+++.+. +..+
T Consensus 200 ~aGAQKN~G~aG~Tv--vivr~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GG-----l~a~ 272 (370)
T KOG2790|consen 200 FAGAQKNVGPAGVTV--VIVRKDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGG-----LAAM 272 (370)
T ss_pred EeccccccCccccEE--EEEehhhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhccc-----HHHH
Confidence 789999999999533 34434333222110 11123333222 233445555555 3444
Q ss_pred HHHHHHHHHHHHHHHHhC-CCeeecC----CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 037587 331 RKRLRKRKEMLVSGLKVA-GIRCLKS----NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGW 405 (464)
Q Consensus 331 ~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 405 (464)
.+.-.+..+.+.+.+.+. |+-..+- .+-|-+.+++.+ ..-+.+|....++++-|.+ -|.. .-|.
T Consensus 273 e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~------d~Le~eFLkeA~~~~mv~L-KGhR----SVGG 341 (370)
T KOG2790|consen 273 EKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEK------DELEAEFLKEAAKEHMVQL-KGHR----SVGG 341 (370)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecc------hHHHHHHHHHHHHhhhhcc-cccc----cccc
Confidence 455566778889998876 5432221 122333344431 1334467777765543433 3332 3466
Q ss_pred EEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 406 FRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 406 ~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+|-|+-. ++-++.+.++.-++++.+.+
T Consensus 342 iRASlYNAisv~~~q~L~~~m~~F~k~h 369 (370)
T KOG2790|consen 342 IRASLYNAISVEEVQKLAAFMKEFQKKH 369 (370)
T ss_pred chhhhhccccHHHHHHHHHHHHHHHHhc
Confidence 9999976 78999999999999988765
No 395
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.20 E-value=1.1 Score=42.07 Aligned_cols=154 Identities=11% Similarity=0.108 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCC---CeEEEcCCCCCCh----hhhcccCCCcEE-
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPG---DAFLLPTPYYPGF----DRDLKWRPGVEI- 158 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~g---d~Vlv~~p~y~~~----~~~~~~~~g~~~- 158 (464)
......++...+ ...++|.+.|.-+..+..++.++.+|- -+||.+.-.|+.- ...++.. |..+
T Consensus 114 e~il~l~~~iVG--------A~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lh-G~~~e 184 (465)
T KOG3846|consen 114 EPILPLLAPIVG--------AQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLH-GISPE 184 (465)
T ss_pred hhhhhhhhhhcc--------CCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhc-CCChH
Confidence 444445555543 677889999999999999999998875 3688888777653 2334433 5532
Q ss_pred ---EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 159 ---VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 159 ---~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
+.+... ++.-.+..+++.+.|+. ++..+.+|+++-.+-.||+.++ +.+|...-+..|+++=.|-+++
T Consensus 185 ~sm~~iePR-EGEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA--- 254 (465)
T KOG3846|consen 185 NSMIQIEPR-EGEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA--- 254 (465)
T ss_pred HheEEeccc-ccccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh---
Confidence 222222 34445667777777654 4556777777778999999986 5555544445688887888876
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF 275 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~ 275 (464)
++.- +. .+. .|+..+.++.--|-+
T Consensus 255 vgNV--pL-----~LH---------dWgVDFACWCSYKYl 278 (465)
T KOG3846|consen 255 VGNV--PL-----QLH---------DWGVDFACWCSYKYL 278 (465)
T ss_pred hcCC--ce-----EEe---------ecCCceEEEeeeccc
Confidence 5433 11 112 457777788777766
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=84.12 E-value=61 Score=34.27 Aligned_cols=86 Identities=21% Similarity=0.244 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGW 405 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 405 (464)
.+++..+++-.....|...|++.|-++.. -.||=.+++.-.. +..++..+.++ ++|-++- -.++.
T Consensus 392 gL~~IArrvh~~T~~l~~~l~~aghel~~--k~fFDTLkI~~~~------s~~~~l~rA~~-~~iNlr~------~ed~t 456 (1001)
T KOG2040|consen 392 GLKEIARRVHNLTLILAEGLKNAGHELQH--KPFFDTLKIRCGC------SAEEVLDRAAK-RQINLRL------VEDGT 456 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhhcc--ccccceEEEEecC------cHHHHHHHHHh-hcCceEE------eecCc
Confidence 35555555666667788888887755542 2366555443211 12245556554 4566552 13566
Q ss_pred EEEEeec-CCHHHHHHHHHHHH
Q 037587 406 FRICFAN-ITEETLQVALQRIK 426 (464)
Q Consensus 406 ~Ris~~~-~~~e~l~~~l~~l~ 426 (464)
+-+++-. +++++++.++..+.
T Consensus 457 igvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 457 IGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred eEEeecccccHHHHHHHHHHHc
Confidence 7788755 57888888877664
No 397
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=82.03 E-value=14 Score=34.97 Aligned_cols=141 Identities=13% Similarity=0.170 Sum_probs=82.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+..+-|+||.|++..=..+..-+.+.|-++++.+-.=.+..+. ++.. | ++..+-+|-. +.+++.+..++.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~-g-~~~~y~cdis-----~~eei~~~a~~V 108 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI-G-EAKAYTCDIS-----DREEIYRLAKKV 108 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc-C-ceeEEEecCC-----CHHHHHHHHHHH
Confidence 5666788888888877888788889998775554433333333 3333 5 5555555522 456666666655
Q ss_pred hhcCCceEEEEEeCCC---CCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 184 QTLNLKVKGVLITNPS---NPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~---NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
.++.+.+. |+++|.. .-...-.+.+++++..++ |+ .+. +.....+++.|- ..
T Consensus 109 k~e~G~V~-ILVNNAGI~~~~~ll~~~d~ei~k~~~v----N~-------~~~---------f~t~kaFLP~M~----~~ 163 (300)
T KOG1201|consen 109 KKEVGDVD-ILVNNAGIVTGKKLLDCSDEEIQKTFDV----NT-------IAH---------FWTTKAFLPKML----EN 163 (300)
T ss_pred HHhcCCce-EEEeccccccCCCccCCCHHHHHHHHHH----hh-------HHH---------HHHHHHHhHHHH----hc
Confidence 55555665 6777763 223334688888887775 22 111 122222333220 12
Q ss_pred CCCcEEEEcCCCcCCCCCc
Q 037587 261 LWSRIHIVYSLSKDFSMPG 279 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~~G 279 (464)
+.++++.+.|..-.+|.+|
T Consensus 164 ~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 164 NNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred CCceEEEehhhhcccCCcc
Confidence 5578888888877777666
No 398
>PRK04296 thymidine kinase; Provisional
Probab=78.33 E-value=38 Score=29.94 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
++.++..+.++ ...|.+|++..|.+.. ....+... |..+..+.. ...+.+.+.+.+ ...+..+|+
T Consensus 16 TT~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~~l-g~~~~~~~~-------~~~~~~~~~~~~---~~~~~dvvi 83 (190)
T PRK04296 16 STELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVSRI-GLSREAIPV-------SSDTDIFELIEE---EGEKIDCVL 83 (190)
T ss_pred HHHHHHHHHHH-HHcCCeEEEEeccccccccCCcEecCC-CCcccceEe-------CChHHHHHHHHh---hCCCCCEEE
Confidence 34666665544 4568888887774332 22233333 543332221 123444444433 123567777
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
+..- ..++.+++.++++.++..++.+|+=.-..
T Consensus 84 IDEa-----q~l~~~~v~~l~~~l~~~g~~vi~tgl~~ 116 (190)
T PRK04296 84 IDEA-----QFLDKEQVVQLAEVLDDLGIPVICYGLDT 116 (190)
T ss_pred EEcc-----ccCCHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 7755 45777878889999888888777654443
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=77.29 E-value=9.2 Score=34.94 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=53.4
Q ss_pred EEEeCC-hHHHHHHHHHHhcCCCCeEE-EcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 112 LVLTAG-STAANETLMFCLADPGDAFL-LPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 112 i~it~G-~~~al~~~~~~l~~~gd~Vl-v~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
|+++.+ +..+ ..++.+|++++-.|. +..+.-......++.. |++++..+++ |.+.|.++++ .
T Consensus 1 I~V~GatG~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~-g~~vv~~d~~-------~~~~l~~al~-------g 64 (233)
T PF05368_consen 1 ILVTGATGNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQAL-GAEVVEADYD-------DPESLVAALK-------G 64 (233)
T ss_dssp EEEETTTSHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT-TTEEEES-TT--------HHHHHHHHT-------T
T ss_pred CEEECCccHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcc-cceEeecccC-------CHHHHHHHHc-------C
Confidence 344444 3333 344455555664333 2333211122233445 9988866543 6789988886 5
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEE
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVS 227 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~ 227 (464)
...|+++.|.+. .-..+.-..+++.|.+.|+-.++
T Consensus 65 ~d~v~~~~~~~~---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 65 VDAVFSVTPPSH---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp CSEEEEESSCSC---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred CceEEeecCcch---hhhhhhhhhHHHhhhccccceEE
Confidence 566777666433 22235778899999988876554
No 400
>PRK08265 short chain dehydrogenase; Provisional
Probab=71.93 E-value=45 Score=30.93 Aligned_cols=101 Identities=13% Similarity=0.002 Sum_probs=53.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|++..=..+...|++.|..|++..-.-.......... +.++..++.|- -+.+.+.+.++...+...
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g 79 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDI-----TDDAAIERAVATVVARFG 79 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 345677766665555666677888988777643322222233333 54555566553 245667666665444434
Q ss_pred ceEEEEEeCCC--CCCCCCCCHHHHHHHHH
Q 037587 189 KVKGVLITNPS--NPLGTAMTHQELNHLIN 216 (464)
Q Consensus 189 ~~~~vil~~P~--NPtG~~~s~~~l~~i~~ 216 (464)
+++.++ .|.. .+.+...+.+++++..+
T Consensus 80 ~id~lv-~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 80 RVDILV-NLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCCEEE-ECCCCCCCCcCcCCHHHHHHHHh
Confidence 666544 4432 22223345555555443
No 401
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=71.67 E-value=35 Score=30.93 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=62.5
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeE---EEcCCC----CC----C---hhhhcccCCCcEEEEEecCCCCCcccCHHHHH
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAF---LLPTPY----YP----G---FDRDLKWRPGVEIVPIHCSSSNGFRITISALE 177 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~V---lv~~p~----y~----~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 177 (464)
+.+-+|+-.....+..++ +.|-.| +...|. |. + ....+..+ |.+++....+. ...-..++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~-gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 4 IALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAM-GIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhc-CCceEEEecCc--cchhhHHHHH
Confidence 567788888877776665 344222 111111 11 1 11223444 88888877653 2233578888
Q ss_pred HHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 178 NAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 178 ~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+++++. +..+|+ +|.++|..+.+++=.+|++.|+..+
T Consensus 80 ~~l~~l-----~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRL-----KVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhC-----cccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 888753 444544 7899999999999999999997654
No 402
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=70.80 E-value=64 Score=31.04 Aligned_cols=60 Identities=22% Similarity=0.267 Sum_probs=42.6
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
+..++.+++++.++.....-.+...|+++ -+=|.| ++.+...++++.|++.+..+++|-.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECC
Confidence 45677777777776654422344544443 456766 6778999999999999999999953
No 403
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=62.54 E-value=47 Score=28.07 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=57.5
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC-eEEEcCCC--CCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 112 LVLTAGSTAANETLMFCLADPGD-AFLLPTPY--YPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd-~Vlv~~p~--y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++||.|++..=..+.+.|++.|+ .|++.... ..... ..+... +.++..+++|- -+.+.+++.++....
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-GAKITFIECDL-----SDPESIRALIEEVIK 76 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-TSEEEEEESET-----TSHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-ccccccccccc-----ccccccccccccccc
Confidence 56776666666666667777765 44444433 12122 222334 67888888763 256888888877765
Q ss_pred cCCceEEEEEeCCCCCCCCC--CCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPSNPLGTA--MTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~--~s~~~l~~i~~~ 217 (464)
.......+|.+....+.+.. ++.+++++....
T Consensus 77 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 77 RFGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhhcccc
Confidence 55677766665443333333 345666666554
No 404
>PRK06483 dihydromonapterin reductase; Provisional
Probab=62.40 E-value=89 Score=28.25 Aligned_cols=77 Identities=9% Similarity=0.110 Sum_probs=41.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.+++|.|+...=..+...|.+.|..|++..-.-.......... |+..+..++ -+.+.+++.+++......++
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~-------~~~~~~~~~~~~~~~~~~~i 75 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-GAQCIQADF-------STNAGIMAFIDELKQHTDGL 75 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCEEEEcCC-------CCHHHHHHHHHHHHhhCCCc
Confidence 4677776665556666677788888776543322222223333 544443332 24566666666554333356
Q ss_pred EEEEE
Q 037587 191 KGVLI 195 (464)
Q Consensus 191 ~~vil 195 (464)
+.++.
T Consensus 76 d~lv~ 80 (236)
T PRK06483 76 RAIIH 80 (236)
T ss_pred cEEEE
Confidence 64443
No 405
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=61.12 E-value=16 Score=35.50 Aligned_cols=57 Identities=18% Similarity=0.334 Sum_probs=38.7
Q ss_pred CCCeEEEcCCCCC-ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCC
Q 037587 132 PGDAFLLPTPYYP-GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN-PSNPLGT 204 (464)
Q Consensus 132 ~gd~Vlv~~p~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~ 204 (464)
++.+|++-+.+.. ...+.+... |+++.-+|.+ -+.+++.+. +++.|+++| |.+|.-.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~r-g~~vtVVP~~------t~~eeIl~~---------~pDGiflSNGPGDP~~~ 236 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKR-GCRVTVVPAD------TSAEEILAL---------NPDGIFLSNGPGDPAPL 236 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHC-CCeEEEEcCC------CCHHHHHhh---------CCCEEEEeCCCCChhHH
Confidence 4567777776653 455556566 9999988865 355665543 788999987 6888433
No 406
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=60.75 E-value=1.3e+02 Score=28.79 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.+=|.++.+...+..+..++ |+.+.|+ .+++.++-.+- +-| |.|++..|.|..... . |
T Consensus 56 ~eEr~~v~~~~v~~~~grvp-----viaG~g~~~t~eai~lak~a~-~~Gad~il~v~PyY~k~~~----~-g------- 117 (299)
T COG0329 56 LEERKEVLEAVVEAVGGRVP-----VIAGVGSNSTAEAIELAKHAE-KLGADGILVVPPYYNKPSQ----E-G------- 117 (299)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----EEEecCCCcHHHHHHHHHHHH-hcCCCEEEEeCCCCcCCCh----H-H-------
Confidence 45566666665544332221 6665554 45565554332 334 889999998853220 0 0
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
-.+.+....+. . +..++++++| +.||..++.+.+.++++ -.+++=|=|.
T Consensus 118 ---------l~~hf~~ia~a----~-~lPvilYN~P-~~tg~~l~~e~i~~la~---~~nivgiKd~ 166 (299)
T COG0329 118 ---------LYAHFKAIAEA----V-DLPVILYNIP-SRTGVDLSPETIARLAE---HPNIVGVKDS 166 (299)
T ss_pred ---------HHHHHHHHHHh----c-CCCEEEEeCc-cccCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 12333333332 1 4557888888 89999999888777766 2355555454
No 407
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.52 E-value=44 Score=28.88 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=50.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|+++.|+...=..++..|++.|-.|....-.-..... .. +++++..++ .|++.+.+++. +.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~-~~~~~~~d~-------~d~~~~~~al~-------~~d 62 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SP-GVEIIQGDL-------FDPDSVKAALK-------GAD 62 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CT-TEEEEESCT-------TCHHHHHHHHT-------TSS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cc-ccccceeee-------hhhhhhhhhhh-------hcc
Confidence 4555553334444556666667555544333222222 23 777665543 36788888875 456
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
.|+.+-+.++. .....+.+++.|++.++
T Consensus 63 ~vi~~~~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 63 AVIHAAGPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp EEEECCHSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhhhhhhhcc----ccccccccccccccccc
Confidence 66665543333 25667788888877654
No 408
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=60.28 E-value=1e+02 Score=28.24 Aligned_cols=80 Identities=11% Similarity=0.125 Sum_probs=41.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-..-...+... ++.. +++|- -|.+.+++.++.......
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~~~~--~~~Dl-----~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-GVFT--IKCDV-----GNRDQVKKSKEVVEKEFG 78 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-CCeE--EEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345677766665555666677888877765421111111112222 3333 34332 256777777766544444
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
+++.++.+
T Consensus 79 ~id~li~~ 86 (255)
T PRK06463 79 RVDVLVNN 86 (255)
T ss_pred CCCEEEEC
Confidence 66755544
No 409
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=59.64 E-value=34 Score=32.58 Aligned_cols=110 Identities=19% Similarity=0.279 Sum_probs=58.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCC--CC-eEEEcCCCCCChhhhcccCCC-cEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADP--GD-AFLLPTPYYPGFDRDLKWRPG-VEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~--gd-~Vlv~~p~y~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.+++|.|+.=.=...++.+++. .+ .+.+...+|.+-...++...+ -++..+..|- -|.+.+.+.+.+.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~--- 73 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEY--- 73 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhc---
Confidence 3677777654444444444432 24 467788899876665443323 2444444331 2567777777652
Q ss_pred CCceEEEE-----------EeCC-----CCCCCCCCCHHHHHHHHHHHhhCC-----eEEEEeccccccccC
Q 037587 187 NLKVKGVL-----------ITNP-----SNPLGTAMTHQELNHLINFSKSKR-----IHIVSDEIYSGTVFD 237 (464)
Q Consensus 187 ~~~~~~vi-----------l~~P-----~NPtG~~~s~~~l~~i~~~~~~~~-----~~lI~Deay~~~~~~ 237 (464)
++.+|+ |..| .|-.|+. .|++.++++. ++|=.||+|+++..+
T Consensus 74 --~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~-------~LLEaar~~~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 74 --QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTY-------TLLEAARKYWGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred --CCCeEEEechhccccccccChhhhhhcchHHHH-------HHHHHHHHhcccceEEEeccccccccccCC
Confidence 333332 1122 2333432 2445555554 244579999987664
No 410
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=59.30 E-value=1.1e+02 Score=27.47 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=56.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+....|++..|+..|...+ ..|++.|-.|.+-+|....-....... | ++..+. +.| ..+.+.
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~-~-~i~~~~----~~~--~~~dl~--------- 68 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQ-G-GITWLA----RCF--DADILE--------- 68 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHc-C-CEEEEe----CCC--CHHHhC---------
Confidence 4455788888888888777 566677878888888765433333323 3 343333 122 222221
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE-EEeccc
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI-VSDEIY 231 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l-I~Deay 231 (464)
...+ ++..|++| +.-+.+...|++.++++ ++|+.-
T Consensus 69 --~~~l-Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 69 --GAFL-VIAATDDE-------ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred --CcEE-EEECCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 3344 44445443 23456888898888776 356543
No 411
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=58.50 E-value=1.8e+02 Score=28.08 Aligned_cols=126 Identities=11% Similarity=0.187 Sum_probs=70.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC---ChhhhcccCCC
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP---GFDRDLKWRPG 155 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~~g 155 (464)
.|....|.......+++.+. -+...++++.++..+-.++- +. .+--|++..-+-+ ........- |
T Consensus 66 ~~~na~~~~~~a~~iarql~--------~~~~dviv~i~tp~Aq~~~s-~~--~~iPVV~aavtd~v~a~Lv~~~~~p-g 133 (322)
T COG2984 66 DYQNAQGDLGTAAQIARQLV--------GDKPDVIVAIATPAAQALVS-AT--KTIPVVFAAVTDPVGAKLVKSLEQP-G 133 (322)
T ss_pred EeecCCCChHHHHHHHHHhh--------cCCCcEEEecCCHHHHHHHH-hc--CCCCEEEEccCchhhccCCccccCC-C
Confidence 45566788888888888875 24446777776665544432 32 1223444433221 111112222 4
Q ss_pred cEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE-EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 156 VEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV-LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 156 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v-il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
..+..+. + ..+.++-.++++. --++.+-| ++.||+-+ .|...++++.+.+++.|+-+++=-
T Consensus 134 ~NvTGvs----D--~~~v~q~i~lik~---~~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~~ 195 (322)
T COG2984 134 GNVTGVS----D--LLPVAQQIELIKA---LLPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEAA 195 (322)
T ss_pred CceeecC----C--cchHHHHHHHHHH---hCCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEEe
Confidence 5565553 1 1234444443333 23455556 78888654 455689999999999999888543
No 412
>PRK06500 short chain dehydrogenase; Provisional
Probab=58.15 E-value=1e+02 Score=28.04 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=43.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|. -|.+.+.+.++...+..++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADA-----GDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHhCC
Confidence 35677766666666666777788877766543222122222233 55555565542 2455555555444333345
Q ss_pred eEEEEEe
Q 037587 190 VKGVLIT 196 (464)
Q Consensus 190 ~~~vil~ 196 (464)
++.++.+
T Consensus 81 id~vi~~ 87 (249)
T PRK06500 81 LDAVFIN 87 (249)
T ss_pred CCEEEEC
Confidence 6655543
No 413
>PRK05872 short chain dehydrogenase; Provisional
Probab=56.93 E-value=95 Score=29.47 Aligned_cols=104 Identities=12% Similarity=0.105 Sum_probs=54.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
+....++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+.+|- -|.+.+++.+++...
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34456778777766666666778888988877654322222222222 134555555442 256777777666544
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
..++++. +++|.. ...+. ..+.+++++.++
T Consensus 82 ~~g~id~-vI~nAG~~~~~~~~~~~~~~~~~~~~ 114 (296)
T PRK05872 82 RFGGIDV-VVANAGIASGGSVAQVDPDAFRRVID 114 (296)
T ss_pred HcCCCCE-EEECCCcCCCcCcccCCHHHHHHHHH
Confidence 4446665 444442 22221 234555555443
No 414
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=56.65 E-value=1.2e+02 Score=27.46 Aligned_cols=82 Identities=13% Similarity=-0.002 Sum_probs=43.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|++.|..|.+............... +.++..++.|- -+.+.+++.+.+..+...
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 79 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANL-----SDRDEVKALGQKAEADLE 79 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345677766655555566778888887766544332222222222 33444444442 145666666655443334
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
+++++|.+
T Consensus 80 ~id~vi~~ 87 (245)
T PRK12936 80 GVDILVNN 87 (245)
T ss_pred CCCEEEEC
Confidence 66765554
No 415
>PRK07063 short chain dehydrogenase; Provisional
Probab=55.27 E-value=1.3e+02 Score=27.57 Aligned_cols=83 Identities=11% Similarity=0.074 Sum_probs=44.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC----CCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR----PGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....+++|.|+...=..+...|++.|..|++..-.-.......... .+.++..+..|- -+.+.+.+.+++.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~ 80 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV-----TDAASVAAAVAAA 80 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC-----CCHHHHHHHHHHH
Confidence 3445777777666556666778888988776543222122111110 144555666553 2456666666554
Q ss_pred hhcCCceEEEEE
Q 037587 184 QTLNLKVKGVLI 195 (464)
Q Consensus 184 ~~~~~~~~~vil 195 (464)
.....+++.++.
T Consensus 81 ~~~~g~id~li~ 92 (260)
T PRK07063 81 EEAFGPLDVLVN 92 (260)
T ss_pred HHHhCCCcEEEE
Confidence 433346665444
No 416
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=54.78 E-value=76 Score=29.32 Aligned_cols=100 Identities=16% Similarity=0.206 Sum_probs=60.8
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCeEEEcCCCCCChhhhcccCCC-cEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANE-TLMFCLADPGDAFLLPTPYYPGFDRDLKWRPG-VEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~-~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.|++-+|++.+|- .+.+.|.+.|-+|+...=--......+... + .++..+.+|- -|.+.+++.+......-.
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEI-GAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-ccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 4666666666665 455668889988887765444444445545 5 3455555542 266777777776665556
Q ss_pred ceEEEEEeCCCCCCCCC---CCHHHHHHHHHH
Q 037587 189 KVKGVLITNPSNPLGTA---MTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~---~s~~~l~~i~~~ 217 (464)
+++ ++++|..--.|.- ...++++.+++.
T Consensus 81 ~iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RID-ILVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred ccc-EEEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 777 5666664333332 355667666664
No 417
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=53.47 E-value=1.3e+02 Score=27.66 Aligned_cols=81 Identities=7% Similarity=-0.016 Sum_probs=46.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|.+|++....-.......... +.++..+..|- -|.+.+++.++.......+
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDV-----TRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHcCC
Confidence 45777777666666666778888988877665443222222222 33455555542 2556777766655444446
Q ss_pred eEEEEEe
Q 037587 190 VKGVLIT 196 (464)
Q Consensus 190 ~~~vil~ 196 (464)
++.++.+
T Consensus 81 id~li~~ 87 (257)
T PRK07067 81 IDILFNN 87 (257)
T ss_pred CCEEEEC
Confidence 6765544
No 418
>PRK06182 short chain dehydrogenase; Validated
Probab=53.10 E-value=1.3e+02 Score=27.85 Aligned_cols=97 Identities=11% Similarity=0.104 Sum_probs=48.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++..-.-..... .... ++.++..++. |.+.+++.+++......++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~~-~~~~~~~Dv~-------~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LASL-GVHPLSLDVT-------DEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCC
Confidence 46676665555555556677788887765432221111 1122 5555544432 5667776666554444466
Q ss_pred EEEEEeCCCCCCCC--CCCHHHHHHHHH
Q 037587 191 KGVLITNPSNPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 191 ~~vil~~P~NPtG~--~~s~~~l~~i~~ 216 (464)
+.+|.+-...+.|. ..+.++++.+.+
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~ 103 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFE 103 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHh
Confidence 65544322233332 224445554443
No 419
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=53.02 E-value=1.2e+02 Score=27.72 Aligned_cols=83 Identities=14% Similarity=0.101 Sum_probs=46.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
...++||.|++..=..+...|++.|..|++....-. ......... +.++..+..|- -+.+.+++.+++.....
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADL-----IQQKDIDSIVSQAVEVM 81 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCC-----CCHHHHHHHHHHHHHHc
Confidence 345677777666666677778889988876532110 011112223 55666666553 25677777766554444
Q ss_pred CceEEEEEeCC
Q 037587 188 LKVKGVLITNP 198 (464)
Q Consensus 188 ~~~~~vil~~P 198 (464)
.+++.+ +.|.
T Consensus 82 g~iD~l-v~~a 91 (251)
T PRK12481 82 GHIDIL-INNA 91 (251)
T ss_pred CCCCEE-EECC
Confidence 466644 4444
No 420
>PRK05717 oxidoreductase; Validated
Probab=52.22 E-value=1.4e+02 Score=27.32 Aligned_cols=83 Identities=8% Similarity=-0.035 Sum_probs=43.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|.+|++.+..-.......... +.++..+..|- -+.+.+.+.+++.....
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~ 82 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDV-----ADEAQVAAGVAEVLGQF 82 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3345777776655555666677788888877654332222222223 44455555442 24566666555543333
Q ss_pred CceEEEEEe
Q 037587 188 LKVKGVLIT 196 (464)
Q Consensus 188 ~~~~~vil~ 196 (464)
++++.++.+
T Consensus 83 g~id~li~~ 91 (255)
T PRK05717 83 GRLDALVCN 91 (255)
T ss_pred CCCCEEEEC
Confidence 356655443
No 421
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=50.32 E-value=1.1e+02 Score=27.66 Aligned_cols=35 Identities=14% Similarity=0.255 Sum_probs=27.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTP 141 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p 141 (464)
.....|+||.|++..=..+...|.+-|.+|++..=
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR 37 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGR 37 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC
Confidence 34567899999887777777788888999998753
No 422
>smart00642 Aamy Alpha-amylase domain.
Probab=48.92 E-value=76 Score=27.43 Aligned_cols=26 Identities=15% Similarity=0.451 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 207 THQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 207 s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
+.++++++++.|+++|+.||.|-+..
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45899999999999999999997765
No 423
>PRK07825 short chain dehydrogenase; Provisional
Probab=48.81 E-value=1.4e+02 Score=27.76 Aligned_cols=82 Identities=10% Similarity=-0.020 Sum_probs=40.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... + ++..+..|- -|.+.+.+.++.......
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~-~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-G-LVVGGPLDV-----TDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-cceEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345667666554445555667778877766542211111112222 2 233344332 146777766666544434
Q ss_pred ceEEEEEeCC
Q 037587 189 KVKGVLITNP 198 (464)
Q Consensus 189 ~~~~vil~~P 198 (464)
++..+ +.|.
T Consensus 78 ~id~l-i~~a 86 (273)
T PRK07825 78 PIDVL-VNNA 86 (273)
T ss_pred CCCEE-EECC
Confidence 56644 4444
No 424
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=48.75 E-value=1.6e+02 Score=26.57 Aligned_cols=96 Identities=13% Similarity=0.215 Sum_probs=58.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++...|++..|+..+...+ ..|++.|..|.+-.|... ......... +...+. +. .+.+.+.
T Consensus 10 l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~-~i~~~~------~~--~~~~~~~-------- 71 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEG-KIKWIE------RE--FDAEDLD-------- 71 (210)
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhc-Ccchhh------cc--cChhhhc--------
Confidence 4556799999999999987 667789999999999883 233333322 311111 12 2333332
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE-EEeccc
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI-VSDEIY 231 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l-I~Deay 231 (464)
...+|+++.. | .+.=+++.+.|+++++++ ++|+.-
T Consensus 72 ---~~~lviaAt~-d-------~~ln~~i~~~a~~~~i~vNv~D~p~ 107 (210)
T COG1648 72 ---DAFLVIAATD-D-------EELNERIAKAARERRILVNVVDDPE 107 (210)
T ss_pred ---CceEEEEeCC-C-------HHHHHHHHHHHHHhCCceeccCCcc
Confidence 3344454422 2 256678889999988655 455543
No 425
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=47.61 E-value=2.5e+02 Score=26.92 Aligned_cols=108 Identities=19% Similarity=0.243 Sum_probs=61.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--eEEEc--CCCCCChh--hhcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGD--AFLLP--TPYYPGFD--RDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~--~p~y~~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
+...++++|.|.+.+...++....+.|. +|++. .|.+.+.. ..++.. |.++..+. | .++...+
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~-gI~~~~I~---------D-sa~~~~~ 185 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQS-GIPVTVIV---------D-SAVGAFM 185 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHc-CCceEEEe---------c-hHHHHHH
Confidence 4567899999988888888888777775 55554 45555432 224555 87777775 1 2333333
Q ss_pred HHHhhcCCceEEEEEe-CCCCCCCCCCCHHHHHHHHHHHhhCCeEEE-Eecccc
Q 037587 181 QQAQTLNLKVKGVLIT-NPSNPLGTAMTHQELNHLINFSKSKRIHIV-SDEIYS 232 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~-~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI-~Deay~ 232 (464)
+ ++..|++- ..---.|.+++.-----|+..|++.+.+++ +=|.|-
T Consensus 186 ~-------~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 186 S-------RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred H-------hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 3 34445543 221222333333333346667777777654 556665
No 426
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=47.35 E-value=1.6e+02 Score=26.58 Aligned_cols=85 Identities=13% Similarity=0.062 Sum_probs=44.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
....++||.|+...=..+...|++.|..|++..-.-.......... .+.++..+..|- .|.+.+...+++....
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3446777766655555566667778877766543322222221111 034455555542 3567777766654333
Q ss_pred CCceEEEEEeC
Q 037587 187 NLKVKGVLITN 197 (464)
Q Consensus 187 ~~~~~~vil~~ 197 (464)
..++++||.+.
T Consensus 79 ~~~~d~vi~~a 89 (251)
T PRK07231 79 FGSVDILVNNA 89 (251)
T ss_pred hCCCCEEEECC
Confidence 34667655543
No 427
>PRK06194 hypothetical protein; Provisional
Probab=47.33 E-value=1.8e+02 Score=27.19 Aligned_cols=80 Identities=15% Similarity=0.113 Sum_probs=44.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.|+...=..+...|++.|..|++.+-.-....... ... +.++..+..|- -|.+.+++.+....+.
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~~~~~~~~~~~~ 80 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDV-----SDAAQVEALADAALER 80 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 45777776665555666677788888776653322122221 112 55666666542 2566777766654444
Q ss_pred CCceEEEEE
Q 037587 187 NLKVKGVLI 195 (464)
Q Consensus 187 ~~~~~~vil 195 (464)
..+++.|+.
T Consensus 81 ~g~id~vi~ 89 (287)
T PRK06194 81 FGAVHLLFN 89 (287)
T ss_pred cCCCCEEEE
Confidence 445665443
No 428
>PRK06196 oxidoreductase; Provisional
Probab=47.11 E-value=1.2e+02 Score=29.03 Aligned_cols=81 Identities=12% Similarity=0.126 Sum_probs=40.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|...|..|++..-.-...........++.. +..|- -|.+.+++.+++.....
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~--~~~Dl-----~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEV--VMLDL-----ADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeE--EEccC-----CCHHHHHHHHHHHHhcC
Confidence 344567766655444455566777887777653221111111211112333 33331 25677777776654433
Q ss_pred CceEEEEE
Q 037587 188 LKVKGVLI 195 (464)
Q Consensus 188 ~~~~~vil 195 (464)
.+++.+|.
T Consensus 98 ~~iD~li~ 105 (315)
T PRK06196 98 RRIDILIN 105 (315)
T ss_pred CCCCEEEE
Confidence 46665443
No 429
>PRK06841 short chain dehydrogenase; Provisional
Probab=46.97 E-value=2.1e+02 Score=26.07 Aligned_cols=82 Identities=12% Similarity=0.047 Sum_probs=42.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. ........+.++..++.|- -+.+.+++.++.......
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLLGGNAKGLVCDV-----SDSQSVEAAVAAVISAFG 88 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhhCCceEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 3456777655555455556677888887765543221 1111111133444555442 256666666665443334
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
++++++.+
T Consensus 89 ~~d~vi~~ 96 (255)
T PRK06841 89 RIDILVNS 96 (255)
T ss_pred CCCEEEEC
Confidence 56655544
No 430
>PRK06179 short chain dehydrogenase; Provisional
Probab=46.09 E-value=2.4e+02 Score=25.95 Aligned_cols=97 Identities=12% Similarity=0.108 Sum_probs=51.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|..|++..-.-.. .....++.++..++. |.+.++++++.......+
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~----~~~~~~~~~~~~D~~-------d~~~~~~~~~~~~~~~g~ 73 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPAR----AAPIPGVELLELDVT-------DDASVQAAVDEVIARAGR 73 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhh----ccccCCCeeEEeecC-------CHHHHHHHHHHHHHhCCC
Confidence 346776666555555666677888887765532211 111125555444432 567777777765444446
Q ss_pred eEEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q 037587 190 VKGVLITNPSNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~NPtG~--~~s~~~l~~i~~~ 217 (464)
++.+|.+.-..+.|. ..+.++.+++.+.
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~ 103 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDT 103 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHH
Confidence 665544432222222 2355556555553
No 431
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=44.96 E-value=32 Score=33.11 Aligned_cols=61 Identities=16% Similarity=0.349 Sum_probs=41.0
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+..+..+.+..+.+|.+....+.+.-+. +.. .++ .+.|..++.+++++|++.|+++|+-||
T Consensus 29 K~N~lhlHl~D~~~~~le~~~~p~l~~~----g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 29 KINTFHWHLTDDQAWRIESKKFPELAEK----GGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred CCcEEEEeeecCCCceEeeCccchhhhh----ccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 6777777776566677765555443221 101 122 244558999999999999999998877
No 432
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.70 E-value=1.3e+02 Score=27.27 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCCcEEEeCChHHHHHHHHH-HhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh-
Q 037587 108 DPNKLVLTAGSTAANETLMF-CLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT- 185 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~-~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~- 185 (464)
.+.-|+||.+++.+|-.++. -|.+.|-.|+...-.-..+....... |+.+..+++. +.+.+.+...+.++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-gl~~~kLDV~-------~~~~V~~v~~evr~~ 77 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-GLKPYKLDVS-------KPEEVVTVSGEVRAN 77 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-CCeeEEeccC-------ChHHHHHHHHHHhhC
Confidence 45678999999999876654 47888888888776666666555455 8888777764 23444444443333
Q ss_pred cCCceEEEEEeCCCCC
Q 037587 186 LNLKVKGVLITNPSNP 201 (464)
Q Consensus 186 ~~~~~~~vil~~P~NP 201 (464)
.+.+.. ++++|..-|
T Consensus 78 ~~Gkld-~L~NNAG~~ 92 (289)
T KOG1209|consen 78 PDGKLD-LLYNNAGQS 92 (289)
T ss_pred CCCceE-EEEcCCCCC
Confidence 334555 355555433
No 433
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=44.37 E-value=59 Score=26.05 Aligned_cols=43 Identities=23% Similarity=0.339 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCcc
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
+++.++++++||.+ +++-+.. ++|+-..+++.|..++++...|
T Consensus 108 El~~ylvR~k~iPi-------------LelkYP~-s~Eea~~~VnkI~~FL~sLe~~ 150 (152)
T COG4050 108 ELCVYLVRRKGIPI-------------LELKYPR-SEEEAIDFVNKIANFLKSLEAQ 150 (152)
T ss_pred hHHHHHhhhcCCce-------------EEEeCCC-cHHHHHHHHHHHHHHHHhhhhh
Confidence 46677777666655 4566653 7889999999999999988754
No 434
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=43.98 E-value=2.5e+02 Score=25.43 Aligned_cols=82 Identities=12% Similarity=0.126 Sum_probs=45.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
....++||.|+...=..+...|++.|..|++..-.-. ......... +.++..++.|- -+.+.+.+.++.....
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADL-----SDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 4456778777666556666778888987776543211 111112223 44555565542 2466777666654433
Q ss_pred CCceEEEEE
Q 037587 187 NLKVKGVLI 195 (464)
Q Consensus 187 ~~~~~~vil 195 (464)
..+++.++.
T Consensus 78 ~~~~d~li~ 86 (248)
T TIGR01832 78 FGHIDILVN 86 (248)
T ss_pred cCCCCEEEE
Confidence 446665543
No 435
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=43.89 E-value=66 Score=26.76 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=40.8
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC-HHHHHHHHHHHhhC--CeE-EEEecccc
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT-HQELNHLINFSKSK--RIH-IVSDEIYS 232 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s-~~~l~~i~~~~~~~--~~~-lI~Deay~ 232 (464)
..+.+.|.+.+++. ++..+|+-.|-|..|..-+ ....+++++...+. ++. .++||-|.
T Consensus 37 ~~~~~~l~~li~~~-----~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 37 EKDIEELKKLIEEY-----QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCHHHHHHHHHHC-----CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred chHHHHHHHHHHHh-----CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 46789999998873 7889999999887776543 23466666555443 654 46899885
No 436
>PRK06139 short chain dehydrogenase; Provisional
Probab=43.84 E-value=1.9e+02 Score=28.08 Aligned_cols=102 Identities=13% Similarity=0.197 Sum_probs=52.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.+++..=..+...|.+.|..|++..-.-.... ..+... |.++..+++|- -|.+.+++.++...
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~~~~~~~ 79 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-GAEVLVVPTDV-----TDADQVKALATQAA 79 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 3445666666555555555667788888776543221111 112223 66666666542 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
+...+++.+ ++|.. ...|. -.+.++++++.+
T Consensus 80 ~~~g~iD~l-VnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 80 SFGGRIDVW-VNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred HhcCCCCEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 444466654 44442 22222 234455554444
No 437
>PRK05693 short chain dehydrogenase; Provisional
Probab=43.75 E-value=2.2e+02 Score=26.38 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=40.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++||.|+...=..+...+.+.|..|++..-.-..... .... +...+..++. +.+.+++.++...+...+++
T Consensus 4 vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~-~~~~~~~Dl~-------~~~~~~~~~~~~~~~~~~id 74 (274)
T PRK05693 4 VLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAAA-GFTAVQLDVN-------DGAALARLAEELEAEHGGLD 74 (274)
T ss_pred EEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHC-CCeEEEeeCC-------CHHHHHHHHHHHHHhcCCCC
Confidence 5666665555555666677788887765433221111 1222 4444444432 45667666665544444666
Q ss_pred EEEEe
Q 037587 192 GVLIT 196 (464)
Q Consensus 192 ~vil~ 196 (464)
.+|.+
T Consensus 75 ~vi~~ 79 (274)
T PRK05693 75 VLINN 79 (274)
T ss_pred EEEEC
Confidence 55443
No 438
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=43.50 E-value=2.5e+02 Score=25.40 Aligned_cols=76 Identities=7% Similarity=0.052 Sum_probs=43.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....+++|.|+...=..+...|++.|..|++..-.. .... +.++..++.|- -+.+.+.+.+++.....
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQE-DYPFATFVLDV-----SDAAAVAQVCQRLLAET 74 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhc-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 345677777766555566667778888777765432 1222 44555555542 24567777666544433
Q ss_pred CceEEEEE
Q 037587 188 LKVKGVLI 195 (464)
Q Consensus 188 ~~~~~vil 195 (464)
+++++++.
T Consensus 75 ~~id~vi~ 82 (252)
T PRK08220 75 GPLDVLVN 82 (252)
T ss_pred CCCCEEEE
Confidence 45665543
No 439
>PRK07024 short chain dehydrogenase; Provisional
Probab=43.43 E-value=2.2e+02 Score=26.10 Aligned_cols=81 Identities=15% Similarity=0.050 Sum_probs=43.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC--CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR--PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.++||.|++..=..+...|.+.|..|++..-.-.......... .+ ++..+.+|- -+.+.+.+.+++.....+
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl-----~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADV-----RDADALAAAAADFIAAHG 77 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCC-----CCHHHHHHHHHHHHHhCC
Confidence 4777776665555666667788888777653322221111111 02 555565543 246777777666544444
Q ss_pred ceEEEEEeCC
Q 037587 189 KVKGVLITNP 198 (464)
Q Consensus 189 ~~~~vil~~P 198 (464)
+++. ++.|.
T Consensus 78 ~id~-lv~~a 86 (257)
T PRK07024 78 LPDV-VIANA 86 (257)
T ss_pred CCCE-EEECC
Confidence 5664 44444
No 440
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=43.06 E-value=26 Score=34.12 Aligned_cols=62 Identities=18% Similarity=0.416 Sum_probs=40.6
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+..+..+.+..+.+|.+.+..+.+.-.. + + . .....+.|..++.+++++|++.|+++|+-||
T Consensus 31 KlN~lhlHLtD~~~~rle~~~~P~lt~~----g----a-~-~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 31 KLNVLHLHLTDDQGWRIEIKSWPKLTEI----G----G-S-TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred CCcEEEEEeecCCcceeeecCccccccc----c----c-c-cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 6677777776556676655554432110 0 0 0 1122456678999999999999999998877
No 441
>PRK08589 short chain dehydrogenase; Validated
Probab=42.53 E-value=2.3e+02 Score=26.35 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=52.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|++.|..|++..-. ....... ... +.++..+.+|- -+.+.+.+.++...+
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 78 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-GGKAKAYHVDI-----SDEQQVKDFASEIKE 78 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-CCeEEEEEeec-----CCHHHHHHHHHHHHH
Confidence 3456677666655556666788889888876544 3222221 222 44555555542 145666666665544
Q ss_pred cCCceEEEEEeCCC-C-CCCC--CCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-N-PLGT--AMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~-N-PtG~--~~s~~~l~~i~~ 216 (464)
...+++. ++.|.. . +.+. ..+.+++++..+
T Consensus 79 ~~g~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (272)
T PRK08589 79 QFGRVDV-LFNNAGVDNAAGRIHEYPVDVFDKIMA 112 (272)
T ss_pred HcCCcCE-EEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4445664 444442 1 2222 235555555443
No 442
>PRK05867 short chain dehydrogenase; Provisional
Probab=42.32 E-value=2.7e+02 Score=25.37 Aligned_cols=82 Identities=11% Similarity=0.208 Sum_probs=44.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....+++|.|++..=..+...|.+.|.+|++..-.-...... +... +.++..+..|- -|.+.+++.+++..
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-GGKVVPVCCDV-----SQHQQVTSMLDQVT 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHHHHHHHH
Confidence 334567777666555566667788888877654322211111 1222 44555565542 25666776666544
Q ss_pred hcCCceEEEEE
Q 037587 185 TLNLKVKGVLI 195 (464)
Q Consensus 185 ~~~~~~~~vil 195 (464)
+...+++.++.
T Consensus 82 ~~~g~id~lv~ 92 (253)
T PRK05867 82 AELGGIDIAVC 92 (253)
T ss_pred HHhCCCCEEEE
Confidence 43346665443
No 443
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=42.28 E-value=84 Score=30.04 Aligned_cols=42 Identities=7% Similarity=0.152 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++.++++.+. .++.+++.+-.- +.++-++|.++++++|+-++
T Consensus 79 ~~~l~e~~~~------gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvl 120 (291)
T PRK05678 79 ADAILEAIDA------GIDLIVCITEGI------PVLDMLEVKAYLERKKTRLI 120 (291)
T ss_pred HHHHHHHHHC------CCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEE
Confidence 4555555443 667666654432 34555689999999998877
No 444
>PRK05876 short chain dehydrogenase; Provisional
Probab=42.27 E-value=2.6e+02 Score=26.07 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=53.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|++..=..+...|...|..|++..-.-...... +... |.++..+.+|- -|.+.+.+.+++...
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-GFDVHGVMCDV-----RHREEVTHLADEAFR 79 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCHHHHHHHHHHHHH
Confidence 34577777766665666677888888877654222211111 1222 55666666552 256777777665544
Q ss_pred cCCceEEEEEeCCCC-CCC--CCCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPSN-PLG--TAMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~N-PtG--~~~s~~~l~~i~~ 216 (464)
..+++++ ++.|..- ..| ..++.++++++.+
T Consensus 80 ~~g~id~-li~nAg~~~~~~~~~~~~~~~~~~~~ 112 (275)
T PRK05876 80 LLGHVDV-VFSNAGIVVGGPIVEMTHDDWRWVID 112 (275)
T ss_pred HcCCCCE-EEECCCcCCCCCcccCCHHHHHHHHh
Confidence 4445664 4444421 112 1245555555444
No 445
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=42.09 E-value=31 Score=36.53 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=28.4
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 201 PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 201 PtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
||-..=++++++++++.|.++|+-||+|=+|..+
T Consensus 206 p~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 206 PTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred ccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 3333446799999999999999999999999863
No 446
>PF04412 DUF521: Protein of unknown function (DUF521); InterPro: IPR007506 This is a group of hypothetical proteins.
Probab=42.03 E-value=3.4e+02 Score=27.28 Aligned_cols=48 Identities=23% Similarity=0.369 Sum_probs=37.2
Q ss_pred cccCHHHHHHHHHHH-hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 169 FRITISALENAYQQA-QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 169 ~~~d~~~l~~~i~~~-~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
..++.++|++..++. ...+.++++|++-.|| +|.+|+++|+++++.++
T Consensus 268 i~i~~~dl~~~~~~l~~~~~~~~D~V~lGcPH------~S~~El~~ia~ll~gr~ 316 (400)
T PF04412_consen 268 ITITDADLEEVYEELNTAGDEKVDLVALGCPH------LSLEELREIAELLEGRK 316 (400)
T ss_pred EEeCHHHHHHHHHHhccCCCCCCCEEEECCCC------CCHHHHHHHHHHHhCCC
Confidence 445677888777776 3345688999999895 78899999999998665
No 447
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=41.70 E-value=2.7e+02 Score=25.31 Aligned_cols=83 Identities=14% Similarity=0.100 Sum_probs=46.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|++.|-.|++..-.-.... ..+... |.++..+..|- -|.+.+++.++...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 82 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-GLSAHALAFDV-----TDHDAVRAAIDAFE 82 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CceEEEEEccC-----CCHHHHHHHHHHHH
Confidence 3446777777665555666677788888877543221111 112223 55666666553 24667777766554
Q ss_pred hcCCceEEEEEe
Q 037587 185 TLNLKVKGVLIT 196 (464)
Q Consensus 185 ~~~~~~~~vil~ 196 (464)
....+++.++.+
T Consensus 83 ~~~~~~d~li~~ 94 (255)
T PRK07523 83 AEIGPIDILVNN 94 (255)
T ss_pred HhcCCCCEEEEC
Confidence 433456654443
No 448
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=41.47 E-value=2.8e+02 Score=25.34 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=45.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|++.|..|++..-. ..... ..... +.++..++.|- -+.+.+.+.+++..
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~~~~~~ 86 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-GRKVTFVQVDL-----TKPESAEKVVKEAL 86 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34567777776666666667788889887665433 22211 12222 44555555542 24566666666554
Q ss_pred hcCCceEEEEEe
Q 037587 185 TLNLKVKGVLIT 196 (464)
Q Consensus 185 ~~~~~~~~vil~ 196 (464)
...++++.+|.+
T Consensus 87 ~~~g~id~li~~ 98 (258)
T PRK06935 87 EEFGKIDILVNN 98 (258)
T ss_pred HHcCCCCEEEEC
Confidence 444466755543
No 449
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=41.14 E-value=1.9e+02 Score=26.94 Aligned_cols=94 Identities=18% Similarity=0.292 Sum_probs=54.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChhhhcccCCCcEEEEEecCCCCCccc-CHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPGFDRDLKWRPGVEIVPIHCSSSNGFRI-TISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~~ 188 (464)
+|++-.|++++-.++- .|.+.|. |++.--+ |..-. ......+.++ .. + .+ +.+.|.+.+++.
T Consensus 2 ~ILvlgGTtE~r~la~-~L~~~g~-v~~sv~t~~g~~~-~~~~~~~~~v---~~---G--~lg~~~~l~~~l~~~----- 65 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAE-RLAEAGY-VIVSVATSYGGEL-LKPELPGLEV---RV---G--RLGDEEGLAEFLREN----- 65 (249)
T ss_pred EEEEEechHHHHHHHH-HHHhcCC-EEEEEEhhhhHhh-hccccCCceE---EE---C--CCCCHHHHHHHHHhC-----
Confidence 5889999999998884 4556676 5544322 32211 1111112222 21 2 24 789999999763
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++++| .+...|.-.. --+.+.+.|++.|+..+
T Consensus 66 ~i~~v--IDATHPfA~~----is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 66 GIDAV--IDATHPFAAE----ISQNAIEACRELGIPYL 97 (249)
T ss_pred CCcEE--EECCCchHHH----HHHHHHHHHhhcCcceE
Confidence 66643 3455665444 34556778888887755
No 450
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=40.85 E-value=1.2e+02 Score=27.96 Aligned_cols=84 Identities=13% Similarity=0.183 Sum_probs=44.2
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 108 DPNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 108 ~~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
....++||.|+ ...=..+...|++.|.+|++..-. ......+....+.++..+.+|- -|.+.+++.++...+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVDEEDLLVECDV-----ASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhccCceeEEeCCC-----CCHHHHHHHHHHHHH
Confidence 34456777766 344455556778889888775322 1111122222133444555542 256677776665544
Q ss_pred cCCceEEEEEeCC
Q 037587 186 LNLKVKGVLITNP 198 (464)
Q Consensus 186 ~~~~~~~vil~~P 198 (464)
...+++. +++|.
T Consensus 80 ~~g~iD~-lv~nA 91 (252)
T PRK06079 80 RVGKIDG-IVHAI 91 (252)
T ss_pred HhCCCCE-EEEcc
Confidence 4346664 44444
No 451
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=40.81 E-value=2.2e+02 Score=27.85 Aligned_cols=108 Identities=8% Similarity=0.039 Sum_probs=59.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeE--EEcCCCCCC------hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAF--LLPTPYYPG------FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~V--lv~~p~y~~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
.+-|+..+|+-....++..+.-.-|..+ +..++.|.. ....+..+ |++...+.. +.+.+....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~l-gvd~~~i~~--------d~~~~~~l~ 130 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKL-GFDLHTITI--------NPETFRKLQ 130 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHc-CCCeEEEeC--------CHHHHHHHH
Confidence 5668888998777766533321224433 344566642 22223335 887777664 345554444
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
... . .+..+|...+. ......+.++|.++|+.+|+..-..+..|+
T Consensus 131 ~~~------~-----~~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~dE~fg 175 (343)
T TIGR03573 131 RAY------F-----KKVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENIAEEYG 175 (343)
T ss_pred HHH------H-----hccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCHHHhcC
Confidence 331 1 13334444332 234567788899999999887655554443
No 452
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=40.24 E-value=3.5e+02 Score=26.04 Aligned_cols=89 Identities=13% Similarity=0.157 Sum_probs=51.4
Q ss_pred EEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 112 LVLTAG---STAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 112 i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
|+++.| ..+++.++-.+- +-| |.|++..|.|.... .+.+.+..+......
T Consensus 80 vi~Gv~~~~t~~ai~~a~~A~-~~Gad~vlv~~P~y~~~~-------------------------~~~l~~yf~~va~a~ 133 (309)
T cd00952 80 VFVGATTLNTRDTIARTRALL-DLGADGTMLGRPMWLPLD-------------------------VDTAVQFYRDVAEAV 133 (309)
T ss_pred EEEEeccCCHHHHHHHHHHHH-HhCCCEEEECCCcCCCCC-------------------------HHHHHHHHHHHHHhC
Confidence 555544 456666664443 445 89999999764221 122222222221112
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
++..++++++| ..||..++.+.+++|++ -.++.-|=|..
T Consensus 134 ~~lPv~iYn~P-~~tg~~l~~~~l~~L~~---~pnivgiKdss 172 (309)
T cd00952 134 PEMAIAIYANP-EAFKFDFPRAAWAELAQ---IPQVVAAKYLG 172 (309)
T ss_pred CCCcEEEEcCc-hhcCCCCCHHHHHHHhc---CCCEEEEEecC
Confidence 13566777777 55899999998888753 23677676654
No 453
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=40.16 E-value=1.3e+02 Score=26.26 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=45.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
-++|.|++..=.....-|.+.|..|++.+.--+.-...++.. |-+++..|.+-. .-+++..++......-.+.+
T Consensus 12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-g~~~vf~padvt-----sekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-GGKVVFTPADVT-----SEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-CCceEEeccccC-----cHHHHHHHHHHHHhhcccee
Confidence 356777776666666668888866555544333345667777 888888886521 23555666554433334555
Q ss_pred EEE
Q 037587 192 GVL 194 (464)
Q Consensus 192 ~vi 194 (464)
+.+
T Consensus 86 ~~v 88 (260)
T KOG1199|consen 86 ALV 88 (260)
T ss_pred eee
Confidence 444
No 454
>PRK08862 short chain dehydrogenase; Provisional
Probab=40.13 E-value=2.2e+02 Score=25.76 Aligned_cols=83 Identities=8% Similarity=0.106 Sum_probs=46.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...+++|.|+...=..+...|.+.|..|++..-.-...... +... +.++..+.+|- -+.+.+++.+++..+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-TDNVYSFQLKD-----FSQESIRHLFDAIEQ 78 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCCeEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566776666555566667888998888765433222111 2223 55666666652 256777776665543
Q ss_pred cCC-ceEEEEEeCC
Q 037587 186 LNL-KVKGVLITNP 198 (464)
Q Consensus 186 ~~~-~~~~vil~~P 198 (464)
.-. +++. +++|.
T Consensus 79 ~~g~~iD~-li~na 91 (227)
T PRK08862 79 QFNRAPDV-LVNNW 91 (227)
T ss_pred HhCCCCCE-EEECC
Confidence 323 5664 44444
No 455
>PRK06484 short chain dehydrogenase; Validated
Probab=39.74 E-value=1.9e+02 Score=29.92 Aligned_cols=82 Identities=9% Similarity=0.101 Sum_probs=45.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|++..=..+...|.+.|..|++..-.-.......... +.++..+.+|- -|.+.+++.++...+...+
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDV-----SDEAQIREGFEQLHREFGR 79 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecc-----CCHHHHHHHHHHHHHHhCC
Confidence 34666666665555666678888987776543222222333333 55555565542 1567777777665444446
Q ss_pred eEEEEEeCC
Q 037587 190 VKGVLITNP 198 (464)
Q Consensus 190 ~~~vil~~P 198 (464)
++.+ ++|.
T Consensus 80 iD~l-i~na 87 (520)
T PRK06484 80 IDVL-VNNA 87 (520)
T ss_pred CCEE-EECC
Confidence 6644 4444
No 456
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=39.26 E-value=1.1e+02 Score=25.72 Aligned_cols=56 Identities=20% Similarity=0.144 Sum_probs=40.4
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHH-HHHHHHHHHhh-CCeEE-EEeccc
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQ-ELNHLINFSKS-KRIHI-VSDEIY 231 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~-~l~~i~~~~~~-~~~~l-I~Deay 231 (464)
.+.+.+.+.+++. ++..|++-.|.|..|...+.. ..+++++..++ .++.+ +.||-.
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERl 98 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERL 98 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 4788899888875 788899999999999887744 36666666554 35544 466644
No 457
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=39.19 E-value=2.8e+02 Score=25.24 Aligned_cols=103 Identities=14% Similarity=0.114 Sum_probs=52.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|++..=..+...|++.|..|++..-.-...... .... +.++..++.|- -|.+.+++.+....
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 81 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-GIKAHAAPFNV-----THKQEVEAAIEHIE 81 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEecCC-----CCHHHHHHHHHHHH
Confidence 344577777766666666677888888877654221111111 1122 44555666553 24567776666544
Q ss_pred hcCCceEEEEEeCCCCCCC--CCCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPSNPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG--~~~s~~~l~~i~~ 216 (464)
....+++.++.+-...+.+ ...+.+++++..+
T Consensus 82 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 115 (254)
T PRK08085 82 KDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIA 115 (254)
T ss_pred HhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4444566555432211111 1234555555544
No 458
>PRK02308 uvsE putative UV damage endonuclease; Provisional
Probab=39.06 E-value=3.4e+02 Score=26.12 Aligned_cols=53 Identities=17% Similarity=0.156 Sum_probs=27.4
Q ss_pred HHHHHHhCCCeeecCCccEEEEEecCcc--cc-cCChhHHHHHHHHHHHhcCeEEe
Q 037587 341 LVSGLKVAGIRCLKSNAGLFCWVDMRHL--LV-SNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 341 l~~~l~~~g~~~~~~~~g~f~~~~l~~~--~~-~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
+.+...++++.++.-.+.++=+..-|.. +. ......+.+.+..+++++|+.+.
T Consensus 53 ~l~~~~~~~I~~~R~sS~l~P~~~h~~~~~w~~~~~~~~~~~~~g~~~~~~~irls 108 (303)
T PRK02308 53 ILKYNIAHGIGLFRLSSSLIPLATHPELEGWDYIEPFKEELREIGEFIKEHNIRLS 108 (303)
T ss_pred HHHHHHHCCCCEEEcccCcCCCCCChhhcccCCCCCCHHHHHHHHHHHHHcCCCee
Confidence 3444456688877655554333332311 11 11223445566777778888553
No 459
>PRK06114 short chain dehydrogenase; Provisional
Probab=39.01 E-value=3e+02 Score=25.05 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=45.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-Chhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-GFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+....+++|.|+...=..+...|.+.|..|++....-. .... .+... +.++..++.|- -|.+.+++.+.+
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~i~~~~~~ 79 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-GRRAIQIAADV-----TSKADLRAAVAR 79 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHH
Confidence 34445777766666556666678888888776643211 1111 12222 44555566542 245667776665
Q ss_pred HhhcCCceEEEEE
Q 037587 183 AQTLNLKVKGVLI 195 (464)
Q Consensus 183 ~~~~~~~~~~vil 195 (464)
......+++.+|.
T Consensus 80 ~~~~~g~id~li~ 92 (254)
T PRK06114 80 TEAELGALTLAVN 92 (254)
T ss_pred HHHHcCCCCEEEE
Confidence 5444445665443
No 460
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.85 E-value=66 Score=31.28 Aligned_cols=73 Identities=21% Similarity=0.275 Sum_probs=48.2
Q ss_pred CCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 142 YYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 142 ~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
.|++|.+.++-. .++++++++...- ..+-+--++. +-|.|++--| . +++.++.++|++.|+++
T Consensus 60 ~y~syEeLakd~-~vDvVyi~~~~~q----H~evv~l~l~-------~~K~VL~EKP---l--a~n~~e~~~iveaA~~r 122 (351)
T KOG2741|consen 60 AYGSYEELAKDP-EVDVVYISTPNPQ----HYEVVMLALN-------KGKHVLCEKP---L--AMNVAEAEEIVEAAEAR 122 (351)
T ss_pred cccCHHHHhcCC-CcCEEEeCCCCcc----HHHHHHHHHH-------cCCcEEeccc---c--cCCHHHHHHHHHHHHHc
Confidence 488888888765 8888888864211 1222222222 3344666644 4 46779999999999998
Q ss_pred CeEEEEecccc
Q 037587 222 RIHIVSDEIYS 232 (464)
Q Consensus 222 ~~~lI~Deay~ 232 (464)
| +++.|..|.
T Consensus 123 g-v~~meg~~~ 132 (351)
T KOG2741|consen 123 G-VFFMEGLWW 132 (351)
T ss_pred C-cEEEeeeee
Confidence 8 566677665
No 461
>PRK08278 short chain dehydrogenase; Provisional
Probab=38.46 E-value=3.3e+02 Score=25.28 Aligned_cols=81 Identities=11% Similarity=0.097 Sum_probs=44.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-------hh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-------FD---RDLKWRPGVEIVPIHCSSSNGFRITISALENA 179 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-------~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 179 (464)
..+++|.|+...=..+...|.+.|..|++....... .. ..+... +.++..+..|- -+.+.+.+.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~-----~~~~~i~~~ 80 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDV-----RDEDQVAAA 80 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHH
Confidence 457777766655556666777888887765543321 11 111223 55566666552 246777776
Q ss_pred HHHHhhcCCceEEEEEe
Q 037587 180 YQQAQTLNLKVKGVLIT 196 (464)
Q Consensus 180 i~~~~~~~~~~~~vil~ 196 (464)
+.+....-.+++.+|.+
T Consensus 81 ~~~~~~~~g~id~li~~ 97 (273)
T PRK08278 81 VAKAVERFGGIDICVNN 97 (273)
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 66543333466755543
No 462
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=38.13 E-value=3.7e+02 Score=25.77 Aligned_cols=105 Identities=18% Similarity=0.226 Sum_probs=60.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--eEEEcC--CCCCChhhh--cccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGD--AFLLPT--PYYPGFDRD--LKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
+...+|++|.|.+.-+...+....++|. .|+|.+ |.+.++..+ .... |++..-++ | .++-..+
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~-giettVI~---------d-aaVfA~M 228 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQA-GIETTVIP---------D-AAVFAMM 228 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHc-CCeeEEec---------c-HHHHHHh
Confidence 3466899999998888888777766664 355543 333332222 1223 77766655 2 3344444
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
.+ -.|.|+-+..--+-|-+..+.-...++..|++|-+.+|+=
T Consensus 229 sr------VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~Vl 270 (353)
T KOG1465|consen 229 SR------VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVL 270 (353)
T ss_pred hh------cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEe
Confidence 43 2244444444344444555555556777778888877754
No 463
>PRK06398 aldose dehydrogenase; Validated
Probab=38.11 E-value=3.2e+02 Score=25.05 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=49.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-. . ..++..+.+|- -|.+.+++++++.....
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~------~---~~~~~~~~~D~-----~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP------S---YNDVDYFKVDV-----SNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc------c---cCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 3346777777766666666778888888876542211 1 11334444442 24567777666654444
Q ss_pred CceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
.+++.++ +|.. .+.+. ..+.++++++.+
T Consensus 71 ~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (258)
T PRK06398 71 GRIDILV-NNAGIESYGAIHAVEEDEWDRIIN 101 (258)
T ss_pred CCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 4667544 4332 22221 234555555544
No 464
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=37.96 E-value=2.8e+02 Score=25.80 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=56.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChhhhcccCCCcEEEEEecCCCCCccc-CHHHHHHHHHHHhhcC
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPGFDRDLKWRPGVEIVPIHCSSSNGFRI-TISALENAYQQAQTLN 187 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~~~~~~g~~~~~v~~~~~~~~~~-d~~~l~~~i~~~~~~~ 187 (464)
..|++-.|++++-.++- .|.+.|..|++..-+ |.. .... +.++.. + .+ +.+.|++.+.+.
T Consensus 3 ~~IlvlgGT~egr~la~-~L~~~g~~v~~Svat~~g~----~~~~-~~~v~~------G--~l~~~~~l~~~l~~~---- 64 (248)
T PRK08057 3 PRILLLGGTSEARALAR-ALAAAGVDIVLSLAGRTGG----PADL-PGPVRV------G--GFGGAEGLAAYLREE---- 64 (248)
T ss_pred ceEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCCC----cccC-CceEEE------C--CCCCHHHHHHHHHHC----
Confidence 35899999999998874 444567666655443 443 2222 433332 2 25 789999999763
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++++| .+...|.-.. --+.+.+.|++.|+..+
T Consensus 65 -~i~~V--IDATHPfA~~----is~~a~~ac~~~~ipyi 96 (248)
T PRK08057 65 -GIDLV--IDATHPYAAQ----ISANAAAACRALGIPYL 96 (248)
T ss_pred -CCCEE--EECCCccHHH----HHHHHHHHHHHhCCcEE
Confidence 66643 3455564443 34556778888887655
No 465
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=37.81 E-value=1.3e+02 Score=27.70 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=42.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|.+|++..-.-.......... +.++..+..|- -|.+.+.+.+++..+...
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH-GDAVVGVEGDV-----RSLDDHKEAVARCVAAFG 78 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCceEEEEecc-----CCHHHHHHHHHHHHHHhC
Confidence 445677766655555566678888988877543221111111122 44455555442 245566666655433334
Q ss_pred ceEEEEEeCC
Q 037587 189 KVKGVLITNP 198 (464)
Q Consensus 189 ~~~~vil~~P 198 (464)
+++. ++.|.
T Consensus 79 ~id~-li~~A 87 (262)
T TIGR03325 79 KIDC-LIPNA 87 (262)
T ss_pred CCCE-EEECC
Confidence 5664 44444
No 466
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.79 E-value=1.9e+02 Score=28.89 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=60.1
Q ss_pred EEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcc-cCHHHHHHHHHHHhhcCC
Q 037587 112 LVLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFR-ITISALENAYQQAQTLNL 188 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~-~d~~~l~~~i~~~~~~~~ 188 (464)
++-..|-.++=..+...+-..+ +.-++..++.+..... +.+ .+-++..++. +..|. .+.+.|.+.+++. -+
T Consensus 69 l~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~-Rv~s~nQQllRvD~--Ee~~~~~~~~~ll~~~~~~---l~ 142 (467)
T COG2870 69 LVGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKL-RVLSRNQQLLRLDF--EEKFPIEDENKLLEKIKNA---LK 142 (467)
T ss_pred EEEeeccchhHHHHHHHHHhcCcccceEeecCCCceeee-eeecccceEEEecc--cccCcchhHHHHHHHHHHH---hh
Confidence 4445676666666655553322 4445556655533211 111 1334555543 33333 2344444444432 23
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.++++++.-+ -|... ..+.++++|++.|+++++|-
T Consensus 143 ~~~~vVLSDY~--KG~L~---~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 143 SFDALVLSDYA--KGVLT---NVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred cCCEEEEeccc--cccch---hHHHHHHHHHHcCCcEEECC
Confidence 67888887542 35443 28899999999999999993
No 467
>PRK08643 acetoin reductase; Validated
Probab=37.70 E-value=3.2e+02 Score=24.87 Aligned_cols=99 Identities=11% Similarity=0.071 Sum_probs=49.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
++||.|++..=..+...|++.|..|++..-.-...... +... +.++..+..|- -+.+.+++.+.+..+..+
T Consensus 5 ~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-GGKAIAVKADV-----SDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 56665555555555666777887776654221111111 1222 44565666542 256777777766544445
Q ss_pred ceEEEEEeCCCCCCCC--CCCHHHHHHHHH
Q 037587 189 KVKGVLITNPSNPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~--~~s~~~l~~i~~ 216 (464)
+++.+|.+....+.+. ..+.+++++..+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 108 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYN 108 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6776655432222221 233455554443
No 468
>PRK07109 short chain dehydrogenase; Provisional
Probab=37.66 E-value=2.9e+02 Score=26.75 Aligned_cols=84 Identities=15% Similarity=0.187 Sum_probs=45.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|++..=..+...|.+.|..|++..-.-.... ..+... |.++..+..|- -|.+.+++.++...
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-g~~~~~v~~Dv-----~d~~~v~~~~~~~~ 80 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-GGEALAVVADV-----ADAEAVQAAADRAE 80 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHHHH
Confidence 3445677766555555566677788887776543221111 112223 66666666653 25677777766554
Q ss_pred hcCCceEEEEEeCC
Q 037587 185 TLNLKVKGVLITNP 198 (464)
Q Consensus 185 ~~~~~~~~vil~~P 198 (464)
..-.+++.+ +.|.
T Consensus 81 ~~~g~iD~l-InnA 93 (334)
T PRK07109 81 EELGPIDTW-VNNA 93 (334)
T ss_pred HHCCCCCEE-EECC
Confidence 433456644 4443
No 469
>PRK08263 short chain dehydrogenase; Provisional
Probab=37.56 E-value=2.6e+02 Score=25.90 Aligned_cols=100 Identities=14% Similarity=0.082 Sum_probs=47.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.+++|.|+...=..+...|.+.|..|++..-.-.......... +..+..+..|- -|.+.+.+.+........++
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~~ 78 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDV-----TDRAAVFAAVETAVEHFGRL 78 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4667666555555555667778877766542221111111222 33344445442 24566666665543333456
Q ss_pred EEEEEeCCCCCCCC--CCCHHHHHHHHH
Q 037587 191 KGVLITNPSNPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 191 ~~vil~~P~NPtG~--~~s~~~l~~i~~ 216 (464)
++++.+--....+. ..+.+++++..+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~ 106 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQID 106 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHH
Confidence 65554422222221 234455555444
No 470
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=37.52 E-value=2.6e+02 Score=25.30 Aligned_cols=81 Identities=9% Similarity=0.140 Sum_probs=43.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..+++|.|+...=..+...|++.|..|++. ...=.... ...+.. +.++..+..|- -|.+.+.+.+++..+
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-GRKALAVKANV-----GDVEKIKEMFAQIDE 78 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 356777766655556666778888776652 11101011 112223 55666666553 256777777766544
Q ss_pred cCCceEEEEEe
Q 037587 186 LNLKVKGVLIT 196 (464)
Q Consensus 186 ~~~~~~~vil~ 196 (464)
...+++.++.+
T Consensus 79 ~~~~id~vi~~ 89 (250)
T PRK08063 79 EFGRLDVFVNN 89 (250)
T ss_pred HcCCCCEEEEC
Confidence 43456655544
No 471
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=37.46 E-value=2e+02 Score=26.81 Aligned_cols=18 Identities=22% Similarity=0.320 Sum_probs=14.3
Q ss_pred CCCcEEEeCChHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETL 125 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~ 125 (464)
...+|++|.|+.+.-...
T Consensus 129 ~~~~iflttGsk~L~~f~ 146 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFV 146 (249)
T ss_pred CCCCEEEeCchhhHHHHh
Confidence 447899999998877664
No 472
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=37.32 E-value=2.8e+02 Score=25.30 Aligned_cols=81 Identities=10% Similarity=0.006 Sum_probs=43.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---cCCC-cEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---WRPG-VEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++............. ...+ .++..+..|-. +.+.+.+.+.+....
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~i~~~~~~~~~~ 78 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-----SEQSVLALSRGVDEI 78 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 47777776665566667777888777666544332222211 1112 34555655421 456666666655444
Q ss_pred CCceEEEEEe
Q 037587 187 NLKVKGVLIT 196 (464)
Q Consensus 187 ~~~~~~vil~ 196 (464)
..+++.++.+
T Consensus 79 ~~~id~vv~~ 88 (259)
T PRK12384 79 FGRVDLLVYN 88 (259)
T ss_pred cCCCCEEEEC
Confidence 3466655544
No 473
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=37.27 E-value=1e+02 Score=29.30 Aligned_cols=42 Identities=5% Similarity=0.174 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++.++++.+. .++.+++.... ++..+-+++.++|+++|+.++
T Consensus 77 ~~~l~e~~~~------Gvk~avIis~G------f~e~~~~~l~~~a~~~giril 118 (286)
T TIGR01019 77 ADAIFEAIDA------GIELIVCITEG------IPVHDMLKVKRYMEESGTRLI 118 (286)
T ss_pred HHHHHHHHHC------CCCEEEEECCC------CCHHHHHHHHHHHHHcCCEEE
Confidence 4555555443 66667665443 233345789999999998877
No 474
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=37.15 E-value=2.8e+02 Score=25.89 Aligned_cols=95 Identities=16% Similarity=0.265 Sum_probs=48.6
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc-e
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK-V 190 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~-~ 190 (464)
|++|.++...=..++..|.+.|..|.+..=.-.. .... +++++..++ -|.+.+.++++.... -.. +
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~----~~~~-~~~~~~~d~-------~d~~~l~~a~~~~~~-~~g~~ 68 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS----SAGP-NEKHVKFDW-------LDEDTWDNPFSSDDG-MEPEI 68 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc----ccCC-CCccccccC-------CCHHHHHHHHhcccC-cCCce
Confidence 5555553333334445666777655443211111 1112 544443332 367888877742100 013 6
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
..++++.|..+ . ..+....+++.|++.|+
T Consensus 69 d~v~~~~~~~~-~---~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 69 SAVYLVAPPIP-D---LAPPMIKFIDFARSKGV 97 (285)
T ss_pred eEEEEeCCCCC-C---hhHHHHHHHHHHHHcCC
Confidence 77777766432 1 12456788888888875
No 475
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=36.95 E-value=2.1e+02 Score=26.11 Aligned_cols=99 Identities=13% Similarity=0.233 Sum_probs=59.1
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEE----cCC--CC--C--C---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHH
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLL----PTP--YY--P--G---FDRDLKWRPGVEIVPIHCSSSNGFRITISALEN 178 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv----~~p--~y--~--~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 178 (464)
++.-+|+-.....+..+... -+.+.+ +.. .| + + ....+..+ |++++.++.... ..--.+.|.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~al-gipl~~~~~~~~--~e~~~e~l~~ 79 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESI-GIPLIKLYTEGT--EEDEVEELKG 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHc-CCCeEEeecCCC--ccHHHHHHHH
Confidence 45678888888888777655 443222 111 11 1 0 11223444 888877665421 1123466666
Q ss_pred HHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 179 AYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++++. ++.+|+ +|.+.+...+..+-+.|.+.|+..+
T Consensus 80 ~l~~~-----gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 80 ILHTL-----DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHc-----CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 66542 344444 7889999999999999999887654
No 476
>PRK06057 short chain dehydrogenase; Provisional
Probab=36.84 E-value=3.3e+02 Score=24.81 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=41.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+...++||.|+...=..+...+.+.|..|++..-.-.......... +...+..++. +.+.+++.++......
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~D~~-------~~~~~~~~~~~~~~~~ 77 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-GGLFVPTDVT-------DEDAVNALFDTAAETY 77 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-CCcEEEeeCC-------CHHHHHHHHHHHHHHc
Confidence 4456777766665555566667778887766532211111111222 3333333332 4566666666544333
Q ss_pred CceEEEEEe
Q 037587 188 LKVKGVLIT 196 (464)
Q Consensus 188 ~~~~~vil~ 196 (464)
++++.++.+
T Consensus 78 ~~id~vi~~ 86 (255)
T PRK06057 78 GSVDIAFNN 86 (255)
T ss_pred CCCCEEEEC
Confidence 466765543
No 477
>PRK07856 short chain dehydrogenase; Provisional
Probab=36.24 E-value=3.3e+02 Score=24.71 Aligned_cols=77 Identities=6% Similarity=0.015 Sum_probs=41.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. ... +.++..+..|- -+.+.+++.+....+..+
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVD-GRPAEFHAADV-----RDPDQVAALVDAIVERHG 74 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhc-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 3456666666555555666777788777765432211 112 44444455442 245667666665544444
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
+++.+|.+
T Consensus 75 ~id~vi~~ 82 (252)
T PRK07856 75 RLDVLVNN 82 (252)
T ss_pred CCCEEEEC
Confidence 66755543
No 478
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=36.21 E-value=2e+02 Score=27.32 Aligned_cols=57 Identities=7% Similarity=0.056 Sum_probs=39.1
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
+..+|.+.+++.++..... .++.++++ -++--+..+|.+|++++++.+.+. ++.||+
T Consensus 15 dg~iD~~~l~~l~~~l~~~--Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSY--GAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4578999999888776543 45555543 445566788999999999876653 355553
No 479
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=36.15 E-value=3.5e+02 Score=24.98 Aligned_cols=82 Identities=17% Similarity=0.096 Sum_probs=43.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....+++|.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -+.+.+.+.++...
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 82 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-GGEALAVKADV-----LDKESLEQARQQIL 82 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 344566766665555666677778888877765432211111 1222 45666666553 24566666655443
Q ss_pred hcCCceEEEEE
Q 037587 185 TLNLKVKGVLI 195 (464)
Q Consensus 185 ~~~~~~~~vil 195 (464)
....+++.+|.
T Consensus 83 ~~~g~id~li~ 93 (278)
T PRK08277 83 EDFGPCDILIN 93 (278)
T ss_pred HHcCCCCEEEE
Confidence 33346665444
No 480
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=36.10 E-value=39 Score=33.19 Aligned_cols=57 Identities=9% Similarity=0.320 Sum_probs=38.2
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+..+..+.+..+.+|.+.+..+.+.-.. . ....|..|+.+++++|++.|+++|+-||
T Consensus 31 KlN~lh~HltDd~~~rle~~~~P~Lt~~------g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 31 KLNVLHWHITDSQSFPLESPSYPELSKK------G---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred CCcEEEEeEEcCCCceEeeCCCchhhhc------c---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 6666666665555666665554443110 0 0123567999999999999999998877
No 481
>PRK06128 oxidoreductase; Provisional
Probab=36.02 E-value=3.8e+02 Score=25.29 Aligned_cols=102 Identities=9% Similarity=0.042 Sum_probs=53.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC--C---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP--G---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~--~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
...++||.|+...=..+...|++.|..|++....-. . ....+... |.++..++.|- -+.+.+++.+.+.
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~ 128 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDL-----KDEAFCRQLVERA 128 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCC-----CCHHHHHHHHHHH
Confidence 345777777666666666778888988776421111 0 11112223 55666666553 2567777776654
Q ss_pred hhcCCceEEEEEeCCCC--CCC--CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPSN--PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~N--PtG--~~~s~~~l~~i~~~ 217 (464)
.+...+++.+| .|... +.+ .-++.+++++..+.
T Consensus 129 ~~~~g~iD~lV-~nAg~~~~~~~~~~~~~~~~~~~~~~ 165 (300)
T PRK06128 129 VKELGGLDILV-NIAGKQTAVKDIADITTEQFDATFKT 165 (300)
T ss_pred HHHhCCCCEEE-ECCcccCCCCChhhCCHHHHHHHHHH
Confidence 44334666544 44421 111 12355666666553
No 482
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=35.70 E-value=1.5e+02 Score=27.93 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=36.1
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
+..+|.+.+++.++..... .++.+++ +-++--+..++.+|++++++.+.+.
T Consensus 12 dg~iD~~~~~~~i~~l~~~--Gv~gi~~-~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 12 DGEVDLDALRRLVEFLIEA--GVDGLVV-LGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEE-CCCCcccccCCHHHHHHHHHHHHHH
Confidence 4578999998888776544 4555544 3455566788999999998877653
No 483
>PRK08267 short chain dehydrogenase; Provisional
Probab=35.65 E-value=3.1e+02 Score=25.04 Aligned_cols=80 Identities=8% Similarity=-0.065 Sum_probs=40.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc-CCce
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL-NLKV 190 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~~ 190 (464)
++||.|+...=..+...+++.|..|++....=...........+.++..+..|- -+.+.+.+.+...... ..++
T Consensus 4 vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 4 IFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDV-----TDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 566666554444555667788887776653322122222222133444444442 2456677666654332 3456
Q ss_pred EEEEEe
Q 037587 191 KGVLIT 196 (464)
Q Consensus 191 ~~vil~ 196 (464)
++|+.+
T Consensus 79 d~vi~~ 84 (260)
T PRK08267 79 DVLFNN 84 (260)
T ss_pred CEEEEC
Confidence 655543
No 484
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=35.29 E-value=2.2e+02 Score=26.15 Aligned_cols=102 Identities=15% Similarity=0.097 Sum_probs=51.7
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhcCCCCeEEEcCCC-------CCC-------hhhhcccCCCcEEEEEecCCCCCccc
Q 037587 108 DPNKLVLTAGST--AANETLMFCLADPGDAFLLPTPY-------YPG-------FDRDLKWRPGVEIVPIHCSSSNGFRI 171 (464)
Q Consensus 108 ~~~~i~it~G~~--~al~~~~~~l~~~gd~Vlv~~p~-------y~~-------~~~~~~~~~g~~~~~v~~~~~~~~~~ 171 (464)
....++||.|+. ..=..+...|+..|..|++..-+ +.. ....+... |.++..++.|- -
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~D~-----~ 78 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-GVKVSSMELDL-----T 78 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-CCeEEEEEcCC-----C
Confidence 345677776652 22333445566788887764211 110 01112333 66777776652 2
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCCCC---CCCCCCHHHHHHHHH
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPSNP---LGTAMTHQELNHLIN 216 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~NP---tG~~~s~~~l~~i~~ 216 (464)
+.+.+++.+....+..++++. ++.|+... .-...+.+++++..+
T Consensus 79 ~~~~i~~~~~~~~~~~g~id~-li~~ag~~~~~~~~~~~~~~~~~~~~ 125 (256)
T PRK12859 79 QNDAPKELLNKVTEQLGYPHI-LVNNAAYSTNNDFSNLTAEELDKHYM 125 (256)
T ss_pred CHHHHHHHHHHHHHHcCCCcE-EEECCCCCCCCChhhCCHHHHHHHHH
Confidence 467777777665444345664 44444211 112345556655554
No 485
>PRK12743 oxidoreductase; Provisional
Probab=35.29 E-value=2.5e+02 Score=25.63 Aligned_cols=80 Identities=11% Similarity=0.058 Sum_probs=44.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPT-PYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|++..=..+...|++.|..|++.. ..-.... ...... |.++..+..|- -+.+.+++.+++..+.
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 77 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDL-----SDLPEGAQALDKLIQR 77 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 467777766666667777888898886642 2111111 112223 55555555542 2466776666655444
Q ss_pred CCceEEEEEe
Q 037587 187 NLKVKGVLIT 196 (464)
Q Consensus 187 ~~~~~~vil~ 196 (464)
..+++.++.+
T Consensus 78 ~~~id~li~~ 87 (256)
T PRK12743 78 LGRIDVLVNN 87 (256)
T ss_pred cCCCCEEEEC
Confidence 4466755544
No 486
>PRK07791 short chain dehydrogenase; Provisional
Probab=35.09 E-value=3.9e+02 Score=25.09 Aligned_cols=83 Identities=11% Similarity=0.021 Sum_probs=45.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC---------CChhhh---cccCCCcEEEEEecCCCCCcccCHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY---------PGFDRD---LKWRPGVEIVPIHCSSSNGFRITISAL 176 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y---------~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l 176 (464)
...++||.|++..=..+...|++.|..|++..-.. ...... +... |.++..+.+|- -|.+.+
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~v 79 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-GGEAVANGDDI-----ADWDGA 79 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-CCceEEEeCCC-----CCHHHH
Confidence 34567777766665666667888888877654222 111111 1222 45555665542 245677
Q ss_pred HHHHHHHhhcCCceEEEEEeCC
Q 037587 177 ENAYQQAQTLNLKVKGVLITNP 198 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P 198 (464)
.+.++...+...+++.+ ++|.
T Consensus 80 ~~~~~~~~~~~g~id~l-v~nA 100 (286)
T PRK07791 80 ANLVDAAVETFGGLDVL-VNNA 100 (286)
T ss_pred HHHHHHHHHhcCCCCEE-EECC
Confidence 77666654444466654 4444
No 487
>PRK08226 short chain dehydrogenase; Provisional
Probab=34.73 E-value=3.6e+02 Score=24.63 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=44.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|++.|..|++..-.-. .... .... +.++..+..|- -+.+.+++.+.....
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 78 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR-GHRCTAVVADV-----RDPASVAAAIKRAKE 78 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 445777777666666666778888887776643321 1111 1112 44555555542 245666666665544
Q ss_pred cCCceEEEEEe
Q 037587 186 LNLKVKGVLIT 196 (464)
Q Consensus 186 ~~~~~~~vil~ 196 (464)
.-.+++.++.+
T Consensus 79 ~~~~id~vi~~ 89 (263)
T PRK08226 79 KEGRIDILVNN 89 (263)
T ss_pred HcCCCCEEEEC
Confidence 44466765544
No 488
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=34.53 E-value=84 Score=25.69 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=43.3
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE--eCC---CCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI--TNP---SNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil--~~P---~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
+++++.+|.. ..+|+..+.+++++ ..+.|++ |.| |...|......+++.+-++..+.|+
T Consensus 28 ~vriIrvpC~----Grv~~~~il~Af~~------GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 28 NVRIIRVPCS----GRVDPEFILRAFEK------GADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CeEEEEccCC----CccCHHHHHHHHHc------CCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 5678888864 36899999999876 5666666 454 5689988887777777777776553
No 489
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=34.49 E-value=3.1e+02 Score=24.89 Aligned_cols=78 Identities=8% Similarity=0.021 Sum_probs=38.1
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
+++|.|+...=..+...|++.|..|++..-.-.......... +.++..+..|- -+.+.+.+.+........+++
T Consensus 3 vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~~id 76 (248)
T PRK10538 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDV-----RNRAAIEEMLASLPAEWRNID 76 (248)
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 556655444444445567778877776543211111212222 44455555442 245666666655433334566
Q ss_pred EEEE
Q 037587 192 GVLI 195 (464)
Q Consensus 192 ~vil 195 (464)
.++.
T Consensus 77 ~vi~ 80 (248)
T PRK10538 77 VLVN 80 (248)
T ss_pred EEEE
Confidence 5543
No 490
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=34.25 E-value=1.5e+02 Score=28.84 Aligned_cols=106 Identities=20% Similarity=0.221 Sum_probs=63.0
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcC-CCCCCh-h----hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPT-PYYPGF-D----RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~-~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
.|=|.-|.-+...|.+.|-+|++.. =||-.- . ...+.. |++++.-+.. .+.=.+-.++++.+..+ +
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~-gv~vI~~~~G-~DpAaVafDAi~~Akar------~ 221 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERL-GVPVISGKEG-ADPAAVAFDAIQAAKAR------G 221 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHh-CCeEEccCCC-CCcHHHHHHHHHHHHHc------C
Confidence 4567778888888888898777654 334210 1 112333 7777764311 11111223444444433 6
Q ss_pred eEEEEEeCC---CCCCCCCCCHHHHHHHHHHHhhCC------eEEEEecccc
Q 037587 190 VKGVLITNP---SNPLGTAMTHQELNHLINFSKSKR------IHIVSDEIYS 232 (464)
Q Consensus 190 ~~~vil~~P---~NPtG~~~s~~~l~~i~~~~~~~~------~~lI~Deay~ 232 (464)
.+.|++... ||-+... ++|++|.+.+.+.. ++++.|..-+
T Consensus 222 ~DvvliDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 222 IDVVLIDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred CCEEEEeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 777777665 7777765 89999999998754 6666686443
No 491
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=34.07 E-value=2.2e+02 Score=27.11 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=36.8
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
.+..+|.+.+++.++.....| .+..|++ +-++--+..++.+|++++++.+.+.
T Consensus 14 ~dg~iD~~~~~~~i~~~i~~G-~v~gi~~-~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 14 EDGTINEKGLRQIIRHNIDKM-KVDGLYV-GGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCcCHHHHHHHHHHHHhCC-CcCEEEE-CCcccccccCCHHHHHHHHHHHHHH
Confidence 345799999999887754432 1555444 3455566788999999999877653
No 492
>PRK06482 short chain dehydrogenase; Provisional
Probab=34.04 E-value=3e+02 Score=25.43 Aligned_cols=80 Identities=13% Similarity=0.051 Sum_probs=40.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|.+..-............ +.++..+..|- -|.+.+.+.+.+..+...++
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 77 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDV-----TDSAAVRAVVDRAFAALGRI 77 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 3677766655555556677788888776543322111111112 23344444432 14566666665543333456
Q ss_pred EEEEEe
Q 037587 191 KGVLIT 196 (464)
Q Consensus 191 ~~vil~ 196 (464)
..||.+
T Consensus 78 d~vi~~ 83 (276)
T PRK06482 78 DVVVSN 83 (276)
T ss_pred CEEEEC
Confidence 655544
No 493
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=33.88 E-value=1.5e+02 Score=27.38 Aligned_cols=84 Identities=11% Similarity=0.065 Sum_probs=43.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|++..=..+...|.+.|..|++..-.-.......... +.++..++.|- -+.+.+++.+++..+..
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDV-----TSYADNQRAVDQTVDAF 78 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHhc
Confidence 3345667666655555566677788877776543222122222222 33344444442 24566666666544444
Q ss_pred CceEEEEEeCC
Q 037587 188 LKVKGVLITNP 198 (464)
Q Consensus 188 ~~~~~vil~~P 198 (464)
.+++.+ +.|.
T Consensus 79 g~id~l-i~~a 88 (263)
T PRK06200 79 GKLDCF-VGNA 88 (263)
T ss_pred CCCCEE-EECC
Confidence 466644 4444
No 494
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=33.82 E-value=2e+02 Score=27.21 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=36.0
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .++.++++ -++--+..+|.+|++++++.+.++ ++.+|.
T Consensus 15 ~dg~id~~~~~~~i~~l~~~--Gv~gl~~~-GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 15 ADGSIDEDALKRLIDFLIEA--GVDGLVVL-GSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp TTSSB-HHHHHHHHHHHHHT--TSSEEEES-STTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCcCHHHHHHHHHHHHHc--CCCEEEEC-CCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 34578888888888765544 34555543 334556778888888888887652 444543
No 495
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=33.76 E-value=1e+02 Score=26.88 Aligned_cols=112 Identities=13% Similarity=0.155 Sum_probs=61.4
Q ss_pred CC-hHHHHHHHHHHhcCCCCeEEEcCCCCCChhh--hcccCCCcEEEEE--ecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 116 AG-STAANETLMFCLADPGDAFLLPTPYYPGFDR--DLKWRPGVEIVPI--HCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 116 ~G-~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--~~~~~~g~~~~~v--~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+| +++++..+ ..+...|.+|++..|....-.. .+....|.....+ +.+ ++..+.+.+. .++
T Consensus 12 sGKS~eLi~~~-~~~~~~~~~v~~~kp~~D~R~~~~~I~s~~g~~~~~~~~~~~-------~~~~~~~~~~------~~~ 77 (176)
T PF00265_consen 12 SGKSTELIRRI-HRYEIAGKKVLVFKPAIDTRYGEDKIVSHDGISLEAIVDPID-------NLFEIIDILE------NDY 77 (176)
T ss_dssp SSHHHHHHHHH-HHHHHTT-EEEEEEESTSCCCCSSEEEHTTSCEEEEESSEES-------SGGGGGGGCC------TTC
T ss_pred ChhHHHHHHHH-HHHHhCCCeEEEEEecccCcCCCCeEEecCCCcccccccchh-------hHHHHHHHhc------cCC
Confidence 56 44444444 4444578889988886542211 1222236666555 222 2233332222 147
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
..|++.-. +-++ +++.++++.+..+|+.|++=.--.+ |.+. +|.+...|++
T Consensus 78 dvI~IDEa-----QFf~-~~i~~l~~~~~~~g~~Vi~~GL~~d--f~~~--~F~~~~~Ll~ 128 (176)
T PF00265_consen 78 DVIGIDEA-----QFFD-EQIVQLVEILANKGIPVICAGLDTD--FRGE--PFGGSPRLLP 128 (176)
T ss_dssp SEEEESSG-----GGST-TTHHHHHHHHHHTT-EEEEEEESB---TTSS--B-TTHHHHHH
T ss_pred CEEEEech-----HhhH-HHHHHHHHHHHhCCCeEEEEeeCCc--cccC--cchhHHHHHh
Confidence 77777644 4466 6788899998889998886543333 5555 6667666665
No 496
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=33.76 E-value=2.7e+02 Score=25.20 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=44.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
++||.|+...=..+...|++.|-.|++..-.-.... ..+... +.++..+..|- -|.+.+.+.+.......+
T Consensus 3 ~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~i~~~~~~~~~~~~ 76 (254)
T TIGR02415 3 ALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDV-----SDKDQVFSAIDQAAEKFG 76 (254)
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 566666555555566667778877665542211111 112222 54555555542 256777776665544444
Q ss_pred ceEEEEEeCCCCCCC
Q 037587 189 KVKGVLITNPSNPLG 203 (464)
Q Consensus 189 ~~~~vil~~P~NPtG 203 (464)
+++.++.+....+.+
T Consensus 77 ~id~vi~~ag~~~~~ 91 (254)
T TIGR02415 77 GFDVMVNNAGVAPIT 91 (254)
T ss_pred CCCEEEECCCcCCCC
Confidence 667666554434433
No 497
>PRK05993 short chain dehydrogenase; Provisional
Probab=33.74 E-value=3.7e+02 Score=24.95 Aligned_cols=76 Identities=12% Similarity=0.120 Sum_probs=38.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc-CCc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL-NLK 189 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~-~~~ 189 (464)
.++||.|+...=..+...|.+.|..|++..-.-.... .+... ++.++..++. |.+.+++.++..... +.+
T Consensus 6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~~~-~~~~~~~Dl~-------d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALEAE-GLEAFQLDYA-------EPESIAALVAQVLELSGGR 76 (277)
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHC-CceEEEccCC-------CHHHHHHHHHHHHHHcCCC
Confidence 4666666554444555667788888777643322111 12223 5554444332 456666666554222 235
Q ss_pred eEEEEE
Q 037587 190 VKGVLI 195 (464)
Q Consensus 190 ~~~vil 195 (464)
++.++.
T Consensus 77 id~li~ 82 (277)
T PRK05993 77 LDALFN 82 (277)
T ss_pred ccEEEE
Confidence 665443
No 498
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=33.72 E-value=2.3e+02 Score=26.71 Aligned_cols=56 Identities=14% Similarity=0.172 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCCCCCHHHHHHHHHH---HhhCCeEEEEecccc
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPS-NPLGTAMTHQELNHLINF---SKSKRIHIVSDEIYS 232 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~~~s~~~l~~i~~~---~~~~~~~lI~Deay~ 232 (464)
+.+.+.+.++.... ..+.+.|++..|. ++. ..+.++++.++ +....+++++|....
T Consensus 138 ~~~~l~~~l~~l~~-~~~~D~ViIDt~Gr~~~----~~~~l~el~~~~~~~~~~~~~LVl~a~~~ 197 (270)
T PRK06731 138 DEAAMTRALTYFKE-EARVDYILIDTAGKNYR----ASETVEEMIETMGQVEPDYICLTLSASMK 197 (270)
T ss_pred CHHHHHHHHHHHHh-cCCCCEEEEECCCCCcC----CHHHHHHHHHHHhhhCCCeEEEEEcCccC
Confidence 45677776654422 1256778888773 332 23344544444 443456777776553
No 499
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=33.56 E-value=3.9e+02 Score=24.64 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=59.3
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
...+.++++...+......|.+|++....-.. ....+... |+++..++.-....-..+.+.+.+.+.. .+.+
T Consensus 104 p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~-G~~v~~~~~Y~~~~~~~~~~~~~~~~~~-----~~~d 177 (248)
T COG1587 104 PEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEER-GAEVREVEVYRTEPPPLDEATLIELLKL-----GEVD 177 (248)
T ss_pred CCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhC-CCEEEEEeeeeecCCCccHHHHHHHHHh-----CCCC
Confidence 34688888888888877668899988655433 44445555 8988887753211111233444444443 3778
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
+|+++++ ..++.+.+.+.+.+.
T Consensus 178 ~v~ftS~----------~~v~~~~~~~~~~~~ 199 (248)
T COG1587 178 AVVFTSS----------SAVRALLALAPESGI 199 (248)
T ss_pred EEEEeCH----------HHHHHHHHHccccch
Confidence 8888755 667888887766543
No 500
>PRK10595 SOS cell division inhibitor; Provisional
Probab=33.53 E-value=3.2e+02 Score=23.65 Aligned_cols=99 Identities=20% Similarity=0.161 Sum_probs=55.3
Q ss_pred cEEEe---CChHH-HHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcE---EEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 111 KLVLT---AGSTA-ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVE---IVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 111 ~i~it---~G~~~-al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+|+.. .|-.+ .+.=++..+...+.-|+.-.|-+..+....... |+. ++.+..... .-.+..+|++++.
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~-Gl~l~rvl~v~~~~~---~d~Lwa~EqaLrs- 104 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQAS-GLPLTKVMQLSQLSP---CHTVEAMERALRT- 104 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHc-CCCcccEEEEecCCc---HHHHHHHHHHHhh-
Confidence 56664 44445 333333334445666777777777777777666 775 444432211 1135667777765
Q ss_pred hhcCCceEEEEEeC-CCCCCCCCCCHHHHHHHHHHHhhCCeE
Q 037587 184 QTLNLKVKGVLITN-PSNPLGTAMTHQELNHLINFSKSKRIH 224 (464)
Q Consensus 184 ~~~~~~~~~vil~~-P~NPtG~~~s~~~l~~i~~~~~~~~~~ 224 (464)
+... .+++- |+ -++.++++++--.|++-+.+
T Consensus 105 ----G~~~-aVL~Wlp~-----~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 105 ----GNYS-VVLGWLPD-----ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred ----CCCc-EEEECCcc-----cCCHHHHHHHHHHHHhCCCE
Confidence 2334 45554 32 25667888887777766543
Done!