Query 037587
Match_columns 464
No_of_seqs 266 out of 2522
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 03:19:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3piu_A 1-aminocyclopropane-1-c 100.0 1.8E-57 6.2E-62 461.0 42.6 431 1-433 3-433 (435)
2 1iay_A ACC synthase 2, 1-amino 100.0 1.1E-54 3.7E-59 439.7 45.4 428 1-433 1-428 (428)
3 1b5p_A Protein (aspartate amin 100.0 3.2E-48 1.1E-52 386.8 32.0 350 36-430 31-383 (385)
4 3tcm_A Alanine aminotransferas 100.0 4.9E-47 1.7E-51 390.5 35.7 348 76-433 126-495 (500)
5 3k7y_A Aspartate aminotransfer 100.0 4.3E-47 1.5E-51 379.6 30.4 346 36-431 29-404 (405)
6 3jtx_A Aminotransferase; NP_28 100.0 3E-46 1E-50 373.6 35.5 353 33-429 27-395 (396)
7 3aow_A Putative uncharacterize 100.0 8.1E-46 2.8E-50 376.5 36.6 359 36-432 76-445 (448)
8 1gd9_A Aspartate aminotransfer 100.0 4.5E-46 1.6E-50 371.5 34.0 358 36-433 26-387 (389)
9 2x5d_A Probable aminotransfera 100.0 1.5E-46 5.2E-51 378.1 30.3 361 35-434 36-400 (412)
10 2o1b_A Aminotransferase, class 100.0 3.8E-46 1.3E-50 374.3 32.0 353 36-432 47-403 (404)
11 3b46_A Aminotransferase BNA3; 100.0 2.1E-46 7.1E-51 381.1 30.3 359 35-427 56-442 (447)
12 3e2y_A Kynurenine-oxoglutarate 100.0 3.2E-46 1.1E-50 375.2 31.2 359 35-427 22-408 (410)
13 3fvs_A Kynurenine--oxoglutarat 100.0 2.4E-46 8.3E-51 377.6 30.3 363 36-431 28-421 (422)
14 3dyd_A Tyrosine aminotransfera 100.0 1.1E-45 3.7E-50 373.7 32.9 360 35-433 53-425 (427)
15 3fdb_A Beta C-S lyase, putativ 100.0 1.3E-45 4.3E-50 366.5 31.8 350 34-432 21-376 (377)
16 3h14_A Aminotransferase, class 100.0 2E-45 6.7E-50 367.3 32.0 350 35-434 30-384 (391)
17 1yiz_A Kynurenine aminotransfe 100.0 2.1E-45 7.1E-50 371.7 32.0 364 36-431 37-428 (429)
18 3ihj_A Alanine aminotransferas 100.0 8.9E-45 3.1E-49 373.2 36.6 350 77-433 122-494 (498)
19 3dzz_A Putative pyridoxal 5'-p 100.0 4.7E-45 1.6E-49 364.1 33.0 359 34-433 25-390 (391)
20 3ezs_A Aminotransferase ASPB; 100.0 4E-45 1.4E-49 362.9 32.0 345 37-432 24-375 (376)
21 3kax_A Aminotransferase, class 100.0 5.2E-45 1.8E-49 362.8 32.1 353 35-429 23-382 (383)
22 3get_A Histidinol-phosphate am 100.0 7.7E-45 2.6E-49 359.5 33.0 332 36-429 30-364 (365)
23 3ele_A Amino transferase; RER0 100.0 7.5E-45 2.6E-49 363.9 33.1 348 35-433 34-397 (398)
24 1u08_A Hypothetical aminotrans 100.0 4.8E-45 1.7E-49 363.8 31.3 350 36-427 30-385 (386)
25 1c7n_A Cystalysin; transferase 100.0 5.2E-45 1.8E-49 365.1 31.1 358 35-433 30-394 (399)
26 2dou_A Probable N-succinyldiam 100.0 2.7E-45 9.2E-50 364.4 28.5 348 35-429 24-375 (376)
27 1j32_A Aspartate aminotransfer 100.0 8.9E-45 3E-49 362.1 32.0 355 35-432 29-387 (388)
28 3qgu_A LL-diaminopimelate amin 100.0 3.4E-45 1.2E-49 372.4 28.2 358 35-437 68-445 (449)
29 1o4s_A Aspartate aminotransfer 100.0 2.8E-44 9.6E-49 358.8 33.9 346 35-431 40-388 (389)
30 1bw0_A TAT, protein (tyrosine 100.0 2.8E-44 9.5E-49 361.9 34.1 366 34-433 31-414 (416)
31 3nra_A Aspartate aminotransfer 100.0 1.7E-44 5.6E-49 362.2 31.5 359 35-433 38-406 (407)
32 2o0r_A RV0858C (N-succinyldiam 100.0 8.8E-45 3E-49 365.1 29.5 357 36-433 25-397 (411)
33 1vp4_A Aminotransferase, putat 100.0 8.4E-44 2.9E-48 359.6 36.2 362 35-433 42-419 (425)
34 2r2n_A Kynurenine/alpha-aminoa 100.0 2.2E-44 7.4E-49 363.9 31.7 329 77-432 71-424 (425)
35 2x5f_A Aspartate_tyrosine_phen 100.0 2E-44 6.9E-49 364.6 30.7 355 36-432 47-429 (430)
36 1d2f_A MALY protein; aminotran 100.0 3.2E-44 1.1E-48 358.4 31.0 352 36-432 28-389 (390)
37 2zy4_A L-aspartate beta-decarb 100.0 1.2E-44 3.9E-49 375.4 28.3 355 38-433 106-523 (546)
38 1xi9_A Putative transaminase; 100.0 2.9E-44 1E-48 360.7 30.3 355 35-432 37-403 (406)
39 3ly1_A Putative histidinol-pho 100.0 1.7E-43 5.8E-48 348.3 35.0 339 33-432 13-352 (354)
40 3rq1_A Aminotransferase class 100.0 1.3E-43 4.5E-48 357.2 34.9 352 36-433 38-416 (418)
41 4dq6_A Putative pyridoxal phos 100.0 4.4E-44 1.5E-48 357.1 31.1 352 35-429 31-390 (391)
42 3g0t_A Putative aminotransfera 100.0 2E-44 6.9E-49 365.2 28.9 358 35-431 43-436 (437)
43 3l8a_A METC, putative aminotra 100.0 1.3E-43 4.5E-48 357.7 32.4 354 35-430 60-420 (421)
44 1fg7_A Histidinol phosphate am 100.0 1.2E-43 4.1E-48 350.1 30.5 330 26-427 17-353 (356)
45 3ffh_A Histidinol-phosphate am 100.0 3.9E-43 1.3E-47 347.0 33.8 329 36-428 32-362 (363)
46 3euc_A Histidinol-phosphate am 100.0 1.2E-42 4.1E-47 344.1 37.3 344 23-430 18-366 (367)
47 2z61_A Probable aspartate amin 100.0 2E-43 6.7E-48 350.1 31.5 338 35-430 28-369 (370)
48 1v2d_A Glutamine aminotransfer 100.0 1.2E-43 4E-48 353.2 28.9 342 36-434 25-373 (381)
49 3ei9_A LL-diaminopimelate amin 100.0 7.6E-44 2.6E-48 360.6 26.6 353 35-433 55-429 (432)
50 2zc0_A Alanine glyoxylate tran 100.0 2E-42 6.8E-47 347.3 35.7 359 37-432 35-404 (407)
51 3d6k_A Putative aminotransfera 100.0 1.5E-43 5.2E-48 357.3 27.4 354 37-432 33-418 (422)
52 3t18_A Aminotransferase class 100.0 8.7E-43 3E-47 350.7 32.8 348 36-432 37-410 (413)
53 4f4e_A Aromatic-amino-acid ami 100.0 2E-43 6.9E-48 356.2 27.8 346 36-429 49-419 (420)
54 2zyj_A Alpha-aminodipate amino 100.0 1.2E-42 4.1E-47 347.8 33.2 351 36-432 32-393 (397)
55 2gb3_A Aspartate aminotransfer 100.0 6.9E-43 2.4E-47 351.1 30.9 351 35-433 42-403 (409)
56 1lc5_A COBD, L-threonine-O-3-p 100.0 2E-42 7E-47 342.1 33.5 335 35-432 23-360 (364)
57 7aat_A Aspartate aminotransfer 100.0 1.6E-43 5.5E-48 354.6 25.5 347 36-429 28-400 (401)
58 3asa_A LL-diaminopimelate amin 100.0 2.8E-43 9.7E-48 352.9 25.8 350 35-432 32-393 (400)
59 3ppl_A Aspartate aminotransfer 100.0 1.3E-42 4.4E-47 351.1 28.7 325 76-433 70-421 (427)
60 3fsl_A Aromatic-amino-acid ami 100.0 8.9E-43 3E-47 348.6 26.5 346 35-428 25-396 (397)
61 3p1t_A Putative histidinol-pho 100.0 6.9E-42 2.4E-46 334.4 31.9 323 32-430 12-335 (337)
62 3ftb_A Histidinol-phosphate am 100.0 1.2E-41 4.2E-46 335.8 33.3 334 34-431 24-360 (361)
63 3f6t_A Aspartate aminotransfer 100.0 1.1E-42 3.8E-47 360.4 26.2 356 37-433 104-526 (533)
64 3fkd_A L-threonine-O-3-phospha 100.0 7.4E-42 2.5E-46 336.2 28.5 329 35-436 14-346 (350)
65 1ajs_A Aspartate aminotransfer 100.0 5.8E-42 2E-46 344.5 27.9 351 35-433 29-412 (412)
66 3ez1_A Aminotransferase MOCR f 100.0 7.2E-42 2.5E-46 345.1 27.1 355 36-433 25-416 (423)
67 2hox_A ALLIIN lyase 1; cystein 100.0 2.6E-43 8.9E-48 355.7 15.9 356 7-432 19-425 (427)
68 3b1d_A Betac-S lyase; HET: PLP 100.0 2.1E-45 7.3E-50 367.3 0.0 354 36-430 31-391 (392)
69 3g7q_A Valine-pyruvate aminotr 100.0 1.2E-41 4.2E-46 342.6 26.9 354 36-432 31-413 (417)
70 1yaa_A Aspartate aminotransfer 100.0 1.6E-41 5.5E-46 341.4 27.4 349 36-431 29-410 (412)
71 2q7w_A Aspartate aminotransfer 100.0 7.8E-42 2.7E-46 341.6 24.5 343 36-428 26-395 (396)
72 3if2_A Aminotransferase; YP_26 100.0 9.6E-41 3.3E-45 339.0 32.6 364 36-433 31-441 (444)
73 4eu1_A Mitochondrial aspartate 100.0 1.5E-41 5E-46 341.4 26.0 346 36-429 41-408 (409)
74 3meb_A Aspartate aminotransfer 100.0 6.6E-41 2.2E-45 340.6 30.7 351 36-433 49-445 (448)
75 3hdo_A Histidinol-phosphate am 100.0 1.9E-40 6.6E-45 327.5 32.3 346 20-433 7-356 (360)
76 3op7_A Aminotransferase class 100.0 3E-41 1E-45 335.0 25.7 314 77-433 56-372 (375)
77 3cq5_A Histidinol-phosphate am 100.0 9E-40 3.1E-44 323.8 35.6 334 38-431 32-367 (369)
78 4h51_A Aspartate aminotransfer 100.0 6.3E-41 2.2E-45 335.2 26.8 347 38-433 46-418 (420)
79 3bwn_A AT1G70560, L-tryptophan 100.0 1.3E-41 4.4E-46 339.7 20.8 335 33-432 19-387 (391)
80 2ay1_A Aroat, aromatic amino a 100.0 4.8E-41 1.6E-45 335.7 23.8 342 36-428 26-392 (394)
81 1uu1_A Histidinol-phosphate am 100.0 2.3E-39 7.8E-44 316.7 28.0 323 28-428 11-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 1.1E-35 3.8E-40 297.3 32.6 344 34-433 41-393 (398)
83 3tqx_A 2-amino-3-ketobutyrate 100.0 3.9E-34 1.3E-38 285.9 29.6 345 35-433 42-397 (399)
84 1fc4_A 2-amino-3-ketobutyrate 100.0 9.6E-34 3.3E-38 283.5 26.6 342 34-433 43-398 (401)
85 1vjo_A Alanine--glyoxylate ami 100.0 2.4E-33 8.1E-38 279.8 25.7 298 86-429 65-392 (393)
86 1bs0_A Protein (8-amino-7-oxon 100.0 4E-33 1.4E-37 277.4 26.4 336 35-428 38-383 (384)
87 1eg5_A Aminotransferase; PLP-d 100.0 2.8E-33 9.7E-38 277.9 24.2 339 39-433 3-377 (384)
88 2dr1_A PH1308 protein, 386AA l 100.0 7.1E-33 2.4E-37 275.3 26.6 301 87-434 52-381 (386)
89 1t3i_A Probable cysteine desul 100.0 6.2E-33 2.1E-37 278.9 26.0 340 36-433 27-414 (420)
90 2bwn_A 5-aminolevulinate synth 100.0 1E-32 3.5E-37 276.1 26.6 344 36-431 46-399 (401)
91 1kmj_A Selenocysteine lyase; p 100.0 1.1E-32 3.6E-37 275.8 25.1 341 36-432 22-405 (406)
92 2ch1_A 3-hydroxykynurenine tra 100.0 1.1E-32 3.6E-37 275.3 24.6 300 86-435 53-386 (396)
93 1elu_A L-cysteine/L-cystine C- 100.0 1.7E-33 5.8E-38 280.2 16.5 334 37-428 16-388 (390)
94 1svv_A Threonine aldolase; str 100.0 9.8E-32 3.3E-36 264.3 28.1 337 36-431 13-357 (359)
95 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 6.1E-33 2.1E-37 274.4 17.1 337 36-432 7-370 (371)
96 2w8t_A SPT, serine palmitoyltr 100.0 2.2E-31 7.7E-36 268.7 28.1 345 34-436 62-419 (427)
97 2huf_A Alanine glyoxylate amin 100.0 1.3E-31 4.4E-36 267.1 25.4 299 85-434 53-385 (393)
98 2z9v_A Aspartate aminotransfer 100.0 1.4E-31 4.9E-36 266.7 25.3 299 85-434 43-373 (392)
99 4hvk_A Probable cysteine desul 100.0 1.9E-31 6.5E-36 264.2 24.7 295 88-434 47-375 (382)
100 1iug_A Putative aspartate amin 100.0 6.2E-32 2.1E-36 265.1 20.7 294 85-434 35-350 (352)
101 4eb5_A Probable cysteine desul 100.0 9.4E-32 3.2E-36 266.8 21.5 299 85-435 44-376 (382)
102 3kki_A CAI-1 autoinducer synth 100.0 9.6E-31 3.3E-35 262.6 28.8 340 33-432 56-404 (409)
103 1e5e_A MGL, methionine gamma-l 100.0 5.4E-31 1.8E-35 263.9 26.4 286 77-431 53-394 (404)
104 3zrp_A Serine-pyruvate aminotr 100.0 4.9E-31 1.7E-35 261.7 25.9 296 86-434 37-365 (384)
105 1jg8_A L-ALLO-threonine aldola 100.0 1.3E-31 4.3E-36 262.7 21.0 330 35-431 2-345 (347)
106 1sff_A 4-aminobutyrate aminotr 100.0 1.3E-31 4.5E-36 270.1 21.3 350 33-432 38-424 (426)
107 2dkj_A Serine hydroxymethyltra 100.0 4E-31 1.4E-35 264.8 24.7 340 36-431 23-387 (407)
108 1m32_A 2-aminoethylphosphonate 100.0 2.2E-31 7.7E-36 262.3 22.1 300 84-431 37-364 (366)
109 3f9t_A TDC, L-tyrosine decarbo 100.0 5.8E-31 2E-35 262.1 24.9 304 85-430 66-396 (397)
110 3lvm_A Cysteine desulfurase; s 100.0 1.7E-31 5.8E-36 269.0 21.1 340 32-439 17-406 (423)
111 3nnk_A Ureidoglycine-glyoxylat 100.0 1E-30 3.6E-35 262.0 26.3 298 87-435 49-393 (411)
112 3i4j_A Aminotransferase, class 100.0 1.1E-30 3.6E-35 264.0 25.4 363 29-432 22-428 (430)
113 3cai_A Possible aminotransfera 100.0 7.8E-31 2.7E-35 262.7 23.5 332 37-427 26-404 (406)
114 3kgw_A Alanine-glyoxylate amin 100.0 2.5E-30 8.4E-35 257.5 25.6 299 87-435 59-391 (393)
115 2ez2_A Beta-tyrosinase, tyrosi 100.0 9.1E-30 3.1E-34 259.1 30.0 345 37-433 43-432 (456)
116 1v72_A Aldolase; PLP-dependent 100.0 4.4E-30 1.5E-34 252.3 26.6 335 36-433 7-354 (356)
117 2eo5_A 419AA long hypothetical 100.0 4.2E-30 1.4E-34 258.8 26.9 337 33-432 39-418 (419)
118 3isl_A Purine catabolism prote 100.0 1.1E-29 3.6E-34 255.1 29.0 298 87-435 47-393 (416)
119 2eh6_A Acoat, acetylornithine 100.0 4.1E-31 1.4E-35 261.8 17.5 324 33-429 25-375 (375)
120 2yrr_A Aminotransferase, class 100.0 1.2E-30 4E-35 255.8 19.7 295 85-431 34-352 (353)
121 3ruy_A Ornithine aminotransfer 100.0 3.8E-30 1.3E-34 256.6 22.2 328 29-429 29-391 (392)
122 2aeu_A Hypothetical protein MJ 100.0 2.4E-29 8.1E-34 249.4 26.0 299 88-433 58-372 (374)
123 2ord_A Acoat, acetylornithine 100.0 3.9E-30 1.3E-34 257.0 19.0 327 33-431 37-396 (397)
124 4adb_A Succinylornithine trans 100.0 4E-29 1.4E-33 250.2 25.1 334 32-433 35-401 (406)
125 3vax_A Putative uncharacterize 100.0 1.7E-30 6E-35 259.5 14.7 337 34-431 17-399 (400)
126 3n5m_A Adenosylmethionine-8-am 100.0 6.4E-29 2.2E-33 252.6 26.4 360 29-431 42-451 (452)
127 1vef_A Acetylornithine/acetyl- 100.0 7.9E-30 2.7E-34 254.6 18.9 326 33-429 42-394 (395)
128 3f0h_A Aminotransferase; RER07 100.0 7.7E-29 2.6E-33 245.5 24.9 297 87-431 51-373 (376)
129 3a9z_A Selenocysteine lyase; P 100.0 1.6E-29 5.4E-34 255.4 20.3 333 36-433 17-429 (432)
130 2bkw_A Alanine-glyoxylate amin 100.0 7E-29 2.4E-33 246.4 24.0 296 86-431 40-383 (385)
131 3dxv_A Alpha-amino-epsilon-cap 100.0 6.7E-29 2.3E-33 251.5 24.0 358 29-433 36-426 (439)
132 1s0a_A Adenosylmethionine-8-am 100.0 1.4E-28 5E-33 248.3 26.0 338 34-432 41-424 (429)
133 3nx3_A Acoat, acetylornithine 100.0 1.5E-28 5E-33 245.4 25.2 338 29-431 29-394 (395)
134 1zod_A DGD, 2,2-dialkylglycine 100.0 1.8E-28 6.2E-33 247.8 26.1 351 33-431 40-431 (433)
135 4ffc_A 4-aminobutyrate aminotr 100.0 1E-28 3.4E-33 251.1 24.3 363 29-433 57-450 (453)
136 3n0l_A Serine hydroxymethyltra 100.0 1.6E-28 5.6E-33 246.6 24.3 362 37-448 26-405 (417)
137 3gju_A Putative aminotransfera 100.0 5.6E-28 1.9E-32 246.1 28.4 360 29-432 44-456 (460)
138 2pb2_A Acetylornithine/succiny 100.0 1.8E-28 6.1E-33 246.9 24.1 332 32-431 53-417 (420)
139 2oga_A Transaminase; PLP-depen 100.0 7.8E-29 2.7E-33 247.8 20.3 326 36-433 30-397 (399)
140 3ffr_A Phosphoserine aminotran 100.0 1.7E-28 5.9E-33 241.3 22.0 288 87-429 42-361 (362)
141 1b9h_A AHBA synthase, protein 100.0 4.7E-28 1.6E-32 241.1 25.3 298 79-431 33-387 (388)
142 3ecd_A Serine hydroxymethyltra 100.0 6.6E-28 2.2E-32 242.7 26.5 345 37-432 33-397 (425)
143 3lws_A Aromatic amino acid bet 100.0 2.3E-28 7.9E-33 240.5 22.2 297 78-429 41-356 (357)
144 4a6r_A Omega transaminase; tra 100.0 2.5E-27 8.4E-32 241.3 29.6 357 29-433 43-450 (459)
145 2rfv_A Methionine gamma-lyase; 100.0 1.4E-27 4.7E-32 238.8 27.0 279 85-427 65-395 (398)
146 3pj0_A LMO0305 protein; struct 100.0 1.4E-28 4.7E-33 242.2 19.0 328 37-428 14-358 (359)
147 3gbx_A Serine hydroxymethyltra 100.0 3.6E-28 1.2E-32 244.2 21.8 360 37-448 31-412 (420)
148 3l44_A Glutamate-1-semialdehyd 100.0 7.8E-28 2.7E-32 243.3 23.3 351 29-433 48-431 (434)
149 3oks_A 4-aminobutyrate transam 100.0 5.3E-27 1.8E-31 238.3 29.4 360 29-431 54-450 (451)
150 2po3_A 4-dehydrase; external a 100.0 8E-28 2.7E-32 242.4 21.7 326 40-433 20-387 (424)
151 1mdo_A ARNB aminotransferase; 100.0 2.2E-27 7.6E-32 236.5 24.6 298 80-432 35-386 (393)
152 1w23_A Phosphoserine aminotran 100.0 2.9E-28 9.8E-33 239.9 16.9 283 87-431 51-359 (360)
153 3dod_A Adenosylmethionine-8-am 100.0 2E-27 7E-32 241.2 23.4 353 29-432 37-443 (448)
154 3fq8_A Glutamate-1-semialdehyd 100.0 3.1E-27 1.1E-31 238.3 23.9 344 29-431 45-426 (427)
155 3k28_A Glutamate-1-semialdehyd 100.0 3.8E-27 1.3E-31 237.9 23.9 345 29-432 46-427 (429)
156 2c0r_A PSAT, phosphoserine ami 100.0 5.4E-28 1.8E-32 238.4 17.2 288 86-432 47-361 (362)
157 1ibj_A CBL, cystathionine beta 100.0 1.7E-26 5.9E-31 234.4 28.2 295 78-431 125-461 (464)
158 1wyu_B Glycine dehydrogenase s 100.0 1.1E-27 3.7E-32 244.9 19.5 302 83-431 102-440 (474)
159 1ax4_A Tryptophanase; tryptoph 100.0 1.2E-26 4E-31 236.8 27.1 322 79-434 71-443 (467)
160 3mad_A Sphingosine-1-phosphate 100.0 4E-27 1.4E-31 243.2 23.7 310 80-434 131-471 (514)
161 1qz9_A Kynureninase; kynurenin 100.0 1.4E-27 4.8E-32 239.8 19.0 326 36-433 27-403 (416)
162 3a8u_X Omega-amino acid--pyruv 100.0 9.1E-27 3.1E-31 236.5 24.9 346 33-432 47-447 (449)
163 2oat_A Ornithine aminotransfer 100.0 7.4E-27 2.5E-31 236.3 24.0 328 34-431 74-438 (439)
164 3tfu_A Adenosylmethionine-8-am 100.0 4E-27 1.4E-31 239.4 22.0 342 34-433 71-454 (457)
165 1rv3_A Serine hydroxymethyltra 100.0 9.2E-27 3.2E-31 238.3 24.4 344 37-431 45-430 (483)
166 1z7d_A Ornithine aminotransfer 100.0 2E-26 6.7E-31 232.9 26.3 331 33-432 62-429 (433)
167 3h7f_A Serine hydroxymethyltra 99.9 7.7E-27 2.6E-31 236.8 22.4 342 37-434 46-416 (447)
168 3cog_A Cystathionine gamma-lya 99.9 1.5E-26 5.1E-31 231.4 23.3 193 78-319 62-262 (403)
169 2vi8_A Serine hydroxymethyltra 99.9 5.2E-26 1.8E-30 227.4 27.1 294 91-433 76-388 (405)
170 1pff_A Methionine gamma-lyase; 99.9 8.6E-27 2.9E-31 226.9 20.6 276 88-428 2-330 (331)
171 1cs1_A CGS, protein (cystathio 99.9 9.3E-26 3.2E-30 224.5 27.9 279 85-431 53-382 (386)
172 3i5t_A Aminotransferase; pyrid 99.9 7.3E-26 2.5E-30 231.2 26.9 355 29-434 47-456 (476)
173 2fyf_A PSAT, phosphoserine ami 99.9 2.8E-27 9.6E-32 236.4 15.4 282 87-431 81-397 (398)
174 3hmu_A Aminotransferase, class 99.9 4.1E-26 1.4E-30 232.7 24.3 354 29-433 48-453 (472)
175 3dr4_A Putative perosamine syn 99.9 1.2E-26 4E-31 231.3 19.5 329 30-429 16-390 (391)
176 3uwc_A Nucleotide-sugar aminot 99.9 2.7E-26 9.3E-31 227.1 21.8 323 37-433 7-372 (374)
177 2c81_A Glutamine-2-deoxy-scyll 99.9 9.6E-26 3.3E-30 226.8 26.1 306 78-433 32-415 (418)
178 3mc6_A Sphingosine-1-phosphate 99.9 1.5E-26 5.3E-31 237.9 19.9 312 80-435 99-440 (497)
179 2cy8_A D-phgat, D-phenylglycin 99.9 1.8E-25 6.1E-30 227.3 26.1 332 33-433 54-436 (453)
180 2epj_A Glutamate-1-semialdehyd 99.9 2E-25 6.8E-30 225.6 25.8 338 29-432 49-431 (434)
181 2e7u_A Glutamate-1-semialdehyd 99.9 3.8E-25 1.3E-29 222.9 27.4 331 33-429 49-424 (424)
182 3e9k_A Kynureninase; kynurenin 99.9 9.2E-26 3.1E-30 230.1 23.1 292 87-432 114-461 (465)
183 2fnu_A Aminotransferase; prote 99.9 3.2E-25 1.1E-29 219.3 26.2 293 83-433 31-373 (375)
184 3ndn_A O-succinylhomoserine su 99.9 7.6E-26 2.6E-30 226.7 21.7 287 88-429 81-413 (414)
185 1gc0_A Methionine gamma-lyase; 99.9 1.1E-24 3.7E-29 217.7 28.8 280 85-428 66-397 (398)
186 4e77_A Glutamate-1-semialdehyd 99.9 5.8E-25 2E-29 221.9 26.0 340 29-431 46-428 (429)
187 2oqx_A Tryptophanase; lyase, p 99.9 8.5E-26 2.9E-30 230.4 19.9 320 79-433 69-443 (467)
188 3acz_A Methionine gamma-lyase; 99.9 2.9E-25 9.9E-30 221.2 22.6 278 85-430 60-387 (389)
189 1qgn_A Protein (cystathionine 99.9 2.3E-24 7.9E-29 217.2 29.1 282 86-431 116-444 (445)
190 3qhx_A Cystathionine gamma-syn 99.9 1.8E-24 6E-29 215.6 27.3 281 86-429 68-391 (392)
191 1o69_A Aminotransferase; struc 99.9 2.8E-24 9.6E-29 214.4 28.6 301 80-430 26-385 (394)
192 2cb1_A O-acetyl homoserine sul 99.9 5.2E-24 1.8E-28 213.7 30.6 285 78-427 48-411 (412)
193 2dgk_A GAD-beta, GADB, glutama 99.9 3.2E-25 1.1E-29 225.3 21.7 316 79-434 72-436 (452)
194 1n8p_A Cystathionine gamma-lya 99.9 6.9E-25 2.4E-29 218.6 23.0 282 85-428 56-391 (393)
195 2cjg_A L-lysine-epsilon aminot 99.9 1.8E-24 6E-29 219.6 24.9 340 33-431 51-447 (449)
196 3nyt_A Aminotransferase WBPE; 99.9 1.1E-24 3.8E-29 215.1 19.9 289 79-428 30-360 (367)
197 3frk_A QDTB; aminotransferase, 99.9 9.3E-25 3.2E-29 216.1 18.2 298 79-433 31-369 (373)
198 2okj_A Glutamate decarboxylase 99.9 2.2E-23 7.5E-28 214.6 27.3 323 80-431 124-501 (504)
199 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.1E-23 3.9E-28 212.9 24.1 295 80-431 58-435 (437)
200 1js3_A DDC;, DOPA decarboxylas 99.9 1.9E-23 6.5E-28 214.2 25.3 322 79-434 104-476 (486)
201 3hbx_A GAD 1, glutamate decarb 99.9 4.2E-24 1.5E-28 219.5 19.8 312 84-434 91-446 (502)
202 3vp6_A Glutamate decarboxylase 99.9 7E-23 2.4E-27 210.8 28.9 327 78-433 125-506 (511)
203 3ke3_A Putative serine-pyruvat 99.9 2.3E-23 8E-28 206.6 24.5 300 88-432 35-376 (379)
204 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.9E-25 1.3E-29 224.0 10.0 288 82-433 55-354 (446)
205 2z67_A O-phosphoseryl-tRNA(SEC 99.9 7.2E-24 2.5E-28 215.4 19.3 301 87-429 132-455 (456)
206 3ri6_A O-acetylhomoserine sulf 99.9 9.8E-24 3.4E-28 212.0 19.7 280 86-429 84-429 (430)
207 2qma_A Diaminobutyrate-pyruvat 99.9 2E-22 6.8E-27 207.1 25.6 316 80-431 132-495 (497)
208 3ju7_A Putative PLP-dependent 99.9 3.7E-22 1.3E-26 197.7 24.9 292 85-432 37-375 (377)
209 2jis_A Cysteine sulfinic acid 99.9 1.2E-21 4.3E-26 202.0 29.6 321 80-431 140-514 (515)
210 3nmy_A Xometc, cystathionine g 99.9 9E-22 3.1E-26 196.2 25.4 280 87-430 70-397 (400)
211 2fq6_A Cystathionine beta-lyas 99.9 2E-22 7E-27 201.6 20.2 208 86-348 84-300 (415)
212 2a7v_A Serine hydroxymethyltra 99.9 1.5E-21 5.1E-26 198.3 26.6 303 87-432 99-441 (490)
213 4e1o_A HDC, histidine decarbox 99.9 2.3E-21 8E-26 198.2 25.8 322 78-432 108-478 (481)
214 1ohv_A 4-aminobutyrate aminotr 99.9 8.5E-22 2.9E-26 200.9 22.0 351 29-432 56-471 (472)
215 3i16_A Aluminum resistance pro 99.9 1.9E-21 6.4E-26 194.5 23.3 254 79-385 69-353 (427)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.9 5.4E-21 1.8E-25 190.3 26.4 292 79-425 29-389 (390)
217 3k40_A Aromatic-L-amino-acid d 99.9 2.3E-21 7.7E-26 197.8 24.1 320 79-432 104-471 (475)
218 2ctz_A O-acetyl-L-homoserine s 99.9 2.5E-21 8.4E-26 194.7 23.0 156 86-288 60-221 (421)
219 3jzl_A Putative cystathionine 99.9 5.6E-21 1.9E-25 190.4 24.9 251 79-385 55-336 (409)
220 3hvy_A Cystathionine beta-lyas 99.9 1.9E-21 6.6E-26 194.4 21.0 252 79-385 70-353 (427)
221 2yky_A Beta-transaminase; tran 99.8 2.5E-24 8.6E-29 217.5 0.0 339 29-433 93-461 (465)
222 1wyu_A Glycine dehydrogenase ( 99.9 2.4E-21 8.1E-26 195.9 19.1 286 85-429 105-437 (438)
223 1c4k_A Protein (ornithine deca 99.9 3.2E-21 1.1E-25 204.3 19.6 312 85-433 174-567 (730)
224 3ht4_A Aluminum resistance pro 99.9 1.1E-20 3.8E-25 189.8 21.5 254 88-386 65-343 (431)
225 2vyc_A Biodegradative arginine 99.8 3.5E-20 1.2E-24 198.0 21.4 178 86-289 207-401 (755)
226 3n75_A LDC, lysine decarboxyla 99.8 4.6E-18 1.6E-22 178.8 18.3 176 85-290 196-383 (715)
227 3e77_A Phosphoserine aminotran 99.7 1.8E-17 6.1E-22 162.7 14.3 288 87-432 61-375 (377)
228 3m5u_A Phosphoserine aminotran 99.7 3.1E-16 1.1E-20 153.4 21.5 283 86-433 52-361 (361)
229 3qm2_A Phosphoserine aminotran 99.7 4.6E-17 1.6E-21 160.7 15.5 287 85-432 73-385 (386)
230 4ao9_A Beta-phenylalanine amin 99.7 1.2E-15 4E-20 153.1 25.2 340 28-434 79-448 (454)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 2.3E-14 7.7E-19 140.6 23.4 317 88-434 116-463 (501)
232 4atq_A 4-aminobutyrate transam 99.6 1E-13 3.5E-18 139.5 25.7 364 27-432 55-455 (456)
233 3ou5_A Serine hydroxymethyltra 99.6 2.5E-13 8.6E-18 132.6 22.5 302 88-431 100-440 (490)
234 4e3q_A Pyruvate transaminase; 99.6 3E-12 1E-16 129.4 30.6 348 29-432 60-468 (473)
235 4a0g_A Adenosylmethionine-8-am 99.6 6E-14 2.1E-18 151.1 17.4 218 188-433 593-829 (831)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.5 7.9E-12 2.7E-16 124.2 26.6 315 88-432 98-443 (450)
237 4fgs_A Probable dehydrogenase 80.2 5.3 0.00018 36.5 8.0 101 110-217 30-133 (273)
238 3tpc_A Short chain alcohol deh 76.7 16 0.00055 32.5 10.3 103 108-217 6-115 (257)
239 3rwb_A TPLDH, pyridoxal 4-dehy 74.1 9.9 0.00034 33.8 8.0 103 108-217 5-110 (247)
240 3gem_A Short chain dehydrogena 73.3 13 0.00045 33.3 8.7 101 108-217 26-128 (260)
241 4fn4_A Short chain dehydrogena 72.8 16 0.00055 32.8 9.1 103 108-217 6-115 (254)
242 3ged_A Short-chain dehydrogena 72.8 15 0.0005 32.9 8.7 99 111-217 4-105 (247)
243 4dqx_A Probable oxidoreductase 70.4 16 0.00054 33.1 8.6 103 108-217 26-131 (277)
244 4g81_D Putative hexonate dehyd 70.0 24 0.00084 31.6 9.6 104 107-217 7-116 (255)
245 4e6p_A Probable sorbitol dehyd 68.7 20 0.00067 32.0 8.8 103 108-217 7-112 (259)
246 4eso_A Putative oxidoreductase 68.4 19 0.00067 32.0 8.7 103 108-217 7-112 (255)
247 2o23_A HADH2 protein; HSD17B10 68.0 37 0.0012 30.0 10.5 102 108-216 11-121 (265)
248 4gkb_A 3-oxoacyl-[acyl-carrier 67.3 35 0.0012 30.6 10.1 104 107-217 5-112 (258)
249 3m1a_A Putative dehydrogenase; 66.3 19 0.00064 32.5 8.2 101 110-217 6-109 (281)
250 3ppi_A 3-hydroxyacyl-COA dehyd 66.2 23 0.0008 31.9 8.9 103 108-217 29-139 (281)
251 3tzq_B Short-chain type dehydr 66.1 32 0.0011 30.8 9.8 103 108-217 10-117 (271)
252 3gh5_A HEX1, beta-hexosaminida 65.7 11 0.00039 37.8 6.9 25 202-226 249-273 (525)
253 3gvc_A Oxidoreductase, probabl 65.6 14 0.0005 33.4 7.3 102 109-217 29-133 (277)
254 3pxx_A Carveol dehydrogenase; 65.2 17 0.00057 32.9 7.7 103 108-217 9-127 (287)
255 3h7a_A Short chain dehydrogena 65.0 70 0.0024 28.1 11.7 102 108-217 6-113 (252)
256 1uls_A Putative 3-oxoacyl-acyl 64.9 28 0.00096 30.6 9.0 99 110-217 6-107 (245)
257 3l6e_A Oxidoreductase, short-c 64.8 17 0.00059 31.8 7.5 100 111-217 5-107 (235)
258 3sc4_A Short chain dehydrogena 64.7 54 0.0018 29.6 11.0 104 107-217 7-123 (285)
259 3grp_A 3-oxoacyl-(acyl carrier 64.4 18 0.0006 32.6 7.5 103 108-217 26-131 (266)
260 3dii_A Short-chain dehydrogena 64.4 25 0.00087 31.0 8.6 99 111-217 4-105 (247)
261 3n74_A 3-ketoacyl-(acyl-carrie 63.8 26 0.00088 31.1 8.6 104 107-217 7-114 (261)
262 2ew8_A (S)-1-phenylethanol deh 62.6 45 0.0015 29.3 9.9 102 109-217 7-112 (249)
263 3rih_A Short chain dehydrogena 62.1 38 0.0013 30.9 9.5 103 108-217 40-149 (293)
264 3kvo_A Hydroxysteroid dehydrog 60.6 1E+02 0.0036 28.7 12.5 101 109-216 45-158 (346)
265 3op4_A 3-oxoacyl-[acyl-carrier 60.1 25 0.00085 31.1 7.7 103 108-217 8-113 (248)
266 3e03_A Short chain dehydrogena 59.1 83 0.0028 28.0 11.2 104 107-217 4-120 (274)
267 3t7c_A Carveol dehydrogenase; 58.6 47 0.0016 30.2 9.5 103 108-217 27-148 (299)
268 1hdc_A 3-alpha, 20 beta-hydrox 57.6 47 0.0016 29.3 9.1 102 109-217 5-109 (254)
269 3uve_A Carveol dehydrogenase ( 56.8 33 0.0011 30.9 8.1 103 108-217 10-135 (286)
270 1jak_A Beta-N-acetylhexosamini 55.9 19 0.00065 36.0 6.6 24 203-226 225-248 (512)
271 1hxh_A 3BETA/17BETA-hydroxyste 55.8 41 0.0014 29.7 8.3 102 109-217 6-110 (253)
272 3zu3_A Putative reductase YPO4 55.4 1.5E+02 0.0051 28.5 12.9 81 111-198 49-145 (405)
273 3lyl_A 3-oxoacyl-(acyl-carrier 54.9 67 0.0023 27.9 9.6 102 109-217 5-112 (247)
274 4dmm_A 3-oxoacyl-[acyl-carrier 54.5 33 0.0011 30.7 7.6 104 107-217 26-136 (269)
275 3lf2_A Short chain oxidoreduct 54.3 68 0.0023 28.4 9.7 105 107-217 6-117 (265)
276 4fc7_A Peroxisomal 2,4-dienoyl 54.3 49 0.0017 29.7 8.8 102 109-217 27-135 (277)
277 2gjx_A Beta-hexosaminidase alp 54.2 24 0.00082 35.3 7.0 109 105-227 96-233 (507)
278 3tsc_A Putative oxidoreductase 53.9 37 0.0013 30.4 7.9 103 108-217 10-131 (277)
279 3ksu_A 3-oxoacyl-acyl carrier 53.5 1.2E+02 0.004 26.8 12.7 104 107-217 9-121 (262)
280 4dyv_A Short-chain dehydrogena 52.6 37 0.0013 30.5 7.5 100 111-217 30-133 (272)
281 3is3_A 17BETA-hydroxysteroid d 52.5 33 0.0011 30.7 7.2 102 109-217 18-126 (270)
282 4ibo_A Gluconate dehydrogenase 52.5 66 0.0023 28.7 9.3 103 108-217 25-133 (271)
283 3ijr_A Oxidoreductase, short c 52.2 89 0.003 28.2 10.2 103 108-217 46-156 (291)
284 3r1i_A Short-chain type dehydr 51.7 83 0.0028 28.1 9.9 104 107-217 30-139 (276)
285 3v2g_A 3-oxoacyl-[acyl-carrier 51.4 45 0.0016 29.8 8.0 104 107-217 29-139 (271)
286 3gaf_A 7-alpha-hydroxysteroid 51.2 63 0.0021 28.5 8.8 103 108-217 11-118 (256)
287 3sx2_A Putative 3-ketoacyl-(ac 51.1 35 0.0012 30.6 7.2 101 108-217 12-128 (278)
288 2a4k_A 3-oxoacyl-[acyl carrier 51.0 52 0.0018 29.2 8.3 101 109-216 6-109 (263)
289 3edm_A Short chain dehydrogena 50.9 1.1E+02 0.0039 26.8 10.6 103 108-217 7-117 (259)
290 3s55_A Putative short-chain de 50.8 76 0.0026 28.3 9.5 103 108-217 9-129 (281)
291 3nyw_A Putative oxidoreductase 50.7 46 0.0016 29.3 7.8 103 109-217 7-116 (250)
292 3pgx_A Carveol dehydrogenase; 50.5 47 0.0016 29.8 8.0 103 108-217 14-135 (280)
293 1nff_A Putative oxidoreductase 50.5 68 0.0023 28.3 9.0 102 109-217 7-111 (260)
294 4b79_A PA4098, probable short- 49.8 90 0.0031 27.6 9.4 94 110-217 12-106 (242)
295 3rkr_A Short chain oxidoreduct 49.5 85 0.0029 27.7 9.5 102 109-217 29-137 (262)
296 3qlj_A Short chain dehydrogena 49.3 50 0.0017 30.4 8.1 102 109-217 27-144 (322)
297 3ezl_A Acetoacetyl-COA reducta 49.2 66 0.0023 28.2 8.7 101 110-217 14-121 (256)
298 3imf_A Short chain dehydrogena 49.2 86 0.0029 27.6 9.4 102 109-217 6-113 (257)
299 3sju_A Keto reductase; short-c 48.8 74 0.0025 28.5 9.0 101 110-217 25-131 (279)
300 3ak4_A NADH-dependent quinucli 48.5 72 0.0025 28.1 8.8 103 108-217 11-116 (263)
301 3ucx_A Short chain dehydrogena 48.5 77 0.0026 28.0 9.0 103 108-217 10-119 (264)
302 3oec_A Carveol dehydrogenase ( 48.3 47 0.0016 30.5 7.7 102 109-217 46-165 (317)
303 3ek2_A Enoyl-(acyl-carrier-pro 48.1 58 0.002 28.7 8.2 102 108-217 13-127 (271)
304 3p19_A BFPVVD8, putative blue 47.8 92 0.0031 27.6 9.4 98 110-217 17-117 (266)
305 4iin_A 3-ketoacyl-acyl carrier 47.6 48 0.0016 29.5 7.5 104 107-217 27-137 (271)
306 3un1_A Probable oxidoreductase 47.4 1.1E+02 0.0039 26.9 10.0 97 108-217 27-126 (260)
307 3l77_A Short-chain alcohol deh 47.2 31 0.0011 30.0 6.0 100 111-217 4-110 (235)
308 3tfo_A Putative 3-oxoacyl-(acy 47.1 95 0.0032 27.6 9.4 100 111-217 6-111 (264)
309 3tjr_A Short chain dehydrogena 46.8 85 0.0029 28.5 9.2 103 108-217 30-138 (301)
310 3rd5_A Mypaa.01249.C; ssgcid, 46.7 36 0.0012 30.8 6.5 80 108-198 15-94 (291)
311 3nrc_A Enoyl-[acyl-carrier-pro 46.6 97 0.0033 27.6 9.5 101 109-217 26-138 (280)
312 2dtx_A Glucose 1-dehydrogenase 46.4 1.5E+02 0.0053 26.0 10.8 94 109-217 8-104 (264)
313 3o38_A Short chain dehydrogena 46.3 49 0.0017 29.3 7.3 104 108-217 21-131 (266)
314 2ehd_A Oxidoreductase, oxidore 46.2 73 0.0025 27.4 8.4 99 111-217 7-108 (234)
315 2epl_X N-acetyl-beta-D-glucosa 46.1 1.4E+02 0.0047 30.6 11.2 108 105-226 41-162 (627)
316 3pk0_A Short-chain dehydrogena 46.1 61 0.0021 28.7 7.9 104 108-217 9-118 (262)
317 2c07_A 3-oxoacyl-(acyl-carrier 46.0 1.1E+02 0.0039 27.2 9.9 101 110-217 45-151 (285)
318 4fhz_A Phospholipase/carboxyle 45.7 1.7E+02 0.0058 26.3 11.7 109 107-221 154-265 (285)
319 3v2h_A D-beta-hydroxybutyrate 45.6 97 0.0033 27.7 9.3 104 108-217 24-134 (281)
320 1xky_A Dihydrodipicolinate syn 45.3 1.7E+02 0.0057 26.7 10.9 107 87-229 64-174 (301)
321 4egf_A L-xylulose reductase; s 45.2 60 0.0021 28.8 7.7 103 108-217 19-128 (266)
322 2q2v_A Beta-D-hydroxybutyrate 44.9 1.4E+02 0.0047 26.0 10.1 100 110-216 5-108 (255)
323 3og9_A Protein YAHD A copper i 44.7 1.3E+02 0.0045 24.8 13.7 108 107-221 99-208 (209)
324 3osu_A 3-oxoacyl-[acyl-carrier 44.6 1.3E+02 0.0043 26.2 9.7 100 111-217 6-112 (246)
325 1now_A Beta-hexosaminidase bet 44.5 1.5E+02 0.005 29.5 11.0 108 105-226 102-237 (507)
326 1yde_A Retinal dehydrogenase/r 44.3 88 0.003 27.8 8.7 100 109-216 9-112 (270)
327 3gdg_A Probable NADP-dependent 44.1 1.1E+02 0.0037 26.9 9.3 103 108-217 19-131 (267)
328 3s8m_A Enoyl-ACP reductase; ro 44.1 1.8E+02 0.0062 28.1 11.2 82 110-198 62-160 (422)
329 3oid_A Enoyl-[acyl-carrier-pro 43.9 1E+02 0.0036 27.1 9.1 100 111-217 6-112 (258)
330 2wsb_A Galactitol dehydrogenas 43.8 86 0.0029 27.3 8.5 101 108-216 10-114 (254)
331 4imr_A 3-oxoacyl-(acyl-carrier 43.7 1.4E+02 0.0049 26.5 10.1 103 107-217 31-139 (275)
332 1o5k_A DHDPS, dihydrodipicolin 43.3 1.7E+02 0.0058 26.8 10.6 109 87-229 64-175 (306)
333 4h15_A Short chain alcohol deh 43.2 1.3E+02 0.0046 26.7 9.7 97 107-217 9-110 (261)
334 3u5t_A 3-oxoacyl-[acyl-carrier 43.1 1.4E+02 0.0047 26.4 9.9 102 109-217 27-135 (267)
335 2d1y_A Hypothetical protein TT 43.0 1.3E+02 0.0043 26.4 9.5 99 109-217 6-107 (256)
336 1c7s_A Beta-N-acetylhexosamini 42.8 31 0.001 36.8 5.9 25 202-226 393-417 (858)
337 2pnf_A 3-oxoacyl-[acyl-carrier 42.8 1.1E+02 0.0037 26.4 9.0 103 108-216 6-114 (248)
338 1vl8_A Gluconate 5-dehydrogena 42.6 1E+02 0.0034 27.4 8.8 103 108-217 20-129 (267)
339 3vtz_A Glucose 1-dehydrogenase 42.5 1.8E+02 0.006 25.7 10.5 95 108-216 13-110 (269)
340 2fwm_X 2,3-dihydro-2,3-dihydro 42.2 1.7E+02 0.0058 25.4 11.6 96 108-217 6-104 (250)
341 3zv4_A CIS-2,3-dihydrobiphenyl 42.2 33 0.0011 30.9 5.5 84 108-198 4-87 (281)
342 2jah_A Clavulanic acid dehydro 42.0 87 0.003 27.3 8.2 102 109-217 7-114 (247)
343 3v8b_A Putative dehydrogenase, 41.0 1.4E+02 0.0048 26.7 9.6 103 108-217 27-136 (283)
344 3a28_C L-2.3-butanediol dehydr 41.0 1.1E+02 0.0038 26.8 8.8 100 111-217 4-111 (258)
345 3r3s_A Oxidoreductase; structu 40.8 1E+02 0.0034 27.9 8.6 103 108-217 48-159 (294)
346 3ioy_A Short-chain dehydrogena 40.1 78 0.0027 29.1 7.8 103 109-217 8-117 (319)
347 3i1j_A Oxidoreductase, short c 40.1 1.2E+02 0.0041 26.2 8.9 103 109-217 14-125 (247)
348 1zk4_A R-specific alcohol dehy 39.7 1E+02 0.0036 26.6 8.4 104 109-217 6-112 (251)
349 1w6u_A 2,4-dienoyl-COA reducta 39.7 1.3E+02 0.0045 26.9 9.3 102 109-216 26-133 (302)
350 1h5q_A NADP-dependent mannitol 39.6 1.8E+02 0.0061 25.3 10.0 100 110-216 15-121 (265)
351 3tl3_A Short-chain type dehydr 39.4 59 0.002 28.6 6.7 98 109-217 9-113 (257)
352 2pd6_A Estradiol 17-beta-dehyd 39.3 1.2E+02 0.004 26.5 8.7 102 109-216 7-121 (264)
353 3u9l_A 3-oxoacyl-[acyl-carrier 39.2 1E+02 0.0036 28.3 8.6 101 110-217 6-117 (324)
354 3qiv_A Short-chain dehydrogena 39.1 1.2E+02 0.0042 26.3 8.7 103 108-217 8-119 (253)
355 1geg_A Acetoin reductase; SDR 38.8 1E+02 0.0034 27.0 8.1 100 111-217 4-109 (256)
356 1fmc_A 7 alpha-hydroxysteroid 38.8 1.9E+02 0.0064 24.9 10.0 103 108-216 10-116 (255)
357 2cfc_A 2-(R)-hydroxypropyl-COM 38.7 1.2E+02 0.0042 26.1 8.7 99 111-216 4-112 (250)
358 2yxg_A DHDPS, dihydrodipicolin 38.7 1.9E+02 0.0066 26.0 10.1 109 87-229 52-163 (289)
359 2rfg_A Dihydrodipicolinate syn 38.6 1.6E+02 0.0054 26.8 9.5 108 87-229 52-162 (297)
360 3dqp_A Oxidoreductase YLBE; al 38.4 1.2E+02 0.0042 25.5 8.5 68 111-196 2-70 (219)
361 3ai3_A NADPH-sorbose reductase 38.4 1.1E+02 0.0037 26.9 8.3 103 108-216 6-114 (263)
362 2wkj_A N-acetylneuraminate lya 38.2 1.5E+02 0.0051 27.1 9.3 109 87-229 63-174 (303)
363 2x9g_A PTR1, pteridine reducta 38.0 1.1E+02 0.0038 27.3 8.5 86 110-198 24-114 (288)
364 3uf0_A Short-chain dehydrogena 38.0 1.9E+02 0.0066 25.5 10.0 102 107-217 29-136 (273)
365 1vhx_A Putative holliday junct 37.6 60 0.002 26.3 5.7 59 169-232 40-101 (150)
366 3ftp_A 3-oxoacyl-[acyl-carrier 37.5 98 0.0034 27.5 7.9 102 109-217 28-135 (270)
367 2uvd_A 3-oxoacyl-(acyl-carrier 37.5 88 0.003 27.2 7.5 101 110-217 5-112 (246)
368 2rhc_B Actinorhodin polyketide 37.4 1.2E+02 0.0041 26.9 8.5 102 109-217 22-129 (277)
369 2ojp_A DHDPS, dihydrodipicolin 36.8 2.4E+02 0.0081 25.5 10.4 106 87-228 53-162 (292)
370 3cpr_A Dihydrodipicolinate syn 36.6 1.3E+02 0.0045 27.5 8.7 57 167-226 30-89 (304)
371 1x1t_A D(-)-3-hydroxybutyrate 36.5 1.1E+02 0.0039 26.7 8.1 101 111-217 6-113 (260)
372 3l21_A DHDPS, dihydrodipicolin 36.1 1.2E+02 0.0041 27.8 8.3 58 167-227 29-89 (304)
373 2vc6_A MOSA, dihydrodipicolina 35.9 2.5E+02 0.0084 25.4 10.8 109 87-229 52-163 (292)
374 1yb1_A 17-beta-hydroxysteroid 35.8 1.6E+02 0.0055 26.0 9.1 83 108-196 30-115 (272)
375 1yxm_A Pecra, peroxisomal tran 35.7 1.7E+02 0.0058 26.2 9.4 102 109-216 18-129 (303)
376 3dhn_A NAD-dependent epimerase 35.0 1.7E+02 0.0058 24.6 8.9 69 110-196 5-74 (227)
377 2b4q_A Rhamnolipids biosynthes 35.0 1.4E+02 0.0049 26.5 8.6 102 108-217 28-135 (276)
378 2ehh_A DHDPS, dihydrodipicolin 34.7 2.6E+02 0.0088 25.3 10.8 109 87-229 52-163 (294)
379 3awd_A GOX2181, putative polyo 34.5 2.1E+02 0.0071 24.7 9.6 103 108-216 12-120 (260)
380 2nm0_A Probable 3-oxacyl-(acyl 34.2 1.8E+02 0.0061 25.4 9.0 73 109-195 21-93 (253)
381 2wkj_A N-acetylneuraminate lya 34.2 1.8E+02 0.006 26.6 9.1 58 167-227 25-85 (303)
382 3cxt_A Dehydrogenase with diff 34.2 1.6E+02 0.0054 26.5 8.8 103 108-217 33-141 (291)
383 3qze_A DHDPS, dihydrodipicolin 34.0 2.5E+02 0.0084 25.8 10.1 108 87-229 75-185 (314)
384 1y80_A Predicted cobalamin bin 33.9 1.8E+02 0.0061 24.7 8.7 56 150-222 112-167 (210)
385 1iy8_A Levodione reductase; ox 33.9 1.3E+02 0.0043 26.6 8.0 103 109-217 13-123 (267)
386 3guy_A Short-chain dehydrogena 33.9 68 0.0023 27.6 6.0 96 112-217 4-102 (230)
387 1ae1_A Tropinone reductase-I; 33.7 2.5E+02 0.0084 24.7 10.1 103 108-217 20-129 (273)
388 3svt_A Short-chain type dehydr 33.7 1.4E+02 0.0048 26.5 8.4 103 108-217 10-122 (281)
389 3fkr_A L-2-keto-3-deoxyarabona 33.6 2.8E+02 0.0095 25.3 11.8 113 87-231 60-175 (309)
390 3b4u_A Dihydrodipicolinate syn 33.6 2.2E+02 0.0074 25.8 9.6 109 87-228 55-170 (294)
391 3gk3_A Acetoacetyl-COA reducta 33.6 2.4E+02 0.0083 24.6 9.9 100 111-217 27-133 (269)
392 3asu_A Short-chain dehydrogena 33.5 59 0.002 28.6 5.6 99 112-217 3-105 (248)
393 3afn_B Carbonyl reductase; alp 33.4 2.2E+02 0.0077 24.4 9.6 101 109-216 7-115 (258)
394 3e48_A Putative nucleoside-dip 33.2 95 0.0032 27.6 7.1 94 112-223 3-98 (289)
395 3flu_A DHDPS, dihydrodipicolin 33.0 1.3E+02 0.0043 27.5 7.9 58 167-227 21-81 (297)
396 2hmc_A AGR_L_411P, dihydrodipi 32.9 1.9E+02 0.0067 26.9 9.3 91 111-230 94-188 (344)
397 2q1w_A Putative nucleotide sug 32.6 2.8E+02 0.0096 25.1 11.5 101 110-223 22-129 (333)
398 2ae2_A Protein (tropinone redu 32.6 2.5E+02 0.0085 24.4 10.1 103 108-217 8-117 (260)
399 4iiu_A 3-oxoacyl-[acyl-carrier 32.4 2.2E+02 0.0076 24.9 9.4 101 110-217 27-134 (267)
400 2z1n_A Dehydrogenase; reductas 32.2 1.7E+02 0.006 25.5 8.6 101 109-216 7-114 (260)
401 3ruf_A WBGU; rossmann fold, UD 32.1 1.4E+02 0.0049 27.2 8.4 33 108-140 24-56 (351)
402 2yl5_A Beta-N-acetylhexosamini 32.1 35 0.0012 33.4 4.0 28 199-226 85-112 (442)
403 4e3z_A Putative oxidoreductase 31.9 1.1E+02 0.0039 26.9 7.4 100 111-217 28-135 (272)
404 4dry_A 3-oxoacyl-[acyl-carrier 31.8 84 0.0029 28.2 6.5 103 109-217 33-142 (281)
405 1g0o_A Trihydroxynaphthalene r 31.7 2.4E+02 0.0081 25.0 9.6 101 110-217 30-137 (283)
406 2r8w_A AGR_C_1641P; APC7498, d 31.7 2E+02 0.0067 26.7 9.1 108 87-229 86-196 (332)
407 1xkq_A Short-chain reductase f 31.6 1.2E+02 0.0041 27.0 7.5 101 110-217 7-120 (280)
408 2bgk_A Rhizome secoisolaricire 31.3 1.8E+02 0.0063 25.4 8.7 103 109-217 16-124 (278)
409 3f1l_A Uncharacterized oxidore 31.3 1.7E+02 0.0057 25.5 8.3 105 109-217 12-123 (252)
410 3qvo_A NMRA family protein; st 31.1 2.2E+02 0.0074 24.3 9.0 30 110-139 24-54 (236)
411 3tox_A Short chain dehydrogena 31.1 2.3E+02 0.0077 25.2 9.3 102 109-217 8-116 (280)
412 2pzm_A Putative nucleotide sug 31.1 3E+02 0.01 24.9 12.6 76 109-196 20-95 (330)
413 1zem_A Xylitol dehydrogenase; 30.9 1.6E+02 0.0054 25.8 8.1 103 108-217 6-115 (262)
414 1xky_A Dihydrodipicolinate syn 30.6 1.5E+02 0.005 27.1 7.9 57 167-226 26-85 (301)
415 3tak_A DHDPS, dihydrodipicolin 30.6 1.4E+02 0.0048 27.0 7.7 58 167-227 15-75 (291)
416 3orf_A Dihydropteridine reduct 30.3 2.7E+02 0.0091 24.1 10.2 90 111-216 24-117 (251)
417 2ojp_A DHDPS, dihydrodipicolin 30.3 1.4E+02 0.0049 27.0 7.7 56 168-226 16-74 (292)
418 1xhl_A Short-chain dehydrogena 30.3 1.1E+02 0.0039 27.5 7.1 102 109-217 26-138 (297)
419 3o9z_A Lipopolysaccaride biosy 30.1 85 0.0029 28.8 6.2 27 206-232 107-133 (312)
420 3i6i_A Putative leucoanthocyan 30.0 1.3E+02 0.0044 27.7 7.6 103 110-232 11-121 (346)
421 3dz1_A Dihydrodipicolinate syn 29.9 1.3E+02 0.0045 27.6 7.5 58 167-227 22-81 (313)
422 1ja9_A 4HNR, 1,3,6,8-tetrahydr 29.7 1.4E+02 0.0048 26.1 7.6 101 109-216 21-128 (274)
423 1ofu_X SULA, hypothetical prot 29.5 1.9E+02 0.0066 22.2 7.2 79 132-225 32-113 (119)
424 1yo6_A Putative carbonyl reduc 29.4 2.6E+02 0.009 23.7 10.7 101 111-217 5-112 (250)
425 1xg5_A ARPG836; short chain de 28.7 2.8E+02 0.0096 24.3 9.5 103 109-217 32-141 (279)
426 3e2i_A Thymidine kinase; Zn-bi 28.7 88 0.003 27.2 5.5 109 118-251 42-153 (219)
427 1iv0_A Hypothetical protein; r 28.6 85 0.0029 23.3 4.8 59 169-232 36-96 (98)
428 1spx_A Short-chain reductase f 28.5 1.8E+02 0.006 25.7 8.0 82 110-198 7-94 (278)
429 1qsg_A Enoyl-[acyl-carrier-pro 28.3 2.5E+02 0.0087 24.4 9.0 80 110-198 10-95 (265)
430 2yl6_A Beta-N-acetylhexosamini 28.3 34 0.0012 33.4 3.2 27 200-226 83-109 (434)
431 2h7i_A Enoyl-[acyl-carrier-pro 28.2 2.2E+02 0.0076 24.9 8.7 101 110-217 8-122 (269)
432 2gjh_A Designed protein; oblig 28.2 1.2E+02 0.004 19.2 5.2 31 405-435 3-33 (62)
433 1cyd_A Carbonyl reductase; sho 27.9 2E+02 0.0068 24.6 8.1 98 107-216 5-105 (244)
434 1edo_A Beta-keto acyl carrier 27.9 2.2E+02 0.0074 24.3 8.4 98 112-216 4-108 (244)
435 2pd4_A Enoyl-[acyl-carrier-pro 27.8 3.1E+02 0.011 24.0 10.8 101 109-217 6-118 (275)
436 3h5d_A DHDPS, dihydrodipicolin 27.8 1.3E+02 0.0045 27.6 7.1 58 167-227 21-81 (311)
437 1f6k_A N-acetylneuraminate lya 27.4 1.5E+02 0.0053 26.8 7.4 56 168-226 18-77 (293)
438 3kzv_A Uncharacterized oxidore 27.3 1.6E+02 0.0053 25.8 7.3 99 112-217 5-109 (254)
439 4gqr_A Pancreatic alpha-amylas 27.3 39 0.0013 33.1 3.5 28 207-234 75-102 (496)
440 3qze_A DHDPS, dihydrodipicolin 27.2 1.3E+02 0.0044 27.7 6.9 58 167-227 37-97 (314)
441 1f6k_A N-acetylneuraminate lya 27.0 1.6E+02 0.0054 26.8 7.4 108 87-229 56-166 (293)
442 3d3w_A L-xylulose reductase; u 26.9 2.1E+02 0.0072 24.4 8.1 97 108-216 6-105 (244)
443 3m5v_A DHDPS, dihydrodipicolin 26.7 1.3E+02 0.0046 27.4 6.9 57 168-227 22-82 (301)
444 2nuw_A 2-keto-3-deoxygluconate 26.7 1.8E+02 0.006 26.3 7.6 51 168-221 14-64 (288)
445 1gee_A Glucose 1-dehydrogenase 26.6 1.7E+02 0.0057 25.4 7.5 101 109-216 7-114 (261)
446 1w3i_A EDA, 2-keto-3-deoxy glu 26.6 1.8E+02 0.0062 26.3 7.7 51 168-221 14-64 (293)
447 2zcu_A Uncharacterized oxidore 26.5 1.7E+02 0.0058 25.7 7.6 93 112-223 2-96 (286)
448 2r8w_A AGR_C_1641P; APC7498, d 26.5 1.6E+02 0.0056 27.2 7.5 57 168-227 49-108 (332)
449 3si9_A DHDPS, dihydrodipicolin 26.4 3.8E+02 0.013 24.5 10.4 109 87-229 74-185 (315)
450 3i4f_A 3-oxoacyl-[acyl-carrier 26.2 2.5E+02 0.0087 24.3 8.6 101 110-217 8-117 (264)
451 2orv_A Thymidine kinase; TP4A 26.1 3.3E+02 0.011 23.8 8.9 106 119-251 34-141 (234)
452 3k31_A Enoyl-(acyl-carrier-pro 26.1 1.5E+02 0.0052 26.6 7.2 102 108-217 29-142 (296)
453 3b4u_A Dihydrodipicolinate syn 26.0 1.9E+02 0.0064 26.2 7.7 51 168-221 18-68 (294)
454 2pcq_A Putative dihydrodipicol 26.0 86 0.0029 28.4 5.3 54 168-226 13-66 (283)
455 4dpp_A DHDPS 2, dihydrodipicol 25.8 2.2E+02 0.0076 26.7 8.3 58 167-227 73-133 (360)
456 2ekp_A 2-deoxy-D-gluconate 3-d 25.7 1.6E+02 0.0054 25.3 7.0 30 111-140 4-33 (239)
457 4a29_A Engineered retro-aldol 25.6 67 0.0023 28.7 4.3 75 135-227 81-158 (258)
458 3f9i_A 3-oxoacyl-[acyl-carrier 25.5 1.2E+02 0.0042 26.2 6.2 80 108-198 13-92 (249)
459 2nwq_A Probable short-chain de 25.2 1E+02 0.0034 27.5 5.7 102 110-217 22-128 (272)
460 3s5o_A 4-hydroxy-2-oxoglutarat 25.2 1.4E+02 0.0046 27.4 6.6 58 167-227 28-88 (307)
461 1oaa_A Sepiapterin reductase; 25.1 3.2E+02 0.011 23.6 9.1 103 110-217 7-125 (259)
462 2bd0_A Sepiapterin reductase; 25.0 2.1E+02 0.0071 24.5 7.7 101 111-217 4-116 (244)
463 2v9d_A YAGE; dihydrodipicolini 24.9 1.5E+02 0.0051 27.7 6.9 56 168-226 46-104 (343)
464 2qq5_A DHRS1, dehydrogenase/re 24.8 1.9E+02 0.0063 25.3 7.4 82 110-198 6-91 (260)
465 3ew7_A LMO0794 protein; Q8Y8U8 24.5 1.5E+02 0.0052 24.7 6.6 50 112-164 3-52 (221)
466 2hmc_A AGR_L_411P, dihydrodipi 24.5 1.6E+02 0.0053 27.6 6.9 57 168-227 41-97 (344)
467 3qp9_A Type I polyketide synth 24.5 2E+02 0.0069 28.6 8.2 103 107-217 248-372 (525)
468 3cpr_A Dihydrodipicolinate syn 24.5 4E+02 0.014 24.1 10.0 107 87-229 68-178 (304)
469 2yvq_A Carbamoyl-phosphate syn 24.5 2.6E+02 0.009 22.1 7.7 104 111-228 26-131 (143)
470 2ph3_A 3-oxoacyl-[acyl carrier 24.1 3E+02 0.01 23.3 8.6 99 111-216 3-109 (245)
471 3r6d_A NAD-dependent epimerase 24.1 1.8E+02 0.0062 24.5 7.0 30 111-140 7-37 (221)
472 1pjq_A CYSG, siroheme synthase 24.1 1.5E+02 0.005 29.0 7.0 97 107-231 10-107 (457)
473 3ctm_A Carbonyl reductase; alc 24.0 1.6E+02 0.0053 26.0 6.8 82 108-195 33-117 (279)
474 2et6_A (3R)-hydroxyacyl-COA de 23.9 3.5E+02 0.012 27.3 10.0 97 111-217 324-425 (604)
475 2zat_A Dehydrogenase/reductase 23.6 3.6E+02 0.012 23.3 9.2 102 109-217 14-122 (260)
476 3icc_A Putative 3-oxoacyl-(acy 23.4 2.3E+02 0.0078 24.4 7.7 102 109-217 7-121 (255)
477 2e8y_A AMYX protein, pullulana 23.3 26 0.00089 36.7 1.4 26 208-233 315-340 (718)
478 2jl1_A Triphenylmethane reduct 23.3 2.9E+02 0.0098 24.2 8.5 96 111-223 2-99 (287)
479 2ya0_A Putative alkaline amylo 23.3 39 0.0013 35.4 2.7 26 208-233 254-279 (714)
480 2p91_A Enoyl-[acyl-carrier-pro 23.3 3E+02 0.01 24.3 8.6 100 110-217 22-133 (285)
481 2pju_A Propionate catabolism o 23.1 3.7E+02 0.013 23.3 11.0 76 111-199 40-116 (225)
482 3si9_A DHDPS, dihydrodipicolin 23.1 2.1E+02 0.0071 26.3 7.4 58 167-227 36-96 (315)
483 1xu9_A Corticosteroid 11-beta- 22.8 3.9E+02 0.013 23.5 9.3 103 110-217 29-136 (286)
484 1uzm_A 3-oxoacyl-[acyl-carrier 22.7 3.7E+02 0.013 23.1 9.9 95 109-217 15-111 (247)
485 2ag5_A DHRS6, dehydrogenase/re 22.5 3.7E+02 0.012 23.0 9.5 95 110-217 7-104 (246)
486 3dfz_A SIRC, precorrin-2 dehyd 22.3 2.9E+02 0.0098 23.9 7.8 37 107-144 29-65 (223)
487 3a5f_A Dihydrodipicolinate syn 22.1 1.9E+02 0.0067 26.1 7.0 55 168-226 17-74 (291)
488 1xq1_A Putative tropinone redu 22.1 3.3E+02 0.011 23.6 8.5 103 109-217 14-122 (266)
489 3bk2_A RNAse J, metal dependen 22.0 2.3E+02 0.0078 28.4 8.1 79 131-223 337-423 (562)
490 3mje_A AMPHB; rossmann fold, o 22.0 3.1E+02 0.011 26.9 9.0 98 111-216 241-349 (496)
491 3eb2_A Putative dihydrodipicol 22.0 4.2E+02 0.014 24.0 9.3 77 113-216 80-156 (300)
492 2wyu_A Enoyl-[acyl carrier pro 21.7 3E+02 0.01 23.9 8.1 101 109-217 8-120 (261)
493 2ehh_A DHDPS, dihydrodipicolin 21.6 2E+02 0.0067 26.1 6.9 56 168-226 15-73 (294)
494 3na8_A Putative dihydrodipicol 21.6 1.8E+02 0.0061 26.8 6.6 58 167-227 38-98 (315)
495 1g94_A Alpha-amylase; beta-alp 21.5 57 0.002 31.7 3.4 27 207-233 63-89 (448)
496 1hjs_A Beta-1,4-galactanase; 4 21.4 1.9E+02 0.0064 26.8 6.8 36 198-233 49-84 (332)
497 3fkr_A L-2-keto-3-deoxyarabona 21.3 1.1E+02 0.0039 28.0 5.3 57 168-227 23-82 (309)
498 2q5c_A NTRC family transcripti 21.2 3.7E+02 0.013 22.5 12.6 75 114-203 34-108 (196)
499 3oig_A Enoyl-[acyl-carrier-pro 21.1 2.6E+02 0.009 24.3 7.6 85 108-198 6-95 (266)
500 3ic5_A Putative saccharopine d 21.1 2.4E+02 0.0083 20.4 6.6 90 111-226 7-97 (118)
No 1
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.8e-57 Score=461.04 Aligned_cols=431 Identities=71% Similarity=1.197 Sum_probs=351.2
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
|||.++.+..+.+++.|+..|+.+..++|++..+|.++|+|++++|+++.+.+.+++.+......+..++......+..|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~p~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y 82 (435)
T 3piu_A 3 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALF 82 (435)
T ss_dssp ---------------CTTHHHHHHHHSBCBTTTBTTSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHC
T ss_pred ccchhhhhcccccCcchhhHHHHhhcCCCCcccCCCCeEEeccccccccHHHHHHHHHhCcccccccccccccccccccc
Confidence 89999999999999999999999999999999999999999999999999999999888654322211122223345789
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
++..|..+||+++++++++.++.++++++++|++|+|+++++..++.+++++||.|+++.|+|..+...+....|++++.
T Consensus 83 ~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~ 162 (435)
T 3piu_A 83 QDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVP 162 (435)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEE
Confidence 99999999999999999987776677889999999999999999999999999999999999999988777333999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+++++|.+|++.|++.+++....+.++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.|.+.
T Consensus 163 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~- 241 (435)
T 3piu_A 163 IHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP- 241 (435)
T ss_dssp EECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS-
T ss_pred eeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC-
Confidence 9998777788999999999987655566899999999999999999999999999999999999999999998877765
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
.+.++..+..+.....+....+++++++||||+||++|+|+||++++++.+.+.+.+...++.++++.|.++.+++.+.
T Consensus 242 -~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (435)
T 3piu_A 242 -SFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDK 320 (435)
T ss_dssp -CCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHCH
T ss_pred -CCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcCCCCHHHHHHHHHHhcCh
Confidence 5556655544210000000047899999999999999999999999777777777777777778999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
+++.++++++++.++++++.+.+.|++.|+++.++++|+|+|++++............+++..+++++||.|.||..|+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~ 400 (435)
T 3piu_A 321 KLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC 400 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC
Confidence 87677888899999999999999999999999999999999999987544433334557888888777999999999987
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++++||+++..+++++++++++|++++++.+
T Consensus 401 ~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~~~ 433 (435)
T 3piu_A 401 TEPGWFRVCFANLPERTLDLAMQRLKAFVGEYY 433 (435)
T ss_dssp SSTTEEEEECSSSCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHHh
Confidence 778999999986689999999999999998764
No 2
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.1e-54 Score=439.71 Aligned_cols=428 Identities=53% Similarity=1.017 Sum_probs=342.1
Q ss_pred CcccccccccCCCCCccchhhhhhhcCCCCCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccC
Q 037587 1 MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALF 80 (464)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 80 (464)
.||+++.+....+...++..+..+..++|++..++.++|+|+.|+|+++++.+.+++...+....+. ++...+.....|
T Consensus 1 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~Y 79 (428)
T 1iay_A 1 ILSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICS-EGIKSFKAIANF 79 (428)
T ss_dssp CCCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC-----CHHHHHHC
T ss_pred CcccccccccCcccccccchhhhhccCCCCcccCCCceeeeccccchhhHHHHHHHHHhcccccccc-ccccccHhhcCC
Confidence 5899999999888888998898898889999988889999999999999888888887643211000 000112235689
Q ss_pred CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEE
Q 037587 81 QDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVP 160 (464)
Q Consensus 81 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~ 160 (464)
+++.|..+||+++|+++++.+|...++++++|++|+|+++++..++.+++++||.|+++.|+|+++...+....|++++.
T Consensus 80 ~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~ 159 (428)
T 1iay_A 80 QDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIP 159 (428)
T ss_dssp CCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEE
T ss_pred CCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEE
Confidence 98888999999999999988775544778999999999999999999999999999999999999877554334999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++++.+++|.+|++.+++.+++....++++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.|.+.
T Consensus 160 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~- 238 (428)
T 1iay_A 160 IHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP- 238 (428)
T ss_dssp ECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS-
T ss_pred eecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC-
Confidence 9987656788999999999876443445789999999999999999999999999999999999999999998777644
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
.+.++..+..... ......++++++.||||.||++|+|+||++++++.+.+.+.+...++++++++|.++..++++.
T Consensus 239 -~~~~~~~~~~~~~--~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 315 (428)
T 1iay_A 239 -QFVSIAEILDEQE--MTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDE 315 (428)
T ss_dssp -CCCCHHHHHTSGG--GTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTTSCCCHHHHHHHHHHTTCH
T ss_pred -CccCHHHhccccc--cccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhcccCCHHHHHHHHHHhcCh
Confidence 3445555533100 0000147899999999999999999999999666677666666666778999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
+++.+++++.++.++++++++.+.|+++|+++.++++|+|+|++++............+++..+++++||.++||..|+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~ 395 (428)
T 1iay_A 316 KFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFEC 395 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCC
Confidence 75567888899999999999999999989988888788999999976432222223446777777666999999998876
Q ss_pred CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 401 NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 401 ~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++++||+++..+++++++++++|++++++.+
T Consensus 396 ~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 428 (428)
T 1iay_A 396 QEPGWFRVCFANMDDGTVDIALARIRRFVGVEK 428 (428)
T ss_dssp SSSSEEEEECSSSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEecCCHHHHHHHHHHHHHHHhccC
Confidence 556899999986689999999999999987653
No 3
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=3.2e-48 Score=386.82 Aligned_cols=350 Identities=20% Similarity=0.406 Sum_probs=284.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+++++ ++.+.+++.+... .....|++..|..++|+++++++++.++ +.+++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~ 96 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALA------------QGKTKYAPPAGIPELREALAEKFRRENG--LSVTPEETIV 96 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHTTC--CCCCGGGEEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCChHHEEE
Confidence 46799999998775 4556666554311 1234788888899999999999987666 4467899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++.+++.+++++||.|+++.|+|+.+...++.. |++++.++++++++|.+|++++++.+.+ ++++|+
T Consensus 97 t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~ 169 (385)
T 1b5p_A 97 TVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFA-GGVVVEVETLPEEGFVPDPERVRRAITP------RTKALV 169 (385)
T ss_dssp ESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHTTCCT------TEEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHHhcCC------CCEEEE
Confidence 999999999999999999999999999999999888877 9999999997656788999999987753 789999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
+++||||||.++|.+++++|+++|+++|++||+||+|+++.+++. +.++..+ . . +++++++||||+
T Consensus 170 ~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~-~---------~-~~~i~~~s~SK~ 235 (385)
T 1b5p_A 170 VNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE---HFSPGRV-A---------P-EHTLTVNGAAKA 235 (385)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC---CCCGGGT-C---------T-TTEEEEEESTTT
T ss_pred EeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCCHHHc-C---------C-CCEEEEEechhh
Confidence 999999999999999999999999999999999999998766532 2344433 1 2 689999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
||++|+|+||++++ +.+.+.+...... ++++.+.|.++..+++..+...+++++.++.++++++.+.+.|+++|+++
T Consensus 236 ~~~~G~RiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 314 (385)
T 1b5p_A 236 FAMTGWRIGYACGP-KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKA 314 (385)
T ss_dssp TTCGGGCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCB
T ss_pred cCCcccceEEEEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCee
Confidence 99999999999995 4455555444332 35788999999888876211135688889999999999999999889999
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.++++|+|+|++++.. . .+..+++..++ ++||.++||..|+. ++++||+++ .+++++++++++|+++++
T Consensus 315 ~~~~~~~~~~~~~~~~-~----~~~~~l~~~l~-~~gv~v~~g~~f~~--~~~iRis~~-~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 315 VRPSGAFYVLMDTSPI-A----PDEVRAAERLL-EAGVAVVPGTDFAA--FGHVRLSYA-TSEENLRKALERFARVLG 383 (385)
T ss_dssp CCCSBTTEEEEECTTT-C----SSHHHHHHHHH-HTTEECEESGGGTC--TTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred cCCCeeEEEEEecCCC-C----CCHHHHHHHHH-HCCeEEecccccCC--CCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 8999999999998631 1 11235777776 78999999999864 679999999 589999999999987764
No 4
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=4.9e-47 Score=390.53 Aligned_cols=348 Identities=18% Similarity=0.310 Sum_probs=283.3
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChhhhcccCC
Q 037587 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-DPGDAFLLPTPYYPGFDRDLKWRP 154 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~~ 154 (464)
....|++..|..++|+++++++++.+| .++++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...+...
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~- 202 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDG--FPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH- 202 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHS--SCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT-
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcC--CCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc-
Confidence 456899999999999999999988776 45788999999999999999999998 89999999999999999988877
Q ss_pred CcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 155 GVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 155 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
|++++.++++++++|.+|++.|++.+++....+.++++|+++|||||||.++|.+++++|+++|+++|+++|+||+|.++
T Consensus 203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~ 282 (500)
T 3tcm_A 203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN 282 (500)
T ss_dssp TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 99999999998888999999999999876555668999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEe---cCHHHHHHHHHhc-ccCCCChHH
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYS---NNERVVSAATKMS-SFGLVSSQT 309 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~---~~~~~~~~~~~~~-~~~~~s~~~ 309 (464)
.|++. ..+.++..+..+++. .....++++++||||.| |++|+|+||+++ +++ +.+.+.+.. ...+.+.+.
T Consensus 283 ~~~~~-~~~~s~~~~~~~~~~---~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~ 357 (500)
T 3tcm_A 283 IYVDN-KKFHSFKKIVRSLGY---GEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAP-VREQIYKIASVNLCSNITG 357 (500)
T ss_dssp BCCTT-CCCCCHHHHHHHTTC---SSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTT-HHHHHHHHHHTTCCCCHHH
T ss_pred ccCCC-CCCCcHHHHHHHhcc---ccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHH-HHHHHHHHHhcccCCCHHH
Confidence 88542 134566555443210 01224689999999999 899999999987 444 444444433 345578899
Q ss_pred HHHHHHHcCCch--------hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecC--ccc-c---cCCh
Q 037587 310 QYLLSRMLSDKK--------FTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMR--HLL-V---SNTF 374 (464)
Q Consensus 310 q~~~~~~l~~~~--------~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~--~~~-~---~~~~ 374 (464)
|.++..++..+. + .++.++.++.++++++.+.+.|+++ |+++.++++|+|+|+++. ... . ....
T Consensus 358 q~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~ 436 (500)
T 3tcm_A 358 QILASLVMNPPKASDESYASY-KAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANK 436 (500)
T ss_dssp HHHHHHHHSCCCSSSTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCHHHHHHHHHHTS
T ss_pred HHHHHHHhcCccccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCchhhHHHHHhcCC
Confidence 999999998532 3 4567778889999999999999998 999999999999996553 210 0 0011
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..+..++..+++++||.++||+.|+. .+.++|||+++ .+++++++++++|++++++..
T Consensus 437 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 437 APDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp CHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHH
Confidence 12334567788889999999999985 45678999999 689999999999999987653
No 5
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4.3e-47 Score=379.64 Aligned_cols=346 Identities=16% Similarity=0.162 Sum_probs=269.2
Q ss_pred CceEEeecccc------cccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN------QLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|+|++++. +.+++.+.++.. .... -.....|.+..|.++||+++++++.+..+ ..+++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~ 95 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTE----------NYKEKPYLLGNGTEDFSTLTQNLIFGNNS--KYIED 95 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHH----------HCCCCCCCTTSSCHHHHHHHHHHHHCSSC--TTTTT
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcC----------CCCCCCCCCCCCcHHHHHHHHHHHcCCCC--ccccc
Confidence 47899999962 223566776654 3100 13456899999999999999999965433 23456
Q ss_pred Cc--EEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NK--LVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~--i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++ +++|+|+++++.+++.+++. | |+|++++|+|+.|...++.. |++++.+|+..+++|.+|++.|++.+.+
T Consensus 96 ~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 170 (405)
T 3k7y_A 96 KKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESR-GFNLKYINFFDYNLIDINYDLFLNDLRN--- 170 (405)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTT-TCEEEEECCEETTTTEECHHHHHHHHHH---
T ss_pred cceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHc-CCeEEEEeccccccCCcCHHHHHHHHHh---
Confidence 64 59999999999999999987 8 99999999999999998877 9999999984345789999999999875
Q ss_pred cCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 186 LNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 186 ~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
.++.+++++++| |||||.++|.+++++|+++|+++++++|+||+|.++.+++......++..+.. ..++
T Consensus 171 -~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~---------~~~~ 240 (405)
T 3k7y_A 171 -IPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEE---------KNIA 240 (405)
T ss_dssp -SCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHT---------TTCC
T ss_pred -CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHh---------cCCc
Confidence 124567777665 99999999999999999999999999999999999876532101223333333 2378
Q ss_pred EEEEcCCCcCCCCCccEEEEEEe--cCHHHHHHH----HHh--cccCCCChHHHHHHHHHcCCchhh---HHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYS--NNERVVSAA----TKM--SSFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRKR 333 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~--~~~~~~~~~----~~~--~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~ 333 (464)
+++++||||+||++|+|+||+++ +++.+.+.+ ... ..+...+.+.|.++..++.++.+. .+++++.++.
T Consensus 241 ~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~ 320 (405)
T 3k7y_A 241 FSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR 320 (405)
T ss_dssp EEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 455443322 222 233445678999999999886432 4556777888
Q ss_pred HHHHHHHHHHHHH----hCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCe
Q 037587 334 LRKRKEMLVSGLK----VAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGW 405 (464)
Q Consensus 334 ~~~~~~~l~~~l~----~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~ 405 (464)
++++|+.+.+.|+ ++| +++.++++|||+|++++. +++.+| +++||.+.||.
T Consensus 321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~-----------~~~~~L-~~~gV~v~p~~--------- 379 (405)
T 3k7y_A 321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA-----------KIAEHL-KTHHIYIINNG--------- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG-----------GGTTTT-TTTTEECCTTS---------
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH-----------HHHHHH-HHCCEeecCCC---------
Confidence 9999999999999 776 578889999999998864 134556 78999999852
Q ss_pred EEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 406 FRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 406 ~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
|||++.++++++++++++|+++++.
T Consensus 380 -Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 -RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 9999878899999999999998864
No 6
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=3e-46 Score=373.63 Aligned_cols=353 Identities=17% Similarity=0.282 Sum_probs=288.0
Q ss_pred CCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CCCC
Q 037587 33 HNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK-FDPN 110 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~ 110 (464)
....++|||+.|+++++ ++.+.+++.+. ......|++..|..++|+++++++.+.++ ++ ++++
T Consensus 27 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~ 91 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPKHPTPKVITDALTAS-------------LHELEKYPLTAGLPELRQACANWLKRRYD--GLTVDAD 91 (396)
T ss_dssp CTTCCCEECSCCSCCSCCCHHHHHHHHHT-------------GGGGGSCCCTTCCHHHHHHHHHHHHHHTT--TCCCCTT
T ss_pred ccCCCeEEeCCcCCCCCCCHHHHHHHHHH-------------hhhccCCCCCCCcHHHHHHHHHHHHHhcC--CCCCCCC
Confidence 34567899999999886 46677776664 23457899888999999999999988776 33 5688
Q ss_pred -cEEEeCChHHHHHHHHHHhcCCC-----CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 111 -KLVLTAGSTAANETLMFCLADPG-----DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 111 -~i~it~G~~~al~~~~~~l~~~g-----d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
+|++|+|+++++..++.+++++| |.|+++.|+|..+...+... |++++.++++ +++|.+|++.+++++.+
T Consensus 92 ~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~g~~~d~~~l~~~~~~-- 167 (396)
T 3jtx_A 92 NEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLG-GGEIHFANCP-APSFNPDWRSISEEVWK-- 167 (396)
T ss_dssp TSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHT-TCEEEEEECC-TTTCCCCGGGSCHHHHH--
T ss_pred CeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHc-CCEEEEeecC-CCCCccCHHHHHHhhcc--
Confidence 99999999999999999999997 79999999999998888777 9999999984 46788999999999876
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.+.......+ +...++
T Consensus 168 ----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~ 236 (396)
T 3jtx_A 168 ----RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN--KPLGCLQAAAQL-----GRSRQK 236 (396)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC--CCCCHHHHHHHT-----TCCCTT
T ss_pred ----CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCchHHhhhhhc-----ccccCc
Confidence 899999999999999999999999999999999999999999998777653 223333222111 012478
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
+++++||||.||++|+|+||++++ +.+.+.+..... .++++++.|.++..++++.+ ++++.++.++++++.+.
T Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~ 311 (396)
T 3jtx_A 237 LLMFTSLSKRSNVPGLRSGFVAGD-AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQ----HVIDNRRLYQEKFERVI 311 (396)
T ss_dssp EEEEEESTTTSSCGGGCCEEEEEC-HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccCCcccceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984 455555544332 24578899999999988644 47888889999999999
Q ss_pred HHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC------CCCCeEEEEeecCCHH
Q 037587 343 SGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC------NEPGWFRICFANITEE 416 (464)
Q Consensus 343 ~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~------~~~~~~Ris~~~~~~e 416 (464)
+.|.+. +.+..+++|+|+|++++.. ...+++..+++++||.+.||..|+. ...+++||+++. +++
T Consensus 312 ~~l~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~ 382 (396)
T 3jtx_A 312 PILQQV-FDVKLPDASFYIWLKVPDG-------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVA 382 (396)
T ss_dssp HHHTTT-SCCCCCSSSSEEEEECTTS-------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHH
T ss_pred HHHHhc-CCccCCCeeEEEEEECCCC-------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHH
Confidence 999876 5667788899999999851 1235778887788999999998875 246899999986 999
Q ss_pred HHHHHHHHHHHHH
Q 037587 417 TLQVALQRIKVFA 429 (464)
Q Consensus 417 ~l~~~l~~l~~~l 429 (464)
++++++++|++++
T Consensus 383 ~i~~~l~~l~~~l 395 (396)
T 3jtx_A 383 TCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 7
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=8.1e-46 Score=376.53 Aligned_cols=359 Identities=18% Similarity=0.303 Sum_probs=288.0
Q ss_pred CceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 36 SGIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
+++|+|+.+.+.. +++.+.+++.+..... ......|++..|..+||++|++++.+.+| ++ ++++|
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~---------~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~-~~~~v 143 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKY---------ADKALQYGTTKGFTPLRETLMKWLGKRYG--IS-QDNDI 143 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHS---------HHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CC-TTSEE
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhh---------hHHHhCCCCCCCcHHHHHHHHHHHHHhcC--cC-ChhhE
Confidence 4689998875432 5666777666542210 01245798888999999999999977666 33 78899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||.|+++.|+|.++...+... |++++.++++++ .+|+++|++.++.....+.++++
T Consensus 144 ~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~ 219 (448)
T 3aow_A 144 MITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFY-EPQYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKV 219 (448)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeE
Confidence 99999999999999999999999999999999999888876 999999998753 38999999988621112237888
Q ss_pred E-EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 193 V-LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 193 v-il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
| ++++|+||||.++|.+++++|+++|+++|++||+||+|.++.|++. .+.++..+. ..+++++++||
T Consensus 220 v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~--~~~~~~~~~----------~~~~vi~~~S~ 287 (448)
T 3aow_A 220 VYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN--PEKKIKALD----------NEGRVIYLGTF 287 (448)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC--CCCCTGGGC----------TTSCEEEEEES
T ss_pred EEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHhcC----------CCCCEEEEccc
Confidence 7 4689999999999999999999999999999999999999877654 344554441 23689999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
||+|| +|+|+||++++ +.+.+.+..... .+++++++|.++..+|++..+ .+++++.++.++++++.+.+.|++.
T Consensus 288 SK~~~-~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 364 (448)
T 3aow_A 288 SKILA-PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYL-EKHIPEIRKFYKPRRDAMLEALEEFM 364 (448)
T ss_dssp TTTTC-GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHH-HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhcc-ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999 99999999996 455555544322 245688999999999987654 6788999999999999999999885
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETLQVALQR 424 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~l~~ 424 (464)
|+.+..+.+|+|+|++++...+ ..+++..++++ ||.+.||..|+.. .++++||+++..+++++++++++
T Consensus 365 ~~g~~~~~p~~g~~~~v~~~~~~~------~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~ 437 (448)
T 3aow_A 365 PEGVKWTKPEGGMFIWVTLPDGID------SKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKR 437 (448)
T ss_dssp CTTCEECCCSBSSEEEEECSTTCC------HHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHH
T ss_pred CCCeEEeCCCccEEEEEEcCCCCC------HHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 7888888889999999975321 23577777654 9999999988653 46799999987678999999999
Q ss_pred HHHHHHhh
Q 037587 425 IKVFAQSC 432 (464)
Q Consensus 425 l~~~l~~~ 432 (464)
|++++++.
T Consensus 438 L~~~l~~~ 445 (448)
T 3aow_A 438 LAETIKEE 445 (448)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 8
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=4.5e-46 Score=371.54 Aligned_cols=358 Identities=20% Similarity=0.404 Sum_probs=291.6
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc-EE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK-LV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-i~ 113 (464)
.++|+|+.+.++++ ++.+.+++.+... .....|++..|..++|+++++++.+.+| +++++++ |+
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~ 91 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALD------------KGLTHYGPNIGLLELREAIAEKLKKQNG--IEADPKTEIM 91 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHh------------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCCeEE
Confidence 46799999998764 4666666655421 1134688878899999999999987766 3457889 99
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|++++|+|+++...+... |++++.++++++++|.+|++.+++.+++ ++++|
T Consensus 92 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v 164 (389)
T 1gd9_A 92 VLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILA-GGKPVEVPTYEEDEFRLNVDELKKYVTD------KTRAL 164 (389)
T ss_dssp EESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHH-TCEEEEEECCGGGTTCCCHHHHHHHCCT------TEEEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCCccCCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999999888877 9999999987545688999999988754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. ...++..+.. ..+++++++||||
T Consensus 165 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~s~sK 233 (389)
T 1gd9_A 165 IINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA--RHYSIASLDG---------MFERTITVNGFSK 233 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTT---------CGGGEEEEEESTT
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CCCCHhhccC---------CCCCEEEEecChh
Confidence 9999999999999999999999999999999999999998766543 2334444311 1368999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.+|++|+|+||++++ +.+.+.+..... .++++++.|.++..+++.... .+++++.++.++++++.+.+.|+++|++
T Consensus 234 ~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 311 (389)
T 1gd9_A 234 TFAMTGWRLGFVAAP-SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERS-WKAVEEMRKEYDRRRKLVWKRLNEMGLP 311 (389)
T ss_dssp TTTCGGGCCEEEECC-HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCcccceEEEEEC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 999999999999995 455555554433 245788999999999987432 3368888999999999999999998998
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++++|+|+|++++... .+..+++..+++++||.+.||..|+...++++||+++. +++++++++++|++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 312 TVKPKGAFYIFPRIRDTG-----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp CCCCCBTTEECCBCGGGT-----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHH
T ss_pred ecCCCeeeEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 888889999999987410 01235777776578999999998875557899999996 899999999999999876
Q ss_pred hC
Q 037587 432 CN 433 (464)
Q Consensus 432 ~~ 433 (464)
.+
T Consensus 386 ~~ 387 (389)
T 1gd9_A 386 RK 387 (389)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 9
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-46 Score=378.10 Aligned_cols=361 Identities=20% Similarity=0.304 Sum_probs=287.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i 112 (464)
+.++|||+.+.++++ ++.+.+++.+.... .....|++..|..++|+++|+++.+.+| +++++ ++|
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~~~~~~g--~~~~~~~~v 102 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQR-----------EDTHGYSTSRGIPRLRRAISHWYRDRYD--VQIDPESEA 102 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC--------------------CTTCCHHHHHHHHHHHHHHHC--CCCCTTTSE
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCCcCE
Confidence 456899999998764 56677766654211 1245788778899999999999987766 34567 799
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||.|+++.|+|+++...+... |++++.++++++++|.+|++.+++.+.. ++++
T Consensus 103 ~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~ 175 (412)
T 2x5d_A 103 IVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIA-GAQVRSVPLVPGIDFFNELERAIRESIP------KPRM 175 (412)
T ss_dssp EEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHH-TCEEEEEECSTTSCHHHHHHHHHHTEES------CCSE
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeecCCccCCCCCHHHHHHhccc------CceE
Confidence 99999999999999999999999999999999998888876 9999999988655677888888887642 7889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. ..+++++++|||
T Consensus 176 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~---------~~~~~i~~~s~s 244 (412)
T 2x5d_A 176 MILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGW--KAPSIMQVPG---------AKDIAVEFFTLS 244 (412)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTT---------GGGTEEEEEECC
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCChhhccC---------ccCcEEEEecCc
Confidence 99999999999999999999999999999999999999998776543 3344444411 136899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||++|+|+||++++ +.+.+.+..... .++++++.|.++..+++.. .+++++.++.++++++.+.+.|+++|+
T Consensus 245 K~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~ 320 (412)
T 2x5d_A 245 KSYNMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGD---QQCVRDIARQYQQRRDVLVKGLREAGW 320 (412)
T ss_dssp -CCSCTTSCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCCcccceEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999994 455555544332 3567889999999888763 245788888899999999999998899
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++.++++|+|+|++++..... .+..+++..+++++||.++||..|+...++++||+++. +++++++++++|+++++
T Consensus 321 ~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 321 MVENPKASMYVWAKIPEPYAH---LGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp CCCCCSBSSEEEEECCTTTGG---GCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHH
T ss_pred EecCCCeeeEEEEEcCCccCC---CCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 888888999999999743210 02335778877778999999998875557899999996 89999999999999998
Q ss_pred hhCc
Q 037587 431 SCNP 434 (464)
Q Consensus 431 ~~~~ 434 (464)
+...
T Consensus 397 ~~~~ 400 (412)
T 2x5d_A 397 ADGL 400 (412)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 8664
No 10
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=3.8e-46 Score=374.30 Aligned_cols=353 Identities=21% Similarity=0.307 Sum_probs=288.4
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~ 113 (464)
.++|||+.+.++++ ++.+.+++.+.... .....|++..|..++|+++|+++.+.+| +++++ ++|+
T Consensus 47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~~v~ 113 (404)
T 2o1b_A 47 LPLINMAVGIPDGPTPQGIIDHFQKALTI-----------PENQKYGAFHGKEAFKQAIVDFYQRQYN--VTLDKEDEVC 113 (404)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTC-----------HHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCEEecCCcCCCCCCCHHHHHHHHHHHhC-----------CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCcccEE
Confidence 45899999998874 46677766654211 1245788877899999999999987766 33555 7999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.+++++ ++|.+|+++|++.+.. ++++|
T Consensus 114 ~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v 185 (404)
T 2o1b_A 114 ILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLA-DGKPVPLNLEP-PHYLPDWSKVDSQIID------KTKLI 185 (404)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHT-TCEEEEEECCT-TTCCCCGGGSCHHHHH------HEEEE
T ss_pred EcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHC-CCEEEEeccCc-ccCcCCHHHHHHhhcc------CceEE
Confidence 9999999999999999999999999999999999888877 99999999875 5678899999998865 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.. ..+++++++||||
T Consensus 186 ~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~---------~~~~~i~~~s~sK 253 (404)
T 2o1b_A 186 YLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK---NPSILASEN---------GKDVAIEIYSLSK 253 (404)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC---CCCGGGSTT---------HHHHEEEEEESTT
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCC---------CCCCEEEEEecch
Confidence 9999999999999999999999999999999999999998766442 234333321 1267899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.||++|+|+||++++ +.+.+.+..... .++++.+.|.++..++++. .+++++.++.++++++.+.+.|+++|+.
T Consensus 254 ~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 329 (404)
T 2o1b_A 254 GYNMSGFRVGFAVGN-KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY---DDFLEEQSNVFKTRRDRFEAMLAKADLP 329 (404)
T ss_dssp TTTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hccCchhheEeEecC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 999999999999984 455555544332 2457889999998888763 4567888899999999999999998999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++++|+|+|++++...+ ..+++..+++++||.++||..|+...++++||+++. +++++++++++|++++++
T Consensus 330 ~~~~~~g~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 330 FVHAKGGIYVWLETPPGYD------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp EECCCBSSEEEEECCTTCC------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGG
T ss_pred ecCCCcceEEEEeCCCCCC------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 8888999999999974221 235777877678999999998875457899999996 889999999999998866
Q ss_pred h
Q 037587 432 C 432 (464)
Q Consensus 432 ~ 432 (464)
+
T Consensus 403 ~ 403 (404)
T 2o1b_A 403 Y 403 (404)
T ss_dssp G
T ss_pred h
Confidence 4
No 11
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-46 Score=381.08 Aligned_cols=359 Identities=20% Similarity=0.307 Sum_probs=288.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.+.+.++ ++.+.+++.+.... .....|++..|.++||+++++++.+.+| .++++++|+
T Consensus 56 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~g--~~~~~~~v~ 122 (447)
T 3b46_A 56 GRELINLGQGFFSYSPPQFAIKEAQKALDI-----------PMVNQYSPTRGRPSLINSLIKLYSPIYN--TELKAENVT 122 (447)
T ss_dssp TSCCEECCCCSCSSCCCHHHHHHHHHHTTS-----------GGGGSCCCTTCCHHHHHHHHHHHTTTTT--SCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhC-----------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 457899999987664 46677766654210 1246798888999999999999987665 346778999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCC----------CcccCHHHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSN----------GFRITISALENAYQQA 183 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~----------~~~~d~~~l~~~i~~~ 183 (464)
+|+|+++++..++.+++++||+|++++|+|+.+...+... |.+++.+++++++ +|.+|++.|++.+..
T Consensus 123 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~- 200 (447)
T 3b46_A 123 VTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELC-GGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS- 200 (447)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT-
T ss_pred EeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc-
Confidence 9999999999999999999999999999999999988877 9999999987543 578999999987753
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhh-hhccCcCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEA-VMDRNIDESDDLW 262 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~ 262 (464)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.|++. +.++..+ .. ..
T Consensus 201 -----~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~~---------~~ 263 (447)
T 3b46_A 201 -----KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS---FTRIATLSPE---------IG 263 (447)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC---CCCGGGSCHH---------HH
T ss_pred -----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCC---CcCHHHcCCC---------CC
Confidence 789999999999999999999999999999999999999999998777643 2343333 11 12
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEM 340 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (464)
++++++.|+||.||++|+|+||+++.++.+.+.+.... ..++.+++.|.++..+|+.... .+++++.++.++++++.
T Consensus 264 ~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~-~~~~~~~~~~~~~~~~~ 342 (447)
T 3b46_A 264 QLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALK-IGYFEKMRQEYINKFKI 342 (447)
T ss_dssp TTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcc-hHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999993444545444322 2345788999998888876533 55688889999999999
Q ss_pred HHHHHHhCCCeeecCCccEEEEEecCcccccCC---------hhHHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeE
Q 037587 341 LVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNT---------FEAEKELWKKIIFEVGLNISPGSSCHCN-----EPGWF 406 (464)
Q Consensus 341 l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~---------~~~~~~l~~~ll~~~gI~v~pg~~f~~~-----~~~~~ 406 (464)
+.+.|+++|+++..+++|+|+|++++....... .....+++..+++++||.+.||+.|+.. ..+++
T Consensus 343 l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~i 422 (447)
T 3b46_A 343 FTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLL 422 (447)
T ss_dssp HHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEE
T ss_pred HHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEE
Confidence 999999999998888999999999975310000 0234467888887789999999988642 26799
Q ss_pred EEEeecCCHHHHHHHHHHHHH
Q 037587 407 RICFANITEETLQVALQRIKV 427 (464)
Q Consensus 407 Ris~~~~~~e~l~~~l~~l~~ 427 (464)
||+++. +++++++++++|++
T Consensus 423 Rls~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 423 RFAVCK-DDAYLENAVERLKL 442 (447)
T ss_dssp EEECCS-CHHHHHHHHHHGGG
T ss_pred EEEEeC-CHHHHHHHHHHHHH
Confidence 999995 89999999999987
No 12
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=3.2e-46 Score=375.16 Aligned_cols=359 Identities=21% Similarity=0.331 Sum_probs=291.1
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i 112 (464)
..++|+|+.+.+.++ ++.+.+++.+.... .....|++..|..++|+++++++++.++ .++++ ++|
T Consensus 22 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~la~~~~~~~~--~~~~~~~~i 88 (410)
T 3e2y_A 22 DPSVVNLGQGFPDISPPSYVKEELSKAAFI-----------DNMNQYTRGFGHPALVKALSCLYGKIYQ--RQIDPNEEI 88 (410)
T ss_dssp STTSEECSSCCCCSCCCHHHHHHHHHHHTC-----------GGGGSCCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTSE
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhC-----------ccccCCCCCCChHHHHHHHHHHHHHHhC--CCCCCCCCE
Confidence 357899999998875 56677776664211 2356899888899999999999998877 44677 899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC---------CCCcccCHHHHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS---------SNGFRITISALENAYQQA 183 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~---------~~~~~~d~~~l~~~i~~~ 183 (464)
++|+|+++++..++.+++++||.|+++.|+|..+...+... |.+++.+++++ +.+|.+|++++++.+.+
T Consensus 89 ~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~- 166 (410)
T 3e2y_A 89 LVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMA-GAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS- 166 (410)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT-
T ss_pred EEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEeccccccccccccccCCcCCHHHHHhhcCC-
Confidence 99999999999999999999999999999999999888877 99999998762 24677899999987753
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. ..+
T Consensus 167 -----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~---------~~~ 230 (410)
T 3e2y_A 167 -----KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIATLPG---------MWE 230 (410)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTT---------CGG
T ss_pred -----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHHcCC---------ccC
Confidence 789999999999999999999999999999999999999999998877654 4445554432 347
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCC-----chhhHHHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSD-----KKFTCNYMKENRKRLRK 336 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~ 336 (464)
++++++||||.||++|+|+||++++++ +.+.+.... ..++++++.|.++..++.+ ..+ .+++++.++.+++
T Consensus 231 ~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 308 (410)
T 3e2y_A 231 RTITIGSAGKTFSVTGWKLGWSIGPAH-LIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP-ECYFNSLPKELEV 308 (410)
T ss_dssp GEEEEEEHHHHSSCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHH
T ss_pred eEEEEecchhhcCCCCceEEEEEECHH-HHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccch-HHHHHHHHHHHHH
Confidence 899999999999999999999999554 444444433 2455788999998888863 112 4457888899999
Q ss_pred HHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCC-----hhHHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeE
Q 037587 337 RKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNT-----FEAEKELWKKIIFEVGLNISPGSSCHCN-----EPGWF 406 (464)
Q Consensus 337 ~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~-----~~~~~~l~~~ll~~~gI~v~pg~~f~~~-----~~~~~ 406 (464)
+++.+.+.|+++|+.+..+++|+|+|++++....... .....+++..+++++||.+.||+.|+.. ..+++
T Consensus 309 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~i 388 (410)
T 3e2y_A 309 KRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLV 388 (410)
T ss_dssp HHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEE
T ss_pred HHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEE
Confidence 9999999999999999899999999999975322110 0123357788888889999999988643 35899
Q ss_pred EEEeecCCHHHHHHHHHHHHH
Q 037587 407 RICFANITEETLQVALQRIKV 427 (464)
Q Consensus 407 Ris~~~~~~e~l~~~l~~l~~ 427 (464)
||+++. +++++++++++|++
T Consensus 389 Ris~~~-~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 389 RFCFIK-KDSTLDAAEEIFRA 408 (410)
T ss_dssp EEECCC-CHHHHHHHHHHHHT
T ss_pred EEEEcC-CHHHHHHHHHHHHh
Confidence 999986 99999999999875
No 13
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.4e-46 Score=377.58 Aligned_cols=363 Identities=19% Similarity=0.354 Sum_probs=294.5
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+.... ......|++..|..++|+++++++++.++ .++++ ++|+
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~----------~~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~~i~ 95 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSG----------DFMLNQYTKTFGYPPLTKILASFFGELLG--QEIDPLRNVL 95 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHS----------CGGGGSCCCTTCCHHHHHHHHHHHHHHHT--CCCCHHHHEE
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhC----------CCccCCCCCCCCCHHHHHHHHHHHHHhhC--CCCCCCCcEE
Confidence 47899999998874 56677776664221 01246899888999999999999998877 44667 6999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC----------CCCcccCHHHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS----------SNGFRITISALENAYQQA 183 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~----------~~~~~~d~~~l~~~i~~~ 183 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |.+++.+++++ .++|.+|++.+++.+++
T Consensus 96 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~- 173 (422)
T 3fvs_A 96 VTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMA-GGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTS- 173 (422)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCT-
T ss_pred EECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHc-CCEEEEEecccccccccccccccCCCCCHHHHHhhcCC-
Confidence 9999999999999999999999999999999999888877 99999999875 23678999999988753
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. ..+
T Consensus 174 -----~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~---------~~~ 237 (422)
T 3fvs_A 174 -----RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISIASLPG---------MWE 237 (422)
T ss_dssp -----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTT---------TGG
T ss_pred -----CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCChhhccc---------ccC
Confidence 789999999999999999999999999999999999999999998877654 3445554422 337
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCC-----chhhHHHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSD-----KKFTCNYMKENRKRLRK 336 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~ 336 (464)
++++++||||.||++|+|+||++++++ +.+.+.... ..++++++.|.++..++.+ ..+ .+++++.++.+++
T Consensus 238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 315 (422)
T 3fvs_A 238 RTLTIGSAGKTFSATGWKVGWVLGPDH-IMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQP-SSYFVQFPQAMQR 315 (422)
T ss_dssp GEEEEEEHHHHHTCGGGCCEEEECCHH-HHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCT-TCHHHHHHHHHHH
T ss_pred cEEEEecchhccCCccceEEEEEeCHH-HHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccch-HHHHHHHHHHHHH
Confidence 899999999999999999999999554 444444432 2445788999998888864 112 4567888999999
Q ss_pred HHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-C------ChhHHHHHHHHHHHhcCeEEeCCCCCCC-----CCCC
Q 037587 337 RKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-N------TFEAEKELWKKIIFEVGLNISPGSSCHC-----NEPG 404 (464)
Q Consensus 337 ~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-~------~~~~~~~l~~~ll~~~gI~v~pg~~f~~-----~~~~ 404 (464)
+++.+.+.|+++|+.+..+++|+|+|++++..... . ......+++..+++++||.+.||+.|+. ...+
T Consensus 316 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~ 395 (422)
T 3fvs_A 316 CRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH 395 (422)
T ss_dssp HHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred HHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence 99999999999999988899999999998752110 0 0001336788888888999999998863 3478
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 405 WFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 405 ~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++||+++. +++++++++++|++++++
T Consensus 396 ~iRis~~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 396 YIRFCFVK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred eEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 99999996 999999999999998864
No 14
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.1e-45 Score=373.67 Aligned_cols=360 Identities=18% Similarity=0.340 Sum_probs=292.4
Q ss_pred CCceEEeeccccc-----ccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 35 PSGIIQMGLAENQ-----LSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 35 ~~~~i~l~~~~n~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
..++|+|+.+.+. .+++.+.+++.+.... .....|++..|..++|+++++++++. + .++++
T Consensus 53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~-~--~~~~~ 118 (427)
T 3dyd_A 53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDS-----------GKYNGYAPSIGFLSSREEIASYYHCP-E--APLEA 118 (427)
T ss_dssp TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHH-----------CCSSSCCCTTCCHHHHHHHHHHHCBT-T--BCCCG
T ss_pred CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhc-----------CcCCCCCCCCCcHHHHHHHHHHHhhc-C--CCCCh
Confidence 3468999998743 3457777777664221 23457988889999999999999753 2 44678
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.++++++++|.+|++.+++.+++ +
T Consensus 119 ~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 191 (427)
T 3dyd_A 119 KDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESM-GIEVKLYNLLPEKSWEIDLKQLEYLIDE------K 191 (427)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHSSCCT------T
T ss_pred HHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecccccCCCCCHHHHHHHhcc------C
Confidence 99999999999999999999999999999999999998888877 9999999987667888999999988754 7
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+. ...++++++
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~--~~~~~~~~~----------~~~~vi~~~ 259 (427)
T 3dyd_A 192 TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDC--KYEPLATLS----------TDVPILSCG 259 (427)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSC--CCCCGGGGC----------SSCCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCC--cCccHHHhC----------CCCcEEEEe
Confidence 88999999999999999999999999999999999999999999877655 444544442 225689999
Q ss_pred CCCcCCCCCccEEEEEEecC------HHHHHHHHHhc-ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNN------ERVVSAATKMS-SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~------~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
||||.||++|+|+||+++++ +.+.+.+.... ..++.+++.|.++..+|++.. .+++++.++.++++++.+.
T Consensus 260 S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~--~~~~~~~~~~~~~~~~~l~ 337 (427)
T 3dyd_A 260 GLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRTP--GEFYHNTLSFLKSNADLCY 337 (427)
T ss_dssp ESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHH
T ss_pred eccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999864 34555444432 345688899999999988422 4457788888999999999
Q ss_pred HHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHH
Q 037587 343 SGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVA 421 (464)
Q Consensus 343 ~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~ 421 (464)
+.|+++ |+.+..+++|+|+|+.++...... .....+++..+++++||.+.||..|+. ++++||+++ .++++++++
T Consensus 338 ~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~-~~~~~~~~~~l~~~~gV~v~~g~~~~~--~~~iRis~~-~~~e~i~~~ 413 (427)
T 3dyd_A 338 GALAAIPGLRPVRPSGAMYLMVGIEMEHFPE-FENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVIT-VPEVMMLEA 413 (427)
T ss_dssp HHHHHSTTEEEECCSBTTEEEEEECGGGCTT-CSSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEESC-SCHHHHHHH
T ss_pred HHHhcCCCceecCCCeeEEEEEecCHhhcCC-CCCHHHHHHHHHHHCCEEEECCcccCC--CCeEEEEEC-CCHHHHHHH
Confidence 999998 888888899999999887321111 112345788888788999999998863 689999998 599999999
Q ss_pred HHHHHHHHHhhC
Q 037587 422 LQRIKVFAQSCN 433 (464)
Q Consensus 422 l~~l~~~l~~~~ 433 (464)
+++|++++++++
T Consensus 414 l~~l~~~l~~~~ 425 (427)
T 3dyd_A 414 CSRIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999998765
No 15
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.3e-45 Score=366.53 Aligned_cols=350 Identities=18% Similarity=0.262 Sum_probs=291.4
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
.+.++|||+.++|+++ ++.+.+++.+... .....|++ .| .++|+++++++++.++ .++++++|
T Consensus 21 ~g~~~idl~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~-~~-~~lr~~la~~~~~~~~--~~~~~~~i 84 (377)
T 3fdb_A 21 YGQGVLPLWVAESDFSTCPAVLQAITDAVQ------------REAFGYQP-DG-SLLSQATAEFYADRYG--YQARPEWI 84 (377)
T ss_dssp SCTTSEECCSSCCCSCCCHHHHHHHHHHHH------------TTCCSSCC-SS-CCHHHHHHHHHHHHHC--CCCCGGGE
T ss_pred cCCCeeeecccCCCCCCCHHHHHHHHHHHH------------cCCCCCCC-CC-HHHHHHHHHHHHHHhC--CCCCHHHE
Confidence 4568899999998885 4667777665421 12457888 77 9999999999998877 44678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++++++ +|++++++.+++ ++++
T Consensus 85 ~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~----~d~~~l~~~l~~------~~~~ 153 (377)
T 3fdb_A 85 FPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSAT-QREGIFIDATGG----INLHDVEKGFQA------GARS 153 (377)
T ss_dssp EEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHH-TCCEEEEECTTS----CCHHHHHHHHHT------TCCE
T ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEEccCCCC----CCHHHHHHHhcc------CCCE
Confidence 99999999999999999999999999999999998888877 999999998753 899999999875 6789
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC-CCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS-PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+ . ...++..+.. .+++++++||
T Consensus 154 v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~--~~~~~~~~~~----------~~~~i~~~s~ 221 (377)
T 3fdb_A 154 ILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQH--TVAAGVSDTA----------ASVCITITAP 221 (377)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCC--CCGGGSCHHH----------HHHEEEEECS
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCC--CcccHHHccC----------CCcEEEEEeC
Confidence 9999999999999999999999999999999999999999877765 3 3344433321 2688999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
||.+|++|+|+||+++.++.+.+.+..... .++++++.|.++..++.+. .+++++.++.++++++.+.+.|++.
T Consensus 222 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 298 (377)
T 3fdb_A 222 SKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYG---TDFLNQEVAYLKNNHDFLLHEIPKRI 298 (377)
T ss_dssp TTTTTCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hHhccCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999998867767666655443 2467889999988888753 4567888899999999999999985
Q ss_pred -CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 349 -GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 349 -g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
|+.+.++++++++|++++...... +++..+++++||.++||..|+...++++||+++. +++++++++++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~ 371 (377)
T 3fdb_A 299 PGAKITPMQATYLMWIDFRDTTIEG------SPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAK 371 (377)
T ss_dssp TTCEECCCSBCSEEEEECTTSCCCS------CHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCceEecCCeeEEEEEECcccCCCH------HHHHHHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHH
Confidence 899999999999999998632112 3677788777999999999986667899999995 89999999999999
Q ss_pred HHHhh
Q 037587 428 FAQSC 432 (464)
Q Consensus 428 ~l~~~ 432 (464)
++++.
T Consensus 372 ~l~~~ 376 (377)
T 3fdb_A 372 AVSHH 376 (377)
T ss_dssp HHTTC
T ss_pred HHhhc
Confidence 98653
No 16
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2e-45 Score=367.27 Aligned_cols=350 Identities=21% Similarity=0.385 Sum_probs=281.1
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|||+.|.++++ ++.+.+++.+... .....|++..|..++|+++++++++.++ +++++++|+
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~v~ 95 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLE------------TDALGYTVALGLPALRQRIARLYGEWYG--VDLDPGRVV 95 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC----------------------CCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCChHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 457899999999886 4656666665321 1235788888899999999999998877 457889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.++++++++|.+|++++++. ++++|
T Consensus 96 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v 165 (391)
T 3h14_A 96 ITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRAL-GLVPVDLPTAPENRLQPVPADFAGL---------DLAGL 165 (391)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECCGGGTTSCCHHHHTTS---------CCSEE
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCcccCCCCCHHHHHhc---------CCeEE
Confidence 9999999999999999999999999999999999888877 9999999998767788999988764 57889
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. . .+...+ .+++++++||||
T Consensus 166 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~-~~~~~~------------~~~~i~~~s~sK 230 (391)
T 3h14_A 166 MVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK--A-VTALEL------------TDECYVINSFSK 230 (391)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC--C-CCGGGT------------CSSSEEEEESSS
T ss_pred EECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC--C-cChhhc------------CCCEEEEEechh
Confidence 9999999999999999999999999999999999999998777654 1 232222 268899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.+|++|+|+||++++++ +.+.+..... .++++.+.|.++.+++.. .+++++.++.++++++.+.+.|+++++.
T Consensus 231 ~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 305 (391)
T 3h14_A 231 YFSMTGWRVGWMVVPED-QVRVVERIAQNMFICAPHASQVAALAALDC----DAELQANLDVYKANRKLMLERLPKAGFT 305 (391)
T ss_dssp TTCCTTSCCEEEECCGG-GHHHHHHHHHHTTCCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCccceeEEEEeCHH-HHHHHHHHHhhhccCCCHHHHHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999655 4444444332 235778899998888874 4568888899999999999999988765
Q ss_pred e-ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 C-LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~-~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
. .++++++|+|++++... ....+++..+++++||.++||..|+. ..++++||+++. +++++++++++|++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 306 RIAPPDGAFYVYADVSDLT-----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFM 379 (391)
T ss_dssp CBCCCCBTTEEEEECTTTC-----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCccC-----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHH
Confidence 4 57888899999997521 11235778888777999999999986 456799999996 8899999999999999
Q ss_pred HhhCc
Q 037587 430 QSCNP 434 (464)
Q Consensus 430 ~~~~~ 434 (464)
++...
T Consensus 380 ~~~~~ 384 (391)
T 3h14_A 380 QARGE 384 (391)
T ss_dssp HHC--
T ss_pred HHhcc
Confidence 98875
No 17
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.1e-45 Score=371.69 Aligned_cols=364 Identities=21% Similarity=0.299 Sum_probs=290.4
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+.... . ......|++..|..++|+++++++.+.+| .+++++ +|+
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----~----~~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~ 105 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANS-----P----DPLANQYTRGFGHPRLVQALSKLYSQLVD--RTINPMTEVL 105 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTC-----S----CGGGGSCCCSSCCHHHHHHHHHHHHHHHT--SCCCTTTSEE
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhc-----c----ccCccCCCCCCCcHHHHHHHHHHHHHHhC--CCCCCcCCEE
Confidence 46799999988764 46666666654211 0 01346788878899999999999988766 346788 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCC--------CcccCHHHHHHHHHHHhh
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSN--------GFRITISALENAYQQAQT 185 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~--------~~~~d~~~l~~~i~~~~~ 185 (464)
+|+|+++++..++.+++++||.|+++.|+|+++...+... |.+++.+++++++ +|.+|++.|++.+++
T Consensus 106 ~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 181 (429)
T 1yiz_A 106 VTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAA-GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNE--- 181 (429)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCT---
T ss_pred EecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCcccccccccccCcccCHHHHHHHhcc---
Confidence 9999999999999999999999999999999999888876 9999999987643 678999999988753
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. ..+++
T Consensus 182 ---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~---------~~~~~ 247 (429)
T 1yiz_A 182 ---KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF--EHIRICTLPG---------MWERT 247 (429)
T ss_dssp ---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS--CCCCGGGSTT---------TGGGE
T ss_pred ---CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC--CCcChhhccC---------CcCce
Confidence 789999999999999999999999999999999999999999998877654 3344433311 23689
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCC-----chhhHHHHHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSD-----KKFTCNYMKENRKRLRKRK 338 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~ 338 (464)
+++.||||.||++|+|+||++++ +.+.+.+.... ..++.+++.|.++..+|++ ..+ .+++++.++.+++++
T Consensus 248 ~~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 248 ITIGSAGKTFSLTGWKIGWAYGP-EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKR 325 (429)
T ss_dssp EEEEEHHHHHTCGGGCCEEEESC-HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHH
T ss_pred EEEecchhccCCCCcceEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHH
Confidence 99999999999999999999995 44555554432 2345788999998888876 332 456888889999999
Q ss_pred HHHHHHHHhCCCeeecCCccEEEEEecCcccc------cCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-----CCCeEE
Q 037587 339 EMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV------SNTFEAEKELWKKIIFEVGLNISPGSSCHCN-----EPGWFR 407 (464)
Q Consensus 339 ~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~------~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-----~~~~~R 407 (464)
+.+.+.|.++|+.+.++++|+|+|++++.... ........+++..+++++||.+.||..|+.. .++++|
T Consensus 326 ~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iR 405 (429)
T 1yiz_A 326 DYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVR 405 (429)
T ss_dssp HHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEE
T ss_pred HHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEE
Confidence 99999999889998888889999999975310 0000123457777877789999999888642 267999
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHh
Q 037587 408 ICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 408 is~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
|+++. +++++++++++|++++++
T Consensus 406 is~~~-~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 406 YCFFK-KDENLQKAAEILRKWKGS 428 (429)
T ss_dssp EECCS-CHHHHHHHHHHHHHHSCC
T ss_pred EEecC-CHHHHHHHHHHHHHhccC
Confidence 99995 899999999999988643
No 18
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.9e-45 Score=373.21 Aligned_cols=350 Identities=19% Similarity=0.296 Sum_probs=273.9
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC----eEEEcCCCCCChhhhccc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGD----AFLLPTPYYPGFDRDLKW 152 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~ 152 (464)
...|++..|.+++|++|++++++.++ ++++++++|++|+|+++++..++.+++++|| .|+++.|+|+.|...+..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~g-G~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDG-GVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTT-TCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcC-CCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 46799999999999999999988763 2557899999999999999999999999875 999999999999988887
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. |++++.++++++++|.+|+++|++.+++... +.++++|+++|||||||.++|.+++++|+++|++++++||+||+|.
T Consensus 201 ~-g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~ 278 (498)
T 3ihj_A 201 L-DAIQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ 278 (498)
T ss_dssp T-TCEEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred c-CCEEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc
Confidence 7 9999999999877899999999999986421 1258999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEe--cCHHHHHHHHHhc-ccCCCChH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYS--NNERVVSAATKMS-SFGLVSSQ 308 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~--~~~~~~~~~~~~~-~~~~~s~~ 308 (464)
++.|++. ..+.++..+..++... .+...++++++||||+| |++|+|+||++. .++.+.+.+.+.. .....+.+
T Consensus 279 ~~~~~~~-~~~~s~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 355 (498)
T 3ihj_A 279 DNVYSPD-CRFHSFKKVLYEMGPE--YSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVS 355 (498)
T ss_dssp TCBCCTT-CCCCCHHHHHHHTCHH--HHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCCCCHH
T ss_pred ccccCCC-CCcCCHHHHHHHhccc--ccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCCCCHH
Confidence 9888642 1345666654422000 00123589999999999 899999999983 3556666554443 33456789
Q ss_pred HHHHHHHHcCCc-----hh--hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccc------cCCh
Q 037587 309 TQYLLSRMLSDK-----KF--TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLV------SNTF 374 (464)
Q Consensus 309 ~q~~~~~~l~~~-----~~--~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~------~~~~ 374 (464)
.|.++..+++++ .+ ..++.++.++.++++++.+.+.|.++ |+++.++++|+|+|+++..... ....
T Consensus 356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~ 435 (498)
T 3ihj_A 356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQM 435 (498)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHHHhcCC
Confidence 999999999752 22 12334567788999999999999998 9999999999999987642110 0011
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..+..++.++++++||.++||+.|+. .+.++||++++ .+++++++++++|++++++.+
T Consensus 436 ~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 436 APDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp CHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHH
Confidence 22223367788889999999999985 45679999997 689999999999999987654
No 19
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=4.7e-45 Score=364.13 Aligned_cols=359 Identities=18% Similarity=0.243 Sum_probs=294.4
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
...++|||+.+.+.++ ++.+.+++.+... .....|++. ..++++++++++.+.++ .++++++|
T Consensus 25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~i 88 (391)
T 3dzz_A 25 LKEKELPMWIAEMDFKIAPEIMASMEEKLK------------VAAFGYESV--PAEYYKAVADWEEIEHR--ARPKEDWC 88 (391)
T ss_dssp CCTTCEECCSSCCSSCCCHHHHHHHHHHHT------------TCCCCCBCC--CHHHHHHHHHHHHHHHS--CCCCGGGE
T ss_pred cCCCceeccccCCCCCCCHHHHHHHHHHHh------------cCcCCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHE
Confidence 4458999999988775 4667777666421 124567665 59999999999998876 44678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++|+|+++++..++.+++++||+|+++.|+|.++...+... |.+++.++++ .++.|.+|++++++++++ ++++
T Consensus 89 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~ 162 (391)
T 3dzz_A 89 VFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN-GRRVISSDLIYENSKYSVNWADLEEKLAT-----PSVR 162 (391)
T ss_dssp EEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHTS-----TTEE
T ss_pred EECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHHHHHHHc-CCEEEEeeeeecCCceeecHHHHHHHHhc-----cCce
Confidence 99999999999999999999999999999999998888877 9999999986 356688999999999862 3789
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..++++++.|+
T Consensus 163 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~d~~i~~~s~ 232 (391)
T 3dzz_A 163 MMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWD--------AKNWVVSLISP 232 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTT--------TGGGEEEEECS
T ss_pred EEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCcc--------ccCcEEEEEeC
Confidence 999999999999999999999999999999999999999998777654 34454444221 13689999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHh---cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKM---SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
||.+|++|+|+||++++++.+.+.+... ...++.+++.+.++..++... .+++++.++.++++++.+.+.|++.
T Consensus 233 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (391)
T 3dzz_A 233 SKTFNLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG---HDWLRELKQVLRDNFAYAREFLAKE 309 (391)
T ss_dssp HHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999756666655544 234457888888888877653 4567888889999999999999984
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
|+.+.++.+++++|++++.... ...+++..|++++||.++||..|+...++++||+++ .+++++++++++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~ 383 (391)
T 3dzz_A 310 VPEVKVLDSNASYLAWVDISALGM-----NAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA-CPKELVIDGMQRLK 383 (391)
T ss_dssp CTTSEECCCCBSSEEEEECGGGCS-----CHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC-SCHHHHHHHHHHHH
T ss_pred CCCcEEeccCceEEEEEehhhcCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHH
Confidence 8999999999999999975211 123577777667899999999998766789999999 48999999999999
Q ss_pred HHHHhhC
Q 037587 427 VFAQSCN 433 (464)
Q Consensus 427 ~~l~~~~ 433 (464)
+++++.+
T Consensus 384 ~~l~~~~ 390 (391)
T 3dzz_A 384 QGVLNLN 390 (391)
T ss_dssp HHHHTCC
T ss_pred HHHHHhh
Confidence 9998764
No 20
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4e-45 Score=362.91 Aligned_cols=345 Identities=17% Similarity=0.246 Sum_probs=279.6
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
++|||+.|+|+++ ++.+.+++.+. ......|++..|..++|+++++++.+.++ +++++++|++|
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~~t 88 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNH-------------THSLNIYPKSAFEESLRAAQRGFFKRRFK--IELKENELIST 88 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTT-------------GGGGGSCCCTTCCHHHHHHHHHHHHHHHS--CCCCGGGEEEE
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHh-------------hhhcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEEEC
Confidence 8899999999885 46777777664 23456899888999999999999988776 34578999999
Q ss_pred CChHHHHHHHHHHhcCC--CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 116 AGSTAANETLMFCLADP--GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+++++..++.+++++ ||+|+++.|+|..+...+... |.+++.+++++++++.+ ++++.+.+ ++++|
T Consensus 89 ~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~---~l~~~~~~------~~~~v 158 (376)
T 3ezs_A 89 LGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFI-KAKSLLMPLTKENDFTP---SLNEKELQ------EVDLV 158 (376)
T ss_dssp SSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTSCC---CCCHHHHH------HCSEE
T ss_pred cCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHc-CCEEEEcccCCCCCcch---hHHhhhcc------CCCEE
Confidence 99999999999999999 999999999999998888877 99999999876545444 55566654 68899
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. ..++......++ .+..+++++++||||
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~i~~~s~sK 231 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTP---PPSLLEACMLAG----NEAFKNVLVIHSLSK 231 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC---CCCHHHHHHHTT----CTTCTTEEEEEESTT
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC---CCCHHHcccccc----ccccCcEEEEecchh
Confidence 9999999999999999999999999999999999999998776553 234433322000 002378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.+|++|+|+||+++ ++.+.+.+..... .++++++.|.++..++++.++ +++.++.++++++.+.+.|+ ++.
T Consensus 232 ~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~--~~~ 304 (376)
T 3ezs_A 232 RSSAPGLRSGFIAG-DSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRH----AEFFRNIYANNLKLARKIFK--NTL 304 (376)
T ss_dssp TTTCGGGCCEEEEE-CHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHH----HHHHHHHHHHHHHHHHHHST--TCC
T ss_pred ccCCccceeEEEee-CHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHH----HHHHHHHHHHHHHHHHHHhc--CCC
Confidence 99999999999998 4555555554433 345788999999999987543 77888889999999999988 655
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC--CCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH--CNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~--~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.+.+|+|+|++++. ..+++..+++++||.+.||..|+ ...++++||+++. +++++++++++|++++
T Consensus 305 --~~~~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 372 (376)
T 3ezs_A 305 --IYPYSFYVYLPVQN---------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYR 372 (376)
T ss_dssp --CCSBSSEEEEECSC---------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred --CCCcceEEEEECCC---------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHH
Confidence 56788999999971 23577777765899999999987 3457899999985 9999999999999988
Q ss_pred Hhh
Q 037587 430 QSC 432 (464)
Q Consensus 430 ~~~ 432 (464)
+++
T Consensus 373 ~~~ 375 (376)
T 3ezs_A 373 ENH 375 (376)
T ss_dssp CC-
T ss_pred Hhc
Confidence 653
No 21
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=5.2e-45 Score=362.80 Aligned_cols=353 Identities=17% Similarity=0.246 Sum_probs=290.5
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.+.++++ ++.+.+++.+... .....|++. ..++++++++++.+.++ .++++++|+
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~~~~l~~~l~~~~g--~~~~~~~v~ 86 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIE------------HPIFGYTLP--PENIGDIICNWTKKQYN--WDIQKEWIV 86 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHH------------SCCCCCCCC--CTTHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--CHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 457899999998885 5677777666421 124567655 58999999999998876 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++++++ ++|.+|++++++.+.. ++++
T Consensus 87 ~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~ 159 (383)
T 3kax_A 87 FSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEMVTTN-NRQLCVSPLQKQNDTYAIDFEHLEKQFQQ------GVKL 159 (383)
T ss_dssp EESCHHHHHHHHHHHHCCTTCEEEECSSCCHHHHHHHHHT-TCEEEECCCEEETTEEECCHHHHHHHHTT------TCCE
T ss_pred EcCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHc-CCEEEeccceecCCcEEEcHHHHHHHhCc------CCeE
Confidence 9999999999999999999999999999999998888877 999999998643 3578999999999843 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..+++++++|||
T Consensus 160 v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~~~~i~~~s~s 229 (383)
T 3kax_A 160 MLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADH--THTPFASLSEE--------LAARTITCMAPS 229 (383)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHH--------HHTTEEEEECSH
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CceeHhhcCcc--------ccCcEEEEEECh
Confidence 99999999999999999999999999999999999999998777654 34455444321 127899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc---cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS---FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
|.+|++|+|+||++++++.+.+.+..... +++.+++.|.++..++.+. .+++++.++.++++++.+.+.|++.
T Consensus 230 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~ 306 (383)
T 3kax_A 230 KTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC---NDWLNEIRFYIEDNAKFACEYIKDHI 306 (383)
T ss_dssp HHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhccCcchhheEEEeCCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999866666665554432 3367889999999988873 4567888889999999999999985
Q ss_pred -CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 349 -GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 349 -g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
|+.+.++++++++|++++... ....+++..|++++||.++||..|+....+++||+++. +++++++++++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~ 380 (383)
T 3kax_A 307 PTLSVMKPEGSFLLWIDCSALN-----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRH 380 (383)
T ss_dssp TTCEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHH
T ss_pred CCceEecCCceEEEEEEccccC-----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHH
Confidence 899999999999999997521 01235777777678999999999987678899999995 89999999999998
Q ss_pred HH
Q 037587 428 FA 429 (464)
Q Consensus 428 ~l 429 (464)
++
T Consensus 381 ~l 382 (383)
T 3kax_A 381 TF 382 (383)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 22
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.7e-45 Score=359.53 Aligned_cols=332 Identities=17% Similarity=0.200 Sum_probs=277.7
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+|+++ ++.+.+++.+. ......|++..+ .++|+++|++++ +++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~v~~ 87 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQN-------------ANKAHLYPDDSM-IELKSTLAQKYK--------VQNENIII 87 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHH-------------GGGTTSCCCTTC-HHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHH-------------HHhhccCCCCCh-HHHHHHHHHHhC--------CCcceEEE
Confidence 57899999999985 46677776664 234567887766 999999999985 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||+|+++.|+|..+...+... |++++.+++ ..+++ +|++++++.++. ++++|+
T Consensus 88 ~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~-~~~~~-~d~~~l~~~l~~------~~~~v~ 158 (365)
T 3get_A 88 GAGSDQVIEFAIHSKLNSKNAFLQAGVTFAMYEIYAKQC-GAKCYKTQS-ITHNL-DEFKKLYETHKD------EIKLIF 158 (365)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHHH-TCEEEECSS-SSCCH-HHHHHHHHHTTT------TEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEeCCChHHHHHHHHHc-CCEEEEEec-CCCCC-CCHHHHHHHhCC------CCCEEE
Confidence 999999999999999999999999999999998888877 999999998 23567 999999998863 899999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
+++||||||.++|.+++++++++| ++|+++|+||+|.++.| .+. ...+...... ..+++++++|||
T Consensus 159 ~~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~s~s 226 (365)
T 3get_A 159 LCLPNNPLGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK--KHLEPCELIK---------EFDNVLYLGTFS 226 (365)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG--GCCCHHHHHH---------HCTTEEEEEESS
T ss_pred EcCCCCCCCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc--ccccHhHHhc---------cCCCEEEEeecc
Confidence 999999999999999999999999 57999999999998764 432 2234444433 237899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
|.+|++|+|+||+++ ++.+.+.+......++++.+.|.++..++++. +++++.++.++++++.+.+.|+++|+++
T Consensus 227 K~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 301 (365)
T 3get_A 227 KLYGLGGLRIGYGIA-NANIISAFYKLRAPFNVSNLALKAAVAAMDDD----EFTEKTLENNFSQMELYKEFAKKHNIKI 301 (365)
T ss_dssp STTSCTTTCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHTCH----HHHHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred hHhcCcchheEEEEc-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 999999999999999 56666667666666678999999999999975 4578888899999999999999999998
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.++.++ |+|++++.. ...++...|. ++||.++||..|+ ++++||+++ +++++++++++|++++
T Consensus 302 ~~~~~~-~~~~~~~~~-------~~~~~~~~l~-~~gi~v~~g~~~~---~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 302 IDSYTN-FITYFFDEK-------NSTDLSEKLL-KKGIIIRNLKSYG---LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CCCSSS-EEEEECSSS-------CHHHHHHHHH-TTTEECEECGGGT---CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred CCCCCe-EEEEECCCC-------CHHHHHHHHH-HCCEEEEECccCC---CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 877765 789999753 1234666665 6799999999886 789999998 7999999999999876
No 23
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=7.5e-45 Score=363.85 Aligned_cols=348 Identities=20% Similarity=0.401 Sum_probs=279.2
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|||+.+.+.++ ++.+.+++.+..... .......|++..|..++|+++++++++.++ +++++++|+
T Consensus 34 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--------~~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~i~ 103 (398)
T 3ele_A 34 KENVYDFSIGNPSIPAPQIVNDTIKELVTDY--------DSVALHGYTSAQGDVETRAAIAEFLNNTHG--THFNADNLY 103 (398)
T ss_dssp GGGCEECCSCCCCSCCCHHHHHHHHHHHHHS--------CHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeEEeecCCCCCCCCHHHHHHHHHHHhcC--------CccccCCcCCCCCcHHHHHHHHHHHHHHhC--CCCChHHEE
Confidence 357899999966653 466777766642210 001156798888999999999999998877 446889999
Q ss_pred EeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++| |+|+++.|+|.++...+... |++++.+++++ ++|.+|+++|++.+++ ++++
T Consensus 104 ~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~-~~~~~d~~~l~~~l~~------~~~~ 175 (398)
T 3ele_A 104 MTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAA-GARLVEVPADT-EHFQIDFDALEERINA------HTRG 175 (398)
T ss_dssp EESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCT-TTSSCCHHHHHHTCCT------TEEE
T ss_pred EccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHc-CCEEEEEecCC-cCCcCCHHHHHHHhCc------CCCE
Confidence 99999999999999999999 99999999999999888877 99999999875 3688999999998754 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhh------CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKS------KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~------~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
|++++||||||.++|.+++++|+++|++ +|+++|+||+|.++.+++. ....... ..++++
T Consensus 176 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~------------~~~~~i 241 (398)
T 3ele_A 176 VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI--KVPFVTK------------YYDNTL 241 (398)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC--CCCCGGG------------TCSSEE
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC--CcCChHh------------hcCCeE
Confidence 9999999999999999999999999999 9999999999999777653 2222211 236899
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHH-----HHHHHHHh---cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNER-----VVSAATKM---SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRK 338 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~-----~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (464)
+++||||+||++|+|+||++++++. +...+... ....+.+.+.|.++..++++... ++.+++++
T Consensus 242 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--------~~~~~~~~ 313 (398)
T 3ele_A 242 VCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATGD--------INAYKENR 313 (398)
T ss_dssp EEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCCC--------HHHHHHHH
T ss_pred EEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHHH--------HHHHHHHH
Confidence 9999999999999999999997652 22222221 22345677889888888876542 45566778
Q ss_pred HHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHH
Q 037587 339 EMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETL 418 (464)
Q Consensus 339 ~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l 418 (464)
+++.+.|+++|+.+.++++|+|+|++++.. ...+++..+ .++||.++||..|+. ++++||+++ .+++++
T Consensus 314 ~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~g~~~~~--~~~iRis~~-~~~e~i 382 (398)
T 3ele_A 314 DLLYEGLTRIGYHCFKPDGAFYMFVKALED-------DSNAFCEKA-KEEDVLIVAADGFGC--PGWVRISYC-VDREMI 382 (398)
T ss_dssp HHHHHHHHHHTCCEECCSBSSEEEEECSSS-------CHHHHHHHH-HTTTEECEESGGGTC--TTEEEEECC-SCHHHH
T ss_pred HHHHHHHHHcCCeecCCCeeEEEEEEcCCC-------CHHHHHHHH-HHCCEEEeCccccCC--CCeEEEEec-CCHHHH
Confidence 888888888899999999999999998742 122455554 678999999998864 679999998 599999
Q ss_pred HHHHHHHHHHHHhhC
Q 037587 419 QVALQRIKVFAQSCN 433 (464)
Q Consensus 419 ~~~l~~l~~~l~~~~ 433 (464)
++++++|++++++.+
T Consensus 383 ~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 383 KHSMPAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998764
No 24
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=4.8e-45 Score=363.81 Aligned_cols=350 Identities=20% Similarity=0.306 Sum_probs=283.2
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+... .....|++..|..++|+++++++.+.+| .+++++ +|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~~~v~ 95 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVA------------QGANQYAPMTGVQALREAIAQKTERLYG--YQPDADSDIT 95 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHS--CCCCTTTTEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHH------------hhccCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCCEE
Confidence 36799999988764 4667776665421 1145788877899999999999988766 346788 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|+++.|+|+.+...++.. |++++.++++++ +|.+|+++|++.+.. ++++|
T Consensus 96 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~d~~~l~~~l~~------~~~~v 167 (386)
T 1u08_A 96 VTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALS-GGIVKRMALQPP-HFRVDWQEFAALLSE------RTRLV 167 (386)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCTT-TCCCCHHHHHHHCCT------TEEEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeecCcc-cCcCCHHHHHHhhcc------cCEEE
Confidence 9999999999999999999999999999999999888877 999999998753 578999999988743 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.|++. .+.++..+.. ..++++++.||||
T Consensus 168 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~---------~~~~~i~~~s~sK 236 (386)
T 1u08_A 168 ILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQ--GHASVLAHPQ---------LRERAVAVSSFGK 236 (386)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSS--CCCCGGGSHH---------HHTTEEEEEEHHH
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCC--CCcChhcccC---------ccCcEEEEecchh
Confidence 9999999999999999999999999999999999999998777554 2334433321 1268999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.+|++|+|+||++++ +.+.+.+.... ..++++++.|.++..+++.. .+++++.++.++++++.+.+.|++.|++
T Consensus 237 ~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 312 (386)
T 1u08_A 237 TYHMTGWKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADMLRAE---PEHYLALPDFYRQKRDILVNALNESRLE 312 (386)
T ss_dssp HTTCGGGCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC---THHHHTHHHHHHHHHHHHHHHTTSSSCE
T ss_pred hcCCcccceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 999999999999995 44555554433 23457888898888888753 3457888899999999999999988999
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
+.++++|+|+|++++.... .+..+++..+++++||.++||..|+. ..++++||+++. +++++++++++|++
T Consensus 313 ~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 313 ILPCEGTYFLLVDYSAVST----LDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp ECCCCBSSEEEEECTTTCC----SCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred ecCCCceEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 8888889999999975310 11235777777778999999988864 246799999985 89999999999864
No 25
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=5.2e-45 Score=365.13 Aligned_cols=358 Identities=17% Similarity=0.200 Sum_probs=288.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.++++ ++.+.+++.+... .....|++. ..++|+++++++++.+| +++++++|+
T Consensus 30 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~ 93 (399)
T 1c7n_A 30 GNEVVPLSVADMEFKNPPELIEGLKKYLD------------ETVLGYTGP--TEEYKKTVKKWMKDRHQ--WDIQTDWII 93 (399)
T ss_dssp CTTCCCCCSSSCSSCCCHHHHHHHHHHHH------------HCCCSSBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCceeeeecCCCCCCCHHHHHHHHHHHh------------cCCCCCCCC--cHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 357899999988764 5667777666421 123568764 79999999999987766 346788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.++++ +++.|.+|+++|++.+++ .++++
T Consensus 94 ~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~ 167 (399)
T 1c7n_A 94 NTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ-ERKIIECELLEKDGYYTIDFQKLEKLSKD-----KNNKA 167 (399)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTT-TCEEEECCCEEETTEEECCHHHHHHHHTC-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHc-CCEEEecccccCCCCEEEcHHHHHHHhcc-----CCCcE
Confidence 9999999999999999999999999999999998888776 9999999885 334578999999998862 27899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..++++++.|||
T Consensus 168 v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~~~~i~~~s~s 237 (399)
T 1c7n_A 168 LLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQ--------LADKTITFTAPS 237 (399)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHH--------HHTTEEEEECSH
T ss_pred EEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCcc--------ccCcEEEEEeCh
Confidence 99999999999999999999999999999999999999998776554 33444433211 026889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-C
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-A 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~ 348 (464)
|.+|++|+|+||++++++.+.+.+...... .+++++.|.++.++++.. .+++++.++.++++++.+.+.|++ +
T Consensus 238 K~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 314 (399)
T 1c7n_A 238 KTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKEC---GKWLDGCIKVIDKNQRIVKDFFEVNH 314 (399)
T ss_dssp HHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhccccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999766565555544332 256888999888888643 356788888999999999999998 5
Q ss_pred -CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 349 -GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 349 -g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
|+.+.++.+++++|++++... ....+++..|++++||.+.||..|+...++++||+++. +++++++++++|++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~ 388 (399)
T 1c7n_A 315 PEIKAPLIEGTYLQWIDFRALK-----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNK 388 (399)
T ss_dssp TTSBCCCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHH
T ss_pred CCCeEecCCceEEEEEEcccCC-----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHH
Confidence 888888899999999997420 01235777776678999999998875557899999996 68999999999999
Q ss_pred HHHhhC
Q 037587 428 FAQSCN 433 (464)
Q Consensus 428 ~l~~~~ 433 (464)
++++.+
T Consensus 389 ~l~~~~ 394 (399)
T 1c7n_A 389 ALKDLK 394 (399)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 998765
No 26
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-45 Score=364.37 Aligned_cols=348 Identities=18% Similarity=0.266 Sum_probs=281.6
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KL 112 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i 112 (464)
..++|||+.+.++++ ++.+.+++.+.... .....|++..|..++|+++|+++.+.+| ++++++ +|
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~l~~~ia~~~~~~~g--~~~~~~~~v 90 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALND-----------PTTYGYCLKSCTLPFLEEAARWYEGRYG--VGLDPRREA 90 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTC-----------GGGSSCCCHHHHHHHHHHHHHHHHHHHS--CCCCTTTSE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhC-----------CCcCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCccE
Confidence 346799999998874 46677766654210 1245787766789999999999987766 334566 99
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.+++ +++|.+|++.+++.+.. ++++
T Consensus 91 ~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~~~~--~~~~~~d~~~l~~~l~~------~~~~ 161 (376)
T 2dou_A 91 LALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVA-SLRTFLIPL--REDGLADLKAVPEGVWR------EAKV 161 (376)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHT-TCEEEEECB--CTTSSBCGGGSCHHHHH------HEEE
T ss_pred EEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHc-CCEEEEeeC--CCCCCCCHHHHHHhhcc------CceE
Confidence 99999999999999999999999999999999998888877 999999998 35778899999998865 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.. ..+++++++|||
T Consensus 162 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~---------~~~~~i~~~s~s 229 (376)
T 2dou_A 162 LLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE---APSPLALPG---------AKERVVELFSLS 229 (376)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC---CCCGGGSTT---------GGGTEEEEEEHH
T ss_pred EEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC---CCChhhcCC---------CCCcEEEEecch
Confidence 99999999999999999999999999999999999999998766543 123333322 236889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.||++|+|+||++++ +.+.+.+...... .+++++.|.++..++++. .+++++.++.++++++.+.+.|+++ +
T Consensus 230 K~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-~ 304 (376)
T 2dou_A 230 KSYNLAGFRLGFALGS-EEALARLERVKGVIDFNQYAGVLRMGVEALKTP---KEVVRGYARVYRERALGMAEALKGV-L 304 (376)
T ss_dssp HHHTCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHHHTTT-S
T ss_pred hhcCChhheeEEEecC-HHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCc---HHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 9999999999999985 4555555443322 346889999999999873 4567888899999999999999988 8
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.+.++.+|+|+|++++.... ..+++..++++ ||.++||..|+...++++||+++. +++++++++++|++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 305 SLLPPRATMYLWGRLPEGVD------DLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp EECCCCBSSEEEEECCTTCC------HHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred CccCCCeeEEEEEECCCCCC------HHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 88888889999999974221 23577777655 999999998875457899999985 8999999999998764
No 27
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=8.9e-45 Score=362.08 Aligned_cols=355 Identities=18% Similarity=0.365 Sum_probs=286.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.++++ ++.+.+++.+... .....|++..|..++|+++++++++.++ +++++++|+
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~ 94 (388)
T 1j32_A 29 GIDVCSFSAGEPDFNTPKHIVEAAKAALE------------QGKTRYGPAAGEPRLREAIAQKLQRDNG--LCYGADNIL 94 (388)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHhcC--CCCChhhEE
Confidence 356799999998764 4666666655321 1235698888899999999999998776 345788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|++++|+|+++...++.. |++++.++.+++++|.+|++.|++.+++ ++++|
T Consensus 95 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v 167 (388)
T 1j32_A 95 VTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLA-EGTPVILPTTVETQFKVSPEQIRQAITP------KTKLL 167 (388)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEECCCGGGTTCCCHHHHHHHCCT------TEEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCEEEEecCCcccCCCCCHHHHHHhcCc------CceEE
Confidence 9999999999999999999999999999999998888776 9999999987555688999999998754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+..+ ..++++++.|+||
T Consensus 168 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~s~sK 237 (388)
T 1j32_A 168 VFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDA--QHLSIGAASPE--------AYERSVVCSGFAK 237 (388)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHH--------HHHTEEEEEESTT
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC--CCCCHHHcccc--------ccCCEEEEeechh
Confidence 9999999999999999999999999999999999999998777554 33444444221 0257899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
.+|++|+|+||+++++ .+.+.+..... .+.++++.|.++..+++.. .+++++.++.++++++++.+.|+++ |+
T Consensus 238 ~~~~~G~r~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 313 (388)
T 1j32_A 238 TYAMTGWRVGFLAGPV-PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS---QDCVQEMLAAFAERRRYMLDALNAMPGL 313 (388)
T ss_dssp TTTCTTTCCEEEECCH-HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC---SHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred ccCCcccceEEEEeCH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999954 45554544332 2457788898888888643 3457788888999999999999988 88
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++.++.+|+|+|++++.. . .+..+++..+++++||.+.||..|+. ++++||+++ .+++++++++++|+++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRis~~-~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 314 ECPKPDGAFYMFPSIAKT-G----RSSLDFCSELLDQHQVATVPGAAFGA--DDCIRLSYA-TDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp BCCCCCBTTEECCBCGGG-T----CCHHHHHHHHHHHHCEECEEGGGGTC--TTBEEEECC-SCHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCCC-C----CCHHHHHHHHHHhCCEEEeChhhhCC--CCcEEEEec-CCHHHHHHHHHHHHHHHH
Confidence 888888999999988642 0 11235777777667999999988864 678999998 589999999999999987
Q ss_pred hh
Q 037587 431 SC 432 (464)
Q Consensus 431 ~~ 432 (464)
+.
T Consensus 386 ~~ 387 (388)
T 1j32_A 386 GI 387 (388)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 28
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=3.4e-45 Score=372.37 Aligned_cols=358 Identities=16% Similarity=0.203 Sum_probs=283.2
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.+.+.++ ++.+.+++.+..... ........|++..|..+||+++++++. ++ +++++++|+
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-------~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g--~~~~~~~i~ 136 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGL-------ATREGYSGYGAEQGQGALREAVASTFY--GH--AGRAADEIF 136 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGG-------GGSCCCCCSTTTTCCHHHHHHHHHHHH--TT--TTCCGGGEE
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhh-------ccccCCCCCCCCCCcHHHHHHHHHHHH--cC--CCCCHHHEE
Confidence 457899999988875 466666666542210 000234578888899999999999997 33 457889999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcE----------EEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVE----------IVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~----------~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+|+|+++++..+ .+++++||.|++++|+|.++...+... |.+ ++.++++.++++..+++.+
T Consensus 137 ~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 207 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMM-GMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------- 207 (449)
T ss_dssp EESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHH-TCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-------
T ss_pred EccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHc-CCcccccccccceeEEEecccccCCcCChhHc-------
Confidence 999999999999 888899999999999999999888876 888 9999988666676665432
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
+++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ...++..+.. ..+
T Consensus 208 ----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~---------~~~ 272 (449)
T 3qgu_A 208 ----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPD--CPKTIYEIPG---------ADE 272 (449)
T ss_dssp ----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTT--SCSSGGGSTT---------GGG
T ss_pred ----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCC--CCCCHhhccC---------CCC
Confidence 3788999999999999999999999999999999999999999998777654 3344444321 236
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEecCHHHH-------HHHHHh--cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYSNNERVV-------SAATKM--SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRL 334 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~-------~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 334 (464)
+++++.||||+||++|+|+||++++++.+. ..+... ..+++.+++.|.++..++.+.. .+++++.++.+
T Consensus 273 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~ 350 (449)
T 3qgu_A 273 VAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEG--LKEMNAMIKFY 350 (449)
T ss_dssp TEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHH--HHHHHHHHHHH
T ss_pred cEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcC--HHHHHHHHHHH
Confidence 889999999999999999999999665432 122222 2344678899999999998633 35688889999
Q ss_pred HHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCC
Q 037587 335 RKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANIT 414 (464)
Q Consensus 335 ~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~ 414 (464)
+++++++.+.|++.|+.+.++++++|+|++++ ... ..+++..+++++||.++||..|+..+++++||++.. +
T Consensus 351 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~ 422 (449)
T 3qgu_A 351 KENAQILKTTFTEMGFSVYGGDDAPYIWVGFP-GKP------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-S 422 (449)
T ss_dssp HHHHHHHHHHHHHTTCCEEESSSSSEEEEECT-TSC------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-C
T ss_pred HHHHHHHHHHHHHCCCeeeCCCCeeEEEEECC-CCC------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-C
Confidence 99999999999999999998888899999997 211 235778888778999999999987678999999875 8
Q ss_pred HHHHHHHHHHHHHHHHhhCcccc
Q 037587 415 EETLQVALQRIKVFAQSCNPQML 437 (464)
Q Consensus 415 ~e~l~~~l~~l~~~l~~~~~~~~ 437 (464)
++++++++++|++++++.+.|-+
T Consensus 423 ~e~i~~~l~~l~~~~~~~~~~~~ 445 (449)
T 3qgu_A 423 RENILEAVRRFKEAYGKRNASHH 445 (449)
T ss_dssp HHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHhcCcccc
Confidence 99999999999999987776543
No 29
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-44 Score=358.82 Aligned_cols=346 Identities=24% Similarity=0.417 Sum_probs=281.3
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.++++ ++.+.+++.+... .....|++..|..++|+++|+++++.+| +++++++|+
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~v~ 105 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQ------------KGEVKYTDPRGIYELREGIAKRIGERYK--KDISPDQVV 105 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCTTCCHHHHHHHHHHHHHHHT--CCCCGGGEE
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 346799999998765 4566666655321 1124688777899999999999987766 345788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||.|++++|+|+++...+... |++++.++.+++++|.+|+++|++.+++ ++++|
T Consensus 106 ~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v 178 (389)
T 1o4s_A 106 VTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILA-GGTVNVVETFMSKNFQPSLEEVEGLLVG------KTKAV 178 (389)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECCGGGTTCCCHHHHHHTCCT------TEEEE
T ss_pred EecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEecCCccCCCCCHHHHHHhccc------CceEE
Confidence 9999999999999999999999999999999999888876 9999999987545688999999988754 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. ..++..+.. ..+++++++||||
T Consensus 179 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~---~~~~~~~~~---------~~~~~i~~~s~sK 246 (389)
T 1o4s_A 179 LINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE---FTSILDVSE---------GFDRIVYINGFSK 246 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC---CCCHHHHCS---------SSTTEEEEEESTT
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC---CCCHhhcCC---------CCCcEEEEeechh
Confidence 9999999999999999999999999999999999999998766432 234444411 2378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
.+|++|+|+||++++ +.+.+.+..... .++++++.|.++..++++. +++.++.++++++.+.+.|+++|++
T Consensus 247 ~~~~~G~r~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~g~~ 319 (389)
T 1o4s_A 247 SHSMTGWRVGYLISS-EKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKMGVK 319 (389)
T ss_dssp TTTCGGGCCEEEECC-HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hcCCcccceEEEEeC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 999999999999995 445555544332 2457888999998888864 4556777888889999999988888
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++.+|+|+|++++ .. ..+++..+++++||.+.||..|+. ++++||+++. +++++++++++|++++++
T Consensus 320 ~~~~~~~~~~~~~~~--~~------~~~l~~~l~~~~gi~v~~g~~f~~--~~~~Ris~~~-~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 320 FVEPEGAFYLFFKVR--GD------DVKFCERLLEEKKVALVPGSAFLK--PGFVRLSFAT-SIERLTEALDRIEDFLNS 388 (389)
T ss_dssp CCCCSBSSEEEEECS--SC------HHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECCS-CHHHHHHHHHHHHHHHTC
T ss_pred eecCCcceEEEEeCC--CC------HHHHHHHHHHHCCEEEeCchhcCC--CCeEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 888888999999986 11 235777777578999999988864 5699999995 899999999999998753
No 30
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-44 Score=361.90 Aligned_cols=366 Identities=19% Similarity=0.339 Sum_probs=284.6
Q ss_pred CCCceEEeecccc----cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHc----CCC
Q 037587 34 NPSGIIQMGLAEN----QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIR----GNK 104 (464)
Q Consensus 34 ~~~~~i~l~~~~n----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~----~~~ 104 (464)
++.++|+|+.+.+ .+ +++.+.+++.+.... .....|++..|..++|+++|+++++.+ ..+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~ 99 (416)
T 1bw0_A 31 SPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDS-----------QECNGYFPTVGSPEAREAVATWWRNSFVHKEELK 99 (416)
T ss_dssp SCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHT-----------TCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTG
T ss_pred cCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhC-----------CccCCcCCCCCCHHHHHHHHHHHHhhhcccccCC
Confidence 3467899999864 23 456677766654211 124578887889999999999998421 112
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
+++++++|++|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.++++++++|.+|+++|++.+++
T Consensus 100 ~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 176 (416)
T 1bw0_A 100 STIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAY-GIGMHFYNCRPENDWEADLDEIRRLKDD-- 176 (416)
T ss_dssp GGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEEEGGGTTEECHHHHHHHCCT--
T ss_pred CCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHc-CcEEEEeecCcccCCCCCHHHHHHHhcc--
Confidence 4567899999999999999999999999999999999999998888776 9999999987655688999999988754
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC--CccchhhhhhccCcCCCCCCC
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS--SFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~ 262 (464)
+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.|.+... .+.++..+. ..
T Consensus 177 ----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~----------~~ 242 (416)
T 1bw0_A 177 ----KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE----------TT 242 (416)
T ss_dssp ----TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC----------CS
T ss_pred ----CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc----------CC
Confidence 68899999999999999999999999999999999999999999876654200 122332221 22
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEEecCH-----HHHHHHHHh-cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIYSNNE-----RVVSAATKM-SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRK 336 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~~~~~-----~~~~~~~~~-~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 336 (464)
+++++++||||.|+++|+|+||++++++ .+....+.. ...++++++.|.++..+++... .+++++.++.+++
T Consensus 243 ~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~ 320 (416)
T 1bw0_A 243 VPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTP--QEHLDQIVAKIEE 320 (416)
T ss_dssp CCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSC--HHHHHHHHHHHHH
T ss_pred CcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhccc--HHHHHHHHHHHHH
Confidence 4689999999999999999999998664 232222222 1345678899999999887532 4457788888899
Q ss_pred HHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCH
Q 037587 337 RKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITE 415 (464)
Q Consensus 337 ~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~ 415 (464)
+++++.+.|+++ |+.+..+.+|+|+|++++....... ....+++..+++++||.++||..|+. ++++||+++ .++
T Consensus 321 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~f~~--~~~iRis~~-~~~ 396 (416)
T 1bw0_A 321 SAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDI-KTDVEFFEKLLEEENVQVLPGTIFHA--PGFTRLTTT-RPV 396 (416)
T ss_dssp HHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSC-CSHHHHHHHHHHHHCEECEEGGGGTC--TTEEEEECC-SCH
T ss_pred HHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCC-CCHHHHHHHHHHHCCEEEecccccCC--CCeEEEEec-CCH
Confidence 999999999987 8888878888899998864210000 11235777777788999999998863 679999997 589
Q ss_pred HHHHHHHHHHHHHHHhhC
Q 037587 416 ETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 416 e~l~~~l~~l~~~l~~~~ 433 (464)
+++++++++|.+++++.+
T Consensus 397 e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 397 EVYREAVERIKAFCQRHA 414 (416)
T ss_dssp HHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998754
No 31
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.7e-44 Score=362.23 Aligned_cols=359 Identities=17% Similarity=0.298 Sum_probs=287.5
Q ss_pred CCceEEeecc-ccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-Cc
Q 037587 35 PSGIIQMGLA-ENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP-NK 111 (464)
Q Consensus 35 ~~~~i~l~~~-~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~ 111 (464)
+..+|||+.+ .++++ ++.+.+++.+.... .....|++..|..++++++++++.+.++ .++++ ++
T Consensus 38 ~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~l~~~l~~~~g--~~~~~~~~ 104 (407)
T 3nra_A 38 EGRPVDFSHGDVDAHEPTPGAFDLFSAGVQS-----------GGVQAYTEYRGDLGIRDLLAPRLAAFTG--APVDARDG 104 (407)
T ss_dssp CSCCEETTSCCTTTSCCCTTHHHHHHHHHHH-----------THHHHSCCTTCCHHHHHHHHHHHHHHHT--SCCCTTTS
T ss_pred CCceeeecCcCCCCCCCcHHHHHHHHHHHhc-----------CCCCCcCCCCCCHHHHHHHHHHHHHHhC--CCCCCCCc
Confidence 3458999985 44443 46666666654221 1234688888999999999999998877 33445 79
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC----CCCcccCHHHHHHHHHHHhhcC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS----SNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~----~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.++.+. ++++.+|++.|++.+++
T Consensus 105 i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 178 (407)
T 3nra_A 105 LIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYVSADETRAGLDLTGLEEAFKA----- 178 (407)
T ss_dssp EEEESHHHHHHHHHHHTTCCTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-----
T ss_pred EEEeCCcHHHHHHHHHHhCCCCCEEEEcCCcccchHHHHHHc-CCEEEEeecccccccCcCCCcCHHHHHHHHhh-----
Confidence 999999999999999999999999999999999998888877 99999999842 35788999999999875
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++++|++++||||||.++|.+++++|+++|+++|+++|+||+|..+.+++. .+.++..+.. ...+++++
T Consensus 179 -~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~--~~~~~~~~~~--------~~~~~~i~ 247 (407)
T 3nra_A 179 -GARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGA--SYTHLRAEAA--------VDAENVVT 247 (407)
T ss_dssp -TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTC--CCCCGGGCTT--------SCGGGEEE
T ss_pred -CCcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCCChhhcCc--------ccCCcEEE
Confidence 788999999999999999999999999999999999999999998877655 3444443320 13478999
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
+.||||.+|++|+|+||++++ +.+.+.+...... .+.+++.|.++..+++.. .+++++.++.++++++.+.+.|
T Consensus 248 ~~s~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L 323 (407)
T 3nra_A 248 IMGPSKTESLSGYRLGVAFGS-RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA---PGWMEDRIARHQAIRDELLHVL 323 (407)
T ss_dssp EECSSSTTCCGGGCCEEEEEC-HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCcccccCCCeeeEEEEEcC-HHHHHHHHHHHhhhccCCChHHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999994 4555555443322 235678888888888753 2346677778888999999999
Q ss_pred HhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHH
Q 037587 346 KVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQR 424 (464)
Q Consensus 346 ~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~ 424 (464)
+++ ++.+..+.+++|+|++++... ....+++..|++++||.++||..|+....+++||+++. +++++++++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~ 397 (407)
T 3nra_A 324 RGCEGVFARTPQAGSYLFPRLPKLA-----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARR 397 (407)
T ss_dssp HTSTTCBCCCCSBSSEECCBCCCBS-----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHH
T ss_pred hcCCCceeccCCeeEEEEEeCCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHH
Confidence 988 888888888899999987521 11235777777778999999999987778899999996 99999999999
Q ss_pred HHHHHHhhC
Q 037587 425 IKVFAQSCN 433 (464)
Q Consensus 425 l~~~l~~~~ 433 (464)
|++++++.+
T Consensus 398 l~~~~~~~~ 406 (407)
T 3nra_A 398 IVTLVERYR 406 (407)
T ss_dssp HHHHHHHHB
T ss_pred HHHHHHHhh
Confidence 999998753
No 32
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.8e-45 Score=365.09 Aligned_cols=357 Identities=20% Similarity=0.331 Sum_probs=285.1
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC-cEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN-KLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+... .....|++..|..++|+++++++++.+| .+++++ +|+
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~~v~ 90 (411)
T 2o0r_A 25 IGAVNLGQGFPDEDGPPKMLQAAQDAIA------------GGVNQYPPGPGSAPLRRAIAAQRRRHFG--VDYDPETEVL 90 (411)
T ss_dssp TTCEESSCSSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCTTTSEE
T ss_pred CCeeeccCcCCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCCCCCceEE
Confidence 35799999988764 4667776665421 1145798888899999999999988776 345787 999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCC-CCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSS-NGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.++++++ ++|.+|++.|++.+++ ++++
T Consensus 91 ~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~------~~~~ 163 (411)
T 2o0r_A 91 VTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMA-GAHRVTVPLVPDGRGFALDADALRRAVTP------RTRA 163 (411)
T ss_dssp EEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEETTEEECCHHHHHHHCCT------TEEE
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCEEEEeeccccccCCCCCHHHHHHhhcc------CceE
Confidence 9999999999999999999999999999999998888776 999999998643 3577999999988753 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. ..++++++.|||
T Consensus 164 v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~---------~~~~~i~~~s~s 232 (411)
T 2o0r_A 164 LIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA--RHLPLAGFDG---------MAERTITISSAA 232 (411)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSTT---------TGGGEEEEEEHH
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcChhhccC---------CCCCEEEEeech
Confidence 99999999999999999999999999999999999999998777554 3344443311 236899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.+|++|+|+||++++ +.+.+.+..... .++.+++.|.++..+++.. .+++++.++.++++++++.+.|++.|+
T Consensus 233 K~~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~ 308 (411)
T 2o0r_A 233 KMFNCTGWKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE---DAWVAALRNSLRARRDRLAAGLTEIGF 308 (411)
T ss_dssp HHTTCTTTCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhcCCccceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC---hHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999995 555555544332 3446778888888888643 456788889999999999999998899
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-----------CCCeEEEEeecCCHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-----------EPGWFRICFANITEETLQ 419 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-----------~~~~~Ris~~~~~~e~l~ 419 (464)
++.++++|+|+|++++.... .+..+++..+++++||.++||..|... .++++||+++. ++++++
T Consensus 309 ~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~ 383 (411)
T 2o0r_A 309 AVHDSYGTYFLCADPRPLGY----DDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLD 383 (411)
T ss_dssp EECCCCBSSEEEEECGGGTC----CCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHH
T ss_pred EecCCCeeEEEEEecCCCCC----CCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHH
Confidence 98888899999999975210 112357777877789999999888322 35789999985 899999
Q ss_pred HHHHHHHHHHHhhC
Q 037587 420 VALQRIKVFAQSCN 433 (464)
Q Consensus 420 ~~l~~l~~~l~~~~ 433 (464)
+++++|++++++.+
T Consensus 384 ~~~~~l~~~~~~~~ 397 (411)
T 2o0r_A 384 EAIRRLSVLAERPA 397 (411)
T ss_dssp HHHHHHGGGGC---
T ss_pred HHHHHHHHHHhccC
Confidence 99999998775543
No 33
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.4e-44 Score=359.57 Aligned_cols=362 Identities=18% Similarity=0.291 Sum_probs=285.9
Q ss_pred CCceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC-CCCC
Q 037587 35 PSGIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK-FDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~~ 110 (464)
..++|||+.+.+.. +++.+.+++.+..... ......|++..|..++|+++|+++.+.+| ++ ++++
T Consensus 42 ~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~g~~~lr~~la~~l~~~~g--~~~~~~~ 110 (425)
T 1vp4_A 42 DKDAISFGGGVPDPETFPRKELAEIAKEIIEKE---------YHYTLQYSTTEGDPVLKQQILKLLERMYG--ITGLDED 110 (425)
T ss_dssp STTCEECCCCSCCGGGSCHHHHHHHHHHHHHHS---------HHHHTSCCCTTCCHHHHHHHHHHHHHHHC--CCSCCGG
T ss_pred CCCceeCCCCCCCcccCCHHHHHHHHHHHHhhc---------chhhcCCCCCCCCHHHHHHHHHHHHhccC--CCCCCcc
Confidence 34689998876432 5666777766542210 01246788888899999999999977655 34 5688
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc--CC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL--NL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~--~~ 188 (464)
+|++|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++++++ .+|++.|++.+++.... +.
T Consensus 111 ~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~ 186 (425)
T 1vp4_A 111 NLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQY-LANFVVVPLEDD---GMDLNVLERKLSEFDKNGKIK 186 (425)
T ss_dssp GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCGG
T ss_pred cEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEEeccCCC---CCCHHHHHHHHHhhhhcccCC
Confidence 9999999999999999999999999999999999998888876 999999998753 38999999998752111 23
Q ss_pred ceEEE-EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 189 KVKGV-LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 189 ~~~~v-il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. .+.++..+. ..+++++
T Consensus 187 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~----------~~~~~i~ 254 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGE--TVDPIFKIG----------GPERVVL 254 (425)
T ss_dssp GEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSC--CCCCHHHHH----------CTTTEEE
T ss_pred CceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC--CCcCHHHhC----------CCCCEEE
Confidence 68887 5789999999999999999999999999999999999998777554 334554441 2368899
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
++||||.|| +|+|+||++++ +.+.+.+..... .++.+++.|.++..++++..+ .+++++.++.++++++.+.+.|
T Consensus 255 ~~s~sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L 331 (425)
T 1vp4_A 255 LNTFSKVLA-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDL-LEQLKPTIELYRRKRTVMLNAL 331 (425)
T ss_dssp EEESTTTTC-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCH-HHHTHHHHHHHHHHHHHHHHHH
T ss_pred Eeccccccc-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999996 455555544322 235688999999999986543 5678888999999999999999
Q ss_pred HhC-----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHH
Q 037587 346 KVA-----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETL 418 (464)
Q Consensus 346 ~~~-----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l 418 (464)
++. |+.+..+.+|+|+|++++...... +++..++++ ||.+.||..|+.. .++++||+++..+++++
T Consensus 332 ~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~------~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i 404 (425)
T 1vp4_A 332 EEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTW------EMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKI 404 (425)
T ss_dssp HHHSTTSTTCEECCCSBSSEEEEECCTTCCTT------TTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEECSSSCHHHH
T ss_pred HHhCCCCCceEEecCCccEEEEEEcCCCCCHH------HHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEeCCCCHHHH
Confidence 885 688877788899999998533222 366777655 9999999988643 46799999987679999
Q ss_pred HHHHHHHHHHHHhhC
Q 037587 419 QVALQRIKVFAQSCN 433 (464)
Q Consensus 419 ~~~l~~l~~~l~~~~ 433 (464)
++++++|++++++..
T Consensus 405 ~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 405 VEGIKRLREVVLEYG 419 (425)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987653
No 34
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.2e-44 Score=363.87 Aligned_cols=329 Identities=19% Similarity=0.299 Sum_probs=265.2
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFD-------PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD 149 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-------~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 149 (464)
...|++..|.++||++|++++.+.+|. ..+ +++|++|+|+++++..++.+++++||.|++++|+|..+...
T Consensus 71 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~--~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 71 ALQYSPSAGIPELLSWLKQLQIKLHNP--PTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp HTSCCCTTCCHHHHHHHHHHHHHHHCC--TTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHhcCC--CCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence 457999999999999999999887772 232 36999999999999999999999999999999999999988
Q ss_pred cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh------hcCCceEEEEE-eCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ------TLNLKVKGVLI-TNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 150 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~------~~~~~~~~vil-~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
++.. |++++.++++++ .+|++.|++.+++.. ....++++|++ ++||||||.++|.+++++|+++|+++|
T Consensus 149 ~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~ 224 (425)
T 2r2n_A 149 LHPL-GCNIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYD 224 (425)
T ss_dssp HGGG-TCEEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTT
T ss_pred HHHc-CCEEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcC
Confidence 8877 999999998642 489999999885210 00135787766 689999999999999999999999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS- 301 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~- 301 (464)
++||+||+|+++.|.+. .+.++..+. ..+++++++||||+|| +|+|+||++++++ +.+.+.....
T Consensus 225 ~~li~De~~~~~~~~g~--~~~~~~~~~----------~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~ 290 (425)
T 2r2n_A 225 FLIIEDDPYYFLQFNKF--RVPTFLSMD----------VDGRVIRADSFSKIIS-SGLRIGFLTGPKP-LIERVILHIQV 290 (425)
T ss_dssp CEEEEECTTGGGBSSSS--CCCCTGGGC----------TTSCEEEEEESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHT
T ss_pred CEEEEECCcccccCCCC--CCCCccccC----------CCCCEEEEccchhhcc-CccceEEEecCHH-HHHHHHHHHHH
Confidence 99999999998877654 334554441 2368999999999999 9999999999654 5554444322
Q ss_pred -cCCCChHHHHHHHHHcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHhC--CC-eeecCCccEEEEEecCcccccCCh
Q 037587 302 -FGLVSSQTQYLLSRMLSD---KKFTCNYMKENRKRLRKRKEMLVSGLKVA--GI-RCLKSNAGLFCWVDMRHLLVSNTF 374 (464)
Q Consensus 302 -~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~-~~~~~~~g~f~~~~l~~~~~~~~~ 374 (464)
.++++.+.|.++..++++ ..+ .+++++.++.++++++.+.+.|++. |+ .+..+.+|+|+|++++.....
T Consensus 291 ~~~~~~~~~q~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~--- 366 (425)
T 2r2n_A 291 STLHPSTFNQLMISQLLHEWGEEGF-MAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDV--- 366 (425)
T ss_dssp TTCSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCC---
T ss_pred hcCCCCHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCH---
Confidence 345788999999999886 333 6778889999999999999999885 76 466778899999999853221
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCC---CCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCN---EPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~---~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+++...+.++||.+.||..|+.. ..+++||+++..+++++++++++|++++++.
T Consensus 367 ---~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 367 ---KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp ---HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 133344456889999999998753 3579999998558999999999999998753
No 35
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=2e-44 Score=364.64 Aligned_cols=355 Identities=17% Similarity=0.201 Sum_probs=282.2
Q ss_pred CceEEeecccc-cccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc--
Q 037587 36 SGIIQMGLAEN-QLSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK-- 111 (464)
Q Consensus 36 ~~~i~l~~~~n-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-- 111 (464)
.++|||+.+.+ +++. +.+ .+++..... +.. .....|++..|..++|+++|+++.+.. +++++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~-~~~~a~~~~-------~~~-~~~~~y~~~~g~~~lr~~ia~~~~~~~---~~~~~~~~~ 114 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFA-SSLDAMFND-------LTP-DEIFPYAPPQGIEELRDLWQQKMLRDN---PELSIDNMS 114 (430)
T ss_dssp TCSEECCCSSCEETTEECCC-HHHHTTBSS-------CCG-GGTSSCCCTTCCHHHHHHHHHHHHHHC---TTCCGGGBC
T ss_pred CCcEEeeeeeccCCCCchhh-HHHHHHHHh-------cCc-ccccccCCCCCCHHHHHHHHHHHhccC---cccCCCccc
Confidence 46799999998 6642 333 112221111 000 135689888899999999999997653 3467888
Q ss_pred -EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc-CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 112 -LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW-RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 112 -i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
|++|+|+++++..++.+++++||+|+++.|+|+++...+.. . |++++.+++++++ |.+|+++|++.+++ .+.+
T Consensus 115 ~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~-~~~d~~~l~~~l~~---~~~~ 189 (430)
T 2x5f_A 115 RPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRN-GANLQTYPIFDKD-GHYTTDSLVEALQS---YNKD 189 (430)
T ss_dssp CCEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTT-CCEEEEECCBCTT-SCBCSHHHHHHHHH---CCSS
T ss_pred eEEEcCCchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhc-CCeEEEEeccCcc-CCcCHHHHHHHHHh---cCCC
Confidence 99999999999999999999999999999999999888887 6 9999999987543 78999999999864 1236
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh-----CCeEEEEeccccccccCCCCCCccchh-hhhhccCcCCCCCCCC
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKS-----KRIHIVSDEIYSGTVFDSPSSSFISIM-EAVMDRNIDESDDLWS 263 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~-----~~~~lI~Deay~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~ 263 (464)
++++++++||||||.++|.+++++|+++|++ +|+++|+||+|.++.+.+. .+.++. .+.. ..+
T Consensus 190 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~---------~~~ 258 (430)
T 2x5f_A 190 KVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV--YTQSLFTALTN---------LHS 258 (430)
T ss_dssp EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS--CCSCHHHHHHT---------TCC
T ss_pred CEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc--cchHHHHHHhh---------ccC
Confidence 8899999999999999999999999999999 9999999999998777654 334544 4421 236
Q ss_pred c---EEEEcCCCcCCCCCccEEEEEEe--cCHHHHHHHHHhc------ccCCCChHHHHHHHHHcC-CchhhHHHHHHHH
Q 037587 264 R---IHIVYSLSKDFSMPGFRVGMIYS--NNERVVSAATKMS------SFGLVSSQTQYLLSRMLS-DKKFTCNYMKENR 331 (464)
Q Consensus 264 ~---vi~l~S~SK~~g~~GlRiG~l~~--~~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~-~~~~~~~~~~~~~ 331 (464)
+ +++++||||.||++|+|+||+++ +++.+.+.+.... ..++++++.|.++..+++ +.++ .+.+++.+
T Consensus 259 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~ 337 (430)
T 2x5f_A 259 NAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNI 337 (430)
T ss_dssp TTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHH
T ss_pred CcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHH
Confidence 7 89999999999999999999998 2344545444332 235688899999999998 8766 45566689
Q ss_pred HHHHHHHHHHHHHHH----hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEE
Q 037587 332 KRLRKRKEMLVSGLK----VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFR 407 (464)
Q Consensus 332 ~~~~~~~~~l~~~l~----~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~R 407 (464)
+.++++++.+.+.|+ +.|+++.++++|+|+|++++ .. +..+++..|++++||.+.|| .++++|
T Consensus 338 ~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~-~~------~~~~~~~~l~~~~gi~v~~g------~~~~iR 404 (430)
T 2x5f_A 338 QTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVH-DV------DPEALRKHLIDKYSIGVIAL------NATDIR 404 (430)
T ss_dssp HHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEES-SS------CHHHHHHHHHHHHCEECEEC------SSSEEE
T ss_pred HHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCC-CC------CHHHHHHHHHHhCCEEEecC------CCCeEE
Confidence 999999999999998 66888888999999999997 21 12357777776589999998 357899
Q ss_pred EEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 408 ICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 408 is~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
|+++..+++++++++++|++++++.
T Consensus 405 is~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 405 IAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp EEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHHHHhc
Confidence 9999558899999999999998765
No 36
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=3.2e-44 Score=358.38 Aligned_cols=352 Identities=15% Similarity=0.215 Sum_probs=282.0
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHH-HHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPD-AKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.++|+|+.+.+.++ ++.+.+++.+... .....|++. ..+ +|+++|+++++.+| +++++++|+
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~~lr~~la~~l~~~~g--~~~~~~~v~ 91 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLM------------HGVFGYSRW--KNDEFLAAIAHWFSTQHY--TAIDSQTVV 91 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCCCS--CCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHh------------CCCCCCCCC--ChHHHHHHHHHHHHHhcC--CCCCHHHEE
Confidence 57899999988764 4667777666421 123567764 578 99999999988766 346788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCC-CcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSN-GFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.+++++++ .|.+|+++|++.+++ .++++
T Consensus 92 ~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~~d~~~l~~~l~~-----~~~~~ 165 (390)
T 1d2f_A 92 YGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGN-QRTVMPVALEKQADGWFCDMGKLEAVLAK-----PECKI 165 (390)
T ss_dssp EESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEECEECSSSEECCHHHHHHHHTS-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHC-CCEEEEeecccCCCccccCHHHHHHHhcc-----CCCeE
Confidence 9999999999999999999999999999999998888877 9999999987543 578999999998853 26899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+.. .. ... +.|||
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~---------~~-~d~-~~s~s 232 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ--PHIPWSNVAR---------GD-WAL-LTSGS 232 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS--CCCCGGGTCC---------SS-EEE-EECSH
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCcCHHHcch---------hh-Hhh-ccCcc
Confidence 99999999999999999999999999999999999999998776554 3445444421 11 023 89999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhc----ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMS----SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV- 347 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 347 (464)
|.+|++|+|+||++++++.+.+.+.... .+++++.+.|.++.++++.. .+++++.++.++++++.+.+.|++
T Consensus 233 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (390)
T 1d2f_A 233 KSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG---APWLDALRIYLKDNLTYIADKMNAA 309 (390)
T ss_dssp HHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987666655554433 34467888888888877642 446788888999999999999998
Q ss_pred C-CCeeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHH
Q 037587 348 A-GIRCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 348 ~-g~~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
+ |+.+.++.+|+++|++++.. .. ..+++..+++++||.++||..|+...++++||+++. +++++++++++|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l 382 (390)
T 1d2f_A 310 FPELNWQIPQSTYLAWLDLRPLNID------DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGL 382 (390)
T ss_dssp CSSCCCCCCSBCSEEEEECGGGCCC------HHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHH
T ss_pred CCCCEEecCCccEEEEEEccccCCC------HHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHH
Confidence 5 88888889999999999753 11 235777776578999999998875457899999996 789999999999
Q ss_pred HHHHHhh
Q 037587 426 KVFAQSC 432 (464)
Q Consensus 426 ~~~l~~~ 432 (464)
++++++.
T Consensus 383 ~~~l~~~ 389 (390)
T 1d2f_A 383 INAIRAV 389 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998764
No 37
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-44 Score=375.41 Aligned_cols=355 Identities=18% Similarity=0.236 Sum_probs=270.6
Q ss_pred eEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHH-HHHcCCCCC-CCCCcEEEe
Q 037587 38 IIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLM-ARIRGNKVK-FDPNKLVLT 115 (464)
Q Consensus 38 ~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~-~~~~~~~~~-~~~~~i~it 115 (464)
+|+|+++++.++++.+.+.+.+. .....|+++.|..++|+++++++ .+..+.+.. .++++|++|
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~--------------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t 171 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDG--------------ILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAV 171 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHH--------------HHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEE
T ss_pred hhecccCCCCCCChHHHHHHHHh--------------hhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEE
Confidence 78999999888776554444432 11257999989999999988866 443332221 256899999
Q ss_pred CChHHHHHHHHHH-----hcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 116 AGSTAANETLMFC-----LADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 116 ~G~~~al~~~~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
+|+++++..++.+ ++++||.|++++|+|+.|...+... .|++++.++++++++|.+|+++|++.+. .+
T Consensus 172 ~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~------~~ 245 (546)
T 2zy4_A 172 EGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD------PA 245 (546)
T ss_dssp EHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS------TT
T ss_pred CCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC------CC
Confidence 9999999999988 5789999999999999998764322 2789999999877789999999987653 37
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHH--hhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFS--KSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~--~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
+++|+++|||||||.++|.+++++|+++| +++|++||+||+|.++.+. +.++.... .+++++
T Consensus 246 ~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~-----~~s~~~~~-----------~~~~i~ 309 (546)
T 2zy4_A 246 IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD-----FQSLFAIC-----------PENTLL 309 (546)
T ss_dssp EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT-----CCCHHHHC-----------GGGEEE
T ss_pred CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc-----CcCHHHhC-----------CCCEEE
Confidence 89999999999999999999999999999 7899999999999986542 23444442 268999
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHH-------------h-------------------------cccCCCChHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATK-------------M-------------------------SSFGLVSSQT 309 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-------------~-------------------------~~~~~~s~~~ 309 (464)
++||||.+|++|+|+||++++++.+.+.+.. . .....++.+.
T Consensus 310 ~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 389 (546)
T 2zy4_A 310 VYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQ 389 (546)
T ss_dssp EEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHH
T ss_pred EEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHH
Confidence 9999999999999999999976523333211 1 1112467788
Q ss_pred HHHH-----HHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccc---cCCh-------
Q 037587 310 QYLL-----SRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLV---SNTF------- 374 (464)
Q Consensus 310 q~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~---~~~~------- 374 (464)
|.++ .+++++. ..+.+++++.++++++.+.+.|. .++.+.++++|||+|++++.... ...+
T Consensus 390 Q~a~a~~a~~all~~~---~~~~~~~r~~~~~r~~~l~~~L~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~ 465 (546)
T 2zy4_A 390 QVQMALFSLFALMDEA---DEYKHTLKQLIRRRETTLYRELG-MPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQ 465 (546)
T ss_dssp HHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHHHHGGGT-SSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-CCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhcc
Confidence 8764 3455543 34678888999999999999986 56666788999999999863110 0000
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
....+++.+++.++||.|.||+.|+. ..+++||+++..+++++++++++|+++++++.
T Consensus 466 ~~~~~~l~~ll~~~gV~v~pG~~F~~-~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 466 SSTGDMLFRIADETGIVLLPGRGFGS-NRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp CCHHHHHHHHHHHHSCCCEESSCTTC-SSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCEEEeCccccCC-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 01223456677788999999999986 46799999987689999999999999987654
No 38
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-44 Score=360.70 Aligned_cols=355 Identities=22% Similarity=0.385 Sum_probs=285.2
Q ss_pred CCceEEeecccc---ccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN---QLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
+.++|+|+.+.+ .++ ++.+.+++.+... .....|++..|..++|+++++++++.++ ++++++
T Consensus 37 g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~l~~~la~~l~~~~g--~~~~~~ 102 (406)
T 1xi9_A 37 GIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIK------------EGHNYYGDSEGLPELRKAIVEREKRKNG--VDITPD 102 (406)
T ss_dssp TCCCEECCCCCGGGTTCCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGG
T ss_pred CCCEEEecCCCCCcCCCCCCHHHHHHHHHHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHhcC--CCCCHH
Confidence 356799999988 443 4556666554321 1124688878899999999999998776 446789
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++..++.+++++||.|++++|+|+++...+... |++++.++++++++|.+|++.|++.+++ ++
T Consensus 103 ~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~------~~ 175 (406)
T 1xi9_A 103 DVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFY-GGKPVEYRTIEEEDWQPDIDDIRKKITD------RT 175 (406)
T ss_dssp GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHT-TCEEEEEEEEGGGTSEECHHHHHHHCCT------TE
T ss_pred HEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHc-CCEEEEeecCCCcCCcCCHHHHHHhhCc------Cc
Confidence 9999999999999999999999999999999999998888776 9999999987545788999999998754 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc-EEEEc
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR-IHIVY 269 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-vi~l~ 269 (464)
++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++..+ + .++ +++++
T Consensus 176 ~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~---~~~~~~~-~----------~~~~~i~~~ 241 (406)
T 1xi9_A 176 KAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGE---HISPGSL-T----------KDVPVIVMN 241 (406)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSC---CCCHHHH-C----------SSSCEEEEE
T ss_pred eEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC---CCCHHHc-C----------CCceEEEEe
Confidence 9999999999999999999999999999999999999999998766332 2344444 1 267 89999
Q ss_pred CCCcCCCCCccEEEEEE--ecCH---HHHHHHHHhccc-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIY--SNNE---RVVSAATKMSSF-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~--~~~~---~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
||||.+|++|+|+||++ ++++ .+.+.+.....+ ++++++.|.++.++++.. .+++++.++.++++++.+.+
T Consensus 242 s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~ 318 (406)
T 1xi9_A 242 GLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP---MDYLKEYMKKLKERRDYIYK 318 (406)
T ss_dssp ESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC---CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC---cHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 7651 444444433322 567889999999888532 23477788889999999999
Q ss_pred HHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 037587 344 GLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVAL 422 (464)
Q Consensus 344 ~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l 422 (464)
.|+++ |+.+.++++|+|+|++++.... .+..+++..+++++||.+.||..|+...++++||+++ .+++++++++
T Consensus 319 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~ 393 (406)
T 1xi9_A 319 RLNEIPGISTTKPQGAFYIFPKIEVGPW----KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAM 393 (406)
T ss_dssp HHHTSTTEECCCCCBSSEECCEECSCSC----SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHH
T ss_pred HHHhCCCCeeecCCeeEEEEEecCccCC----CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHH
Confidence 99988 8888888889999988864210 1123577777767899999999887545689999999 6999999999
Q ss_pred HHHHHHHHhh
Q 037587 423 QRIKVFAQSC 432 (464)
Q Consensus 423 ~~l~~~l~~~ 432 (464)
++|++++++.
T Consensus 394 ~~l~~~l~~~ 403 (406)
T 1xi9_A 394 DRFEKFMKER 403 (406)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 39
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.7e-43 Score=348.33 Aligned_cols=339 Identities=17% Similarity=0.233 Sum_probs=279.0
Q ss_pred CCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 33 HNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
..+.++|||+.|+|+++ ++.+.+++.+. +.....|+. .+..++|+++|++++ +++++
T Consensus 13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~ 70 (354)
T 3ly1_A 13 PSTDNPIRINFNENPLGMSPKAQAAARDA-------------VVKANRYAK-NEILMLGNKLAAHHQ--------VEAPS 70 (354)
T ss_dssp CCSSSCEECSSCCCSSCCCHHHHHHHHHT-------------GGGTTSCCH-HHHHHHHHHHHHHTT--------SCGGG
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHH-------------HhhCcCCCC-CchHHHHHHHHHHhC--------CChHH
Confidence 44668899999999985 56777776654 234567754 467999999999985 67899
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
|++|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.++.++ ++.+|++++++.+++ +++++
T Consensus 71 i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~l~~----~~~~~ 143 (354)
T 3ly1_A 71 ILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIA-GMKVTKVKMLD--NWAFDIEGLKAAVAA----YSGPS 143 (354)
T ss_dssp EEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECCCT--TSCCCHHHHHHHHHT----CSSCE
T ss_pred EEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHHHhcc----CCCCC
Confidence 999999999999999999999999999999999998888877 99999999864 578999999999872 13889
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++||||||.++|.+++++|+++| ++|+++|+||+|.++.+.+. ..+....... ..+++++++||
T Consensus 144 ~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~---~~~~~~~~~~--------~~~~~i~~~s~ 211 (354)
T 3ly1_A 144 IVYLVNPNNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR---FRSISPMITQ--------GAENIILLKTF 211 (354)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT---CCCSHHHHHT--------TCSSEEEEEES
T ss_pred EEEEeCCCCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc---cCCHHHHhhh--------cCCCEEEEeeC
Confidence 999999999999999999999999999 89999999999998766543 2343334331 22788999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIR 351 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 351 (464)
||.+|++|+|+||+++ ++.+.+.+......++++++.|.++..++++.+ ++++.++.++++++++.+.|+++|+.
T Consensus 212 sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~ 286 (354)
T 3ly1_A 212 SKIHAMAGMRVGYAVA-HPTVIALMGRYVAGEKINFSGVDAALASMNDSA----FITYSKKSNDVSRQILLKALEDLKLP 286 (354)
T ss_dssp SSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCSCCCHHHHHHHHHHTTCHH----HHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhhccChhhhheeeec-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 9999999999999999 556666666666667789999999999998754 47888889999999999999988988
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++.+ +|+|++++. +..++...|. ++||.++ |..++ .++++||+++ +++++++++++|++++++
T Consensus 287 ~~~~~~-~~~~~~~~~--------~~~~~~~~l~-~~gi~v~-g~~~~--~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 287 YLPSEG-NFVFHQLVV--------PLKDYQTHMA-DAGVLIG-RAFPP--ADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp BCCCCS-SEEEEECSS--------CHHHHHHHHH-HTTEECC-CCCTT--CTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred ECCCCc-eEEEEECCC--------CHHHHHHHHH-HCCEEEe-ecCCC--CCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 887665 579999974 1224666665 6799998 66443 5789999998 689999999999999876
Q ss_pred h
Q 037587 432 C 432 (464)
Q Consensus 432 ~ 432 (464)
.
T Consensus 352 ~ 352 (354)
T 3ly1_A 352 S 352 (354)
T ss_dssp T
T ss_pred h
Confidence 4
No 40
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.3e-43 Score=357.24 Aligned_cols=352 Identities=16% Similarity=0.212 Sum_probs=275.3
Q ss_pred CceEEeecccc-----cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN-----QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|+|+.++. ++ +++.+.+++.+... .....|++..|.++||+++++++....+.. .+
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~---~~ 102 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD------------SEHVGYAPIAGIPDFLCAAEKECFGNFRPE---GH 102 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH------------HHHHSCCCTTCCHHHHHHHHHHHHGGGCCS---SE
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcc------------cccCCCCCCCChHHHHHHHHHHHhcccCcc---cc
Confidence 46899999963 44 45667777665321 134579888899999999999997544310 12
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|+++++..++.+++++||.|++++|+|..+...+... |++++.+++++++ |.+|++.|++.+++.... +
T Consensus 103 ~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~--~ 178 (418)
T 3rq1_A 103 IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDT-GRTLVTYSLFDEH-NNFNHEAFQNRVNELAAK--Q 178 (418)
T ss_dssp EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHT-TCEEEEECSBCTT-SSBCHHHHHHHHHHHHHH--C
T ss_pred ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHc-CCEEEEEeeeCCC-CCcCHHHHHHHHHHhhcc--C
Confidence 39999999999999999999999999999999999999888877 9999999986443 789999999998753111 3
Q ss_pred eE-EEEEeCC-CCCCCCCCCHHHHHHHHHHHh------hCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 190 VK-GVLITNP-SNPLGTAMTHQELNHLINFSK------SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 190 ~~-~vil~~P-~NPtG~~~s~~~l~~i~~~~~------~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
++ ++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.++.+.+. ...++.....+ .
T Consensus 179 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~--------~ 248 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKD--EVRAFFNKFSH--------L 248 (418)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHH--HHHGGGGGGTT--------C
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChH--HHHHHHHHHHh--------c
Confidence 44 7888999 999999999999999999999 89999999999998655432 22233333222 2
Q ss_pred CCc--EEEEcCCCcCCCCCccEEEEEEe--cCHHHHHHHHHhc------ccCCCChHHHHHHHHHcCCchhh---HHHHH
Q 037587 262 WSR--IHIVYSLSKDFSMPGFRVGMIYS--NNERVVSAATKMS------SFGLVSSQTQYLLSRMLSDKKFT---CNYMK 328 (464)
Q Consensus 262 ~~~--vi~l~S~SK~~g~~GlRiG~l~~--~~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~~~~~~---~~~~~ 328 (464)
.++ +++++||||.||++|+|+||+++ +++.+.+.+.... .+..++.++|.++..++++.++. .+..+
T Consensus 249 ~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 328 (418)
T 3rq1_A 249 PKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERN 328 (418)
T ss_dssp CTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 244 68899999999999999999988 2455555444332 22357889999999999987532 34455
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 329 ENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
+.++.++++++.+.+.|+++|+++.++++|+|+|++++. ..+++.. |.++||.++|| ++++||
T Consensus 329 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~-l~~~gi~v~~g-------~~~iRi 391 (418)
T 3rq1_A 329 CYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPTDS---------ANAICEE-LKKEHIYVIAL-------ANGIRI 391 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECTT---------HHHHHHH-HHHTTEECEEC-------SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCCC---------HHHHHHH-HHhCCEEEecC-------CCCeEE
Confidence 677889999999999999989999999999999998742 2246654 56889999997 357999
Q ss_pred EeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 409 CFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 409 s~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+++.++++++++++++|++++++..
T Consensus 392 s~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 392 AACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp EGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHh
Confidence 9986699999999999999998754
No 41
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=4.4e-44 Score=357.08 Aligned_cols=352 Identities=18% Similarity=0.260 Sum_probs=287.0
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.+++.++ ++.+.+++.+... .....|++ +..++++++++++.+.++ .++++++|+
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~--~~~~~~~~l~~~l~~~~g--~~~~~~~v~ 94 (391)
T 4dq6_A 31 TNDLLPMWVADMDFKAAPCIIDSLKNRLE------------QEIYGYTT--RPDSYNESIVNWLYRRHN--WKIKSEWLI 94 (391)
T ss_dssp CSCSEECCSSSCSSCCCHHHHHHHHHHHT------------TCCCCCBC--CCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHh------------CCCCCCCC--CCHHHHHHHHHHHHHHhC--CCCcHHHeE
Confidence 357899999998875 4677777666421 12345654 569999999999998876 346788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC--CCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS--SSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++++ .++.|.+|+++++++++ +++
T Consensus 95 ~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~ 166 (391)
T 4dq6_A 95 YSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN-NRELIISPLQKLENGNYIMDYEDIENKIK-------DVK 166 (391)
T ss_dssp EESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHT-TCEEEECCCEECTTSCEECCHHHHHHHCT-------TEE
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHc-CCeEEeeeeeecCCCceEeeHHHHHHHhh-------cCC
Confidence 9999999999999999999999999999999998888877 9999999987 45678899999998874 278
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..+++++++||
T Consensus 167 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~~~~i~~~s~ 236 (391)
T 4dq6_A 167 LFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH--KHIPMASISKE--------FEKNTITCMAP 236 (391)
T ss_dssp EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSCHH--------HHHTEEEEECS
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC--CccCHHHcCcc--------ccCcEEEEEec
Confidence 999999999999999999999999999999999999999998777654 33454444221 12688999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhc---ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMS---SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
||.+|++|+|+||++++++.+.+.+.... ..++.+.+.+.++..++... .+++++.++.++++++.+.+.|++.
T Consensus 237 sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 237 TKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG---ESWLESFLEYLESNIDFAIKYINEN 313 (391)
T ss_dssp HHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999997756666555442 23357788888888877753 4567888889999999999999884
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
|+.+.++++++++|++++... ....+++..|++++||.++||..|+....+++||+++ .+++++++++++|+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~i~~~l~~l~ 387 (391)
T 4dq6_A 314 MPKLKVRKPEGTYLLWVDFSALG-----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA-CPRSMLEEALIRIK 387 (391)
T ss_dssp CTTSEECCCSBSSEEEEECGGGC-----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC-SCHHHHHHHHHHHH
T ss_pred CCCCEecCCCccEEEEEEhhhcC-----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc-CCHHHHHHHHHHHH
Confidence 899999999999999997521 1123577777655599999999998766789999999 58999999999999
Q ss_pred HHH
Q 037587 427 VFA 429 (464)
Q Consensus 427 ~~l 429 (464)
+++
T Consensus 388 ~~l 390 (391)
T 4dq6_A 388 NAI 390 (391)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 42
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2e-44 Score=365.22 Aligned_cols=358 Identities=14% Similarity=0.169 Sum_probs=287.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.|.|+++ ++.+.+++.+.... .....|++..|..++|+++|+++++.++ +++++++|+
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~g--~~~~~~~i~ 109 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLRE-----------GVASIYPNLDGLPELKQEASRFAKLFVN--IDIPARACV 109 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHH-----------TGGGSCCCTTCCHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhC-----------CcCcCCCCCCChHHHHHHHHHHHHHhhC--CCCCcccEE
Confidence 357899999999886 46677776654221 1226799888899999999999998776 456789999
Q ss_pred EeCChHHHHHHHHHHhc--CCCC--eEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 114 LTAGSTAANETLMFCLA--DPGD--AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 114 it~G~~~al~~~~~~l~--~~gd--~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
+|+|+++++..++.+++ ++|| +|+++.|+|..+...+... |++++.++++ +++|.+|++.++++++. .+
T Consensus 110 ~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~-~~~~~~d~~~l~~~l~~-----~~ 182 (437)
T 3g0t_A 110 PTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRIL-GQKFESFDLF-EYRGEKLREKLESYLQT-----GQ 182 (437)
T ss_dssp EESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHH-TCCCEEEEGG-GGCTTHHHHHHHHHHTT-----TC
T ss_pred EeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHc-CCEEEEEeec-CCCCccCHHHHHHHHhc-----CC
Confidence 99999999999999998 9999 9999999999998888877 9999999987 45778899999998832 27
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc---cch-hhhhhccCcCCCCCCCCcE
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF---ISI-MEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~---~~~-~~l~~~~~~~~~~~~~~~v 265 (464)
+++|++++||||||.++|.+++++|+++|+++|+++|+||+|+++.+.+. ... +++ ..+ .+ ..+++
T Consensus 183 ~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~-~~--------~~~~~ 252 (437)
T 3g0t_A 183 FCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD-YSHPGEPLYQPSV-AN--------YTDNY 252 (437)
T ss_dssp CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC-CCSTTSSCCCCCG-GG--------TCSCE
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC-cCcccccchhhcc-CC--------CCCcE
Confidence 89999999999999999999999999999999999999999998766532 011 011 222 11 24789
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHH-H-----------------HHHhc--ccCCCChHHHHHHHHHcCCchhhHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVS-A-----------------ATKMS--SFGLVSSQTQYLLSRMLSDKKFTCN 325 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~-----------------~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~ 325 (464)
++++||||.+|++|+|+||+++++ .+.+ . +.... ..++++.+.|.++..++++.+...+
T Consensus 253 i~~~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (437)
T 3g0t_A 253 ILALSSSKAFSYAGQRIGVLMISG-KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEY 331 (437)
T ss_dssp EEEEESTTTTSCGGGCCEEEEECH-HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEcCccCCCCccceeEEEEECH-HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHH
Confidence 999999999999999999999964 4444 3 33322 2356888999999998876532122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeee-------cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVAGIRCL-------KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~-------~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
++++.++.++++++.+.+.|+++|+++. ++.+++|+|++++ ... ..+++..|+ ++||.+.||..|
T Consensus 332 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~l~~~L~-~~gi~v~~~~~~ 403 (437)
T 3g0t_A 332 NFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK-GMD------SSKLIEKFV-RYGMCAITLKTT 403 (437)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET-TCC------HHHHHHHHH-HTTEECEESTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC-CCC------HHHHHHHHH-HcCeEEeecccc
Confidence 3778888999999999999999998887 5478889999997 211 235677765 569999999988
Q ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 399 HCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 399 ~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+...++++||+++..+++++++++++|++++++
T Consensus 404 ~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 404 GSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp TCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 765557899999977899999999999998764
No 43
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=1.3e-43 Score=357.69 Aligned_cols=354 Identities=17% Similarity=0.230 Sum_probs=292.0
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+++.+.++ ++.+.+++.+... .....|++. ..++++++++++.+.++ .++++++|+
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~l~~~l~~~~g--~~~~~~~v~ 123 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGR------------EHIFGYNYF--NDDLYQAVIDWERKEHD--YAVVKEDIL 123 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHH------------HCCSSCBCC--CHHHHHHHHHHHHHHHC--CCCCGGGEE
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHh------------cCCcCCCCC--CHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 568899999988775 4777777766422 123456654 38999999999998876 346788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC-CCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS-SSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |.+++.+|++ .++.|.+|++.|++++.+ +++++
T Consensus 124 ~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~le~~i~~-----~~~~~ 197 (421)
T 3l8a_A 124 FIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN-DHRLVENSLQIINGRFEIDFEQLEKDIID-----NNVKI 197 (421)
T ss_dssp EESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHHHHHHHT-TEEEEEEECEEETTEEECCHHHHHHHHHH-----TTEEE
T ss_pred EcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHC-CCEEEeccccccCCCeeeCHHHHHHHhhc-----cCCeE
Confidence 9999999999999999999999999999999998888877 9999999986 556788999999999874 27999
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..++++++.|+|
T Consensus 198 vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~~~~i~~~s~s 267 (421)
T 3l8a_A 198 YLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN--THHSLNTLDAS--------YKDFTIILSSAT 267 (421)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCTT--------GGGTEEEEECSH
T ss_pred EEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCccHHHcCch--------hcCcEEEEEeCh
Confidence 99999999999999999999999999999999999999999877654 44455444321 237889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhc---ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMS---SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~---~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
|++|++|+|+||++++++.+.+.+.... .+.+.+++.+.++.++++.. .+++++.++.++++++++.+.|+++
T Consensus 268 K~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~ 344 (421)
T 3l8a_A 268 KTFNIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG---KPWLEELKTVIEGNIKLVIKELEAKT 344 (421)
T ss_dssp HHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhccCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999997566766555433 33457888998888888742 4568888889999999999999986
Q ss_pred CCeeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKV 427 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~ 427 (464)
++.+.++++++++|++++.. ... .+++..+++++||.+.||..|+..+.+++||+++ .+++++++++++|++
T Consensus 345 ~i~~~~~~~~~~~~v~~~~~~~~~------~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~-~~~~~i~~~l~~l~~ 417 (421)
T 3l8a_A 345 KIKVMEPEGTYLVWLDFSAYAIAQ------PQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA-TPKNTVQEALSRIIS 417 (421)
T ss_dssp SCEEECCSBSSEEEEECGGGTCCT------THHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC-SCHHHHHHHHHHHHH
T ss_pred CceEeCCCeeEEEEEeccccCCCH------HHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec-CCHHHHHHHHHHHHH
Confidence 89999999999999999752 221 2477777777899999999998767889999999 489999999999998
Q ss_pred HHH
Q 037587 428 FAQ 430 (464)
Q Consensus 428 ~l~ 430 (464)
+++
T Consensus 418 ~l~ 420 (421)
T 3l8a_A 418 VFG 420 (421)
T ss_dssp HC-
T ss_pred HHh
Confidence 875
No 44
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.2e-43 Score=350.05 Aligned_cols=330 Identities=19% Similarity=0.353 Sum_probs=266.0
Q ss_pred cCCCCCCCC--CCceEEeecccccccHH-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 26 NNPYDQLHN--PSGIIQMGLAENQLSFD-LLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 26 ~~~y~~~~~--~~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
-.+|.+... ..++|||+.|+|+++++ .+ . +....+|++. +..++|+++|++++
T Consensus 17 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v-----a--------------~~~~~~Y~~~-~~~~lr~~la~~~~---- 72 (356)
T 1fg7_A 17 LTPYQSARRLGGNGDVWLNANEYPTAVEFQL-----T--------------QQTLNRYPEC-QPKAVIENYAQYAG---- 72 (356)
T ss_dssp CCCCCCCCCCTTTCSEECSSCCCSSCCCCCC-----C--------------CCCTTSCCCS-SCHHHHHHHHHHHT----
T ss_pred cCCCCCCcccCCCceEEeeCCCCCCCCCHhH-----h--------------hhhhccCCCc-cHHHHHHHHHHHhC----
Confidence 345554432 34789999999998653 22 1 1345689876 47999999999995
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 103 NKVKFDPNKLVLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 103 ~~~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
+++++|++|+|+++++..++.+++++| |+|+++.|+|+.+...+... |++++.++++ ++|.+|++++++.++
T Consensus 73 ----~~~~~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~ 145 (356)
T 1fg7_A 73 ----VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETI-GVECRTVPTL--DNWQLDLQGISDKLD 145 (356)
T ss_dssp ----SCGGGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHH-TCEEEECCCC--TTSCCCHHHHHTSCT
T ss_pred ----CChHHEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHHHHHHc-CCEEEEeeCC--CCCCCCHHHHHHHhc
Confidence 678999999999999999999999999 99999999999999888877 9999999876 357889999887652
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
++++|++++||||||.++|.+++++++++|+ +|+++|+||+|.++. .. .++..+.. .
T Consensus 146 -------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~--~~----~~~~~~~~---------~ 202 (356)
T 1fg7_A 146 -------GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFC--PQ----ASLAGWLA---------E 202 (356)
T ss_dssp -------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGS--GG----GCSGGGTT---------T
T ss_pred -------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhc--CC----CcHHHHHh---------h
Confidence 5789999999999999999999999999999 999999999999753 11 23223322 3
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEML 341 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 341 (464)
.+++++++||||.||++|+|+||+++ ++.+.+.+......+++++++|.++.+++++.++ +++++.++.++++++++
T Consensus 203 ~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l 279 (356)
T 1fg7_A 203 YPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPYPLSTPVADIAAQALSPQGI--VAMRERVAQIIAEREYL 279 (356)
T ss_dssp CTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSSCSCHHHHHHHHHHTSHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999 5556666666666667899999999999986543 24778888899999999
Q ss_pred HHHHHhCC--CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC-CCCCCCCCCCeEEEEeecCCHHHH
Q 037587 342 VSGLKVAG--IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP-GSSCHCNEPGWFRICFANITEETL 418 (464)
Q Consensus 342 ~~~l~~~g--~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f~~~~~~~~Ris~~~~~~e~l 418 (464)
.+.|++++ +.+.++ +|+|+|++++. ..+++..| .++||.++| |..|+. ++++||+++ +++++
T Consensus 280 ~~~L~~~~~~~~~~~~-~~~~~~~~~~~---------~~~l~~~L-~~~gI~v~~~g~~~~~--~~~iRis~~--~~~e~ 344 (356)
T 1fg7_A 280 IAALKEIPCVEQVFDS-ETNYILARFKA---------SSAVFKSL-WDQGIILRDQNKQPSL--SGCLRITVG--TREES 344 (356)
T ss_dssp HHHHHHSTTEEEECCC-SSSEEEEEETT---------HHHHHHHH-HHTTEECEECTTSTTC--TTEEEEECC--CHHHH
T ss_pred HHHHHhCCCceEECCC-CCeEEEEECCC---------HHHHHHHH-HHCCEEEEECCCCCCC--CCeEEEEeC--CHHHH
Confidence 99999886 444444 56699999861 22466666 578999999 877763 569999998 58999
Q ss_pred HHHHHHHHH
Q 037587 419 QVALQRIKV 427 (464)
Q Consensus 419 ~~~l~~l~~ 427 (464)
++++++|++
T Consensus 345 ~~~~~~l~~ 353 (356)
T 1fg7_A 345 QRVIDALRA 353 (356)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998875
No 45
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-43 Score=346.99 Aligned_cols=329 Identities=19% Similarity=0.243 Sum_probs=273.4
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.|+|+++ ++.+.+++.+. ......|++ .+..++|++++++++ +++++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~lr~~la~~~~--------~~~~~v~~ 89 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANS-------------SVETEIYPD-GWASSLRKEVADFYQ--------LEEEELIF 89 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTC-------------BSCCCBC-----CHHHHHHHHHHHT--------CCGGGEEE
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHH-------------HHHhhcCCC-cchHHHHHHHHHHhC--------CChhhEEE
Confidence 57899999999985 57777777663 234566765 478999999999996 67899999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
|+|+++++..++.+++++||+|+++.|+|..+...++.. |++++.++.++ ++.+|++++++.+.+ ++++|+
T Consensus 90 ~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~ 160 (363)
T 3ffh_A 90 TAGVDELIELLTRVLLDTTTNTVMATPTFVQYRQNALIE-GAEVREIPLLQ--DGEHDLEGMLNAIDE------KTTIVW 160 (363)
T ss_dssp ESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHHHHHHHH-TCEEEEEECCT--TSCCCHHHHHHHCCT------TEEEEE
T ss_pred eCCHHHHHHHHHHHHccCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCCC--CCCcCHHHHHHhccc------CCCEEE
Confidence 999999999999999999999999999999998888877 99999999875 578999999998754 799999
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcC
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD 274 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~ 274 (464)
+++||||||.++|.+++.++++.|++ |+++|+||+|+++.+ +. ..+...... ..+++++++||||.
T Consensus 161 ~~~p~nptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~---~~~~~~~~~---------~~~~~i~~~s~sK~ 226 (363)
T 3ffh_A 161 ICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ---PEKHEKLVR---------TYKNLIITRTFSKI 226 (363)
T ss_dssp EESSCTTTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC---CCCCGGGGG---------TCTTEEEEEESSST
T ss_pred EeCCCCCcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc---ccCHHHHhh---------cCCCEEEEeechhh
Confidence 99999999999999999999998887 999999999998766 32 223333322 34789999999999
Q ss_pred CCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-CCCeee
Q 037587 275 FSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-AGIRCL 353 (464)
Q Consensus 275 ~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~ 353 (464)
+|++|+|+||+++ ++.+.+.+......++++.+.|.++..++++.+ ++++.++.++++++++.+.|++ .|+.+.
T Consensus 227 ~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~~~g~~~~ 301 (363)
T 3ffh_A 227 YGLASARVGYGIA-DKEIIRQLNIVRPPFNTTSIGQKLAIEAIKDQA----FIGECRTSNANGIKQYEAFAKRFEKVKLY 301 (363)
T ss_dssp TCCSSCCCEEEEE-CHHHHHHHHHTCCSCCCBHHHHHHHHHHHHCHH----HHHHHHHHHHHHHHHHHHHHHHCTTCEEC
T ss_pred hcCchhceeeeec-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHhhCCCceEC
Confidence 9999999999999 566666676666667789999999999998653 4778888899999999999999 699988
Q ss_pred cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 354 KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 354 ~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
++.++ |+|++++. ...++...|. ++||.++||..|+. ++++||+++ +++++++++++|+++
T Consensus 302 ~~~~~-~~~~~~~~--------~~~~~~~~l~-~~gi~v~~g~~~~~--~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 302 PANGN-FVLIDLGI--------EAGTIFSYLE-KNGYITRSGAALGF--PTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp CCCSS-EEEEECSS--------CHHHHHHHHH-HTTEECEETTTTTC--TTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CCCCe-EEEEECCC--------CHHHHHHHHH-HCCeEEEeCccCCC--CCeEEEECC--CHHHHHHHHHHHHHh
Confidence 77665 89999874 1234666665 67999999998864 789999998 799999999999876
No 46
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-42 Score=344.06 Aligned_cols=344 Identities=18% Similarity=0.263 Sum_probs=281.6
Q ss_pred hhhcCCCCCCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHc
Q 037587 23 AYENNPYDQLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIR 101 (464)
Q Consensus 23 ~~~~~~y~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 101 (464)
...-.+|.+.. +.++|+|+.|+|+++ ++.+.+++.+.... .....|++ .+..++|++++++++
T Consensus 18 ~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~-~~~~~l~~~la~~~g--- 81 (367)
T 3euc_A 18 VRAMGAYHVPD-SHGLVKLDAMENPYRLPPALRSELAARLGE-----------VALNRYPV-PSSEALRAKLKEVMQ--- 81 (367)
T ss_dssp HHHSCCSSCCC-CTTCEECCSSCCCCCCCHHHHHHHHHHHHH-----------HHTTCSCC-CCHHHHHHHHHHHHT---
T ss_pred HHhCCCCCCCC-CCCeeEccCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCC-CcHHHHHHHHHHHhC---
Confidence 33445677765 568899999999985 46677766664221 13567876 478999999999986
Q ss_pred CCCCCC-CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 102 GNKVKF-DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 102 ~~~~~~-~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
+ ++++|++|+|+++++..++.+++++||+|+++.|+|.++...++.. |++++.+++++ +|.+|++.+++.+
T Consensus 82 -----~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~l 153 (367)
T 3euc_A 82 -----VPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFA-GLEFVGVPLRA--DFTLDRGAMLAAM 153 (367)
T ss_dssp -----CCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTT-TCEEEEEECCT--TSCCCHHHHHHHH
T ss_pred -----CCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHc-CCeEEEecCCC--CCCCCHHHHHHHh
Confidence 4 6789999999999999999999999999999999999998888876 99999999875 6789999999998
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEeccccccccCCCCCCccchhhhhhccCcCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDES 258 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (464)
++. ++++|++++||||||.++|.+++++|+++|+++ |+++|+||+|.++. .. .... ...
T Consensus 154 ~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~--~~--~~~~---~~~------- 214 (367)
T 3euc_A 154 AEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFA--QE--SWMS---RLT------- 214 (367)
T ss_dssp HHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSS--SC--CSGG---GGG-------
T ss_pred hcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhc--cc--chHH---HHh-------
Confidence 753 688999999999999999999999999999999 99999999999753 22 1122 222
Q ss_pred CCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHH
Q 037587 259 DDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRK 338 (464)
Q Consensus 259 ~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (464)
..++++++.||||. +++|+|+||+++ ++.+.+.+......++.+.+.|.++..++++. +++++.++.+++++
T Consensus 215 --~~~~~i~~~s~sK~-~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~ 286 (367)
T 3euc_A 215 --DFGNLLVMRTVSKL-GLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEHV----AVLDEQAAQLRAER 286 (367)
T ss_dssp --TCTTEEEEEECCCT-TSCSCCEEEEEE-CHHHHHHHGGGCCSSCCCHHHHHHHHHHHTTH----HHHHHHHHHHHHHH
T ss_pred --hCCCEEEEecchhh-cccccCceeeee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHH
Confidence 34789999999999 899999999999 55566666666666678999999999999873 34778888899999
Q ss_pred HHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHH
Q 037587 339 EMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEET 417 (464)
Q Consensus 339 ~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~ 417 (464)
+.+.+.|+++ |+.+.++.+ +|+|++++. ..++...+ .++||.++||..|+...++++||+++ ++++
T Consensus 287 ~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~---------~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~ 353 (367)
T 3euc_A 287 SRVAEGMAAHGGVTVFPSAA-NFLLARVPD---------AAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS--TPEE 353 (367)
T ss_dssp HHHHHHHHTSTTCEECCCSS-SEEEEECSC---------HHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC--CHHH
T ss_pred HHHHHHHHhCCCcEECCCCC-eEEEEECCC---------HHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC--CHHH
Confidence 9999999998 888766554 589999871 12455555 67899999999887666789999998 7999
Q ss_pred HHHHHHHHHHHHH
Q 037587 418 LQVALQRIKVFAQ 430 (464)
Q Consensus 418 l~~~l~~l~~~l~ 430 (464)
+++++++|+++++
T Consensus 354 i~~~~~~l~~~l~ 366 (367)
T 3euc_A 354 NAQFLEAFAASLQ 366 (367)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998763
No 47
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=2e-43 Score=350.15 Aligned_cols=338 Identities=22% Similarity=0.385 Sum_probs=274.6
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.++++ ++.+.+++.+... .....|++..|..++|+++++++++.++ +++++++|+
T Consensus 28 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~ 93 (370)
T 2z61_A 28 GKKVIHLEIGEPDFNTPKPIVDEGIKSLK------------EGKTHYTDSRGILELREKISELYKDKYK--ADIIPDNII 93 (370)
T ss_dssp TCCCEECCCCSCSSCCCHHHHHHHHHHHH------------TTCCSCCCTTCCHHHHHHHHHHHHHHSS--CCCCGGGEE
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHH------------cCccCCCCCCCCHHHHHHHHHHHHHHhC--CCCChhhEE
Confidence 356799999998764 4666666655321 1235788878899999999999998766 456789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|++++|+|+++...+... |.+++.++ +|+++|++.+++ ++++|
T Consensus 94 ~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~--------~d~~~l~~~l~~------~~~~v 158 (370)
T 2z61_A 94 ITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFL-GAKPVFCD--------FTVESLEEALSD------KTKAI 158 (370)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHT-TCEEEEEC--------SSHHHHHHHCCS------SEEEE
T ss_pred ECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CCEEEEeC--------CCHHHHHHhccc------CceEE
Confidence 9999999999999999999999999999999998888876 99998887 578999887753 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.+++.+ |+++|+++|+++|+||+|.++.+++. +.++..+.. ..+++++++||||
T Consensus 159 ~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~---~~~~~~~~~---------~~~~~i~~~s~sK 222 (370)
T 2z61_A 159 IINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK---CYSAIEFDE---------NLEKTILINGFSK 222 (370)
T ss_dssp EEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC---CCCGGGTCT---------TCSSEEEEEESTT
T ss_pred EEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC---CcCHHHccC---------CCCcEEEEecChh
Confidence 9999999999999977 88899999999999999998766543 234433311 3478999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCC-chhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSD-KKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
.+|++|+|+||+++++ .+.+.+..... .++++++.|.++.++++. . .+++++.++.++++++++.+.|+++|+
T Consensus 223 ~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~ 298 (370)
T 2z61_A 223 LYAMTGWRIGYVISND-EIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKDFGW 298 (370)
T ss_dssp TTTCGGGCCEEEECCH-HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCccceEEEEEECH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999955 55555544332 235788999998888875 2 456788888999999999999998899
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++.++++|+|+|++++. +..+++..+++++||.+.||..|+...++++||+++ .+++++++++++|+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 299 EVNNPIGAYYVFPNIGE--------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp BCCCCCBTTEECCBCSS--------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred eecCCCcceEEEEecCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 88888889999999874 123577777667899999999887544689999999 599999999999998874
No 48
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.2e-43 Score=353.19 Aligned_cols=342 Identities=23% Similarity=0.369 Sum_probs=276.0
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.+.++++ ++.+.+++.+.. .....|++..|..++|++++++++ +++++|++
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~~~~~~~l~~~la~~~~--------~~~~~v~~ 83 (381)
T 1v2d_A 25 LGAVNLGQGFPSNPPPPFLLEAVRRAL-------------GRQDQYAPPAGLPALREALAEEFA--------VEPESVVV 83 (381)
T ss_dssp HTCEECCCCSCSSCCCHHHHHHHHHHT-------------TTSCSCCCTTCCHHHHHHHHHHHT--------SCGGGEEE
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHH-------------HHhcCCCCCCCCHHHHHHHHHhcC--------CChhhEEE
Confidence 35799999998774 466676666531 123468887789999999999975 67889999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC--CCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS--SSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~--~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
|+|+++++..++.+++++||+|++++|+|+.+...++.. |++++.++++ ++ ++.+|++++++.+.+ ++++
T Consensus 84 ~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~-~~~~d~~~l~~~l~~------~~~~ 155 (381)
T 1v2d_A 84 TSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLA-GAKARLVRLDLTPE-GFRLDLSALEKALTP------RTRA 155 (381)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEEETT-EEECCHHHHHTTCCT------TEEE
T ss_pred cCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEEeCCCCCc-cCCcCHHHHHHhcCc------CCEE
Confidence 999999999999999999999999999999999888776 9999999986 32 478999999987743 7899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+ +. ...++..+ . .++++++.|+|
T Consensus 156 v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~--~~~~~~~~-~----------~~~~~~~~s~s 221 (381)
T 1v2d_A 156 LLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GE--RPRRLREF-A----------PERTFTVGSAG 221 (381)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SS--CCCCHHHH-C----------TTTEEEEEEHH
T ss_pred EEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CC--CCCCHHHh-c----------CCCEEEEeech
Confidence 99999999999999999999999999999999999999998766 33 22344443 1 26889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|.+|++|+|+||++++++ +.+.+.... ..++.+++.|.++..+++...+ .+++++.++.++++++++.+.|++.|+
T Consensus 222 K~~~~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~ 299 (381)
T 1v2d_A 222 KRLEATGYRVGWIVGPKE-FMPRLAGMRQWTSFSAPTPLQAGVAEALKLARR-EGFYEALREGYRRRRDLLAGGLRAMGL 299 (381)
T ss_dssp HHTTCGGGCCEEEECCTT-THHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhcCCcccceEEEEeCHH-HHHHHHHHHhhcccCCCcHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 999999999999999654 444443332 2345788899888888875422 445778888999999999999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--CCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--NEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
++.++.+|+|+|++++.. + +..++.++||.++||..|+. ...+++||+++. +++++++++++|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~----------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 300 RVYVPEGTYFLMAELPGW----------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRV 367 (381)
T ss_dssp CEECCSBSSEEEEECTTC----------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHH
T ss_pred EecCCCcceEEEEecChH----------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHH
Confidence 998888889999998742 1 34556788999999998874 246799999997 999999999999999
Q ss_pred HHhhCc
Q 037587 429 AQSCNP 434 (464)
Q Consensus 429 l~~~~~ 434 (464)
+++.+.
T Consensus 368 l~~~r~ 373 (381)
T 1v2d_A 368 VNSPRE 373 (381)
T ss_dssp C-----
T ss_pred Hhhccc
Confidence 877654
No 49
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=7.6e-44 Score=360.61 Aligned_cols=353 Identities=17% Similarity=0.256 Sum_probs=277.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|++|.+.++ ++.+.+++.+..... ........|++..|..+||+++++++.+. +.+++++|+
T Consensus 55 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~~~~~y~~~~g~~~l~~~ia~~~~~~----~~~~~~~i~ 123 (432)
T 3ei9_A 55 DAQVISLGIGDTTEPIPEVITSAMAKKAHEL-------STIEGYSGYGAEQGAKPLRAAIAKTFYGG----LGIGDDDVF 123 (432)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHHHHHT-------TSTTTCCCCCCTTCCHHHHHHHHHHHHTT----TTCCGGGEE
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcc-------cccCCccCCCCCCCCHHHHHHHHHHHHcc----CCCCcceEE
Confidence 357899999988875 466777666643210 00023357888789999999999999742 346789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCC------------cEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
+|+|+++++..+ ..++++||.|++++|+|+++...+... | .+++.++++.++++..+++.
T Consensus 124 ~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 195 (432)
T 3ei9_A 124 VSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------ 195 (432)
T ss_dssp EESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------
T ss_pred ECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHc-CCcccccccccccCceEEeccCcccCCcCChhh------
Confidence 999999999975 778899999999999999988776654 5 36788887755556666443
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
.+++++|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++..+.. .
T Consensus 196 -----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~---~~~~~~~~~---------~ 258 (432)
T 3ei9_A 196 -----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN---PRSIFEIPG---------A 258 (432)
T ss_dssp -----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC---CSSGGGSTT---------G
T ss_pred -----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC---CCChhhcCC---------C
Confidence 13788999999999999999999999999999999999999999998766543 234333311 2
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCHH-------HHHHHHHh--cccCCCChHHHHHHHHHcCCchhhHHHHHHHHH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNER-------VVSAATKM--SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRK 332 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~-------~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~ 332 (464)
.+++++++||||+||++|+|+||++++++. +...+... ..+++++++.|.++.+++.+.. .+++++.++
T Consensus 259 ~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~ 336 (432)
T 3ei9_A 259 EEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEG--LEAMHKVIG 336 (432)
T ss_dssp GGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHH--HHHHHHHHH
T ss_pred CCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhccc--HHHHHHHHH
Confidence 368999999999999999999999997665 14444433 2344578899999999887543 356888899
Q ss_pred HHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec
Q 037587 333 RLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN 412 (464)
Q Consensus 333 ~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~ 412 (464)
.++++++++.+.|+++|+.+.++.+++|+|++++. . ...+++..+++++||.++||..|+..+.+++||+++.
T Consensus 337 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~ 409 (432)
T 3ei9_A 337 FYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPN-Q------SSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG 409 (432)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTT-S------CHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS
T ss_pred HHHHHHHHHHHHHHHCCceecCCCcceEEEEECCC-C------CHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC
Confidence 99999999999999999999887778899999982 1 1235778888888999999999987678999999975
Q ss_pred CCHHHHHHHHHHHHHHHHhhC
Q 037587 413 ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 413 ~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+++++++++++|++--..++
T Consensus 410 -~~e~l~~~l~rl~~~~~~~~ 429 (432)
T 3ei9_A 410 -HRENILEACRRFKQLYKHHH 429 (432)
T ss_dssp -CHHHHHHHHHHHHHHHTTSC
T ss_pred -CHHHHHHHHHHHHHHhhhcc
Confidence 89999999999998665544
No 50
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2e-42 Score=347.27 Aligned_cols=359 Identities=17% Similarity=0.288 Sum_probs=282.6
Q ss_pred ceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 37 GIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 37 ~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
++|||+.+.+.. +++.+.+++.+.... . ..... |++..|..++|+++|+++.+.+| +++++++|+
T Consensus 35 ~~idl~~g~~~~~~~~~~~v~~a~~~~~~~------~---~~~~~-y~~~~~~~~l~~~la~~~~~~~g--~~~~~~~v~ 102 (407)
T 2zc0_A 35 KLISLAAGDPDPELIPRAVLGEIAKEVLEK------E---PKSVM-YTPANGIPELREELAAFLKKYDH--LEVSPENIV 102 (407)
T ss_dssp CCEECCSCCCCTTTSCHHHHHHHHHHHHHH------C---GGGGS-CCCTTCCHHHHHHHHHHHHHHSC--CCCCGGGEE
T ss_pred ceEeCCCCCCCchhCCHHHHHHHHHHHHhh------c---ccccc-CCCCCCCHHHHHHHHHHHHHhcC--CCCCcceEE
Confidence 679998876432 566677766654221 0 01234 88888899999999999987665 446788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++.+++ .+|++.|++.++.....+.++++|
T Consensus 103 ~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v 178 (407)
T 2zc0_A 103 ITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL-GAKIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLI 178 (407)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-TCEEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEE
T ss_pred EecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHc-CCEEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEE
Confidence 9999999999999999999999999999999998888766 999999998643 389999999887322122468887
Q ss_pred -EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 194 -LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 194 -il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+. ..+++++++|||
T Consensus 179 ~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~----------~~~~~i~~~s~s 246 (407)
T 2zc0_A 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGG--DIVPLKALD----------NEGRVIVAGTLS 246 (407)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCS--SCCCGGGGC----------SSCCEEEEEEST
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCC--CCCChhhcC----------CCCCEEEEcccc
Confidence 4789999999999999999999999999999999999998766544 334444431 225889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhH-HHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTC-NYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
|.+| +|+|+||++++ +.+.+.+...... +..+++.|.++..+++...+ . +++++.++.++++++.+.+.|++.
T Consensus 247 K~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 323 (407)
T 2zc0_A 247 KVLG-TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKRDIMLKALENHL 323 (407)
T ss_dssp TTTC-TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred cccC-CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999 99999999995 5565555544332 23678999999999987643 4 567788888999999999999874
Q ss_pred -CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHHH
Q 037587 349 -GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETLQVALQRI 425 (464)
Q Consensus 349 -g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~l~~l 425 (464)
++.+..+.+|+|+|++++.... ..+++..+++++||.+.||..|+.. .++++||+++..+++++++++++|
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l 397 (407)
T 2zc0_A 324 PNAEFTKPIAGMFVMFFLPEGAD------GISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397 (407)
T ss_dssp TTSCBCCCSBSSEEEEECSTTCC------HHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHH
T ss_pred CCCEEecCCCcEEEEEEcCCCCC------HHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 6777777888999999975221 2357777765559999999988653 467999999866789999999999
Q ss_pred HHHHHhh
Q 037587 426 KVFAQSC 432 (464)
Q Consensus 426 ~~~l~~~ 432 (464)
++++++.
T Consensus 398 ~~~l~~~ 404 (407)
T 2zc0_A 398 AKLYKEK 404 (407)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 51
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.5e-43 Score=357.34 Aligned_cols=354 Identities=16% Similarity=0.156 Sum_probs=268.3
Q ss_pred ceEEeeccccc---ccH-HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 37 GIIQMGLAENQ---LSF-DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 37 ~~i~l~~~~n~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
++|+|+.|+|+ +++ +.+.+++.+... . ........|++..|.++||++||++++ +++++|
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~----~----~~~~~~~~Y~~~~G~~~lr~~ia~~~~--------~~~~~i 96 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFR----T----KDGVDCRNYGGLLGIADIRELWAEALG--------LPADLV 96 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCCB----C----TTCCBTTSSCCSSCCHHHHHHHHHHHT--------CCGGGE
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHHh----h----ccchhhhCCCCCCCCHHHHHHHHHHhC--------CChhHE
Confidence 47999999986 443 233333322100 0 001235689999999999999999995 688999
Q ss_pred EEeCChHHHH--HHHHHHhcCC------------CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHH
Q 037587 113 VLTAGSTAAN--ETLMFCLADP------------GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALEN 178 (464)
Q Consensus 113 ~it~G~~~al--~~~~~~l~~~------------gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 178 (464)
++|+|+++++ .+++.++..+ +|+|++++|+|+.+...++.. |++++.++++++ .+|++.|++
T Consensus 97 ~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~l~~ 172 (422)
T 3d6k_A 97 VAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHF-GFEMINVPMTDE---GPDMGVVRE 172 (422)
T ss_dssp EECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHH-TCEEEEEEEETT---EECHHHHHH
T ss_pred EEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHc-CCEEEecCCCCC---CCCHHHHHH
Confidence 9999999997 6777777655 347999999999999888877 999999998753 389999998
Q ss_pred HHHHHhhcCCceEEEE-EeCCCCCCCCCCCHHHHHHHHHHHh-hCCeEEEEeccccccccCCCCCCccchhhhhhccCcC
Q 037587 179 AYQQAQTLNLKVKGVL-ITNPSNPLGTAMTHQELNHLINFSK-SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNID 256 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vi-l~~P~NPtG~~~s~~~l~~i~~~~~-~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~ 256 (464)
.+++ .++++|+ +++||||||.++|.+++++|+++|+ ++|+++|+||+|.++.|...+..+.++..+....
T Consensus 173 ~l~~-----~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~--- 244 (422)
T 3d6k_A 173 LVKD-----PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAA--- 244 (422)
T ss_dssp HHTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT---
T ss_pred HHhc-----CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhcc---
Confidence 8752 2688887 6899999999999999999999999 9999999999998643432211234544332110
Q ss_pred CCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCC-chhhHHHHHHHHHH
Q 037587 257 ESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSD-KKFTCNYMKENRKR 333 (464)
Q Consensus 257 ~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~ 333 (464)
+..+++++++||||+ +++|+|+||++++ +.+.+.+...... ++++.++|.++..++++ ..+ .+++++.++.
T Consensus 245 ---~~~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~ 318 (422)
T 3d6k_A 245 ---GNPNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGL-KAHMLKHAAS 318 (422)
T ss_dssp ---TCTTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHH-HHHHHHHHHH
T ss_pred ---CCCCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchH-HHHHHHHHHH
Confidence 134789999999999 6799999999995 4555555444322 45789999999999998 444 6788888999
Q ss_pred HHHHHHHHHHHHHh----CC-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCC-CCCCC---CCCC
Q 037587 334 LRKRKEMLVSGLKV----AG-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPG-SSCHC---NEPG 404 (464)
Q Consensus 334 ~~~~~~~l~~~l~~----~g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg-~~f~~---~~~~ 404 (464)
++++++.+.+.|.+ .| +.+..+++|+|+|++++.. + ..++ ..++.++||.|+|| ..|.. ...+
T Consensus 319 ~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~----~---~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~ 390 (422)
T 3d6k_A 319 LAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG----T---ASRV-VELAKEAGIALTGAGSSFPLHNDPNNE 390 (422)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT----C---HHHH-HHHHHHTTEECCCTTTTSGGGCCTTSC
T ss_pred HHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC----C---HHHH-HHHHHHCCeEEEcCccccCCCCCCCCC
Confidence 99999988888865 33 6767788899999999752 1 1234 44567889999994 44631 1367
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 405 WFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 405 ~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++||+++..+++++++++++|++++++.
T Consensus 391 ~iRis~~~~~~e~i~~~~~~l~~~l~~~ 418 (422)
T 3d6k_A 391 NIRLAPSLPPVAELEVAMDGFATCVLMA 418 (422)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999998568999999999999998764
No 52
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8.7e-43 Score=350.73 Aligned_cols=348 Identities=16% Similarity=0.248 Sum_probs=272.0
Q ss_pred CceEEeecccc-----cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN-----QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|+|+.+.. ++ +++.+.+++.+... .....|++..|.+++|+++++++....+ +.++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~------------~~~~~Y~~~~g~~~lr~~la~~~~~~~~---~~~~ 101 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDR------------SHIASYAPIEGEKDYRKIVIDTLFGPYK---PEGY 101 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCH------------HHHHSCCCTTCCHHHHHHHHHHHHGGGC---CSSE
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCc------------ccccCcCCCCCCHHHHHHHHHHHhcccC---cccc
Confidence 47899999874 44 45667777665311 1345798888999999999999865433 1134
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++|+|+++++..++.+++++||.|++++|+|+.+...+... |++++.+++..+ +|.+|++.|++.+++... ++
T Consensus 102 ~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~--~~ 177 (413)
T 3t18_A 102 ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEF-GRNFKTFEFFTD-DFAFNIDVYKEAIDEGIR--DS 177 (413)
T ss_dssp EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHH-TCEEEEECCBCT-TSSBCHHHHHHHHHHHHH--HC
T ss_pred CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHh-CCeEEEeeccCC-CCCcCHHHHHHHHHHHhh--cC
Confidence 49999999999999999999999999999999999999888877 999999998543 378999999999875211 13
Q ss_pred eE-EEEEeCC-CCCCCCCCCHHHHHHHHHHHh------hCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 190 VK-GVLITNP-SNPLGTAMTHQELNHLINFSK------SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 190 ~~-~vil~~P-~NPtG~~~s~~~l~~i~~~~~------~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
++ ++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.++.+.+. ...++.....++
T Consensus 178 ~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~-------- 247 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD--QQRKFFEKFSNL-------- 247 (413)
T ss_dssp SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS--TTTGGGGGGTTC--------
T ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh--hHHHHHHHHhhc--------
Confidence 55 7888999 999999999999999999999 89999999999998776654 334443333322
Q ss_pred CCc--EEEEcCCCcCCCCCccEEEEEEec--CHHHHHHHHHhc------ccCCCChHHHHHHHHHcCCchh--hHHHHHH
Q 037587 262 WSR--IHIVYSLSKDFSMPGFRVGMIYSN--NERVVSAATKMS------SFGLVSSQTQYLLSRMLSDKKF--TCNYMKE 329 (464)
Q Consensus 262 ~~~--vi~l~S~SK~~g~~GlRiG~l~~~--~~~~~~~~~~~~------~~~~~s~~~q~~~~~~l~~~~~--~~~~~~~ 329 (464)
.++ +++++||||.||++|+|+||++++ ++.+.+.+.... .+..++.++|.++..++++.++ ..++.++
T Consensus 248 ~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 327 (413)
T 3t18_A 248 PRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVD 327 (413)
T ss_dssp CTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHH
Confidence 234 588999999999999999999982 445555444332 2245788999999999988752 1456677
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
.++.++++++.+.+.|++.|+++.++++|+|+|+++.. ..+++..+ .++||.++|| ++++||+
T Consensus 328 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~l-~~~gv~v~~g-------~~~iRis 390 (413)
T 3t18_A 328 LRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPTDK---------AFDIVKDL-EKENIFTIPS-------AKGIRVA 390 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEECSC---------HHHHHHHH-HHTTEECEEC-------SSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCCCC---------HHHHHHHH-HhCCEEEecC-------CCceEEE
Confidence 88899999999999999999999999999999998732 22466554 6789999997 4689999
Q ss_pred eecCCHHHHHHHHHHHHHHHHhh
Q 037587 410 FANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 410 ~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++..+++++ +++|.+++++.
T Consensus 391 ~~~~~~~~~---l~~l~~~l~~~ 410 (413)
T 3t18_A 391 ICGVGEEKI---PKLVQRLAFYT 410 (413)
T ss_dssp TTTSCGGGH---HHHHHHHHHHH
T ss_pred EeeCCHHHH---HHHHHHHHHHH
Confidence 987566666 88888887764
No 53
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2e-43 Score=356.25 Aligned_cols=346 Identities=16% Similarity=0.213 Sum_probs=271.5
Q ss_pred CceEEeeccc---cccc---HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAE---NQLS---FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~---n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|+|+.+. +..+ ++.+.+++.+.... .....|++..|.+++|+++++++....+ ..+++
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 115 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEA-----------GLPRGYLPIDGIAAYDASVQKLLLGDDS--PLIAA 115 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhcc-----------CCCCCCCCCCCcHHHHHHHHHHhcCCCc--ccccc
Confidence 4789999993 3332 26677766654211 2345798889999999999999974322 12367
Q ss_pred C--cEEEeCChHHHHHHH--HHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 N--KLVLTAGSTAANETL--MFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~--~i~it~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
+ +|++|+|+++++..+ +.+++++||+|++++|+|.++...+... |.+++.+++..++++.+|++.+++.+++
T Consensus 116 ~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 191 (420)
T 4f4e_A 116 GRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMA-GFEVVAYPYYDAKTNGVNFDGMLAALNG--- 191 (420)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHT-TCCEEEEECEETTTTEECHHHHHHHHTT---
T ss_pred CceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEeeeeccccCccCHHHHHHHHHh---
Confidence 7 899999999999999 4466899999999999999998888877 9999999984345688999999998863
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++... ...++..+.. ..+++
T Consensus 192 ~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~-~~~~~~~~~~---------~~~~~ 261 (420)
T 4f4e_A 192 YEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEA-DAAAVRLFAA---------ANLNV 261 (420)
T ss_dssp CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTG-GGHHHHHHHH---------TTCCE
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcch-hhHHHHHHHh---------cCCCE
Confidence 1236788999999999999999999999999999999999999999998776420 2344444433 34789
Q ss_pred EEEcCCCcCCCCCccEEEEEEe--cCHHHHHH----HHHh--cccCCCChHHHHHHHHHcCCchhh---HHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYS--NNERVVSA----ATKM--SSFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRKRL 334 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~--~~~~~~~~----~~~~--~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~ 334 (464)
++++||||.||++|+|+||+++ +++.+... ++.. ..+..++.+.|.++..++.+..+. .+++++.++.+
T Consensus 262 i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 341 (420)
T 4f4e_A 262 FVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDRI 341 (420)
T ss_dssp EEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864 34443322 2221 233456789999999999886531 56688899999
Q ss_pred HHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe
Q 037587 335 RKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF 410 (464)
Q Consensus 335 ~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~ 410 (464)
+++++.+.+.|+++ |+.+..+++|+|+|++++. +.+..+++++||.+.|+ .||++
T Consensus 342 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gI~v~~~----------~Ris~ 400 (420)
T 4f4e_A 342 RAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTS-----------AQVDRLREEFGIYAVST----------GRICV 400 (420)
T ss_dssp HHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------SEEEG
T ss_pred HHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEE
Confidence 99999999999987 7788888999999988752 24566677889999975 29999
Q ss_pred ecCCHHHHHHHHHHHHHHH
Q 037587 411 ANITEETLQVALQRIKVFA 429 (464)
Q Consensus 411 ~~~~~e~l~~~l~~l~~~l 429 (464)
+..+++++++++++|++++
T Consensus 401 ~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 401 AALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp GGCCTTTHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHh
Confidence 8768888999999999876
No 54
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.2e-42 Score=347.84 Aligned_cols=351 Identities=17% Similarity=0.296 Sum_probs=278.2
Q ss_pred CceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 36 SGIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
.++|+|+.+.... +++.+.+++.+..... ......|++..|..++|++++++++ +++++|
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~~~~~l~~~la~~~g--------~~~~~v 94 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREK---------GEVALQYSPTEGYAPLRAFVAEWIG--------VRPEEV 94 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHH---------HHHHTSCCCTTCCHHHHHHHHHHHT--------SCGGGE
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhc---------chhhhCCCCCCCCHHHHHHHHHHhC--------CChhhE
Confidence 4679998765322 5666777766543210 0124578887789999999999995 578899
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.++.+++ .+|+++|++.+++ .++++
T Consensus 95 ~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~---~~d~~~l~~~l~~-----~~~~~ 165 (397)
T 2zyj_A 95 LITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQ-GPRFLTVPAGEE---GPDLDALEEVLKR-----ERPRF 165 (397)
T ss_dssp EEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTT-CCEEEEEEEETT---EECHHHHHHHHHH-----CCCSC
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHc-CCEEEecCcCCC---CCCHHHHHHHHhh-----cCCeE
Confidence 99999999999999999999999999999999998888876 999999998643 3899999998874 25777
Q ss_pred E-EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 193 V-LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 193 v-il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
| ++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+. ..+++++++|+
T Consensus 166 v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~-------~~~~~i~~~s~ 236 (397)
T 2zyj_A 166 LYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA--RLPSLFELAREA-------GYPGVIYLGSF 236 (397)
T ss_dssp EEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC--CCCCHHHHHHHH-------TCCCEEEEEES
T ss_pred EEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC--CCCchhhhCccc-------CCCeEEEEecc
Confidence 7 5789999999999999999999999999999999999998776554 334555442210 01578999999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA- 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 348 (464)
||.+| +|+|+||++++ +.+.+.+..... .++++++.|.++..++++..+ +++++.++.++++++.+.+.|++.
T Consensus 237 sK~~~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~ 312 (397)
T 2zyj_A 237 SKVLS-PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFS--ERLERVRRVYREKAQAMLHALDREV 312 (397)
T ss_dssp TTTTC-GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHH--HHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccc-ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999 99999999995 555555543322 234688999999999987643 568888899999999999999885
Q ss_pred --CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--CCCeEEEEeecCCHHHHHHHHHH
Q 037587 349 --GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--EPGWFRICFANITEETLQVALQR 424 (464)
Q Consensus 349 --g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--~~~~~Ris~~~~~~e~l~~~l~~ 424 (464)
|+.+..+.+|+|+|++++.... ..+++..++ ++||.+.||..|+.. .++++||+++..+++++++++++
T Consensus 313 ~~g~~~~~~~~g~~~~~~~~~~~~------~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~ 385 (397)
T 2zyj_A 313 PKEVRYTRPKGGMFVWMELPKGLS------AEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRR 385 (397)
T ss_dssp CTTSEECCCSBSSEEEEECSTTCC------HHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHH
T ss_pred CCCeEEccCCccEEEEEEcCCCCC------HHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHH
Confidence 7888777888999999975221 235777776 459999999988643 46799999987679999999999
Q ss_pred HHHHHHhh
Q 037587 425 IKVFAQSC 432 (464)
Q Consensus 425 l~~~l~~~ 432 (464)
|++++++.
T Consensus 386 l~~~l~~~ 393 (397)
T 2zyj_A 386 LGRALKGL 393 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 55
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.9e-43 Score=351.07 Aligned_cols=351 Identities=21% Similarity=0.341 Sum_probs=282.7
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|+|+.+.+.++ ++.+.+++ +... .....|++..|..++|+++++++++.++ +++++++|+
T Consensus 42 g~~~i~l~~~~~~~~~~~~v~~a~-~~l~------------~~~~~y~~~~g~~~l~~~la~~~~~~~g--~~~~~~~v~ 106 (409)
T 2gb3_A 42 GVRIHHLNIGQPDLKTPEVFFERI-YENK------------PEVVYYSHSAGIWELREAFASYYKRRQR--VDVKPENVL 106 (409)
T ss_dssp TCEEEECSSCCCCSCCCTHHHHHH-HHTC------------CSSCCCCCTTCCHHHHHHHHHHHHHTSC--CCCCGGGEE
T ss_pred CCCEEeccCCCCCCCCCHHHHHHH-HHHh------------cCCCCCCCCCCcHHHHHHHHHHHHHHhC--CCCCHHHEE
Confidence 357899999998764 45566665 4311 1235788878899999999999997665 446788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.+++++||+|+++.|+|+++...+... |++++.++.+++++|.+ ++.|++.+++ ++++|
T Consensus 107 ~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~-~~~l~~~l~~------~~~~v 178 (409)
T 2gb3_A 107 VTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIA-GVKLIPVTRRMEEGFAI-PQNLESFINE------RTKGI 178 (409)
T ss_dssp EESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHH-TCEEEEEECCGGGTSCC-CTTGGGGCCT------TEEEE
T ss_pred EeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHc-CCEEEEeccCCCCCCcc-HHHHHHhhCc------CCeEE
Confidence 9999999999999999999999999999999998888776 99999999875445665 7888877643 78999
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. +.+. +.+ ..+++++++||||
T Consensus 179 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~---~~~~---~~~--------~~~~~i~~~s~sK 244 (409)
T 2gb3_A 179 VLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE---FASA---LSI--------ESDKVVVIDSVSK 244 (409)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC---CCCG---GGS--------CCTTEEEEEESTT
T ss_pred EECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC---CCCc---ccc--------CCCCEEEEecchh
Confidence 9999999999999999999999999999999999999998766443 1232 111 1267899999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC 352 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 352 (464)
.+|++|+|+||++++++.+.+.+......+ +++.+.|.++.++++.. .+++++.++.++++++.+.+.|+++|+++
T Consensus 245 ~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 321 (409)
T 2gb3_A 245 KFSACGARVGCLITRNEELISHAMKLAQGRLAPPLLEQIGSVGLLNLD---DSFFDFVRETYRERVETVLKKLEEHGLKR 321 (409)
T ss_dssp TTTCGGGCCEEEECSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccCCccceEEEEEECcHHHHHHHHHHHhccCCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHcCcee
Confidence 999999999999997735555555444333 67889999999998753 45678888889999999999999888888
Q ss_pred -ecCCccEEEEEecCcccccCChhHHHHHHHHHHHh-----cCeEEeCCCCCCC---CCCCeEEEEeecCCHHHHHHHHH
Q 037587 353 -LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFE-----VGLNISPGSSCHC---NEPGWFRICFANITEETLQVALQ 423 (464)
Q Consensus 353 -~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~-----~gI~v~pg~~f~~---~~~~~~Ris~~~~~~e~l~~~l~ 423 (464)
..+.+|+|+|++++ .. +..+++..++++ +||.+.||..|+. ..++++||+++ .++++++++++
T Consensus 322 ~~~~~~~~~~~~~~~-~~------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~ 393 (409)
T 2gb3_A 322 FTKPSGAFYITAELP-VE------DAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAID 393 (409)
T ss_dssp BCCCSBSSEEEEECS-SS------CHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHH
T ss_pred eeCCCeeEEEEEEeC-CC------CHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHH
Confidence 77888999999987 11 123577777655 5999999988864 23679999999 69999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++.+
T Consensus 394 ~l~~~l~~~~ 403 (409)
T 2gb3_A 394 VLMEGLKMFC 403 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 56
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2e-42 Score=342.15 Aligned_cols=335 Identities=16% Similarity=0.227 Sum_probs=265.4
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
+.++|||+.++|+++ ++.+.+++.+.. .....|++. |..++|+++|++++ +++++|+
T Consensus 23 ~~~~idl~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~~-~~~~l~~~la~~~~--------~~~~~v~ 80 (364)
T 1lc5_A 23 PDQLLDFSANINPLGMPVSVKRALIDNL-------------DCIERYPDA-DYFHLHQALARHHQ--------VPASWIL 80 (364)
T ss_dssp GGGSEECSSCCCTTCCCHHHHHHHHHTG-------------GGGGSCCCT-TCHHHHHHHHHHHT--------SCGGGEE
T ss_pred ccceEEeccccCCCCCCHHHHHHHHHHH-------------HHhhcCCCC-CHHHHHHHHHHHHC--------cCHHHEE
Confidence 456899999998774 466667666541 234678764 78999999999985 6788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
+|+|+++++..++.++ +||+|+++.|+|+++...+... |.+++.++.++++++.+ ++.+.+.+ .+++++|
T Consensus 81 ~~~g~~~al~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~-g~~~~~v~~~~~~~~~~-l~~~~~~~------~~~~~~v 150 (364)
T 1lc5_A 81 AGNGETESIFTVASGL--KPRRAMIVTPGFAEYGRALAQS-GCEIRRWSLREADGWQL-TDAILEAL------TPDLDCL 150 (364)
T ss_dssp EESSHHHHHHHHHHHH--CCSEEEEEESCCTHHHHHHHHT-TCEEEEEECCGGGTTCC-CTTHHHHC------CTTCCEE
T ss_pred ECCCHHHHHHHHHHHc--CCCeEEEeCCCcHHHHHHHHHc-CCeEEEEeCCcccccch-hHHHHHhc------cCCCCEE
Confidence 9999999999999998 7899999999999998888877 99999999875345544 45444433 2367889
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++. +...+.. ..+++++++||||
T Consensus 151 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-----~~~~~~~---------~~~~~i~~~s~sK 216 (364)
T 1lc5_A 151 FLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHET-----GFIPALK---------DNPHIWVLRSLTK 216 (364)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCC-----CSGGGCT---------TCTTEEEEEESTT
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCcc-----chhhHhc---------cCCCEEEEEECch
Confidence 9999999999999999999999999999999999999998655422 2222222 3368899999999
Q ss_pred CCCCCccEEEEEE-ecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 274 DFSMPGFRVGMIY-SNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 274 ~~g~~GlRiG~l~-~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
.+|++|+|+||++ + ++.+.+.+......+++++++|.++.+++++.+ ++++.++.++++++.+.+.|+++ |+.
T Consensus 217 ~~~~~G~r~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~~~~~ 291 (364)
T 1lc5_A 217 FYAIPGLRLGYLVNS-DDAAMARMRRQQMPWSVNALAALAGEVALQDSA----WQQATWHWLREEGARFYQALCQLPLLT 291 (364)
T ss_dssp TTTCTTTCCEEEECC-CHHHHHHHHHHSCTTCSCHHHHHHHHHGGGCHH----HHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred hhcCCccceEEEEEC-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 9999999999999 7 555666666655566788999999999998743 57788888999999999999988 888
Q ss_pred eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 352 CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 352 ~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++.+ +|+|++++.. .. +++..++ ++||.++||..|+...++++||+++ +++++++++++|++++++
T Consensus 292 ~~~~~g-~~~~~~~~~~--~~------~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 292 VYPGRA-NYLLLRCERE--DI------DLQRRLL-TQRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTG 359 (364)
T ss_dssp ECCCSS-SEEEEEESCT--TC------CHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC--
T ss_pred ECCCCC-eEEEEECCCc--HH------HHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhc
Confidence 876655 5888888742 11 3666665 6799999999887555789999997 588899999999988765
Q ss_pred h
Q 037587 432 C 432 (464)
Q Consensus 432 ~ 432 (464)
.
T Consensus 360 ~ 360 (364)
T 1lc5_A 360 I 360 (364)
T ss_dssp -
T ss_pred c
Confidence 4
No 57
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.6e-43 Score=354.61 Aligned_cols=347 Identities=14% Similarity=0.175 Sum_probs=268.2
Q ss_pred CceEEeecccc--cccH----HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN--QLSF----DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
+++|+|+.+.. ..++ +.+.+++...... .....|++..|.+++|+++++++++.++ ..+++
T Consensus 28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~ 94 (401)
T 7aat_A 28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK-----------KMDKEYLPIAGLADFTRASAELALGENS--EAFKS 94 (401)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT-----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceeeeeeeEECCCCCEechHHHHHHHHHhccc-----------ccccCCCCCCCCHHHHHHHHHHhcCCCc--ccccc
Confidence 35799999874 2222 3455555443110 2356798888999999999999986544 33568
Q ss_pred CcEEE--eCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 110 NKLVL--TAGSTAANETLMFCLA---DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 110 ~~i~i--t~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
++|++ |+|+++++.+++.++. ++||.|++++|+|..+...++.. |.+++.++++..+++.+|++.+++.+++
T Consensus 95 ~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~-- 171 (401)
T 7aat_A 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDA-GLQLQAYRYYDPKTCSLDFTGAMEDISK-- 171 (401)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTT--
T ss_pred CceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHc-CCeeEeeeeeccccCccCHHHHHHHHHh--
Confidence 99977 9999999998887664 89999999999999999988877 9999999986555788999988888764
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.+....++..+.. ..++
T Consensus 172 -~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~---------~~~~ 241 (401)
T 7aat_A 172 -IPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIE---------QGID 241 (401)
T ss_dssp -SCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHH---------TTCC
T ss_pred -CCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHh---------cCCc
Confidence 234788999999999999999999999999999999999999999998766532001123333322 3478
Q ss_pred EEEEcCCCcCCCCCccEEEEEEe--cCHH----HHHHHHHhc--ccCCCChHHHHHHHHHcCCchhh---HHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYS--NNER----VVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRKR 333 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~--~~~~----~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~ 333 (464)
+++++||||+||++|+|+||+++ .++. +...+.... ...+++.+.|.++..++.++.+. .+++++.++.
T Consensus 242 ~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (401)
T 7aat_A 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADR 321 (401)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 2333 223333221 22346678888888888876442 4557788899
Q ss_pred HHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 334 LRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 334 ~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
++++++++.+.|.++| +.+.++++|+|+|++++. +++..+++++||.+.|+ +||+
T Consensus 322 ~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gi~v~~~----------~Ris 380 (401)
T 7aat_A 322 IISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKP-----------EQVERLTKEFSIYMTKD----------GRIS 380 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCH-----------HHHHHHHHhCCEeccCC----------CeEE
Confidence 9999999999999885 677788999999987752 35577778889999754 6999
Q ss_pred eecCCHHHHHHHHHHHHHHH
Q 037587 410 FANITEETLQVALQRIKVFA 429 (464)
Q Consensus 410 ~~~~~~e~l~~~l~~l~~~l 429 (464)
++..+++++++++++|++++
T Consensus 381 ~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 381 VAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp GGGCCTTTHHHHHHHHHHHH
T ss_pred eccCChhhHHHHHHHHHHHh
Confidence 98767777999999999875
No 58
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.8e-43 Score=352.87 Aligned_cols=350 Identities=19% Similarity=0.275 Sum_probs=265.8
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|+|+.+++.++ ++.+.+++.+..... . .......|++..|..+||+++|+++. +| + +++++|+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-----~--~~~~~~~y~~~~g~~~lr~~la~~l~--~g--~-~~~~~v~ 99 (400)
T 3asa_A 32 QHTVINLSIGDTTQPLNASVAEAFASSIARL-----S--SPTTCRGYGPDFGLPALRQKLSEDFY--RG--F-VDAKEIF 99 (400)
T ss_dssp TSCCEECSSCCCCCCCCHHHHHHHHHHHHHH-----T--SSSCCCCCCCTTCCHHHHHHHHHTTS--TT--S-SCGGGEE
T ss_pred CCceEeccCCCCCCCCCHHHHHHHHHHHhcc-----c--ccccccCCCCCCCCHHHHHHHHHHHH--cC--C-CCHHHEE
Confidence 457899999988764 466666666542210 0 00124568777789999999999963 22 3 5788999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcE-EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVE-IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++..++. ++.+||+|+++.|+|+++...+... |.+ ++.+++++++++..+++.+ +++++
T Consensus 100 ~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~ 166 (400)
T 3asa_A 100 ISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLT-GAKEIIALPCLQENAFFPEFPED-----------THIDI 166 (400)
T ss_dssp EESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHT-TCSEEEEEECCGGGTTCCCCCTT-----------CCCSE
T ss_pred EccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHc-CCcceEecccchhcCcccChhhc-----------cCccE
Confidence 99999999999765 4589999999999999998888776 998 9999987555555554321 27889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. ...++..+.. ..+++++++|||
T Consensus 167 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~---------~~~~~i~~~s~s 235 (400)
T 3asa_A 167 LCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS--LPKSIFEIPD---------ARFCAIEINSFS 235 (400)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT--SCSSGGGSTT---------GGGTEEEEEECC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC--CCCchhhCCC---------CCCceEEEecch
Confidence 99999999999999999999999999999999999999998655432 2233333310 125789999999
Q ss_pred cCCCCCccEEEEEEecCHH-------HHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 273 KDFSMPGFRVGMIYSNNER-------VVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~-------~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
|+||++|+|+||++++++. +...... ...+++++.+.|.++..++++. + +++.++.++++++++.+
T Consensus 236 K~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~----~~~~~~~~~~~~~~l~~ 310 (400)
T 3asa_A 236 KPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-P----QLEAIHYYRENSDLLRK 310 (400)
T ss_dssp GGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-T----TCHHHHHHHHHHHHHHH
T ss_pred hhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-H----HHHHHHHHHHHHHHHHH
Confidence 9999999999999997655 3333322 2234468899999998888754 2 56677888889999999
Q ss_pred HHHhCCCeeecCCccEEEEEe-cCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHH
Q 037587 344 GLKVAGIRCLKSNAGLFCWVD-MRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVAL 422 (464)
Q Consensus 344 ~l~~~g~~~~~~~~g~f~~~~-l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l 422 (464)
.|++.|+++.++.+|+|+|++ ++...... +++..+++++||.+.||..|+...++++||++. .+++++++++
T Consensus 311 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l 383 (400)
T 3asa_A 311 ALLATGFEVFGGEHAPYLWVKPTQANISDR------DLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAAC 383 (400)
T ss_dssp HHHHTTCEEEECSSSSEEEEECCCTTCCTT------THHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHH
T ss_pred HHHHCCCeeeCCCCceEEEEeccCCCCCHH------HHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHH
Confidence 999889998888778899999 77432222 367777777799999999887555789999964 4899999999
Q ss_pred HHHHHHHHhh
Q 037587 423 QRIKVFAQSC 432 (464)
Q Consensus 423 ~~l~~~l~~~ 432 (464)
++|++++++.
T Consensus 384 ~~l~~~~~~~ 393 (400)
T 3asa_A 384 ERLQMAPALQ 393 (400)
T ss_dssp HHHHC-----
T ss_pred HHHHHHHHhh
Confidence 9999988654
No 59
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.3e-42 Score=351.12 Aligned_cols=325 Identities=16% Similarity=0.156 Sum_probs=260.7
Q ss_pred ccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHH--HHHHHHhcC--C----------CCeEEEcCC
Q 037587 76 ELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAAN--ETLMFCLAD--P----------GDAFLLPTP 141 (464)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al--~~~~~~l~~--~----------gd~Vlv~~p 141 (464)
....|++..|.++||++||++++ +++++|++|+|+++++ .+++.+++. + ||+|++++|
T Consensus 70 ~~~~Y~~~~g~~~lr~~ia~~~~--------~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p 141 (427)
T 3ppl_A 70 DVRNYGGLDGIVDIRQIWADLLG--------VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVP 141 (427)
T ss_dssp BTTSSCCSSCCHHHHHHHHHHHT--------SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEES
T ss_pred hhcCCCCCCCcHHHHHHHHHHhC--------CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCC
Confidence 45789998899999999999995 7889999999999999 588888876 6 899999999
Q ss_pred CCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe-CCCCCCCCCCCHHHHHHHHHHH-h
Q 037587 142 YYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT-NPSNPLGTAMTHQELNHLINFS-K 219 (464)
Q Consensus 142 ~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~-~P~NPtG~~~s~~~l~~i~~~~-~ 219 (464)
+|..+...++.. |++++.+|++++ .+|++.|+++++. +++++|+++ +||||||.++|.+++++|+++| +
T Consensus 142 ~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~ 212 (427)
T 3ppl_A 142 GYDRHFSITERF-GFEMISVPMNED---GPDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETA 212 (427)
T ss_dssp CCHHHHHHHHHT-TCEEEEEEEETT---EECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCS
T ss_pred CcHHHHHHHHHc-CCEEEEeCCCCC---CCCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhh
Confidence 999999988877 999999998753 3899999988731 378888755 7899999999999999999999 9
Q ss_pred hCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh
Q 037587 220 SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM 299 (464)
Q Consensus 220 ~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~ 299 (464)
++|++||+||+|.++.|.+.+....++..+.... +..+++++++||||+ +++|+|+||++++ +.+.+.+...
T Consensus 213 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~S~SK~-~~~G~r~G~~~~~-~~l~~~~~~~ 284 (427)
T 3ppl_A 213 APDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAA------GNPNRFWAFTSTSKI-TLAGAGVSFFLTS-AENRKWYTGH 284 (427)
T ss_dssp STTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHT------TCTTSEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHH
T ss_pred cCCCEEEEECCCcccccCCCCCCccchhhhhhcc------CCCCcEEEEechhhc-cCcCccEEEEEcC-HHHHHHHHHH
Confidence 9999999999999877765422233555442110 134789999999999 5799999999995 4455555443
Q ss_pred c--ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeeecCCccEEEEEecCcccccC
Q 037587 300 S--SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-----GIRCLKSNAGLFCWVDMRHLLVSN 372 (464)
Q Consensus 300 ~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----g~~~~~~~~g~f~~~~l~~~~~~~ 372 (464)
. ..+.++++.|.++..++.+...+.+++++.++.++++++.+.+.|.+. ++.+..+++|+|+|++++..
T Consensus 285 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~---- 360 (427)
T 3ppl_A 285 AGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPG---- 360 (427)
T ss_dssp HHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTT----
T ss_pred hhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcc----
Confidence 3 234578899999999999843337788889999999999998888652 47777888999999999853
Q ss_pred ChhHHHHHHHHHHHhcCeEEeC-CCCCCC---CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 373 TFEAEKELWKKIIFEVGLNISP-GSSCHC---NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~p-g~~f~~---~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
...++... +.++||.++| |..|+. ..++++||+++..+++++++++++|++++++..
T Consensus 361 ---~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 361 ---TASRVAEL-AKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp ---CHHHHHHH-HHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred ---hHHHHHHH-HHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12245544 5678999999 444542 246899999987789999999999999987654
No 60
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=8.9e-43 Score=348.57 Aligned_cols=346 Identities=15% Similarity=0.185 Sum_probs=269.9
Q ss_pred CCceEEeeccc---cccc-H--HHHHHHHHh-hhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 35 PSGIIQMGLAE---NQLS-F--DLLESWLAS-NQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 35 ~~~~i~l~~~~---n~~~-~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
..++|+|+.+. +..+ + +.+.+++.+ .... .....|++..|..++|+++++++....+ ..+
T Consensus 25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~ 91 (397)
T 3fsl_A 25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQP-----------HGASLYLPMEGLNCYRHAIAPLLFGADH--PVL 91 (397)
T ss_dssp CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSC-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHH
T ss_pred CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCc-----------cccccCCCCCchHHHHHHHHHHHhcCCc--ccc
Confidence 35789999994 3332 2 566666555 3210 1345798888999999999999975322 123
Q ss_pred CCC--cEEEeCChHHHHHHHH--HHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPN--KLVLTAGSTAANETLM--FCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~--~i~it~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+++ +|++|+|+++++..++ .+++++||+|+++.|+|..+...++.. |.+++.+++..++++.+|++.+++.+++
T Consensus 92 ~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~- 169 (397)
T 3fsl_A 92 KQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGA-GFEVSTYPWYDEATNGVRFNDLLATLKT- 169 (397)
T ss_dssp HTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHT-TCCEEEECCEETTTTEECHHHHHHHHTT-
T ss_pred cccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHc-CCceEEEeeeeccCCcCcHHHHHHHHHh-
Confidence 678 8999999999999995 456799999999999999998888877 9999999984445788999999998863
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
..++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++... ...++..+.. ..+
T Consensus 170 --~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~---------~~~ 237 (397)
T 3fsl_A 170 --LQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEE-DAYAIRAIAS---------AGL 237 (397)
T ss_dssp --CCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTG-GGHHHHHHHH---------TTC
T ss_pred --CCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCccc-ccHHHHHHHh---------cCC
Confidence 1236788899999999999999999999999999999999999999987765310 2344444433 347
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEe--cCHHHHH-HHHHh-----cccCCCChHHHHHHHHHcCCchhh---HHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYS--NNERVVS-AATKM-----SSFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRK 332 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~--~~~~~~~-~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~ 332 (464)
++++++||||+||++|+|+||+++ .+..+.. ..... ..+..++.+.|.++..++.+..+. .+++++.++
T Consensus 238 ~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 317 (397)
T 3fsl_A 238 PALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRT 317 (397)
T ss_dssp CEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred CEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999975 3444332 22222 234446789999999999886431 456788899
Q ss_pred HHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 333 RLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 333 ~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
.++++++.+.+.|+++ |+.+.++++|+|+|++++. +.+..+++++||.+.||. ||
T Consensus 318 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~g~----------Ri 376 (397)
T 3fsl_A 318 RILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSA-----------AQVDRLREEFGVYLIASG----------RM 376 (397)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTTC----------EE
T ss_pred HHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCH-----------HHHHHHHHhCCEEECCCC----------eE
Confidence 9999999999999987 6888888899999988752 245666778999999873 99
Q ss_pred EeecCCHHHHHHHHHHHHHH
Q 037587 409 CFANITEETLQVALQRIKVF 428 (464)
Q Consensus 409 s~~~~~~e~l~~~l~~l~~~ 428 (464)
+++..+++++++++++|+++
T Consensus 377 s~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 377 CVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp EGGGCCTTTHHHHHHHHHHH
T ss_pred EEEecCHhhHHHHHHHHHhh
Confidence 99876788899999999875
No 61
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=6.9e-42 Score=334.39 Aligned_cols=323 Identities=16% Similarity=0.250 Sum_probs=255.8
Q ss_pred CCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 32 LHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 32 ~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
...+.++|+|+.|+|+++ ++.+.+++.+. ......|++ .|..+||+++|++++ ++++
T Consensus 12 ~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~-------------~~~~~~y~~-~~~~~lr~~la~~~~--------~~~~ 69 (337)
T 3p1t_A 12 VRAAAQAVCLAFNENPEAVEPRVQAAIAAA-------------AARINRYPF-DAEPRVMRKLAEHFS--------CPED 69 (337)
T ss_dssp --CCCCCEECSSCCCCSCCCHHHHHHHHHH-------------GGGTTSCCT-THHHHHHHHHHHHHT--------SCGG
T ss_pred ccCCCCceEeeCCCCCCCCCHHHHHHHHHh-------------hhhhccCCC-CchHHHHHHHHHHhC--------cCHH
Confidence 345667899999999986 46777777664 234567864 578999999999986 6788
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|++|+|+++++.+++.++ +||+|+++.|+|..+...++.. |++++.+++++ +|.+|++.+++. .++
T Consensus 70 ~i~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~--------~~~ 136 (337)
T 3p1t_A 70 NLMLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRARIAVS-GLRHFEIGLTD--DLLLDPNDLAQV--------SRD 136 (337)
T ss_dssp GEEEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHHHHTTS-CCEEEEECBCT--TSSBCHHHHTTC--------CTT
T ss_pred HEEEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHHHHHHc-CCEEEEecCCC--CCCCCHHHHHhh--------cCC
Confidence 9999999999999999988 9999999999999999888877 99999999863 578999998764 267
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
+++++++||||||.++|.+++.++++ +++. +|+||+|.++.+... .. . . ..+++++++|
T Consensus 137 ~~v~i~~p~nptG~~~~~~~l~~l~~---~~~~-~ivDea~~~~~~~~~----~~---~-~---------~~~~~i~~~S 195 (337)
T 3p1t_A 137 DCVVLANPSNPTGQALSAGELDQLRQ---RAGK-LLIDETYVDYSSFRA----RG---L-A---------YGENELVFRS 195 (337)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHH---HCSE-EEEECTTGGGSSCSS----SC---C-C---------CBTTEEEEEE
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHH---hCCc-EEEECCChhhccccc----cc---c-c---------cCCCEEEEee
Confidence 89999999999999999888777665 5666 566999997433222 11 0 1 2368899999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI 350 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 350 (464)
|||.||++|+|+||++++ +.+.+.+......++++.+.|.++..++++.++ +.+.++.+.++++.+.+.|+++|+
T Consensus 196 ~sK~~g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~g~ 270 (337)
T 3p1t_A 196 FSKSYGLAGLRLGALFGP-SELIAAMKRKQWFCNVGTLDLHALEAALDNDRA----REAHIAKTLAQRRRVADALRGLGY 270 (337)
T ss_dssp SSSTTCCTTTCCEEEECC-HHHHHHHHTTSCTTCSCHHHHHHHHHHHTCHHH----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CchhccCcchheEEEEeC-HHHHHHHHhhcCCCCCCHHHHHHHHHHhCCHHH----HHHHHHHHHHHHHHHHHHHHHCcC
Confidence 999999999999999994 456666666666667888999999999987543 344555566778889999999999
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+.+++++ |+|+..+.. .++ ..++.++||.++||..|+. ++++||+++ ++++++.++++|+++++
T Consensus 271 ~~~~~~~~-~~~~~~~~~---------~~~-~~~l~~~gi~v~~g~~~~~--~~~iRis~~--~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 271 RVASSEAN-FVLVENAAG---------ERT-LRFLRERGIQVKDAGQFGL--HHHIRISIG--REEDNDRLLAALAEYSD 335 (337)
T ss_dssp CBCCCSSS-EEEEECTTT---------HHH-HHHHHHTTEECEEGGGGTC--CSEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred EECCCCCe-EEEEEcCCH---------HHH-HHHHHHCCeEEEECccCCC--CCeEEEecC--CHHHHHHHHHHHHHHhh
Confidence 98888877 667776531 123 3455678999999998864 689999998 68999999999988753
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-41 Score=335.80 Aligned_cols=334 Identities=18% Similarity=0.310 Sum_probs=269.1
Q ss_pred CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 34 NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
++.++|||+.|+|+++ ++.+.+++.+.. .....|+. .+..++|++++++++ +++++|
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~-------------~~~~~y~~-~~~~~l~~~la~~~~--------~~~~~i 81 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGI-------------KNLGVYPD-VNYRRLNKSIENYLK--------LKDIGI 81 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHH-------------HGGGSCCC-TTCHHHHHHHHHHHT--------CCSCEE
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHH-------------HHhcCCCC-ccHHHHHHHHHHHhC--------CCcceE
Confidence 4667899999999985 466666665531 23457765 578999999999995 678999
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
++|+|+++++..++.++ |+|+++.|+|.++...+... |++++.++++++++ ++++++++.++ ++++
T Consensus 82 ~~~~g~t~al~~~~~~~----d~vi~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--~~~~~l~~~l~-------~~~~ 147 (361)
T 3ftb_A 82 VLGNGASEIIELSISLF----EKILIIVPSYAEYEINAKKH-GVSVVFSYLDENMC--IDYEDIISKID-------DVDS 147 (361)
T ss_dssp EEESSHHHHHHHHHTTC----SEEEEEESCCTHHHHHHHHT-TCEEEEEECCTTSC--CCHHHHHHHTT-------TCSE
T ss_pred EEcCCHHHHHHHHHHHc----CcEEEecCChHHHHHHHHHc-CCeEEEeecCcccC--CCHHHHHHhcc-------CCCE
Confidence 99999999999999887 89999999999999888877 99999999886544 56688887764 2788
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|+++|+++|+||+|.++.++ . . .+...... ..+++++++|+|
T Consensus 148 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~--~-~~~~~~~~---------~~~~~i~~~s~s 214 (361)
T 3ftb_A 148 VIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-P--S-SSFVGEIK---------NYSCLFIIRAMT 214 (361)
T ss_dssp EEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-T--T-SSSGGGTT---------TCSSEEEEEESS
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-c--c-cchhHhcc---------cCCCEEEEeeCh
Confidence 999999999999999999999999999999999999999987665 2 1 23223322 347889999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR 351 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 351 (464)
|.+|++|+|+||++..++.+.+.+......++.+++.|.++..++++. +++++.++.++++++.+.+.|+++ ++.
T Consensus 215 K~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 215 KFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAINCLKDT----NYIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp STTSCGGGCCEEEEESCHHHHHHHHTTSCTTCSCHHHHHHHHHTSSCH----HHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred hhcCCCCcceeEEEeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999994466677777766666778999999999999974 457888889999999999999988 787
Q ss_pred -eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 352 -CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 352 -~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+.++.++ |+|++++. . +..+++..|+ ++||.++||..|+...++++||+++ ++++++.+++.|+++.+
T Consensus 291 ~~~~~~~~-~~~~~~~~-~------~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 291 RVFSPHAN-FVLCRLEN-I------SGEKLYDSLL-KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp EEECCSSS-EEEEEESS-S------CHHHHHHHHH-TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred eecCCCCe-EEEEEcCC-C------CHHHHHHHHH-HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 7777765 78898875 1 1235667765 5699999999998766889999998 67888888888887765
Q ss_pred h
Q 037587 431 S 431 (464)
Q Consensus 431 ~ 431 (464)
.
T Consensus 360 ~ 360 (361)
T 3ftb_A 360 N 360 (361)
T ss_dssp T
T ss_pred c
Confidence 3
No 63
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.1e-42 Score=360.39 Aligned_cols=356 Identities=20% Similarity=0.291 Sum_probs=276.0
Q ss_pred ceEEeecccccccHHH-HHHHHHhhhhhHHhhhcccccccccccCC-CCCCcHHHHHHHHHHHHHHcCCCCCCC-CCcEE
Q 037587 37 GIIQMGLAENQLSFDL-LESWLASNQEAVELKRNGESLFRELALFQ-DYHGFPDAKKELVKLMARIRGNKVKFD-PNKLV 113 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~-~~~i~ 113 (464)
++|+|+.+.+.++++. +.++.+.. .. ..|+ +..|.+++|+++++++.+.++.++.+. +++|+
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~--------------~~-~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~ 168 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGA--------------VA-NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLF 168 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHH--------------HT-CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEE
T ss_pred hheeccCCCCCcCCcHHHHHHHHHH--------------Hh-CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEE
Confidence 4688998888776543 33333321 11 3455 667899999999999966523112233 47999
Q ss_pred EeCChHHHHHHHHHH-----hcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC--CCCcccCHHHHHHHHHHHhhc
Q 037587 114 LTAGSTAANETLMFC-----LADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS--SNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 114 it~G~~~al~~~~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~--~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+|+|+++++..++.+ ++++||.|+++.|+|..+...+... |.+++.++++. +++|.+|++.|++.+.+
T Consensus 169 ~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~---- 243 (533)
T 3f6t_A 169 PTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELK-DYELVEVDLHSYEKNDWEIEPNEIEKLKDP---- 243 (533)
T ss_dssp EEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGG-GSEEEEECCCEETTTTSEECHHHHHHHSCT----
T ss_pred EECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHc-CCeEEEEEecCCcccCCCCCHHHHHHHhCC----
Confidence 999999999999998 7899999999999999998888876 99999998864 56789999999988753
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHh-hCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSK-SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~-~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|++++||||||.++|.+++++|+++|+ ++|+++|+||+|.++.++. .++.... .+++
T Consensus 244 --~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~-----~~~~~~~-----------~~~~ 305 (533)
T 3f6t_A 244 --SIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF-----KSIYSVV-----------PYNT 305 (533)
T ss_dssp --TEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC-----CCHHHHS-----------GGGE
T ss_pred --CCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc-----cCHhhcC-----------CCCE
Confidence 8999999999999999999999999999999 6899999999999865532 3444332 2689
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHH------------------------------------HHhc--ccCCCCh
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAA------------------------------------TKMS--SFGLVSS 307 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~------------------------------------~~~~--~~~~~s~ 307 (464)
++++||||.||++|+|+||++++++.+.+.+ .... ...+.+.
T Consensus 306 i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~ 385 (533)
T 3f6t_A 306 MLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLST 385 (533)
T ss_dssp EEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCH
T ss_pred EEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCCh
Confidence 9999999999999999999999765222211 1111 1234677
Q ss_pred HHHHH----HHHHcCC----chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC-C--h--
Q 037587 308 QTQYL----LSRMLSD----KKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN-T--F-- 374 (464)
Q Consensus 308 ~~q~~----~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~-~--~-- 374 (464)
+.|.+ +..++.. ..+ .+++++.++.++++++.+.+.|. .++.+.++++|+|+|++++...... . +
T Consensus 386 ~~q~a~a~~a~~~L~~~~g~~~~-~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~~~g~~~~~~l~~~~~~~~g~~~~~ 463 (533)
T 3f6t_A 386 PQQIMEALFSMTHLLTSTNGGSD-DPYIDIARKLVSERYDQLHDAMQ-APKDETDTNTHYYSLIDIYRLAEKIYGKEFRD 463 (533)
T ss_dssp HHHHHHHHHHHHHHTTCBGGGTB-CHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTTBCCSEEEEEHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccccch-HHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEehHhhhhhccchHHHH
Confidence 78877 3445541 223 57788999999999999999998 8888888999999999987421100 0 0
Q ss_pred -----hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 375 -----EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 -----~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
....+++..+++++||.+.||+.|+. .++++||+++..+++++++++++|+++++++.
T Consensus 464 ~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~-~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~ 526 (533)
T 3f6t_A 464 YLTNNFEQVDFLLKLAEKNGVVLVDGVGFGA-KPGELRVSQANLPTEDYALIGKQVLELLKEYY 526 (533)
T ss_dssp HHHHHCCHHHHHHHHHHHTTSSSCTTEEECS-STTEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCHHHHHHHHHHhCCEEEeCCcccCC-CCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 01235777888889999999999986 46799999987789999999999999998764
No 64
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=7.4e-42 Score=336.24 Aligned_cols=329 Identities=19% Similarity=0.245 Sum_probs=260.9
Q ss_pred CCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 35 PSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
..++|||+.|+|+++ ++.+.+++.+. +.....|++..+ .++|+++|++++ +++++|+
T Consensus 14 g~~~id~~~~~~~~~~~~~v~~a~~~~-------------~~~~~~y~~~~~-~~lr~~la~~~~--------~~~~~i~ 71 (350)
T 3fkd_A 14 SSEIVNFSTTVWTDGDKDHLEKHLVEN-------------LNCIRHYPEPDA-GTLRQMLAKRNS--------VDNNAIL 71 (350)
T ss_dssp --CCEECSCCSCCCSCCHHHHHHHHHT-------------GGGGGSCCCTTC-HHHHHHHHHHTT--------CCGGGEE
T ss_pred cccEEEccCCCCCCCCCHHHHHHHHHh-------------HhHHhcCCCCcH-HHHHHHHHHHhC--------cCHHHEE
Confidence 367899999999986 46666666553 234567888776 999999999985 6789999
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec-CCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC-SSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+|+|+++++.+++.++. ||+|+++.|+|..+...++.. |++++.+++ ++.+++. + +++++
T Consensus 72 ~t~g~~~al~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~--~--------------~~~~~ 132 (350)
T 3fkd_A 72 VTNGPTAAFYQIAQAFR--GSRSLIAIPSFAEYEDACRMY-EHEVCFYPSNEDIGEAD--F--------------SNMDF 132 (350)
T ss_dssp EESHHHHHHHHHHHHTT--TCEEEEEESCCHHHHHHHHHT-TCEEEEEETTSCGGGSC--C--------------TTCSE
T ss_pred EcCCHHHHHHHHHHHHC--CCEEEEeCCCcHHHHHHHHHc-CCeEEEEecCCccccCc--c--------------CCCCE
Confidence 99999999999999987 999999999999999888877 999999998 6434433 2 17889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++||||||.++|.+++++|+++|.++ ++|+||+|.++.+.+. . .. .... ..+++++++|||
T Consensus 133 v~i~~p~nptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~--~--~~-~~~~---------~~~~~i~~~S~s 196 (350)
T 3fkd_A 133 CWLCNPNNPDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEV--I--RP-ADIK---------GRKNLVMVYSFS 196 (350)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCC--C--CG-GGGT---------TCSSEEEEEESH
T ss_pred EEEeCCCCCcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcc--h--hh-HHhh---------cCCCEEEEecCc
Confidence 99999999999999999999999998765 9999999998655443 1 11 1222 347899999999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCch-hhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKK-FTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
|.+|++|+|+||+++ ++.+.+.+......++++.+.|.++..++++.+ + .++.++.. ++++.+.+.|+++ |+
T Consensus 197 K~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~-~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 197 HAYGIPGLRIGYIVA-NKDFMKRVAAFSTPWAVNALAIEAAKFILIHPAQF----TLPIRKWQ-RNTVDFITALNRLDGV 270 (350)
T ss_dssp HHHSCGGGCCEEEEC-CHHHHHHHHTTCCTTCSCHHHHHHHHHHHHCTTTT----CCCHHHHH-HHHHHHHHHHHHSTTE
T ss_pred hhccCcchheEeEEe-CHHHHHHHHHhCCCCCCCHHHHHHHHHHHhCHHHH----HHHHHHHH-HHHHHHHHHHhcCCCc
Confidence 999999999999999 666777777776667789999999999988765 3 22333333 6778899999888 88
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
.+.++.++ |+|+.++.. ...+++..|++++||.++||..|+...++++||+++ +++++++++++|+++++
T Consensus 271 ~~~~~~~~-~~~~~~~~~-------~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 271 EVHPSGTT-FFLLRLKKG-------TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLE 340 (350)
T ss_dssp EECCCSSS-EEEEEESSS-------CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred EECCCCCc-EEEEECCCC-------CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHH
Confidence 88776665 788888753 123577777755899999999998766889999998 68999999999999988
Q ss_pred hhCccc
Q 037587 431 SCNPQM 436 (464)
Q Consensus 431 ~~~~~~ 436 (464)
+++..+
T Consensus 341 ~~~~~~ 346 (350)
T 3fkd_A 341 KYEGHH 346 (350)
T ss_dssp C-----
T ss_pred Hhcccc
Confidence 776543
No 65
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=5.8e-42 Score=344.54 Aligned_cols=351 Identities=15% Similarity=0.150 Sum_probs=273.2
Q ss_pred CCceEEeecccc------cccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 35 PSGIIQMGLAEN------QLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 35 ~~~~i~l~~~~n------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
..++|+|+.+.. +.+++.+.+++.+.... ......|.+..|..++|+++++++...++ ..++
T Consensus 29 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~ 96 (412)
T 1ajs_A 29 DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANN----------SSLNHEYLPILGLAEFRTCASRLALGDDS--PALQ 96 (412)
T ss_dssp CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTC----------TTCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCCceeeccceecCCCCCccccHHHHHHHHHhhhC----------hhhccCCCCCCCCHHHHHHHHHHHhcCCC--CccC
Confidence 356899999873 23446777776654200 12345787788999999999999964332 2346
Q ss_pred CCcEEE--eCChHHHHHHHHH--HhcCCC-----CeEEEcCCCCCChhhhcccCCCcE-EEEEecCCCCCcccCHHHHHH
Q 037587 109 PNKLVL--TAGSTAANETLMF--CLADPG-----DAFLLPTPYYPGFDRDLKWRPGVE-IVPIHCSSSNGFRITISALEN 178 (464)
Q Consensus 109 ~~~i~i--t~G~~~al~~~~~--~l~~~g-----d~Vlv~~p~y~~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~l~~ 178 (464)
+++|++ |+|+++++.+++. .++++| |+|+++.|+|+++...+... |++ ++.++++++++|.+|++++++
T Consensus 97 ~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~ 175 (412)
T 1ajs_A 97 EKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTA-GFKDIRSYRYWDTEKRGLDLQGFLS 175 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHT-TCSCEEEEECEETTTTEECHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHc-CCceeEEEeeecCCCCccCHHHHHH
Confidence 889999 9999999999964 456899 99999999999998888877 999 999998544578899999999
Q ss_pred HHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC--CCCCccchhhhhhccCcC
Q 037587 179 AYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS--PSSSFISIMEAVMDRNID 256 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~--~~~~~~~~~~l~~~~~~~ 256 (464)
.+.+. .++++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+.+ . .+.++..+..
T Consensus 176 ~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~--~~~~~~~~~~----- 245 (412)
T 1ajs_A 176 DLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEK--DAWAIRYFVS----- 245 (412)
T ss_dssp HHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHH--HTHHHHHHHH-----
T ss_pred HHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccc--cchHHHHHhc-----
Confidence 88641 2366788889999999999999999999999999999999999999876653 1 1224433322
Q ss_pred CCCCCCCcEEEEcCCCcCCCCCccEEEEEEe---cCHH---HHHHHHH-h-cccCCCChHHHHHHHHHcCCchhh---HH
Q 037587 257 ESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS---NNER---VVSAATK-M-SSFGLVSSQTQYLLSRMLSDKKFT---CN 325 (464)
Q Consensus 257 ~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~---~~~~---~~~~~~~-~-~~~~~~s~~~q~~~~~~l~~~~~~---~~ 325 (464)
..++++++.||||.||++|+|+||+++ +++. +...+.. . ..+..++++.|.++..+|++..+. .+
T Consensus 246 ----~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1ajs_A 246 ----EGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG 321 (412)
T ss_dssp ----TTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred ----cCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHH
Confidence 236899999999999988999999998 4432 3333333 2 233335889999999999886421 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
++++.++.++++++++.+.|++++ +.+..+++|+|+|++++. +++..+++++||.+.|+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~------ 384 (412)
T 1ajs_A 322 NVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNP-----------KQVEYLINQKHIYLLPS------ 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCCH-----------HHHHHHHHTTCEECCTT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCCH-----------HHHHHHHHhCCEEecCC------
Confidence 678889999999999999999886 777788889999987651 35667777899999874
Q ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 402 EPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 ~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+||+++..+++++++++++|++++++.+
T Consensus 385 ----~Ris~~~~~~~~i~~~~~~l~~~l~~~~ 412 (412)
T 1ajs_A 385 ----GRINMCGLTTKNLDYVATSIHEAVTKIQ 412 (412)
T ss_dssp ----SEEEGGGCCTTTHHHHHHHHHHHHHHCC
T ss_pred ----cEEEeeeCCHHHHHHHHHHHHHHHHhcC
Confidence 5999986689999999999999987643
No 66
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=7.2e-42 Score=345.09 Aligned_cols=355 Identities=16% Similarity=0.204 Sum_probs=272.2
Q ss_pred CceEEeeccccc---ccH-HHHHHHHH--hhhhhHHhhhcccccccccccC-CCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 36 SGIIQMGLAENQ---LSF-DLLESWLA--SNQEAVELKRNGESLFRELALF-QDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 36 ~~~i~l~~~~n~---~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.+.|||+.+.+. ++. +.+.+++. +.. ........| ++..|.++||++||++++ ++
T Consensus 25 ~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~Yp~~~~g~~~lr~~ia~~~~--------~~ 86 (423)
T 3ez1_A 25 GLNLNMQRGQPADADFDLSNGLLTVLGAEDVR----------MDGLDLRNYPGGVAGLPSARALFAGYLD--------VK 86 (423)
T ss_dssp TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCE----------ETTEETTSSCSCTTCCHHHHHHHHHHTT--------SC
T ss_pred CceEecCCCCCChHhCCCcHHHHHHHhhhHHh----------hcchhhhCCCCCCCChHHHHHHHHHHhC--------CC
Confidence 467999998766 332 23444332 110 001234689 788899999999999985 68
Q ss_pred CCcEEEeCChHHHHH--HHHHHhcC--C---------CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHH
Q 037587 109 PNKLVLTAGSTAANE--TLMFCLAD--P---------GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISA 175 (464)
Q Consensus 109 ~~~i~it~G~~~al~--~~~~~l~~--~---------gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 175 (464)
+++|++|+|+++++. +++.+++. + ||+|+++.|+|..+...+... |++++.++++.+ .+|++.
T Consensus 87 ~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~v~~~~~---g~d~~~ 162 (423)
T 3ez1_A 87 AENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL-GFELLTVDMQSD---GPDVDA 162 (423)
T ss_dssp GGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH-TCEEEEEEEETT---EECHHH
T ss_pred hhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc-CCEEEeccCCCC---CCCHHH
Confidence 899999999999998 88888887 7 599999999999998888877 999999998753 489999
Q ss_pred HHHHHHHHhhcCCceEEEEE-eCCCCCCCCCCCHHHHHHHHHHH-hhCCeEEEEeccccccccCC-CCCCccchhhhhhc
Q 037587 176 LENAYQQAQTLNLKVKGVLI-TNPSNPLGTAMTHQELNHLINFS-KSKRIHIVSDEIYSGTVFDS-PSSSFISIMEAVMD 252 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil-~~P~NPtG~~~s~~~l~~i~~~~-~~~~~~lI~Deay~~~~~~~-~~~~~~~~~~l~~~ 252 (464)
|++++++ .+++++|++ ++||||||.++|.+++++|+++| +++|+++|+||+|..+.|.. ....+.++..+...
T Consensus 163 l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 238 (423)
T 3ez1_A 163 VERLAGT----DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARD 238 (423)
T ss_dssp HHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHH
T ss_pred HHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhc
Confidence 9998851 237888865 48899999999999999999999 99999999999999765554 21133455544211
Q ss_pred cCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCC--chhhHHHHH
Q 037587 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSD--KKFTCNYMK 328 (464)
Q Consensus 253 ~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~--~~~~~~~~~ 328 (464)
. +..+++++++||||+ +++|+|+||+++++ .+.+.+..... .+.++++.|.++..++.+ ..+ .++++
T Consensus 239 ~------~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~ 309 (423)
T 3ez1_A 239 A------GYPDRAFVFASTSKI-TFAGAGLGFVASSE-DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGL-EGLMR 309 (423)
T ss_dssp H------TCTTSEEEEEESTTT-SCSSSSCEEEEECH-HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHH-HHHHH
T ss_pred c------CCCCeEEEEeCchhh-ccCCcceEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchH-HHHHH
Confidence 1 134789999999999 56999999999954 45555544432 345788999999999887 444 67788
Q ss_pred HHHHHHHHHHHHHHHHHHh----CC--CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC-CCCCCC-
Q 037587 329 ENRKRLRKRKEMLVSGLKV----AG--IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP-GSSCHC- 400 (464)
Q Consensus 329 ~~~~~~~~~~~~l~~~l~~----~g--~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f~~- 400 (464)
+.++.++++++.+.+.|.+ .| +.+..+++|+|+|++++.. . ..++ ..++.++||.++| |..|+.
T Consensus 310 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-~------~~~~-~~~l~~~gv~v~~~g~~~~~~ 381 (423)
T 3ez1_A 310 DHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP-V------ADRV-VKLAEAAGVSLTPAGATYPAG 381 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS-C------HHHH-HHHHHHTTEECCCTTTTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC-c------HHHH-HHHHHHCCcEEecCcccccCC
Confidence 8888888888888777765 44 6777788999999999853 1 1234 4455688999999 666653
Q ss_pred --CCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 401 --NEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 401 --~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++++||+++..+++++++++++|++++++..
T Consensus 382 ~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 382 QDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp CCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 246899999986689999999999999988654
No 67
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=2.6e-43 Score=355.68 Aligned_cols=356 Identities=15% Similarity=0.158 Sum_probs=273.5
Q ss_pred ccccCCCCCccchhhhhhh------cC-----CCCCCCCCCceEEeecccccccH-HHHHHHHHhhhhhHHhhhcccccc
Q 037587 7 SCDSHGQDSSYFLGWEAYE------NN-----PYDQLHNPSGIIQMGLAENQLSF-DLLESWLASNQEAVELKRNGESLF 74 (464)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~------~~-----~y~~~~~~~~~i~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 74 (464)
.|+-|.+ .|+..| .+. .+ +|.+..+++++|+|+.+++.+++ +.+.+++.+... .
T Consensus 19 ~~~~~g~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~l~-----------~ 84 (427)
T 2hox_A 19 NCSEHGR--AFLDGI-ISEGSPKCECNTCYTGPDCSEKIQGCSADVASGDGLFLEEYWKQHKEASAVL-----------V 84 (427)
T ss_dssp CCGGGEE--CCTTSC-EETTEECCEECTTEESTTSCEECTTCCEECCSCCCGGGHHHHTTSHHHHCEE-----------E
T ss_pred ccCcCCc--eeeccc-cccCCcccccccccCCCCCcccCCCceEEecCcCCCCCCCHHHHHhHHhhhh-----------c
Confidence 5777877 677777 444 33 67777788899999999998865 344444443210 0
Q ss_pred cccc--cCCCCC-C---cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh--------cCCCCeEEEcC
Q 037587 75 RELA--LFQDYH-G---FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL--------ADPGDAFLLPT 140 (464)
Q Consensus 75 ~~~~--~Y~~~~-g---~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l--------~~~gd~Vlv~~ 140 (464)
.... .|++.. | .++||++||+++++..+ ..+++++|++|+|+++++.+++.++ +++||.|++++
T Consensus 85 ~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~--~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~ 162 (427)
T 2hox_A 85 SPWHRMSYFFNPVSNFISFELEKTIKELHEVVGN--AAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHA 162 (427)
T ss_dssp CTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTC--BCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECS
T ss_pred CCcccccCCCCCCCccchHHHHHHHHHHHHHhCC--cCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeC
Confidence 1122 498888 8 89999999999997643 4467899999999999999999999 89999999999
Q ss_pred CCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh
Q 037587 141 PYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220 (464)
Q Consensus 141 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~ 220 (464)
|+|+.+...++.. |++++.+ .+|++.|++.+.+ ++++|+++|||||||.+++ +.+ +
T Consensus 163 P~y~~~~~~~~~~-g~~~~~~--------~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~-~~l-------~- 218 (427)
T 2hox_A 163 PFYPVFREQTKYF-DKKGYVW--------AGNAANYVNVSNP------EQYIEMVTSPNNPEGLLRH-AVI-------K- 218 (427)
T ss_dssp SCCHHHHHHHHHS-CBTTEEE--------EEEGGGGTTCSCG------GGEEEEEESSCTTTCCCCC-CSS-------T-
T ss_pred CCcccHHHHHHHc-CCeeeee--------cCCHHHHHHhhcC------CceEEEEcCCCCCcccccH-HHH-------c-
Confidence 9999999888877 8887643 3567777766543 6889999999999999999 422 2
Q ss_pred CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc
Q 037587 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS 300 (464)
Q Consensus 221 ~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~ 300 (464)
++..|.|++|. +.. .++..+ ..+++++++||||.+|++|+|+||++++++.+.+.+.++.
T Consensus 219 -~~~~i~d~~~~----~~~----~s~~~~-----------~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~ 278 (427)
T 2hox_A 219 -GCKSIYDMVYY----WPH----YTPIKY-----------KADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM 278 (427)
T ss_dssp -TCEEEEECTTC----STT----TSCCCS-----------CBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH
T ss_pred -CCCEEEeeccc----CCC----CCcccc-----------CCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHH
Confidence 45567777664 211 232222 1278999999999999999999999996566766666554
Q ss_pred cc--CCCChHHHHHHHHHcCCc-hh-------hHHHHHHHHHHHHHHHHHHHHHHHhC-CCee--------------ecC
Q 037587 301 SF--GLVSSQTQYLLSRMLSDK-KF-------TCNYMKENRKRLRKRKEMLVSGLKVA-GIRC--------------LKS 355 (464)
Q Consensus 301 ~~--~~~s~~~q~~~~~~l~~~-~~-------~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~--------------~~~ 355 (464)
.. +.++.++|.++..+|.+. ++ .++++++.++.++++++.+.+.|++. |+.+ ..+
T Consensus 279 ~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p 358 (427)
T 2hox_A 279 TKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRP 358 (427)
T ss_dssp HHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEEC
T ss_pred HhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCC
Confidence 43 468899999999888864 21 14677888999999999999999987 6554 346
Q ss_pred CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 356 NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 356 ~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++|+|+|++++.. . .+++..+++++||.|+||..|+. ++++||||++. +++++++++++|++++++.
T Consensus 359 ~~g~f~~~~~~~~--~------~~~~~~ll~~~gI~v~pg~~f~~-~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~~ 425 (427)
T 2hox_A 359 PSPSYAWVKCEWE--E------DKDCYQTFQNGRINTQNGVGFEA-SSRYVRLSLIK-TQDDFDQLMYYLKDMVKAK 425 (427)
T ss_dssp CCCSEEEEEECSG--G------GCSHHHHHHHTTEECEEGGGGTS-CTTEEEEECSS-CHHHHHHHHHHHHHHHTCC
T ss_pred CCceEEEEECCCc--H------HHHHHHHHHHCCEEEcCCCccCC-CCCEEEEEecC-CHHHHHHHHHHHHHHHhhc
Confidence 6789999999751 1 13677777788999999999986 67899999996 8999999999999988653
No 68
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=2.1e-45 Score=367.26 Aligned_cols=354 Identities=16% Similarity=0.219 Sum_probs=281.9
Q ss_pred CceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 36 SGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
.++|+|+.+.+.++ ++.+.+++.+... .....|++. ..++|+++++++.+.++ +++++++|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~------------~~~~~y~~~--~~~l~~~la~~l~~~~g--~~~~~~~v~~ 94 (392)
T 3b1d_A 31 PQLLPAWIADMDFEVMPEVKQAIHDYAE------------QLVYGYTYA--SDELLQAVLDWEKSEHQ--YSFDKEDIVF 94 (392)
Confidence 37899999988775 4556666655321 124567765 68999999999987655 3467889999
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC-CCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS-SNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
|+|+++++..++.+++++||+|+++.|+|+.+...+... |.+++.+++++ +++|.+|++.+++.+++ .++++|
T Consensus 95 ~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-----~~~~~v 168 (392)
T 3b1d_A 95 VEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN-NRKLVSNSLKEENGLFQIDFEQLENDIVE-----NDVKLY 168 (392)
Confidence 999999999999999999999999999999998888766 99999998853 33578999999998863 267889
Q ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCc
Q 037587 194 LITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSK 273 (464)
Q Consensus 194 il~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK 273 (464)
++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+.+. .+.++..+..+ ..+++++++||||
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~--------~~~~~i~~~s~sK 238 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGH--EHVSFNTVSPD--------FKDFALVLSSATK 238 (392)
Confidence 9999999999999999999999999999999999999998777554 33444444221 1378999999999
Q ss_pred CCCCCccEEEEEEecCHHHHHHHHHhcccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-C-
Q 037587 274 DFSMPGFRVGMIYSNNERVVSAATKMSSFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-A- 348 (464)
Q Consensus 274 ~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~- 348 (464)
.||++|+|+||++++++.+.+.+......+ ++++++|.++.+++++. .+++++.++.++++++.+.+.|++ +
T Consensus 239 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~ 315 (392)
T 3b1d_A 239 TFNIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG---KPWLVALKAVLEENIQFAVEYFAQEAP 315 (392)
Confidence 999999999999986654555554443332 45778888888888753 345788888899999999999987 4
Q ss_pred CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVF 428 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~ 428 (464)
++.+.++.+|+++|++++... ....+++..+++++||.+.||..|+...++++||+++. +++++++++++|+++
T Consensus 316 ~~~~~~~~~~~~~~i~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 316 RLKVMKPQGTYLIWLDFSDYG-----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCC 389 (392)
Confidence 888888999999999987420 01224667776678999999999975567899999986 789999999999988
Q ss_pred HH
Q 037587 429 AQ 430 (464)
Q Consensus 429 l~ 430 (464)
++
T Consensus 390 l~ 391 (392)
T 3b1d_A 390 LP 391 (392)
Confidence 75
No 69
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.2e-41 Score=342.55 Aligned_cols=354 Identities=18% Similarity=0.277 Sum_probs=262.7
Q ss_pred CceEEeecccccccH---HHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 36 SGIIQMGLAENQLSF---DLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
.++|+|+.+.+...+ +.+.+++.+..... ........|++..|..+||+++|+++.+.+| +++++++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i 101 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESG-------KAADALCNYDGPQGKTALLNALAVLLRETLG--WDIEPQNI 101 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHT-------HHHHHHHSTTCTTSHHHHHHHHHHHHHHHHC--CCCCGGGE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCC-------cccceeeccCCCCCcHHHHHHHHHHHHHHhC--CCCCcccE
Confidence 578999999877643 33444444321110 0001235799989999999999999988776 45788999
Q ss_pred EEeCChHHHHHHHHHHhcCCCC-----eEEEc-CCCCCChhhhccc-----CCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFCLADPGD-----AFLLP-TPYYPGFDRDLKW-----RPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd-----~Vlv~-~p~y~~~~~~~~~-----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
++|+|+++++.+++.+++++|| .|+++ +|+|+.+...+.. ..+..+..++.+ ..+|.+|++.++ +.
T Consensus 102 ~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~l~--~~ 178 (417)
T 3g7q_A 102 ALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEG-QFKYHVDFEHLH--IG 178 (417)
T ss_dssp EEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGG-EEEEECCGGGCC--CC
T ss_pred EEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCc-ccccccCHHHhc--cc
Confidence 9999999999999999999987 89997 9999988765321 114455555432 124678888887 32
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
+++++|++++||||||.++|.+++++|+++|+++|+++|+||+|+.+ +.+. .+.. ..+ +.
T Consensus 179 ------~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~-~~~~--~~~~---~~~--------~~ 238 (417)
T 3g7q_A 179 ------EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVP-FPGI--IFSE---ARP--------LW 238 (417)
T ss_dssp ------TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCC--BCSC---CCC--------CC
T ss_pred ------cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccc-cccc--cccc---ccc--------CC
Confidence 37899999999999999999999999999999999999999999853 2111 1111 111 13
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHH-HHHHHHHHH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKE-NRKRLRKRK 338 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~-~~~~~~~~~ 338 (464)
.++++++.|||| ++++|+|+||++++ +.+.+.+...... ..++++.|.++..++++.++ .++..+ .++.+++++
T Consensus 239 ~~~~i~~~s~sK-~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 315 (417)
T 3g7q_A 239 NPNIILCMSLSK-LGLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRV 315 (417)
T ss_dssp CTTEEEEEESGG-GTCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHH
T ss_pred CCCEEEEEechh-ccCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHH
Confidence 478999999999 67899999999984 5555555444322 34678999999999998876 444544 777888888
Q ss_pred HHHHHHHHhC----CCeeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC-------CCeE
Q 037587 339 EMLVSGLKVA----GIRCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE-------PGWF 406 (464)
Q Consensus 339 ~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~-------~~~~ 406 (464)
+.+.+.|.+. ++.+..+++|+|+|++++.. .. ..+++..+ .++||.++||+.|+... ++++
T Consensus 316 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~i 388 (417)
T 3g7q_A 316 QQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPIT------TELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCM 388 (417)
T ss_dssp HHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSC------HHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEE
T ss_pred HHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCC------HHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeE
Confidence 8888888763 57888889999999999852 11 23466666 57899999999887543 5699
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 407 RICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 407 Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
||+++. +++++++++++|++++++.
T Consensus 389 Ris~~~-~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 389 RMNYVP-EPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp EEESCS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEecC-CHHHHHHHHHHHHHHHHHH
Confidence 999996 9999999999999998765
No 70
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=1.6e-41 Score=341.35 Aligned_cols=349 Identities=15% Similarity=0.195 Sum_probs=266.1
Q ss_pred CceEEeecccc------cccHHHHHHHHHh-hhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 36 SGIIQMGLAEN------QLSFDLLESWLAS-NQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 36 ~~~i~l~~~~n------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.++|+|+.+.. ..+++.+.+++.+ .... .....|++..|..++|+++++++...++ +.++
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~-----------~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~ 95 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS-----------SYNHEYLGITGLPSLTSNAAKIIFGTQS--DALQ 95 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCT-----------TCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHH
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCc-----------ccccCCCCCCCcHHHHHHHHHHHhcCCC--CCCC
Confidence 56799998763 1344666766655 4210 2345788888999999999999975333 3356
Q ss_pred CCcEEE--eCChHHHHHHHH--HHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec-CCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVL--TAGSTAANETLM--FCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC-SSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~i--t~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~ 183 (464)
+++|++ |+|+++++.+++ ..++.+||+|+++.|+|+++...++.. |++++.+++ ++ +++.+|++.+++.+++.
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~ 173 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQ-GLKTATYPYWAN-ETKSLDLNGFLNAIQKA 173 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTT-TCCEEEEECEET-TTTEECHHHHHHHHHHS
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHc-CceEEEEeeecC-CCCccCHHHHHHHHHhC
Confidence 889999 999999999983 444579999999999999999888876 999999998 43 36789999999998751
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
.....++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++....+.++..+... ..+
T Consensus 174 ---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 242 (412)
T 1yaa_A 174 ---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEK--------LST 242 (412)
T ss_dssp ---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHH--------TTT
T ss_pred ---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhc--------CCC
Confidence 112445555999999999999999999999999999999999999987665300011233333221 112
Q ss_pred --cEEEEcCCCcCCCCCccEEEEEE--e----cCHH----HHHHHHH-hc-ccCCCChHHHHHHHHHcCCchhh---HHH
Q 037587 264 --RIHIVYSLSKDFSMPGFRVGMIY--S----NNER----VVSAATK-MS-SFGLVSSQTQYLLSRMLSDKKFT---CNY 326 (464)
Q Consensus 264 --~vi~l~S~SK~~g~~GlRiG~l~--~----~~~~----~~~~~~~-~~-~~~~~s~~~q~~~~~~l~~~~~~---~~~ 326 (464)
++++++||||.||++|+|+||++ + .++. +.+.+.. .. .+..++.+.|.++..++++..+. .++
T Consensus 243 ~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 322 (412)
T 1yaa_A 243 VSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHKD 322 (412)
T ss_dssp TCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999999997899999998 6 2343 4444444 22 33445789999999999887521 457
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC
Q 037587 327 MKENRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNE 402 (464)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~ 402 (464)
+++.++.++++++.+.+.|++++ +++.++++|+|+|+.++. +.+..+++++||.+.|
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gi~v~~-------- 383 (412)
T 1yaa_A 323 MVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTP-----------QMVKRLEETHAVYLVA-------- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCT--------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCH-----------HHHHHHHHhCCEEecc--------
Confidence 88889999999999999999876 888888999999986641 2346677788999986
Q ss_pred CCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 403 PGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 403 ~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++||+++..+++++++++++|+++++.
T Consensus 384 --~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 --SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp --TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred --CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 479999866899999999999998864
No 71
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=7.8e-42 Score=341.62 Aligned_cols=343 Identities=15% Similarity=0.204 Sum_probs=264.5
Q ss_pred CceEEeeccc--cc----ccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAE--NQ----LSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~--n~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|||+.+. ++ .+++.+.+++.+.... .....|.+..|..+||+++++++....+ .++++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~~~--~~~~~ 92 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLEN-----------ETTKNYLGIDGIPEFGRCTQELLFGKGS--ALIND 92 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHH-----------CCCCCCCCTTCCHHHHHHHHHHHHCTTC--HHHHT
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCc-----------ccccCCCCCCCCHHHHHHHHHHHhcCCC--Ccccc
Confidence 4679999997 22 2346677776654211 1345788888999999999999964221 12458
Q ss_pred CcEEE--eCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVL--TAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~i--t~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++|++ |+|+++++..++.++ +.+||+|+++.|+|+++...++.. |.+++.++.++++++.+|++.+++.+++
T Consensus 93 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 168 (396)
T 2q7w_A 93 KRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSA-GLEVREYAYYDAENHTLDFDALINSLNE--- 168 (396)
T ss_dssp TCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHT-TCEEEEEECEETTTTEECHHHHHHHHTT---
T ss_pred ccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHc-CCceEEEecccCCCCCcCHHHHHHHHHh---
Confidence 89998 999999999998766 469999999999999999888877 9999999986445688999999998853
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC-CCCCccchhhhhhccCcCCCCCCCCc
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS-PSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
..++++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++ . ...++..+.. ..++
T Consensus 169 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~---------~~~~ 237 (396)
T 2q7w_A 169 AQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEE--DAEGLRAFAA---------MHKE 237 (396)
T ss_dssp CCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHH--HTHHHHHHHH---------HCSC
T ss_pred CCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccc--hhHHHHHHHh---------cCCc
Confidence 11246778889999999999999999999999999999999999999876642 1 1123333322 1268
Q ss_pred EEEEcCCCcCCCCCccEEEEEEe--cCH----HHHHHHHHh--cccCCCChHHHHHHHHHcCCc----hhhHHHHHHHHH
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYS--NNE----RVVSAATKM--SSFGLVSSQTQYLLSRMLSDK----KFTCNYMKENRK 332 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~--~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~----~~~~~~~~~~~~ 332 (464)
+++++||||.||++|+|+||+++ +++ .+...+... ..+..++++.|.++..++++. .+ .+++++.++
T Consensus 238 ~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~-~~~~~~~~~ 316 (396)
T 2q7w_A 238 LIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIW-EQELTDMRQ 316 (396)
T ss_dssp EEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHH-HHHHHHC-C
T ss_pred EEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHH-HHHHHHHHH
Confidence 99999999999999999999986 333 233333321 233445889999999999886 22 466788889
Q ss_pred HHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEE
Q 037587 333 RLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRI 408 (464)
Q Consensus 333 ~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ri 408 (464)
.++++++.+.+.|++.+ +++.++++|+|+|++++. +.+..+++++||.+.|| +||
T Consensus 317 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~gv~v~~~----------~Ri 375 (396)
T 2q7w_A 317 RIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTK-----------EQVLRLREEFGVYAVAS----------GRV 375 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCH-----------HHHHHHHHhcCeeecCC----------ceE
Confidence 99999999999999987 787788899999987752 24566677889999873 699
Q ss_pred EeecCCHHHHHHHHHHHHHH
Q 037587 409 CFANITEETLQVALQRIKVF 428 (464)
Q Consensus 409 s~~~~~~e~l~~~l~~l~~~ 428 (464)
+++..+++++++++++|+++
T Consensus 376 s~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 376 NVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp EGGGCCTTTHHHHHHHHHHH
T ss_pred EEeecCHHHHHHHHHHHHhc
Confidence 99866899999999999875
No 72
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=9.6e-41 Score=339.01 Aligned_cols=364 Identities=20% Similarity=0.278 Sum_probs=271.5
Q ss_pred CceE-EeecccccccHHH---HHHHHHhhhhhHHhhhcc-c-cc-ccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 36 SGII-QMGLAENQLSFDL---LESWLASNQEAVELKRNG-E-SL-FRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 36 ~~~i-~l~~~~n~~~~~~---~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
+++| +|+.+.+..+++. +.+++.+.... ..++ . .. ......|++..|.++||++||+++++.+| +.++
T Consensus 31 ~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g--~~~~ 105 (444)
T 3if2_A 31 DQPVNMLGGGNPAKIDAVNELFLETYKALGND---NDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYD--WNLT 105 (444)
T ss_dssp SSCCEECSCCCCCCCHHHHHHHHHHHHHHHSC---SCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHC--CCCC
T ss_pred chhhhccCCCCCCcccchHHHHHHHHHHHHhc---cccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcC--CCCC
Confidence 4779 9999977765433 33333322100 0000 0 00 11235799888999999999999988876 4578
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCC--------------eEEEc-CCCCCChhhh------cccCCCcEEEEEecCCCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGD--------------AFLLP-TPYYPGFDRD------LKWRPGVEIVPIHCSSSN 167 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd--------------~Vlv~-~p~y~~~~~~------~~~~~g~~~~~v~~~~~~ 167 (464)
+++|++|+|+++++.+++.+++++|| .|+++ +|+|..+... +... |..++.++.+.++
T Consensus 106 ~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 184 (444)
T 3if2_A 106 SENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAV-LPHIDEVTHDGEE 184 (444)
T ss_dssp GGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEEC-CCEEEEEEETTEE
T ss_pred HHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhcc-CceEEeccccccc
Confidence 89999999999999999999999988 78775 9999988763 3334 8888888876422
Q ss_pred ---CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 168 ---GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 168 ---~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
+|.+|++.|++++... .+++++|++++||||||.++|.+++++|+++|+++|+++|+||+|+.+ +... .+.
T Consensus 185 g~~~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~--~~~ 258 (444)
T 3if2_A 185 GFFKYRVDFEALENLPALK---EGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNI--IYS 258 (444)
T ss_dssp EEEEEECCHHHHHTCHHHH---TTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCC--BCS
T ss_pred CccccCCCHHHHHHHHHhc---CCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc-cccc--ccc
Confidence 3789999999885431 247899999999999999999999999999999999999999999853 2111 111
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCchh
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKKF 322 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~ 322 (464)
. ... +..++++++.||||. +++|+|+||++++ +.+.+.+..... .+..+++.|.++..++.+..+
T Consensus 259 ~---~~~--------~~~~~~i~~~S~sK~-~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 325 (444)
T 3if2_A 259 D---AHL--------NWDNNTILCFSLSKI-GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRI 325 (444)
T ss_dssp C---CCC--------CCCTTEEEEEESTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHH
T ss_pred c---ccc--------cCCCCEEEEechhhc-cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCch
Confidence 1 101 134789999999997 7799999999984 445555544332 245788999999999998776
Q ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcc-cccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 323 TCNYMKE-NRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHL-LVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~-~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
.++..+ .++.++++++.+.+.|.+. ++.+..+.+|+|+|++++.. .. ..+++..+ .++||.++||+
T Consensus 326 -~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~l~~~l-~~~gi~v~~g~ 397 (444)
T 3if2_A 326 -KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPIS------TLDLYERL-KAKGTLIVPSE 397 (444)
T ss_dssp -HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSC------HHHHHHHH-HHTTEECEEGG
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCC------HHHHHHHH-HHCCeEEecch
Confidence 444444 6778888888888887763 56777788999999999752 21 22466665 57899999999
Q ss_pred CCCCCC--------CCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 397 SCHCNE--------PGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 397 ~f~~~~--------~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.|.... .+++||+++. +++++++++++|++++++..
T Consensus 398 ~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~~ 441 (444)
T 3if2_A 398 YFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVRELY 441 (444)
T ss_dssp GSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHHH
Confidence 886432 2689999997 99999999999999987654
No 73
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.5e-41 Score=341.40 Aligned_cols=346 Identities=15% Similarity=0.194 Sum_probs=265.1
Q ss_pred CceEEeecccc-ccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAEN-QLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.++|+|+++.+ .++ ++.+.+++.+.. ......|.+..|.++||+++++++....+ .++++++|.
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~------------~~~~~~y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~ 106 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQAT------------LGTNMDYAPVTGIASFVEEAQKLCFGPTC--AALRDGRIA 106 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCC------------CCSCCCCCCTTCCHHHHHHHHHHHHCSSC--HHHHTTCEE
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcC------------ccccccCCCCCCcHHHHHHHHHHHcCCCc--hhhccCcee
Confidence 47899999985 442 344445544431 13456798888999999999999842110 012267884
Q ss_pred --EeCChHHHHHHH---HHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 114 --LTAGSTAANETL---MFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 114 --it~G~~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.|.|+++++..+ +.+++++||.|++++|+|..+...++.. |++++.++++.+++|.+|++.+++.+++. ..
T Consensus 107 ~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~ 182 (409)
T 4eu1_A 107 SCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKA-GMELTPYSYYDPATKGLNLAGMLECLDKA---PE 182 (409)
T ss_dssp EEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHT-TCEEEEECCEETTTTEECHHHHHHHHHHS---CT
T ss_pred eeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHc-CCeEEEEEeecCcCCcCcHHHHHHHHHhC---CC
Confidence 589999998875 3456789999999999999999988877 99999999854567899999999998641 12
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
+.+++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++......++..+.. ..++++++
T Consensus 183 ~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~---------~~~~~i~~ 253 (409)
T 4eu1_A 183 GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD---------MVPNLIVA 253 (409)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT---------TSSCCEEE
T ss_pred CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh---------hCCcEEEE
Confidence 456677799999999999999999999999999999999999998766541001123333322 33688999
Q ss_pred cCCCcCCCCCccEEEEE--EecCHH----HHHHHHHh--cccCCCChHHHHHHHHHcCCchhh---HHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMI--YSNNER----VVSAATKM--SSFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRKRLRKR 337 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l--~~~~~~----~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~~~ 337 (464)
+||||+||++|+|+||+ ++.++. +.+.+... .....++.+.|.++..++++..+. .+++++.++.++++
T Consensus 254 ~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (409)
T 4eu1_A 254 QSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEV 333 (409)
T ss_dssp EECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999997 655655 44444433 233456789999999999986432 34577888999999
Q ss_pred HHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecC
Q 037587 338 KEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANI 413 (464)
Q Consensus 338 ~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~ 413 (464)
++.+.+.|++.| +.+.++++|+|+|++++. +++..+++++||.+.|| .||+++..
T Consensus 334 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ll~~~gv~v~p~----------~Ri~~~~~ 392 (409)
T 4eu1_A 334 RKRLVSELKACGSVHDWSHIERQVGMMAYTGLTR-----------EQVELLRSEYHIYMTLN----------GRAAVSGL 392 (409)
T ss_dssp HHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEGGGC
T ss_pred HHHHHHHHHhcCCCCCcceecCCceEEEEeCCCH-----------HHHHHHHHcCCEEEcCC----------CEEEEEec
Confidence 999999999987 777788999999977652 35677888889999975 38999877
Q ss_pred CHHHHHHHHHHHHHHH
Q 037587 414 TEETLQVALQRIKVFA 429 (464)
Q Consensus 414 ~~e~l~~~l~~l~~~l 429 (464)
+++++++++++|++++
T Consensus 393 ~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 393 NSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CTTTHHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHHh
Confidence 8888999999998875
No 74
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.6e-41 Score=340.56 Aligned_cols=351 Identities=17% Similarity=0.211 Sum_probs=268.3
Q ss_pred CceEEeecccc-cc-----cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC---
Q 037587 36 SGIIQMGLAEN-QL-----SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK--- 106 (464)
Q Consensus 36 ~~~i~l~~~~n-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~--- 106 (464)
+..|+|+++.. .. ..+.+.+++...... .......|.+..|.+++|+++++++. + ..
T Consensus 49 ~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~---------~~~~~~~Y~~~~G~~~lr~~ia~~l~---g--~~~~~ 114 (448)
T 3meb_A 49 PKKVNLGVGAYRDESGKPWILPAVKEAEAIISSD---------LSKYNKEYPPVAGFPLFLEAAQFLMF---G--KDSKA 114 (448)
T ss_dssp TTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHC---------TTTTCCSCCCTTCCHHHHHHHHHHHH---C--TTCHH
T ss_pred CCeEEeecccccCCCCCEechHHHHHHHHHHhhc---------ccCCCCCCCCCcchHHHHHHHHHHhc---C--CCccc
Confidence 34699999865 22 224455553332100 01234579888899999999999983 2 11
Q ss_pred CCCCcEEE--eCChHHHHHH--HHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcEEEEEecCCCC-CcccCHHHHH
Q 037587 107 FDPNKLVL--TAGSTAANET--LMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVEIVPIHCSSSN-GFRITISALE 177 (464)
Q Consensus 107 ~~~~~i~i--t~G~~~al~~--~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~~~~v~~~~~~-~~~~d~~~l~ 177 (464)
+++++|++ |+|+++++.+ .+.+++.+||+|++++|+|..+...++ .. |++++.+++...+ +|.+|++.++
T Consensus 115 ~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~-G~~v~~~~~~~~~~~~~~d~e~l~ 193 (448)
T 3meb_A 115 AQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKL-KVPYKEYTYLRKDGELEIDFSNTK 193 (448)
T ss_dssp HHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTT-TSCCEEECCBCTTSCSSBCHHHHH
T ss_pred cCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhC-CCeEEEEeccccccCCCcCHHHHH
Confidence 22689999 9999999988 556678899999999999999988888 76 9999999984333 6889999999
Q ss_pred HHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCC
Q 037587 178 NAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDE 257 (464)
Q Consensus 178 ~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~ 257 (464)
+.+++. ..+.+++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++......++..+..
T Consensus 194 ~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~------ 264 (448)
T 3meb_A 194 KDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVD------ 264 (448)
T ss_dssp HHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHH------
T ss_pred HHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhh------
Confidence 998751 12567888899999999999999999999999999999999999998766541001123333333
Q ss_pred CCCCCCcEEEEcCCCcCCCCCccEEEEE--Ee--------cCH----HHHHHHHHh--cccCCCChHHHHHHHHHcCCch
Q 037587 258 SDDLWSRIHIVYSLSKDFSMPGFRVGMI--YS--------NNE----RVVSAATKM--SSFGLVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 258 ~~~~~~~vi~l~S~SK~~g~~GlRiG~l--~~--------~~~----~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~ 321 (464)
..++++++.||||.||++|+|+||+ ++ +++ .+...+... ..+.+++.+.|.++..++.+.+
T Consensus 265 ---~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~ 341 (448)
T 3meb_A 265 ---AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKR 341 (448)
T ss_dssp ---TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred ---cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChH
Confidence 2368899999999999999999998 66 444 344434332 2334567899999999999875
Q ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHHhC---C------CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcC
Q 037587 322 FT---CNYMKENRKRLRKRKEMLVSGLKVA---G------IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVG 389 (464)
Q Consensus 322 ~~---~~~~~~~~~~~~~~~~~l~~~l~~~---g------~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~g 389 (464)
+. .+++++.++.++++++.+.+.|+++ + +.+..+++|+|+|+.++. +++..+++++|
T Consensus 342 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~ll~~~g 410 (448)
T 3meb_A 342 LLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTP-----------EHVDYLKEKWS 410 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCH-----------HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCH-----------HHHHHHHHhCC
Confidence 42 2447888899999999999999987 3 556678899999988752 46777888899
Q ss_pred eEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 390 LNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 390 I~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|.+.||+ .|||++..+++++++++++|++++++..
T Consensus 411 V~v~~G~---------gRis~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 411 IYLVKAG---------GRMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp EEECSGG---------GEEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred EEEeCCC---------cEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 9999875 2999987678889999999999998554
No 75
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.9e-40 Score=327.48 Aligned_cols=346 Identities=18% Similarity=0.271 Sum_probs=265.6
Q ss_pred hhhhhhcCCCCCCC---CCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHH
Q 037587 20 GWEAYENNPYDQLH---NPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVK 95 (464)
Q Consensus 20 ~~~~~~~~~y~~~~---~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (464)
......-.+|.+.. ...++|+|+.|+|+++ ++.+.+++.+.... . ......|++. +..++|+++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----~----~~~~~~y~~~-~~~~lr~~la~ 76 (360)
T 3hdo_A 7 RQNIASMKGYIPGYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGP-----D----GAALRIYPSA-SSQKLREVAGE 76 (360)
T ss_dssp CHHHHHCCCCCCCCCCSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTT-----T----CGGGGSCCCS-SCHHHHHHHHH
T ss_pred HHHHHhcCCcCCCCCCccccceeeccCCCCCCCCCHHHHHHHHHHHhc-----c----cchhhcCCCC-chHHHHHHHHH
Confidence 33444455665543 3457899999999986 46677776664211 0 0125678765 56999999999
Q ss_pred HHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHH
Q 037587 96 LMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISA 175 (464)
Q Consensus 96 ~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 175 (464)
+++ +++++|++|+|+++++..++.+++++||+|+++.|+|.++...+... |++++.++++. ++.+ ++
T Consensus 77 ~~g--------~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~-g~~~~~v~~~~--~~~~--~~ 143 (360)
T 3hdo_A 77 LYG--------FDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQ-GARVRTFGLTG--DFRI--AG 143 (360)
T ss_dssp HHT--------CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHH-TCEEEEECBCT--TSSB--TT
T ss_pred HhC--------cCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHC-CCEEEEeeCCC--CCCH--HH
Confidence 995 67899999999999999999999999999999999999998888877 99999999864 3444 44
Q ss_pred HHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCc
Q 037587 176 LENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
+++. .+++++++++|+||||.+++.+++.++ |+++|+++|+||+|.++ .+. .... +..
T Consensus 144 l~~~--------~~~~~v~i~~p~nptG~~~~~~~l~~l---~~~~~~~li~De~~~~~--~~~--~~~~---~~~---- 201 (360)
T 3hdo_A 144 FPER--------YEGKVFFLTTPNAPLGPSFPLEYIDEL---ARRCAGMLVLDETYAEF--AES--NALE---LVR---- 201 (360)
T ss_dssp CCSS--------BCSSEEEEESSCTTTCCCCCHHHHHHH---HHHBSSEEEEECTTGGG--SSC--CCTH---HHH----
T ss_pred HHhh--------cCCCEEEEeCCCCCCCCCcCHHHHHHH---HHHCCCEEEEECChHhh--CCc--chhH---Hhc----
Confidence 3322 245789999999999999998876665 45789999999999974 332 2222 222
Q ss_pred CCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHH
Q 037587 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLR 335 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (464)
..+++++++||||.+|++|+|+||+++ ++.+.+.+......++.+++.|.++..++++.+ ++++.++.++
T Consensus 202 -----~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~ 271 (360)
T 3hdo_A 202 -----RHENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHYNLDRLAQAACVAALRDQA----YLSECCRRIR 271 (360)
T ss_dssp -----HCSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSCCSCHHHHHHHHHHHHCHH----HHHHHHHHHH
T ss_pred -----cCCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHH
Confidence 237899999999999999999999999 566666676666667789999999999998744 4778888899
Q ss_pred HHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCH
Q 037587 336 KRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITE 415 (464)
Q Consensus 336 ~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~ 415 (464)
++++.+.+.|+++|+.+.++.++ |+|+.++.. +..++...| .++||.++|+..+ ..++++||+++ ++
T Consensus 272 ~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~~~--~~~~~iRis~~--~~ 338 (360)
T 3hdo_A 272 ETREWFTTELRSIGYDVIPSQGN-YLFATPPDR-------DGKRVYDGL-YARKVLVRHFSDP--LLAHGMRISIG--TR 338 (360)
T ss_dssp HHHHHHHHHHHHTTCEECCCSSS-EEEEECTTC-------CHHHHHHHH-HHTTEECBCCCST--TTTTSEEEECC--CH
T ss_pred HHHHHHHHHHHHCCCEEcCCCcc-EEEEECCCC-------CHHHHHHHH-HHCCEEEEECCCC--CCCCEEEEEcC--CH
Confidence 99999999999989988776664 888887631 122466655 5789999998762 34689999998 79
Q ss_pred HHHHHHHHHHHHHHHhhC
Q 037587 416 ETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 416 e~l~~~l~~l~~~l~~~~ 433 (464)
+++++++++|+++.++..
T Consensus 339 ~e~~~l~~al~~~~~~~~ 356 (360)
T 3hdo_A 339 EEMEQTLAALKEIGEGHH 356 (360)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHhcccc
Confidence 999999999999876543
No 76
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=3e-41 Score=334.97 Aligned_cols=314 Identities=23% Similarity=0.339 Sum_probs=264.0
Q ss_pred cccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCc
Q 037587 77 LALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
...|++..|..+||+++++++. .+++++|++|+|+++++..++.+++++||+|+++.|+|..+...+... |+
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~-------~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 127 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYT-------GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSL-GA 127 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSS-------SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHHHHT-TC
T ss_pred CcCCCCCCChHHHHHHHHHHhc-------cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHc-CC
Confidence 4578888899999999999873 267899999999999999999999999999999999999988888777 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+++.++++++++|.+|++++++++++ ++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~ 201 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRP------TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSE 201 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCT------TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSS
T ss_pred EEEEEeccccCCCCCCHHHHHHhhcc------CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 99999988667888999999998754 789999999999999999999999999999999999999999998655
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc--CCCChHHHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--GLVSSQTQYLLS 314 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~ 314 (464)
.+ ..+.... .+++++++||||.+|++|+|+||+++ ++.+.+.+...... .+.+++.|.++.
T Consensus 202 ~~----~~~~~~~------------~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 264 (375)
T 3op7_A 202 LD----VPSIIEV------------YDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQ 264 (375)
T ss_dssp SC----CCCHHHH------------CTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHH
T ss_pred cC----CCchhhh------------cCCEEEEeEChhhcCCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHH
Confidence 42 2333222 26789999999999999999999999 66666666555443 345778888888
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
.++... .+++++.++.++++++.+.+.|++. ++.+..+.+|+++|+.++.... ..+++..+++++||.+.
T Consensus 265 ~~l~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ll~~~gi~v~ 335 (375)
T 3op7_A 265 LALAHY---QEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMP------MEDFCLQLLQEHGVLLV 335 (375)
T ss_dssp HHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSC------HHHHHHHHHHHHCEECE
T ss_pred HHHhcc---HHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCC------HHHHHHHHHHhCCEEEe
Confidence 888752 5567888888999999999999986 7888888888889988874321 23577888778899999
Q ss_pred CCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 394 PGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
||..|+. ++++||+++. +++++++++++|++++++..
T Consensus 336 ~g~~~~~--~~~iRi~~~~-~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 336 PGNRFER--DGYVRLGFAC-EQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp EGGGGTC--TTEEEECCCS-CHHHHHHHHHHHHHHHGGGC
T ss_pred ChhhhCC--CCeEEEEecC-CHHHHHHHHHHHHHHHHHHh
Confidence 9998874 7899999985 67999999999999997654
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=9e-40 Score=323.82 Aligned_cols=334 Identities=18% Similarity=0.253 Sum_probs=265.3
Q ss_pred eEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 38 IIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 38 ~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
.|||+.|+|+++ ++.+.+++.+..... ......|++..+ .++|+++++++++.+| +++++++|++|+
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~y~~~~~-~~l~~~la~~l~~~~g--~~~~~~~v~~~~ 99 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKI---------ATELNRYPERDA-VELRDELAAYITKQTG--VAVTRDNLWAAN 99 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHH---------GGGTTSCCCTTC-HHHHHHHHHHHHHHHC--CCCCGGGEEEES
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhc---------ccccccCCCccH-HHHHHHHHHhhhhccc--CCCChHhEEECC
Confidence 399999999875 466776666542210 012467877666 8999999999988776 346788999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~ 196 (464)
|+++++..++.+++++||.|+++.|+|+++...+... |.+++.++.+ ++|.+|++++++.+++. ++++|+++
T Consensus 100 G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~i~~~-----~~~~v~~~ 171 (369)
T 3cq5_A 100 GSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGT-HTEFIAVSRG--ADFRIDMDVALEEIRAK-----QPDIVFVT 171 (369)
T ss_dssp HHHHHHHHHHHHHCSTTCEEEEEESSCTHHHHHHHHT-TCEEEEEECC--TTSSCCHHHHHHHHHHH-----CCSEEEEE
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHc-CCEEEEecCC--cCCCCCHHHHHHHhhcc-----CCCEEEEe
Confidence 9999999999999999999999999999998888777 9999999965 45789999999988752 67889999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCC-cEEEEcCCCcCC
Q 037587 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWS-RIHIVYSLSKDF 275 (464)
Q Consensus 197 ~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~vi~l~S~SK~~ 275 (464)
+|+||||.++|.+++.++++.| ++++|+||+|.++.+. . +...+.+ ..+ +++++.||||.+
T Consensus 172 ~~~nptG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~-~-----~~~~~~~---------~~~~~~i~~~s~sK~~ 233 (369)
T 3cq5_A 172 TPNNPTGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPS-P-----SATTLLE---------KYPTKLVVSRTMSKAF 233 (369)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCS-C-----CGGGGTT---------TCTTTEEEEEESSSTT
T ss_pred CCCCCCCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCC-c-----chHHHHh---------hCCCCEEEEEechHhc
Confidence 9999999999998888888765 4999999999975432 2 2222322 225 889999999999
Q ss_pred CCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC
Q 037587 276 SMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS 355 (464)
Q Consensus 276 g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 355 (464)
|++|+|+||++++++ +.+.+......++++.+.|.++..++++.+ ++++.++.++++++.+.+.|++.|+++.++
T Consensus 234 ~~~G~r~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 308 (369)
T 3cq5_A 234 DFAGGRLGYFVANPA-FIDAVMLVRLPYHLSALSQAAAIVALRHSA----DTLGTVEKLSVERVRVAARLEELGYAVVPS 308 (369)
T ss_dssp SCGGGCCEEEEECTH-HHHHHHTTSCTTCSCHHHHHHHHHHHHTHH----HHHTHHHHHHHHHHHHHHHHHHHTCEEECC
T ss_pred CCcccceEEEEeCHH-HHHHHHHcCCCCCCCHHHHHHHHHHhcCHH----HHHHHHHHHHHHHHHHHHHHHhCCCEECCC
Confidence 999999999999654 555565555556688999999999988743 467788888999999999998889888866
Q ss_pred CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 356 NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 356 ~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
.+ .|+|++++. +..++...+ .++||.++||. .++++||+++ +++++++++++|+++++.
T Consensus 309 ~~-~~~~~~~~~--------~~~~l~~~l-~~~gi~v~~~~-----~~~~iRis~~--~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 309 ES-NFVFFGDFS--------DQHAAWQAF-LDRGVLIRDVG-----IAGHLRTTIG--VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp SS-SEEEEECCS--------SHHHHHHHH-HHTTEECBCCS-----CTTEEEEECC--CHHHHHHHHHHHHHHHTT
T ss_pred CC-eEEEEECCC--------CHHHHHHHH-HHCCEEEEECC-----CCCeEEEEeC--CHHHHHHHHHHHHHHHhc
Confidence 55 588998861 122466666 57899999982 3578999998 689999999999988753
No 78
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=6.3e-41 Score=335.16 Aligned_cols=347 Identities=14% Similarity=0.121 Sum_probs=255.6
Q ss_pred eEEeeccc------ccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 38 IIQMGLAE------NQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 38 ~i~l~~~~------n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
.|||+++. ++..++.|+++.+...+. .....|.|..|.++||+++++++-.. ........
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~-----------~~~~~Y~p~~G~p~lr~aia~~~~g~---~~~~~~~~ 111 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDM-----------NLDYEYLPISGYQPFIDEAVKIIYGN---TVELENLV 111 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHT-----------TCCCCCCCTTCCHHHHHHHHHHHHC------CGGGEE
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcC-----------CCCCCCCCcCChHHHHHHHHHHhcCC---Cccccccc
Confidence 59999982 233347777776554221 23346999999999999999987421 11111223
Q ss_pred EEEeCChHHHHHHHHHH----hcCCCCeEEEcCCCCCChhhhcccCCCcE-EEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 112 LVLTAGSTAANETLMFC----LADPGDAFLLPTPYYPGFDRDLKWRPGVE-IVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 112 i~it~G~~~al~~~~~~----l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~-~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.+.|.|++.++..++.. +..|||+|++++|+|+.|...++.. |.+ +..++....+.+.+|.+.+.+.+.. .
T Consensus 112 ~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~a-G~~~V~~~~~~~~~~~~~d~~~~~~~l~~---~ 187 (420)
T 4h51_A 112 AVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAA-GWKNICTYAYYDPKTVSLNFEGMKKDILA---A 187 (420)
T ss_dssp EEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHT-TCCCEEEEECEEGGGTEECHHHHHHHHHH---S
T ss_pred eeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHc-CCeEEEeeccccccccCCCHHHHHHHHhc---c
Confidence 44588888887766554 4579999999999999999999887 876 4455554456778899999888765 2
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
.++.+++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++............. ...+++
T Consensus 188 ~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~---------~~~~~i 258 (420)
T 4h51_A 188 PDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR---------RGIEVL 258 (420)
T ss_dssp CSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH---------TTCCCE
T ss_pred CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh---------hCceEE
Confidence 44677788889999999999999999999999999999999999999877643101111222222 346899
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHH------HHH--hcccCCCChHHHHHHHHHcCCchhh---HHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSA------ATK--MSSFGLVSSQTQYLLSRMLSDKKFT---CNYMKENRKRLR 335 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~------~~~--~~~~~~~s~~~q~~~~~~l~~~~~~---~~~~~~~~~~~~ 335 (464)
++.||||.|+++|+|+||++++.+..... +.. ...+.+++...|.++..++.++.+. ++.++.++++++
T Consensus 259 ~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~ 338 (420)
T 4h51_A 259 LAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIR 338 (420)
T ss_dssp EEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998754432221 111 2234456778999999999987542 445667889999
Q ss_pred HHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEee
Q 037587 336 KRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFA 411 (464)
Q Consensus 336 ~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~ 411 (464)
++|+.+.+.|++.| |.++.+++|||.|+.++. +.++ +|+++||++.|++ |||++
T Consensus 339 ~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~-----------e~v~-~L~e~~Vy~~~~g----------Ris~A 396 (420)
T 4h51_A 339 TMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSK-----------AQCE-YCQNHNIFITVSG----------RANMA 396 (420)
T ss_dssp HHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCH-----------HHHH-HHHHTTEECCTTC----------EEEGG
T ss_pred HHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCH-----------HHHH-HHHhCCEEEcCCC----------EEEec
Confidence 99999999999986 444567889999987753 2333 4578999998752 99999
Q ss_pred cCCHHHHHHHHHHHHHHHHhhC
Q 037587 412 NITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 412 ~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.++++.++.++++|.+++++.+
T Consensus 397 gl~~~ni~~~a~aI~~vvr~i~ 418 (420)
T 4h51_A 397 GLTHETALMLAQTINDAVRNVN 418 (420)
T ss_dssp GCCHHHHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999987654
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.3e-41 Score=339.71 Aligned_cols=335 Identities=16% Similarity=0.199 Sum_probs=249.0
Q ss_pred CCCCceEEeecccccccHH-HHHHHHHhhhhhHHhhhcccccccccccCCCCCCc-----HHHHHHHHHHHHHHcCCCCC
Q 037587 33 HNPSGIIQMGLAENQLSFD-LLESWLASNQEAVELKRNGESLFRELALFQDYHGF-----PDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~ 106 (464)
.+..++|+|+.+.+.++.+ .+.+++..... .........|++..|. ++||++||++++. +| +.
T Consensus 19 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g--~~ 87 (391)
T 3bwn_A 19 PMSDFVVNLDHGDPTAYEEYWRKMGDRCTVT--------IRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VG--NA 87 (391)
T ss_dssp CTTTSCEECSSCCCGGGHHHHHHTGGGSCEE--------ECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HC--SB
T ss_pred cCCCCeeEcCCCCCCCCCCHHHHHhHHHHhh--------cCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cC--CC
Confidence 3566789999998876643 23332211100 0000134679999998 9999999999984 44 45
Q ss_pred CCC-CcEEEeCChHHHHHHHHHHhcCCCC----eEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 107 FDP-NKLVLTAGSTAANETLMFCLADPGD----AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 107 ~~~-~~i~it~G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
+++ ++|++|+|+++++.+++.+++++|| .|++++|+|+.|...++.. |++++.++++.+ ++.
T Consensus 88 ~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~-g~~~~~~~~d~~-~l~----------- 154 (391)
T 3bwn_A 88 ATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYV-RSGMYKWEGDAW-GFD----------- 154 (391)
T ss_dssp CCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTT-CBTTEEEEEEST-TCC-----------
T ss_pred CCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHc-CCeEEEecCCHH-HcC-----------
Confidence 666 6999999999999999999999999 9999999999999988876 999988887642 222
Q ss_pred HHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 182 QAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
.+++++|+++|||||||.+++ +|++.+..++++||+||+|.+ . . +.++. . .
T Consensus 155 -----~~~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~-~---~~~l~-~-----------~ 205 (391)
T 3bwn_A 155 -----KKGPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---P-H---YTPIT-R-----------R 205 (391)
T ss_dssp -----CCSCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---T-T---TSCCC-C-----------C
T ss_pred -----CCCCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---C-C---CCccc-c-----------C
Confidence 027899999999999999996 344422223399999999973 1 1 11211 1 1
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc--cCCCChHHHHHHHHHcCCch-h------hHHHHHHHHH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQYLLSRMLSDKK-F------TCNYMKENRK 332 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~-~------~~~~~~~~~~ 332 (464)
.+++++++||||+||++|+|+||+++.++.+.+.+..... .++++.+.|.++..++++.. + ..+++++.++
T Consensus 206 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
T 3bwn_A 206 QDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGRE 285 (391)
T ss_dssp BCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHH
T ss_pred CCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHH
Confidence 2689999999999999999999999745556565555443 35688999999999998642 1 1456888999
Q ss_pred HHHHHHHHHHHHHHhC-CCeeecC-------------CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 333 RLRKRKEMLVSGLKVA-GIRCLKS-------------NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 333 ~~~~~~~~l~~~l~~~-g~~~~~~-------------~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
.++++++.+.+.|+++ |+.+..+ .+|+|+|++++.. +.+..+++++||.++||+.|
T Consensus 286 ~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~----------~~~~~~l~~~gV~v~pg~~f 355 (391)
T 3bwn_A 286 MMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEE----------TDLVSELRRHKVMSRAGERC 355 (391)
T ss_dssp HHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSS----------CCHHHHHHHTTEECEEGGGG
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcH----------HHHHHHHHHCCEEEccCCCC
Confidence 9999999999999987 5665432 4556999999741 13455667889999999999
Q ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 399 HCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 399 ~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
+. .++++|||++. +++++++++++|++++++.
T Consensus 356 g~-~~~~iRis~~~-~~e~i~~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 356 GS-DKKHVRVSMLS-REDVFNVFLERLANMKLIK 387 (391)
T ss_dssp TC-CTTEEEEESCS-CHHHHHHHHHHHHSCC---
T ss_pred CC-CCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 75 56899999996 8899999999999887543
No 80
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=4.8e-41 Score=335.74 Aligned_cols=342 Identities=15% Similarity=0.174 Sum_probs=263.2
Q ss_pred CceEEeecccc--c----ccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAEN--Q----LSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.++|||+.+.. + .+++.+.+++.+.... .....|++..|..++|+++|+++... .+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~lr~~la~~~~~~-----~~~~ 89 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET-----------ETTKTYAGLSGEPEFQKAMGELILGD-----GLKS 89 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH-----------CCCCCCCCSSCCHHHHHHHHHHHHGG-----GCCG
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCC-----------cccCCCCCCCCcHHHHHHHHHHHhCC-----CCCc
Confidence 46799999872 1 3457777777664211 13557988888999999999998421 2367
Q ss_pred CcEEE--eCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVL--TAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~i--t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++|++ |+|+++++..++.++.. +||+|+++.|+|+++...+... |.+++.+++++++++.+|++.+++.+++.
T Consensus 90 ~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 166 (394)
T 2ay1_A 90 ETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFM-GLPVQTYRYFDAETRGVDFEGMKADLAAA-- 166 (394)
T ss_dssp GGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHH-TCCEEEEECEETTTTEECHHHHHHHHHTC--
T ss_pred ccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHc-CCceEEEecccccCCccCHHHHHHHHHhC--
Confidence 89999 99999999999988754 9999999999999998888877 99999999864456889999999988641
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
.++++++++++||||||.++|.+++++|+++|+++|+++|+||+|.++.+++.. ...++..+.. ..+++
T Consensus 167 -~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~---------~~~~~ 235 (394)
T 2ay1_A 167 -KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEE-DAAGTRLIAS---------RIPEV 235 (394)
T ss_dssp -CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHH-HHHHHHHHHH---------HCSSE
T ss_pred -CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCccc-chHHHHHHhh---------cCCCE
Confidence 123567778999999999999999999999999999999999999986554200 1123332322 12578
Q ss_pred EEEcCCCcCCCCCccEEEEEEe--cCHHHH----HHHHH--hcccCCCChHHHHHHHHHcCCchh---hHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYS--NNERVV----SAATK--MSSFGLVSSQTQYLLSRMLSDKKF---TCNYMKENRKRL 334 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~--~~~~~~----~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~---~~~~~~~~~~~~ 334 (464)
++++||||.+|++|+|+||+++ +++.+. ..+.. ...+..++++.|.++..++++... ..+++++.++.+
T Consensus 236 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 315 (394)
T 2ay1_A 236 LIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGM 315 (394)
T ss_dssp EEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 444332 22221 123344588999999999987621 145688889999
Q ss_pred HHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe
Q 037587 335 RKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF 410 (464)
Q Consensus 335 ~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~ 410 (464)
+++++.+.+.|++++ +++.++++|+|+|++++. +.+..+++++||.+.|| +||++
T Consensus 316 ~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~l~~~gi~v~~~----------~Ris~ 374 (394)
T 2ay1_A 316 LRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGATP-----------EQVKRIKEEFGIYMVGD----------SRINI 374 (394)
T ss_dssp HHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCCH-----------HHHHHHHHHHCEECCTT----------CEEEG
T ss_pred HHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCCH-----------HHHHHHHHhCCEEecCC----------CeEEe
Confidence 999999999998875 777778888999998752 23466677889999874 59999
Q ss_pred ecCCHHHHHHHHHHHHHH
Q 037587 411 ANITEETLQVALQRIKVF 428 (464)
Q Consensus 411 ~~~~~e~l~~~l~~l~~~ 428 (464)
+..+++++++++++|+++
T Consensus 375 ~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 375 AGLNDNTIPILARAIIEV 392 (394)
T ss_dssp GGCCTTTHHHHHHHHHHH
T ss_pred ecCCHhhHHHHHHHHHHc
Confidence 866899999999999875
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.3e-39 Score=316.65 Aligned_cols=323 Identities=19% Similarity=0.294 Sum_probs=251.8
Q ss_pred CCCCCCCCCceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 28 PYDQLHNPSGIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
+|.+...+.++|+|+.|+|+++ ++.+.+++.+.... .....|++. +..++|+++|+++++. .
T Consensus 11 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~-~~~~lr~~la~~~~~~-----~ 73 (335)
T 1uu1_A 11 AYPYETEKRDKTYLALNENPFPFPEDLVDEVFRRLNS-----------DALRIYYDS-PDEELIEKILSYLDTD-----F 73 (335)
T ss_dssp SCCCCCCCCCSEEESSCCCSSCCCHHHHHHHHHTCCG-----------GGGGSCCCS-SCHHHHHHHHHHHTCS-----S
T ss_pred CCCCCCCCCcceECCCCCCCCCCCHHHHHHHHHHhhh-----------hhhhcCCCC-chHHHHHHHHHHcCCC-----C
Confidence 3444333457899999999774 56677766654210 234568764 6899999999999642 2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+++++|++|+|+++++..++.++ ||+|+++ |+|+++...++.. |++++.++++ ++|.+|++++ +
T Consensus 74 ~~~~~v~~~~G~~~al~~~~~~~---gd~Vl~~-p~y~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l-----~---- 137 (335)
T 1uu1_A 74 LSKNNVSVGNGADEIIYVMMLMF---DRSVFFP-PTYSCYRIFAKAV-GAKFLEVPLT--KDLRIPEVNV-----G---- 137 (335)
T ss_dssp CCGGGEEEESSHHHHHHHHHHHS---SEEEECS-SSCHHHHHHHHHH-TCEEEECCCC--TTSCCCCCCC-----C----
T ss_pred CCHHHEEEcCChHHHHHHHHHHh---CCcEEEC-CCcHHHHHHHHHc-CCeEEEeccC--CCCCCCHHHc-----C----
Confidence 56889999999999999999988 8999999 9999998888776 9999999876 3467787776 1
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++++|++++||||||.++|.+++++++++| | ++|+||+|.++.+ . .+.+ +.. ..++++
T Consensus 138 --~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~--~--~~~~---~~~---------~~~~~i 195 (335)
T 1uu1_A 138 --EGDVVFIPNPNNPTGHVFEREEIERILKTG---A-FVALDEAYYEFHG--E--SYVD---FLK---------KYENLA 195 (335)
T ss_dssp --TTEEEEEESSCTTTCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHC--C--CCGG---GGG---------TCSSEE
T ss_pred --CCCEEEEeCCCCCCCCCCCHHHHHHHHHhC---C-EEEEECcchhhcc--h--hHHH---Hhh---------hCCCEE
Confidence 678999999999999999999999999987 7 8999999997432 2 1122 222 236899
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
+++||||.+|++|+|+||+++ ++.+.+.+......++++++.|.++.+++++.+ ++++.++.++++++++.+.|+
T Consensus 196 ~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~ 270 (335)
T 1uu1_A 196 VIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPFNVSYVSQMFAKVALDHRE----IFEERTKFIVEERERMKSALR 270 (335)
T ss_dssp EEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHSCTTCSCHHHHHHHHHHHHTHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhcCCcccCeEEEEe-CHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHH----HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 555666666655556788999999999998743 467778888889999999998
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIK 426 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~ 426 (464)
++|+.+.++. ++|+|++++. .+..+++..++ ++||.++|+ ++++||+++ +++++++++++|+
T Consensus 271 ~~g~~~~~~~-~~~~~~~~~~-------~~~~~~~~~l~-~~gi~v~~~-------~~~iRis~~--~~~~i~~~~~~l~ 332 (335)
T 1uu1_A 271 EMGYRITDSR-GNFVFVFMEK-------EEKERLLEHLR-TKNVAVRSF-------REGVRITIG--KREENDMILRELE 332 (335)
T ss_dssp HHTCCBCCCC-SSEEEEECCT-------HHHHHHHHHHH-HHTEEEEEE-------TTEEEEECC--CHHHHHHHHHHHH
T ss_pred HCCcEEcCCC-CeEEEEECCC-------CCHHHHHHHHH-HCCEEEEEC-------CCeEEEEeC--CHHHHHHHHHHHH
Confidence 8888776555 5689999874 12335667765 579999982 568999997 4788999999987
Q ss_pred HH
Q 037587 427 VF 428 (464)
Q Consensus 427 ~~ 428 (464)
++
T Consensus 333 ~~ 334 (335)
T 1uu1_A 333 VF 334 (335)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.1e-35 Score=297.29 Aligned_cols=344 Identities=14% Similarity=0.073 Sum_probs=257.9
Q ss_pred CCCceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc
Q 037587 34 NPSGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 34 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~ 111 (464)
++.++|||+.+.+ .+ +++.+.+++.+..... ......|++..|..++++++++++.+.++ .++
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~---------~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~~ 105 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKY---------GTGCAGSRFLNGTLDIHVELEEKLSAYVG------KEA 105 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHH---------CSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CSE
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHc---------CCCCCCcCcccCCcHHHHHHHHHHHHHhC------CCc
Confidence 3457899999987 44 4566666666542210 01223466667888999999999988765 358
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
+++|+|+++++..++.+++++||.|+++.|+|+.+...+... |++++.++. +|++.+++.+++.. ..+++
T Consensus 106 v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~-g~~~~~v~~-------~d~~~l~~~l~~~~--~~~~~ 175 (398)
T 3a2b_A 106 AILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLS-FSKVIKYGH-------NNMEDLRAKLSRLP--EDSAK 175 (398)
T ss_dssp EEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHS-SSEEEEECT-------TCHHHHHHHHHTSC--SSSCE
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHc-CCceEEeCC-------CCHHHHHHHHHhhc--cCCce
Confidence 999999999999999999999999999999999998888877 999999885 47899998886411 01688
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc-EEEEcC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR-IHIVYS 270 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-vi~l~S 270 (464)
+|++++|+||||.+++ +++|+++|+++|+++|+||+|+.+.++.. ..++.+... ..++ +++++|
T Consensus 176 ~v~~~~~~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~---------~~~~~di~~~s 240 (398)
T 3a2b_A 176 LICTDGIFSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHK---GAGTASHFG---------LNDDVDLIMGT 240 (398)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG---GCCHHHHHT---------CGGGCSEEEEE
T ss_pred EEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCCC---CCchHhhcC---------CCcCCeEEEec
Confidence 9999999999999987 77888899999999999999987655422 123322211 1134 689999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHh-c--ccCCCChHHHH-HHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKM-S--SFGLVSSQTQY-LLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~--~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|||.+|++| ||++++ +.+.+.+... . .....+++.|. ++..+++.. +++++.++.++++++++.+.|+
T Consensus 241 ~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~----~~~~~~~~~~~~~~~~l~~~L~ 312 (398)
T 3a2b_A 241 FSKSLASLG---GFVAGD-ADVIDFLKHNARSVMFSASMTPASVASTLKALEII----QNEPEHIEKLWKNTDYAKAQLL 312 (398)
T ss_dssp SSSTTCSSC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH----HHCTHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCC---cEEEeC-HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHHHHHHHH
Confidence 999999778 999995 4555545442 2 22234556665 445666542 2356778888999999999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFAN-ITEETLQVALQR 424 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~-~~~e~l~~~l~~ 424 (464)
+.|+++.++.+ +|+|+.++.. ....+++..|++ +||.+.||..|... ..+++||+++. .+++++++++++
T Consensus 313 ~~g~~~~~~~g-~~~~~~~~~~------~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~ 384 (398)
T 3a2b_A 313 DHGFDLGATES-PILPIFIRSN------EKTFWVTKMLQD-DGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEK 384 (398)
T ss_dssp HTTCCBCSCCS-SEEEEECCCH------HHHHHHHHHHHH-TTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHH
T ss_pred hcCCCcCCCCC-CEEEEEcCCH------HHHHHHHHHHHH-CCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHH
Confidence 98988877765 6999998742 123357777765 59999999887532 35789999986 689999999999
Q ss_pred HHHHHHhhC
Q 037587 425 IKVFAQSCN 433 (464)
Q Consensus 425 l~~~l~~~~ 433 (464)
|++++++..
T Consensus 385 l~~~l~~~~ 393 (398)
T 3a2b_A 385 MVKVFKQAE 393 (398)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHhC
Confidence 999987654
No 83
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.9e-34 Score=285.87 Aligned_cols=345 Identities=12% Similarity=0.078 Sum_probs=245.4
Q ss_pred CCceEEeeccccccc---HHHHHHHHHhhhhhHHhhhcccccccccccC--CCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 35 PSGIIQMGLAENQLS---FDLLESWLASNQEAVELKRNGESLFRELALF--QDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
...+|||+.+ |+++ ++.+.+++.+.... . +. .....+| +...+..++++.++++++ . +
T Consensus 42 g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~--~---~~--~~~~~~~~~g~~~~~~~l~~~la~~~~--------~-~ 104 (399)
T 3tqx_A 42 EKEVLNFCAN-NYLGLADHPALIKTAQTVVEQ--Y---GF--GMASVRFICGTQTIHKELEKDISEFLG--------T-D 104 (399)
T ss_dssp TEEEEECSSC-CTTSCTTCHHHHHHHHHHHHH--H---CS--CCCSCCCCCCCBHHHHHHHHHHHHHHT--------C-S
T ss_pred CeeEEEeecc-CcccccCCHHHHHHHHHHHHH--h---CC--CCCCcCccccCchHHHHHHHHHHHHHC--------C-C
Confidence 4568999998 5543 46666666554221 0 00 0001122 222335788888888875 2 3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++|++++| ++++..++.+++++||.|+++.|+|+.+...++.. |.+++.++. .|++.+++.+++....+.+
T Consensus 105 ~~i~~~sG-t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~ 175 (399)
T 3tqx_A 105 DTILYSSC-FDANGGLFETLLGPEDAIISDELNHASIIDGIRLC-KAQRYRYKN-------NAMGDLEAKLKEADEKGAR 175 (399)
T ss_dssp EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSC-CSEEEEECT-------TCTTHHHHHHHHHHTTTCS
T ss_pred cEEEECch-HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCceeEeCC-------CCHHHHHHHHHhhhccCCC
Confidence 56666665 67999999999999999999999999998888876 999999885 3678899988765443447
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++|++++|+||||.+++ +++|+++|+++|+++|+||+|+...++.. ..+...... . ..+.+++++
T Consensus 176 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~-~-------~~~~di~~~ 241 (399)
T 3tqx_A 176 FKLIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGEN---GRGTPEYCG-V-------ADRVDILTG 241 (399)
T ss_dssp SEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT---SCCHHHHHT-C-------TTCCSEEEE
T ss_pred ceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCchHHhhC-C-------CCCCcEEEe
Confidence 899999999999999998 78899999999999999999963323322 122222321 0 124568899
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHh-ccc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
||||++| |++.||+++++ .+.+.+... ..+ .+.+++.+.++...++.. .++.++.++.++++++++.+.|
T Consensus 242 s~sK~~~--g~~gG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~~L 315 (399)
T 3tqx_A 242 TLGKALG--GASGGYTSGHK-EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL---KTEGPQLRKQLQENSRYFRAGM 315 (399)
T ss_dssp ESSSSSC--SSCCEEEEECH-HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcc--cCceEEEEcCH-HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH---hhccHHHHHHHHHHHHHHHHHH
Confidence 9999997 34449999954 454544443 222 245666666666666532 2446788889999999999999
Q ss_pred HhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHH
Q 037587 346 KVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQ 423 (464)
Q Consensus 346 ~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~ 423 (464)
++.|+++.++.++ |+|+.++.. ....+++..++ ++||.+.|+..+. ..+.+++||+++. .++++++++++
T Consensus 316 ~~~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~ 387 (399)
T 3tqx_A 316 EKLGFQLVPGNHP-IIPVMLGDA------QLATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIE 387 (399)
T ss_dssp HHHTCCBCCCSSS-EEEEEEECH------HHHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHH
T ss_pred HHcCCCcCCCCCC-EEEEEeCCH------HHHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHH
Confidence 9999988877765 788888642 22345777776 4799999875443 2345699999974 68999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++..
T Consensus 388 ~l~~~~~~~~ 397 (399)
T 3tqx_A 388 AFGQVGKKLG 397 (399)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 84
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=9.6e-34 Score=283.49 Aligned_cols=342 Identities=13% Similarity=0.089 Sum_probs=245.0
Q ss_pred CCCceEEeeccccccc---HHHHHHHHHhhhhhHHhhhcccccccccccCC--CCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 34 NPSGIIQMGLAENQLS---FDLLESWLASNQEAVELKRNGESLFRELALFQ--DYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
+...+|||+.+ |+++ ++.+.+++.+.... . +. ......|+ ...+..++|++|+++++ ++
T Consensus 43 ~g~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~--~---~~--~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~ 106 (401)
T 1fc4_A 43 DGSHVINFCAN-NYLGLANHPDLIAAAKAGMDS--H---GF--GMASVRFICGTQDSHKELEQKLAAFLG--------ME 106 (401)
T ss_dssp TSCEEEECCCS-CTTSCTTCHHHHHHHHHHHHH--H---CS--CCCSCHHHHCCBHHHHHHHHHHHHHHT--------CS
T ss_pred CCccEEEeecc-CcccccCCHHHHHHHHHHHHH--h---CC--CCCCCCcccCCcHHHHHHHHHHHHHhC--------CC
Confidence 45678999998 5563 56666666654211 0 00 00011232 13456899999999985 44
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
++|++++| ++++..++.+++++||.|+++.|+|+.+...+... |++++.++. .|++.+++.+++....+.
T Consensus 107 -~~i~~~sG-s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~~~~~~ 176 (401)
T 1fc4_A 107 -DAILYSSC-FDANGGLFETLLGAEDAIISDALNHASIIDGVRLC-KAKRYRYAN-------NDMQELEARLKEAREAGA 176 (401)
T ss_dssp -EEEEESCH-HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTS-CSEEEEECT-------TCHHHHHHHHHHHHHTTC
T ss_pred -cEEEeCCh-HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHc-CCceEEECC-------CCHHHHHHHHHHhhccCC
Confidence 66666666 66888899999999999999999998787777766 999998873 478999998875432222
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc-cccc-CCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS-GTVF-DSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~-~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ .+. .+.+...+ ..+.++
T Consensus 177 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~--~~~~~~~~-----------~~~~di 240 (401)
T 1fc4_A 177 RHVLIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGR--GSHEYCDV-----------MGRVDI 240 (401)
T ss_dssp SSEEEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSC--CHHHHTTC-----------TTCCSE
T ss_pred CceEEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCC--ccHHHcCC-----------CcCCcE
Confidence 6789999999999999998 7888899999999999999996 6432 222 22221222 124578
Q ss_pred EEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHhc-cc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHH
Q 037587 267 IVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKMS-SF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEML 341 (464)
Q Consensus 267 ~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 341 (464)
+++||||.+ |.+| ||++++ +.+.+.+.... .+ .+.+.+.+.++..+++.... .++.++.++++++++
T Consensus 241 ~~~s~sK~~~~~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l 312 (401)
T 1fc4_A 241 ITGTLGKALGGASG---GYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA----GSELRDRLWANARQF 312 (401)
T ss_dssp EEEESSSTTCSSSC---EEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT----CHHHHHHHHHHHHHH
T ss_pred EEecchhhccCCCC---EEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHH
Confidence 899999999 6555 999995 55555554432 12 25678888888877754221 356677788889999
Q ss_pred HHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHH
Q 037587 342 VSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFAN-ITEETLQ 419 (464)
Q Consensus 342 ~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~-~~~e~l~ 419 (464)
.+.|+++|+++.++ .+.|+|++++.. ....+++..|+ ++||.++||..|+.. ..+++||+++. .++++++
T Consensus 313 ~~~L~~~g~~~~~~-~~~~~~~~~~~~------~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~ 384 (401)
T 1fc4_A 313 REQMSAAGFTLAGA-DHAIIPVMLGDA------VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQIT 384 (401)
T ss_dssp HHHHHHTTCCBCCS-SSSEEEEEEECH------HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHH
T ss_pred HHHHHHcCCcccCC-CCCEEEEEcCCh------HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999888888754 456889988642 22335666665 569999999877542 24689999985 6899999
Q ss_pred HHHHHHHHHHHhhC
Q 037587 420 VALQRIKVFAQSCN 433 (464)
Q Consensus 420 ~~l~~l~~~l~~~~ 433 (464)
+++++|++++++.+
T Consensus 385 ~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 385 RAVEAFTRIGKQLG 398 (401)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998764
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.4e-33 Score=279.78 Aligned_cols=298 Identities=13% Similarity=0.147 Sum_probs=231.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEe
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPN-KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~ 162 (464)
..++++++++++.+.+| ++++ +|++|+|+++++..++.+++++||+|++++|+|++ +...+... |++++.++
T Consensus 65 ~~~~~~~~~~~la~~~g----~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 139 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQ----TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLVDMAGRY-GADVRTIS 139 (393)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHHHHHHHc-CCceEEEe
Confidence 46788888888887766 5677 99999999999999999999999999999999998 77777766 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
++. ++.+|++.|++.+++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|. ++.. +
T Consensus 140 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~---~g~~--~ 204 (393)
T 1vjo_A 140 KPW--GEVFSLEELRTALETH-----RPAILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS---LGGV--P 204 (393)
T ss_dssp CCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT---TTTS--C
T ss_pred cCC--CCCCCHHHHHHHHhhC-----CceEEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc---ccCc--C
Confidence 874 5678999999998752 5788999999999999987 6778889999999999999998 3322 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh---------------------cc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM---------------------SS 301 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~---------------------~~ 301 (464)
.++ . ..+.++++.|+||.++.+| |+||++++++ +.+.+... ..
T Consensus 205 -~~~----~---------~~~~di~~~s~sK~l~~~~-~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
T 1vjo_A 205 -IFL----D---------AWGVDLAYSCSQKGLGCSP-GASPFTMSSR-AIEKLQRRRTKVANWYLDMNLLGKYWGSERV 268 (393)
T ss_dssp -CCT----T---------TTTCSEEECCSSSTTCSCS-SCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCC
T ss_pred -Ccc----c---------ccCccEEEEcCcccccCCC-ceEEEEECHH-HHHHHhccCCCCCceecCcHhhhhhhccCCC
Confidence 121 1 1256788999999998777 9999999554 44444221 11
Q ss_pred cC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---cEEEEEecCcccccCChhHH
Q 037587 302 FG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNA---GLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 302 ~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~ 377 (464)
.+ +.+.+.|.++..+++... ..++++.++.++++++++.+.|++.|+++..+.+ +.++++.++.... .
T Consensus 269 ~~g~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~ 340 (393)
T 1vjo_A 269 YHHTAPINLYYALREALRLIA--QEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVD------G 340 (393)
T ss_dssp CCSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCC------H
T ss_pred CCCCCCHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCC------H
Confidence 12 567788888888876421 3346778888999999999999988888877654 3477888763211 2
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHH
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l 429 (464)
.+++..|++++||.++||..|. .++++||++ +. .+++++++++++|++++
T Consensus 341 ~~~~~~l~~~~gi~v~~g~~~~--~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 341 KAVARRLLNEHNIEVGGGLGEL--AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCEEEecCcccc--CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 3577777655599999998764 368999995 33 46778999999999876
No 86
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=4e-33 Score=277.37 Aligned_cols=336 Identities=10% Similarity=0.053 Sum_probs=239.2
Q ss_pred CCceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhcccccccccccC--CCCCCcHHHHHHHHHHHHHHcCCCCCCCCC
Q 037587 35 PSGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFRELALF--QDYHGFPDAKKELVKLMARIRGNKVKFDPN 110 (464)
Q Consensus 35 ~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~ 110 (464)
+..+|||+.++| .+ +++.+.+++.+..... +. ......| ....+..++|++++++++ ++ +
T Consensus 38 g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~-----~~--~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~-~ 101 (384)
T 1bs0_A 38 DRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQF-----GI--GSGGSGHVSGYSVVHQALEEELAEWLG--------YS-R 101 (384)
T ss_dssp TEEEEECSCCCTTSGGGCHHHHHHHHHHHHHH-----CS--CCCSBTTTTCCCHHHHHHHHHHHHHHT--------CS-E
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHh-----CC--CCCCcCcccCChHHHHHHHHHHHHHhC--------CC-c
Confidence 456899999886 32 4466666666542210 00 0011234 333567889999999985 33 5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.|++++| ++++..++.+++++||.|+++.|+|+.+...+... |++++.+|. .|++.+++.+++. .+++
T Consensus 102 ~i~~~sG-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~l~~~l~~~---~~~~ 169 (384)
T 1bs0_A 102 ALLFISG-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLS-PSQLRRFAH-------NDVTHLARLLASP---CPGQ 169 (384)
T ss_dssp EEEESCH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTS-SSEEEEECT-------TCHHHHHHHHHSC---CSSC
T ss_pred EEEeCCc-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHc-CCCEEEeCC-------CCHHHHHHHHHhc---CCCC
Confidence 5666666 89999999999999999999999999888888776 999998874 3788998887641 1136
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcC
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYS 270 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S 270 (464)
++|++++|+||||.+++ +++|+++|+++|+++|+||+|+.+.+... ..++..... . ...++++|
T Consensus 170 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~---~~~~~~~~~---------~-~~di~~~s 233 (384)
T 1bs0_A 170 QMVVTEGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQ---GRGSCWLQK---------V-KPELLVVT 233 (384)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGG---GCCHHHHTT---------C-CCSEEEEE
T ss_pred eEEEEeCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCC---CCchHHhcC---------C-CCcEEEee
Confidence 88899999999999998 67888999999999999999986544311 011111211 1 23388999
Q ss_pred CCcCCCCCccEEEEEEecCHHHHHHHHHhc-cc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 271 LSKDFSMPGFRVGMIYSNNERVVSAATKMS-SF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 271 ~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
|||++|++| ||++++ +.+.+.+.... .+ ...+++.+.++.++++... ..+.++.++.++++++++.+.|+
T Consensus 234 ~sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~ 307 (384)
T 1bs0_A 234 FGKGFGVSG---AAVLCS-STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIR--SDEGDARREKLAALITRFRAGVQ 307 (384)
T ss_dssp SSSTTSSCC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccchhhccC---cEEEeC-HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHH
Confidence 999999777 999995 55555444432 22 1467788877777765322 01456778888999999999999
Q ss_pred hCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CCCCeEEEEeec-CCHHHHHHHHHH
Q 037587 347 VAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NEPGWFRICFAN-ITEETLQVALQR 424 (464)
Q Consensus 347 ~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~~~~~Ris~~~-~~~e~l~~~l~~ 424 (464)
++|+++.++.+ .|+|++++.. ....+++..++ ++||.++||..|+. ...+++||+++. .+++++++++++
T Consensus 308 ~~g~~~~~~~~-~~~~~~~~~~------~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~ 379 (384)
T 1bs0_A 308 DLPFTLADSCS-AIQPLIVGDN------SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEV 379 (384)
T ss_dssp TSSCEECSCCS-SBCCEEEESH------HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHH
T ss_pred hcCCcccCCCC-CEEEEEeCCH------HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHH
Confidence 98988876544 5778887632 22335777776 56999999987753 234789999986 589999999999
Q ss_pred HHHH
Q 037587 425 IKVF 428 (464)
Q Consensus 425 l~~~ 428 (464)
|+++
T Consensus 380 l~~~ 383 (384)
T 1bs0_A 380 LHGN 383 (384)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9864
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=2.8e-33 Score=277.87 Aligned_cols=339 Identities=15% Similarity=0.146 Sum_probs=240.1
Q ss_pred EEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh
Q 037587 39 IQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGS 118 (464)
Q Consensus 39 i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~ 118 (464)
+-|+.+.+..+++.+.+++.+..... . +.........|....+..+++++++++++ +++++|++|+|+
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v~~~~g~ 70 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREK-Y---GNPNSAHGMGIEANLHMEKAREKVAKVLG--------VSPSEIFFTSCA 70 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTC-C---CCTTCSSHHHHHHHHHHHHHHHHHHHHHT--------SCGGGEEEESCH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhc-C---CCCccccHHHHHHHHHHHHHHHHHHHHcC--------CCCCeEEEECCH
Confidence 45666666666666776666542110 0 00000000112233456889999999985 577899999999
Q ss_pred HHHHHHHHHHhc----CCCCeEEEcCCCCCChhhhc---ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 119 TAANETLMFCLA----DPGDAFLLPTPYYPGFDRDL---KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 119 ~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++++..++.++. ++||+|+++.|+|+.+...+ ... |++++.+++++ ++.+|+++|++.+++ +++
T Consensus 71 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~------~~~ 141 (384)
T 1eg5_A 71 TESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMK-GFKVKYVPVDS--RGVVKLEELEKLVDE------DTF 141 (384)
T ss_dssp HHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHT-TCEEEECCBCT--TSCBCHHHHHHHCCT------TEE
T ss_pred HHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhc-CCEEEEEccCC--CCccCHHHHHHHhCC------CCe
Confidence 999999999997 79999999999998776554 555 99999999864 567899999988754 789
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC--eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKR--IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~--~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+|++++|+||||.+++ +++|.++|+++| +++|+||+|+ |+.. . .++. ..+.++++.
T Consensus 142 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~---~~~~--~-~~~~-------------~~~~di~~~ 199 (384)
T 1eg5_A 142 LVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT---IGKI--P-FSLE-------------KLEVDYASF 199 (384)
T ss_dssp EEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT---TTTS--C-CCCT-------------TTCCSEEEE
T ss_pred EEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhh---cCCc--c-cCch-------------hcCCCEEEe
Confidence 9999999999999998 577888888999 9999999997 4332 1 1211 114568899
Q ss_pred CCCcCCCCCccEEEEEEecCHH-HHHHHHH-----hcccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNER-VVSAATK-----MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~-~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
|+||.+|++| +||++++++. +...+.. ....++.+.+.|.++..+++.. .+++++.++.++++++++.+
T Consensus 200 s~sK~~g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~ 274 (384)
T 1eg5_A 200 SAHKFHGPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA---VEELSEAAKHMEKLRSKLVS 274 (384)
T ss_dssp EGGGGTSCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHH
T ss_pred cHHHhcCCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHH
Confidence 9999999888 7999996652 1211111 1123457788888888877652 34577788888999999999
Q ss_pred HHHhCCCeeecCC---ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-----------------CC
Q 037587 344 GLKVAGIRCLKSN---AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-----------------EP 403 (464)
Q Consensus 344 ~l~~~g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-----------------~~ 403 (464)
.|++.|+++..+. .+.++++.++.. +..++...| .++||.+.+|..|+.. ..
T Consensus 275 ~L~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 346 (384)
T 1eg5_A 275 GLMNLGAHIITPLEISLPNTLSVSFPNI-------RGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQ 346 (384)
T ss_dssp HHHTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHH
T ss_pred HhCCCCeEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcC
Confidence 9998888876542 124677777531 123466665 5789999999877532 13
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 404 GWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 404 ~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+++||+++. .+++++++++++|++++++.+
T Consensus 347 ~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 377 (384)
T 1eg5_A 347 GAIRISLCKYNTEEEVDYFLKKIEEILSFLD 377 (384)
T ss_dssp HEEEEECCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 689999985 689999999999999998764
No 88
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.1e-33 Score=275.35 Aligned_cols=301 Identities=16% Similarity=0.160 Sum_probs=233.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFD-PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~-~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
.++++++++++.+.+| ++ ++++++|+|+++++..++.+++++||+|++++|+|++ +...+... |++++.++.
T Consensus 52 ~~~~~~~~~~la~~~g----~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 126 (386)
T 2dr1_A 52 RKVHMDTVERLREFLE----VEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKRYKEVVESN-GRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHT----CSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHHHHHhC----CCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHHHHHHHHHh-CCceEEEec
Confidence 6788888888887766 33 6789999999999999999999999999999999987 77777766 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+. ++.+|+++|++.+++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+...+.
T Consensus 127 ~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~------ 191 (386)
T 2dr1_A 127 EP--GKAVKPEDLDDALRK----NPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGGAD------ 191 (386)
T ss_dssp CT--TCCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBC------
T ss_pred CC--CCCCCHHHHHHHHhc----CCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccCcc------
Confidence 64 567899999999864 237899999999999999976 688889999999999999999853221
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH----------------HH----hcccC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA----------------TK----MSSFG 303 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~----------------~~----~~~~~ 303 (464)
.++. ..+.++++.|+||.++.++ ++||++++++ +.+.+ .. ....+
T Consensus 192 ~~~~-------------~~~~di~~~s~sK~~~~~~-g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (386)
T 2dr1_A 192 IKFD-------------KWGLDVVFSSSQKAFGVPP-GLAIGAFSER-FLEIAEKMPERGWYFDIPLYVKYLKEKESTPS 256 (386)
T ss_dssp CCTT-------------TTTCSEEEEETTSTTCCCS-SCEEEEECHH-HHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSS
T ss_pred cccc-------------ccCCcEEEEeccccccCCC-ceEEEEECHH-HHHHHhcCCCCceEEeHHHHHHhhccCCCCCC
Confidence 1211 1256788999999998652 4899999654 43332 11 12234
Q ss_pred CCChHHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ccEEEEEecCcccccCChhHHH
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVAGIRCLKSN---AGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
+.+.+.|.++..+++.. .+ .+++.++.++++++++.+.|+++|+++..+. .+.++|+.++.... ..
T Consensus 257 ~~~~~~~~a~~~~l~~~---~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~ 327 (386)
T 2dr1_A 257 TPPMPQVFGINVALRII---EKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIK------GD 327 (386)
T ss_dssp CCCHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCC------HH
T ss_pred CCCHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCC------HH
Confidence 56778888887777642 22 2567788888999999999998888887664 35689999874211 23
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+++..|++ +||.++||..+. ..+++||+++. .+++++++++++|++++++...
T Consensus 328 ~~~~~l~~-~gi~v~~~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 328 EVYEAMRK-RGFELAKGYGSV--KEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp HHHHHHHH-TTEECEECCGGG--TTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCeEEecCcccc--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 56777765 599999998653 35799999986 6899999999999999887643
No 89
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=6.2e-33 Score=278.93 Aligned_cols=340 Identities=15% Similarity=0.163 Sum_probs=242.8
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCC--CCCcHHHHHHHHHHHHHHcCCCCCC-CCCcE
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQD--YHGFPDAKKELVKLMARIRGNKVKF-DPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~~~i 112 (464)
.++|+|+.+.+..+++.+.+++.+..... .+ ........|++ ..+..++|++++++++ . ++++|
T Consensus 27 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~----~~-~~~~~~~~y~~~~~~~~~~l~~~la~~~~--------~~~~~~v 93 (420)
T 1t3i_A 27 HPLVYLDNAATSQKPRAVLEKLMHYYEND----NA-NVHRGAHQLSVRATDAYEAVRNKVAKFIN--------ARSPREI 93 (420)
T ss_dssp EECEECBTTTCCCCCHHHHHHHHHHHHHT----CC-CC--CCSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHhc----cC-CCCcccchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeE
Confidence 35799999988765666777666542210 00 00001233543 3467889999999986 4 57899
Q ss_pred EEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCCh----hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 113 VLTAGSTAANETLMFCL----ADPGDAFLLPTPYYPGF----DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
++|+|+++++..++.++ +++||+|+++.|+|++. ...+... |++++.++.+ .++.+|++++++++++
T Consensus 94 ~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--~~~~~d~~~l~~~l~~-- 168 (420)
T 1t3i_A 94 VYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKT-GAVLKFVQLD--EQESFDLEHFKTLLSE-- 168 (420)
T ss_dssp EEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHH-CCEEEEECBC--TTSSBCHHHHHHHCCT--
T ss_pred EEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhc-CcEEEEeccC--CCCCcCHHHHHHhhCC--
Confidence 99999999999999999 89999999999999983 4445555 9999999986 4567899999998754
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCc
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSR 264 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+.. .. . .++..+ +.
T Consensus 169 ----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~---~~--~-~~~~~~-------------~~ 222 (420)
T 1t3i_A 169 ----KTKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAP---HY--P-LDVQLI-------------DC 222 (420)
T ss_dssp ----TEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTT---TS--C-CCHHHH-------------TC
T ss_pred ----CceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccC---Cc--c-Cchhhc-------------CC
Confidence 7899999999999999998 778889999999999999999842 11 1 122222 45
Q ss_pred EEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc---------------------c-CCCChHHHHHHHH-HcCCch
Q 037587 265 IHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS---------------------F-GLVSSQTQYLLSR-MLSDKK 321 (464)
Q Consensus 265 vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~---------------------~-~~~s~~~q~~~~~-~l~~~~ 321 (464)
++++.|+||.+|.+| +||++++ +.+.+.+..... + ...+.+.+.++.. +++...
T Consensus 223 di~~~s~sK~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 223 DWLVASGHKMCAPTG--IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp SEEEEEGGGTTSCTT--CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhhcCCCc--eEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 688999999998778 8999995 445444433221 1 1244555555433 333211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC------ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN------AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP 394 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~------~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p 394 (464)
...+++.++.++++++++.+.|++. |+++..+. ++ ++++.++. . ...++... +.++||.++|
T Consensus 300 --~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~-l~~~gi~v~~ 368 (420)
T 1t3i_A 300 --DLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAA-LASFNVAG-L------HASDVATM-VDQDGIAIRS 368 (420)
T ss_dssp --HHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCS-EEEEEETT-B------CHHHHHHH-HHTTTEECBC
T ss_pred --HhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCC-EEEEEECC-C------CHHHHHHH-HHHCCeEEee
Confidence 1235667788888999999999987 88887664 55 55556753 1 12245544 5678999999
Q ss_pred CCCCCC------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 395 GSSCHC------NEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 395 g~~f~~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
|..|.. ..++++||+++. .++++++.++++|+++++..+
T Consensus 369 ~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 369 GHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp SCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred ccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 965531 126789999986 589999999999999988654
No 90
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1e-32 Score=276.12 Aligned_cols=344 Identities=12% Similarity=0.068 Sum_probs=240.5
Q ss_pred CceEEeecccc-ccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEE
Q 037587 36 SGIIQMGLAEN-QLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLV 113 (464)
Q Consensus 36 ~~~i~l~~~~n-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~ 113 (464)
.++|+++.|.+ .++ +|.+.+++.+..... +.........|+...+..++|+++|++++ . +++|+
T Consensus 46 ~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~-~~~i~ 111 (401)
T 2bwn_A 46 QDITVWCGNDYLGMGQHPVVLAAMHEALEAV-----GAGSGGTRNISGTTAYHRRLEAEIAGLHQ--------K-EAALV 111 (401)
T ss_dssp EEEEECSCSCTTSGGGCHHHHHHHHHHHHHH-----CSCCCSBTTTBCCBHHHHHHHHHHHHHTT--------C-SEEEE
T ss_pred CcEEEeeCCCcccCCCCHHHHHHHHHHHHHc-----CCCCCCcCcccCChHHHHHHHHHHHHHhC--------C-CcEEE
Confidence 45688988766 342 345666665542210 00000011235555577899999999985 2 57888
Q ss_pred EeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 114 LTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 114 it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
+|+|++ ++..++.+++ .+||.|+++.|+|+.+...++.. |++++.++.+ |++.+++.++... .++++
T Consensus 112 ~~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~v~~~-------d~~~le~~l~~~~--~~~~~ 180 (401)
T 2bwn_A 112 FSSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRN-AGPKRIFRHN-------DVAHLRELIAADD--PAAPK 180 (401)
T ss_dssp ESCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHS-CCCEEEECTT-------CHHHHHHHHHHSC--TTSCE
T ss_pred ECCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHc-CCeEEEEcCC-------CHHHHHHHHHhhc--cCCce
Confidence 988877 7777766653 58999999999999888887776 9999999863 6788888886421 13788
Q ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 192 GVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 192 ~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
+|++++|+||||.+++ +++|+++|+++|+++|+||+|....|+.. . ..+..... + ....+++++||
T Consensus 181 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~--g-~~~~~~~~-~-------~~~~~i~~~s~ 246 (401)
T 2bwn_A 181 LIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPR--G-AGVAERDG-L-------MHRIDIFNGTL 246 (401)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTT--S-CCHHHHHT-C-------GGGCSEEEEES
T ss_pred EEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCC--C-ceeeeccC-c-------cccCcEEEeec
Confidence 9999999999999998 67888999999999999999995545433 1 12221111 0 11346889999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhc-c--c-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMS-S--F-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV 347 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~-~--~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (464)
||+||++| ||++++ +.+.+.+.... . + ..++++.+.++.++++... ...+++.++.++++++++.+.|++
T Consensus 247 sK~~~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~ 320 (401)
T 2bwn_A 247 AKAYGVFG---GYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLK--TAEGQKLRDAQQMHAKVLKMRLKA 320 (401)
T ss_dssp SSTTCSCC---EEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCC---CEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHH--hcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999888 999985 44555444321 1 1 1234566766666664321 112466777888899999999988
Q ss_pred CCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 348 AGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 348 ~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
.|+++.++.++ ++|+.++.. ....++...|++++||.++|+..|+.. +.+++||+++. .+++++++++++|
T Consensus 321 ~g~~~~~~~~~-~~~~~~~~~------~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l 393 (401)
T 2bwn_A 321 LGMPIIDHGSH-IVPVVIGDP------VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAM 393 (401)
T ss_dssp HTCCBCCCSSS-CEEEECCCH------HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHH
T ss_pred CCCcccCCCCC-eEEEEeCCh------HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHH
Confidence 88888877776 888988742 223357777766789999999877643 33689999985 6899999999999
Q ss_pred HHHHHh
Q 037587 426 KVFAQS 431 (464)
Q Consensus 426 ~~~l~~ 431 (464)
++++++
T Consensus 394 ~~~~~~ 399 (401)
T 2bwn_A 394 DLLWAR 399 (401)
T ss_dssp HHHC--
T ss_pred HHHHHh
Confidence 998754
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.1e-32 Score=275.81 Aligned_cols=341 Identities=13% Similarity=0.125 Sum_probs=240.6
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC-CCCcEEE
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF-DPNKLVL 114 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~~~i~i 114 (464)
.++|.|+.+.+...++.+.+++.+..... . ...........|.+..+..++|++++++++ . ++++|++
T Consensus 22 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~~~~v~~ 90 (406)
T 1kmj_A 22 LPLAYLDSAASAQKPSQVIDAEAEFYRHG--Y-AAVHRGIHTLSAQATEKMENVRKRASLFIN--------ARSAEELVF 90 (406)
T ss_dssp EECEECCTTTCCCCCHHHHHHHHHHHHHT--C-CCCSSCSSHHHHHHHHHHHHHHHHHHHHTT--------CSCGGGEEE
T ss_pred CceEEecCCccCCCCHHHHHHHHHHHHhh--c-CCCCCCcchHHHHHHHHHHHHHHHHHHHcC--------CCCCCeEEE
Confidence 35789998887765566666666542210 0 000000000112234466889999999875 4 5789999
Q ss_pred eCChHHHHHHHHHHh----cCCCCeEEEcCCCCCChhh----hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 115 TAGSTAANETLMFCL----ADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 115 t~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
|+|+++++..++.++ +++||+|+++.|+|++... .+... |++++.++.++ ++.+|++.+++.+.+
T Consensus 91 ~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~--~~~~d~~~l~~~l~~---- 163 (406)
T 1kmj_A 91 VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARV-GAELRVIPLNP--DGTLQLETLPTLFDE---- 163 (406)
T ss_dssp ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHH-TCEEEEECBCT--TSCBCGGGHHHHCCT----
T ss_pred eCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhC-CCEEEEEecCC--CCCcCHHHHHHHhcc----
Confidence 999999999999999 8999999999999976432 24445 99999999864 567899999998754
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|... .. . .++..+ +.++
T Consensus 164 --~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g---~~--~-~~~~~~-------------~~d~ 219 (406)
T 1kmj_A 164 --KTRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVM---HH--P-VDVQAL-------------DCDF 219 (406)
T ss_dssp --TEEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTT---TS--C-CCHHHH-------------TCSE
T ss_pred --CCeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcC---CC--C-Cccccc-------------CCCE
Confidence 7899999999999999998 788889999999999999999842 11 1 122222 4668
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc----------------------c-CCCChHHHHHHH-HHcCCchh
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS----------------------F-GLVSSQTQYLLS-RMLSDKKF 322 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~----------------------~-~~~s~~~q~~~~-~~l~~~~~ 322 (464)
++.|+||.+|++| +||++++ +.+.+.+..... + ...+.+.+.++. .+++...
T Consensus 220 ~~~s~~K~~g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~- 295 (406)
T 1kmj_A 220 YVFSGHKLYGPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVS- 295 (406)
T ss_dssp EEEEGGGTTSCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH-
T ss_pred EEEEchhccCCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHH-
Confidence 8999999999888 8999995 445444332211 1 113445555443 3433211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC--CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 323 TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS--NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~--~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
..++++.++.++++++++.+.|+++ |+++.++ .++++. +.++. . +..++... +.++||.++||..|.
T Consensus 296 -~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~-l~~~gi~v~~g~~~~ 365 (406)
T 1kmj_A 296 -ALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIA-FNLGK-H------HAYDVGSF-LDNYGIAVRTGHHCA 365 (406)
T ss_dssp -HHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEE-EEETT-C------CHHHHHHH-HHHTTEECEEECTTC
T ss_pred -HcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEE-EEECC-C------CHHHHHHH-HhhCCcEEEeccccc
Confidence 1245667778888999999999988 8888877 777555 45652 1 12245544 467899999987653
Q ss_pred C------CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 400 C------NEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 400 ~------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
. ..++++||+++. .++++++.++++|+++++..
T Consensus 366 ~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 366 MPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 1 225799999987 58999999999999988754
No 92
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=1.1e-32 Score=275.27 Aligned_cols=300 Identities=13% Similarity=0.130 Sum_probs=227.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEEe
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPN-KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPIH 162 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v~ 162 (464)
..++|++++++++ .+++ +|++|+|+++++..++.+++++||+|+++.|+|+.+. ..++.. |++++.++
T Consensus 53 ~~~l~~~la~~~~--------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 123 (396)
T 2ch1_A 53 MDEVKDGLRYIFQ--------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAERAVEMSERY-GADVRTIE 123 (396)
T ss_dssp HHHHHHHHHHHHT--------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHHHHHHHHHc-CCceEEec
Confidence 6789999999986 5677 8999999999999999999999999999999999874 345556 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
++. ++.+|++++++.+++. ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|. ++.. +
T Consensus 124 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~---~g~~--~ 188 (396)
T 2ch1_A 124 GPP--DRPFSLETLARAIELH-----QPKCLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVAS---LCGV--P 188 (396)
T ss_dssp CCT--TSCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTTB--C
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEcccc---ccCC--c
Confidence 864 5678999999998752 5789999999999999998 6778888999999999999998 4322 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----------------------
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM----------------------- 299 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~----------------------- 299 (464)
.++. ..+..+++.|++|.++ ++.++|++++++ .+.+.+...
T Consensus 189 -~~~~-------------~~~~d~~~~s~~K~~~-~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
T 2ch1_A 189 -FYMD-------------KWEIDAVYTGAQKVLG-APPGITPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDE 252 (396)
T ss_dssp -CCTT-------------TTTCCEEECCCC-CCC-CCSSCEEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS
T ss_pred -cchh-------------hcCcCEEEEcCCcccc-CCCCeEEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhcc
Confidence 1211 1133466789999775 334569999854 444443221
Q ss_pred --cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCcc----EEEEEecCcccccCC
Q 037587 300 --SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAG----LFCWVDMRHLLVSNT 373 (464)
Q Consensus 300 --~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~f~~~~l~~~~~~~~ 373 (464)
...++.+...|.++..+++... .+++++.++.++++++++.+.|+++|+++.++.++ .++++.++....
T Consensus 253 ~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--- 327 (396)
T 2ch1_A 253 PKRYHHTVASNLIFALREALAQIA--EEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVD--- 327 (396)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCC---
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCC---
Confidence 0113456677877777776421 34467778888999999999999889888877653 478888863221
Q ss_pred hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 374 FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 374 ~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
..++...|++++||.+++|..+. .++++||++ +. .+++++++++++|++++++...+
T Consensus 328 ---~~~~~~~L~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 386 (396)
T 2ch1_A 328 ---WWKVSQYAMNNFSLEVQGGLGPT--FGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHPD 386 (396)
T ss_dssp ---HHHHHHHHHHHHCBCCBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTT
T ss_pred ---HHHHHHHHHHhCCEEEecCcccc--CCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCcc
Confidence 23577777766799999987542 467999999 43 57899999999999999887644
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.7e-33 Score=280.20 Aligned_cols=334 Identities=16% Similarity=0.188 Sum_probs=234.4
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCC-CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQD-YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
+.|.|+.+....+++.+.+++.+........ + ......|++ ..+..++|++++++++ +++++|++|
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~--~---~~~~~~y~~~~~~~~~l~~~la~~~g--------~~~~~v~~~ 82 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQEN--G---PFSIAANQHIQQLIAQLRQALAETFN--------VDPNTITIT 82 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHHH--C---SSSHHHHHHHHHHHHHHHHHHHHHTT--------SCGGGEEEE
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhcc--C---CcchhhHHHHHHHHHHHHHHHHHHcC--------CCHHHEEEe
Confidence 5688887764444556666665542210000 0 000114543 2467899999999975 577899999
Q ss_pred CChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhh----cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 116 AGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 116 ~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|+++++..++.++ +++||+|+++.|+|+.+... ++.. |++++.++.+.++++.+|++.|++.+.+ ++
T Consensus 83 ~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~ 155 (390)
T 1elu_A 83 DNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARF-GITYRFFPVAATLNQGDAAAVLANHLGP------KT 155 (390)
T ss_dssp SSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHH-CCEEEEECCGGGSSSSCHHHHHHTTCCT------TE
T ss_pred CChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHh-CcEEEEEcCCCCCCccchHHHHHHhcCC------Cc
Confidence 99999999999999 89999999999999987543 3445 9999999986434678899999887753 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHh----hCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEE
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSK----SKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH 266 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~----~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi 266 (464)
++|++++|+||||.+++ +++|.++|+ ++|+++|+||+|. ++.. . .++ . ..+.++
T Consensus 156 ~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~---~g~~--~-~~~----~---------~~~~d~ 213 (390)
T 1elu_A 156 RLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQS---AGSL--P-LDF----S---------RLEVDY 213 (390)
T ss_dssp EEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTT---BTTB--C-CCT----T---------TSCCSE
T ss_pred eEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccc---cCCc--C-CCh----h---------hcCCCE
Confidence 99999999999999998 677888888 9999999999998 3222 1 111 1 124568
Q ss_pred EEcCCCcCCCCCccEEEEEEecCHHHHHHHHH------------------------hcccCCCChHHHHHHHHHcCCchh
Q 037587 267 IVYSLSKDFSMPGFRVGMIYSNNERVVSAATK------------------------MSSFGLVSSQTQYLLSRMLSDKKF 322 (464)
Q Consensus 267 ~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~------------------------~~~~~~~s~~~q~~~~~~l~~~~~ 322 (464)
++.|+||.++ +|.++||++++++ +.+.+.. ....++.+...+.++..++.....
T Consensus 214 ~~~s~~K~~~-~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~ 291 (390)
T 1elu_A 214 YAFTGHKWFA-GPAGVGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQR 291 (390)
T ss_dssp EEEESSSTTC-CCTTCEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHH
T ss_pred EEcccccccc-CCCceEEEEECHH-hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHH
Confidence 8999999442 5667999999654 3332221 111234566666666555542110
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee---cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 323 TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL---KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~---~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
..++++.++.++++++++.+.|+++ |+++. ++.++++. ++++.... ..++...| .++||.+++|.
T Consensus 292 -~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~l-~~~gi~v~~~~-- 360 (390)
T 1elu_A 292 -QGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVS-FTVDSPLG------HRAIVQKL-EEQRIYLRTIA-- 360 (390)
T ss_dssp -HCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEE-EEECSSSC------HHHHHHHH-HHTTEECEEET--
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEE-EEcCCCCC------HHHHHHHH-HHCCEEEEecC--
Confidence 1136777888889999999999987 88877 34677544 58763211 23466666 47799999886
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 399 HCNEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 399 ~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
.++++||+++. .+++++++++++|+++
T Consensus 361 ---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 ---DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp ---TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred ---CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 35789999954 6899999999998753
No 94
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=9.8e-32 Score=264.32 Aligned_cols=337 Identities=14% Similarity=0.116 Sum_probs=240.3
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
+++|+|+.+.+..+++.+.+++.+. ...|....|..++++++++++.+.+| +++++|++|
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~----------------~~~~~~~~g~~~~~~~~~~~l~~~~g----~~~~~v~~~ 72 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARD----------------NMTQHAGYGQDSHCAKAARLIGELLE----RPDADVHFI 72 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHH----------------TTCCCCSTTCSHHHHHHHHHHHHHHT----CTTSEEEEE
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHH----------------HhhccccccccHHHHHHHHHHHHHhC----CCCccEEEe
Confidence 3579999988776667777776653 12466667788999999999988776 678899999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh--cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh-hcCCceEE
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD--LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ-TLNLKVKG 192 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~-~~~~~~~~ 192 (464)
+|+++++..++.+++++||.|+++.|+|+.+... +... |++++.++.+ ++.+|+++|++.+++.. ..+.++++
T Consensus 73 ~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~ 148 (359)
T 1svv_A 73 SGGTQTNLIACSLALRPWEAVIATQLGHISTHETGAIEAT-GHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKL 148 (359)
T ss_dssp SCHHHHHHHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHT-TCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEE
T ss_pred CCchHHHHHHHHHHhCCCCEEEEcccchHHHHHHHHHhcC-CCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceE
Confidence 9999999999999999999999999999988763 5555 9999999874 57899999999997610 11224899
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++| ||||.++|.+++++|+++|+++|+++|+||+|.++.++..+.. .....+-. ...++..|++
T Consensus 149 v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~-----------~~d~~~~s~~ 215 (359)
T 1svv_A 149 VYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVND-LTLADIAR-----------LTDMFYIGAT 215 (359)
T ss_dssp EEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC-CCHHHHHH-----------HCSEEEEECT
T ss_pred EEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc-hhhhhhhh-----------cCCEEEEecc
Confidence 999999 7999999999999999999999999999999954323322101 11111100 1235678999
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHh---ccc-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKM---SSF-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~---~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
|..+ ...+|+++++++ +.+.+... ... ...+......+..++.+.. +++.++.++++++++.+.|+..
T Consensus 216 K~g~--~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~ 287 (359)
T 1svv_A 216 KAGG--MFGEALIILNDA-LKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNL-----FFELGAHSNKMAAILKAGLEAC 287 (359)
T ss_dssp TTTC--SSCEEEEECSGG-GCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTH-----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCC--CCceEEEEEccc-HHHHHHHHHhcCCcccccchhhHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHhccC
Confidence 9754 355899998554 33323222 111 1122233333445565532 4566777888889999999555
Q ss_pred CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 349 GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 349 g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
|+++..+.+++|+|++++. +++..+++++||.+.+.. ...++++||+++. .+++++++++++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~gi~v~~~~---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~ 353 (359)
T 1svv_A 288 GIRLAWPSASNQLFPILEN-----------TMIAELNNDFDMYTVEPL---KDGTCIMRLCTSWATEEKECHRFVEVLKR 353 (359)
T ss_dssp TCCBSSCCSSSEECBEEEH-----------HHHHHHTTTEECEEEEEE---TTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CeEEccCCccceEEEEcCH-----------HHHHHHHHhcCEEEEecc---cCCCceEEEEccCcCCHHHHHHHHHHHHH
Confidence 8888877778899988752 466777654499993211 1235689999875 689999999999998
Q ss_pred HHHh
Q 037587 428 FAQS 431 (464)
Q Consensus 428 ~l~~ 431 (464)
++++
T Consensus 354 ~~~~ 357 (359)
T 1svv_A 354 LVAS 357 (359)
T ss_dssp C---
T ss_pred HHhc
Confidence 8754
No 95
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=6.1e-33 Score=274.41 Aligned_cols=337 Identities=14% Similarity=0.098 Sum_probs=233.4
Q ss_pred CceEEeecccccc-cHHHHHHHHHhhhhhHHhhhcccccc--cccccCCCCCCcHHHHHH-HHHHHHHHcCCCCCCCCCc
Q 037587 36 SGIIQMGLAENQL-SFDLLESWLASNQEAVELKRNGESLF--RELALFQDYHGFPDAKKE-LVKLMARIRGNKVKFDPNK 111 (464)
Q Consensus 36 ~~~i~l~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~-ia~~~~~~~~~~~~~~~~~ 111 (464)
+++|.|+.+.+.. +++.+.+++.+...... . ... .....|.+..+..+++++ ++++++ .+ +
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~~~la~~~~--------~~--~ 71 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYS----V-CDFCTTGRLDEIKTPPIHDFIHNQLPKFLG--------CD--V 71 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC-------------------------CCHHHHHHTHHHHHTT--------SS--E
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcc----c-CCccccccchhhHHHHHHHHHHHHHHHHcC--------CC--E
Confidence 3567887754433 34566666665421100 0 000 011234455678999999 999985 33 9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe--cCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH--CSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
|++|+|+++++..++.+++++||+|++++|+|+++...+... |++++.++ .+ .++.+|+++|++.+++... .++
T Consensus 72 v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~-~~~ 147 (371)
T 2e7j_A 72 ARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERA-GLNIALVPKTDY--PDYAITPENFAQTIEETKK-RGE 147 (371)
T ss_dssp EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHT-TCEEEEECCCCT--TTCCCCHHHHHHHHHHHTT-TSC
T ss_pred EEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHc-CCeEEEeecccC--CCCCcCHHHHHHHHHhhcc-cCC
Confidence 999999999999999999999999999999999888887776 99999999 65 3578999999999875321 137
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++|++++|+||||.+++ +++|.++|+++|+++|+||+|+...+. .++..+ +..+++.
T Consensus 148 ~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~------~~~~~~-------------~~di~~~ 205 (371)
T 2e7j_A 148 VVLALITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP------VSLKEI-------------GADFIVG 205 (371)
T ss_dssp EEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC------CCHHHH-------------TCSEEEE
T ss_pred eEEEEEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC------CChhhc-------------CCCEEEe
Confidence 899999999999999998 477888899999999999999863221 122222 2348899
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHH-HHHhcc---------cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHH--HHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSA-ATKMSS---------FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRL--RKR 337 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~-~~~~~~---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~--~~~ 337 (464)
|+||+++ +|.|+||++++++ +.+. +..... .++.+...+.++..+++.. .. +.++.+ +++
T Consensus 206 s~sK~~~-~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~---~~~~~~~~~~~ 277 (371)
T 2e7j_A 206 SGHKSMA-ASGPIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV---RE---RIKRWDEEVEK 277 (371)
T ss_dssp EHHHHSS-CCSSCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH---HH---HGGGHHHHHHH
T ss_pred cCCcCCC-CCCCcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHH---HH---HHHHHHHHHHH
Confidence 9999998 4559999999665 3332 322222 2334444454444444321 11 445556 677
Q ss_pred HHHHHHHHHhCCCeeecCC--ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC----CCCCeEE-EEe
Q 037587 338 KEMLVSGLKVAGIRCLKSN--AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC----NEPGWFR-ICF 410 (464)
Q Consensus 338 ~~~l~~~l~~~g~~~~~~~--~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~----~~~~~~R-is~ 410 (464)
++++.+.|++.|+++..+. .+.++|++++ +..++...+. ++||.+.| ..|.. ..++++| |++
T Consensus 278 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~ 346 (371)
T 2e7j_A 278 ARRFAAEMEKLGIKQLGDNPHNHDLMFFHAE---------VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKL 346 (371)
T ss_dssp HHHHHHHHHHTTCEEESSSSCCSSEEEEECH---------HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEE
T ss_pred HHHHHHHHHHcCcEEecCCCccCceEEEECC---------CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEe
Confidence 7888888988888887653 2448999886 1224666665 78999988 43321 1257899 999
Q ss_pred ec--CCHHHHHHHHHHHHHHHHhh
Q 037587 411 AN--ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 411 ~~--~~~e~l~~~l~~l~~~l~~~ 432 (464)
+. .+++++++++++|+++++++
T Consensus 347 ~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 347 STYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred eccCCCHHHHHHHHHHHHHHHHhc
Confidence 85 58999999999999998764
No 96
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=2.2e-31 Score=268.73 Aligned_cols=345 Identities=16% Similarity=0.147 Sum_probs=241.6
Q ss_pred CCCceEEeecccc-cc-cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCC----cHHHHHHHHHHHHHHcCCCCCC
Q 037587 34 NPSGIIQMGLAEN-QL-SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHG----FPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 34 ~~~~~i~l~~~~n-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
++.++|||+.|.+ .+ +++.+.+++.+.... . + .....|....| ..+|++.|+++++ +
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~--~---~----~~~~~~~~~~G~~~~~~~l~~~la~~~g--------~ 124 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEK--F---G----SGTCGSRMLNGTFHDHMEVEQALRDFYG--------T 124 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHH--H---C----SCCCSCTTTTCCCHHHHHHHHHHHHHHT--------C
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHH--h---C----CCCcccccccCCcHHHHHHHHHHHHHhC--------C
Confidence 4567899999864 21 345666666554221 0 0 01112322333 3677777777774 3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+ +.++++++++++..++.+++++||.|+++.|+|..+...+... |++++.++. .|++.|++.+++.. .
T Consensus 125 ~--~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~-g~~~~~~~~-------~d~~~le~~l~~~~--~ 192 (427)
T 2w8t_A 125 T--GAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQG-NAEIVRFRH-------NSVEDLDKRLGRLP--K 192 (427)
T ss_dssp S--EEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHS-CSEEEEECT-------TCHHHHHHHHHTSC--S
T ss_pred C--ceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHc-CCeeEEeCC-------CCHHHHHHHHHhcc--C
Confidence 2 4555566667899999999999999999999999998888877 999988873 48899999886420 1
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
.++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.++.. ..++..... + ..+.+++
T Consensus 193 ~~~~~v~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~---g~~~~~~~~-~-------~~~~di~ 258 (427)
T 2w8t_A 193 EPAKLVVLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPN---GRGVYEAQG-L-------EGQIDFV 258 (427)
T ss_dssp SSCEEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTT---SCCHHHHTT-C-------TTCCSEE
T ss_pred CCCeEEEEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCC---CCchHhhcC-C-------CcCCcEE
Confidence 26889999999999999987 77888999999999999999998766532 122222211 0 2245889
Q ss_pred EcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-ccc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 268 VYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 268 l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
+.||||++|++| ||++++++ +.+.+... ..+ .+.++..+.++.++++... .+++.++.++++++++.+
T Consensus 259 ~~s~sK~~g~~g---G~v~~~~~-l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~----~~~~~~~~~~~~~~~l~~ 330 (427)
T 2w8t_A 259 VGTFSKSVGTVG---GFVVSNHP-KFEAVRLACRPYIFTASLPPSVVATATTSIRKLM----TAHEKRERLWSNARALHG 330 (427)
T ss_dssp EEESSSTTCSCC---EEEEECCT-TGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHHHH
T ss_pred EecchhhhccCC---CEEEeCHH-HHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHH
Confidence 999999999877 99999654 33333222 111 2355555555556655322 145667788888999999
Q ss_pred HHHhCCCeee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-CCCeEEEEeec-CCHHHHHH
Q 037587 344 GLKVAGIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN-EPGWFRICFAN-ITEETLQV 420 (464)
Q Consensus 344 ~l~~~g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~-~~~~~Ris~~~-~~~e~l~~ 420 (464)
.|++.|+++. ++..|.++|+.++.. ....+++..|+ ++||.+.|+..|+.. +.+++||+++. .+++++++
T Consensus 331 ~L~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~ 403 (427)
T 2w8t_A 331 GLKAMGFRLGTETCDSAIVAVMLEDQ------EQAAMMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQT 403 (427)
T ss_dssp HHHHHTCEESCSSCCSSEEEEEESSH------HHHHHHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHH
T ss_pred HHHHcCCcccCCCCCCCEEEEEECCH------HHHHHHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHH
Confidence 9988898887 551345889988642 22345777776 459999999877632 34689999986 68999999
Q ss_pred HHHHHHHHHHhhCccc
Q 037587 421 ALQRIKVFAQSCNPQM 436 (464)
Q Consensus 421 ~l~~l~~~l~~~~~~~ 436 (464)
++++|++++++.....
T Consensus 404 ~~~~l~~~l~~~~~~~ 419 (427)
T 2w8t_A 404 VLGMFQAAGRAVGVIG 419 (427)
T ss_dssp HHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHhCccc
Confidence 9999999998876543
No 97
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.3e-31 Score=267.12 Aligned_cols=299 Identities=16% Similarity=0.142 Sum_probs=223.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPN-KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPI 161 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v 161 (464)
+..+++++++++++ ++++ +|++|+|+++++..++.+++++||+|+++.|+|+.+. ..+... |++++.+
T Consensus 53 ~~~~l~~~la~~~g--------~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v 123 (393)
T 2huf_A 53 IMDDIKEGVRYLFQ--------TNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRY-GADVRVV 123 (393)
T ss_dssp HHHHHHHHHHHHHT--------CCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHc-CCeeEEE
Confidence 45788888888875 5565 8999999999999999999999999999999997642 233445 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
++++ ++.+|++.+++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+||++. ++..
T Consensus 124 ~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~---~~~~-- 188 (393)
T 2huf_A 124 KSKV--GQSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVAS---LGGA-- 188 (393)
T ss_dssp ECCT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---BTTB--
T ss_pred eCCC--CCCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEcccc---cCCC--
Confidence 9864 4578999999998752 6789999999999999998 6788889999999999999986 3322
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcC-CCCCccEEEEEEecCHHHHHHHHHh----ccc--------------
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKD-FSMPGFRVGMIYSNNERVVSAATKM----SSF-------------- 302 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~-~g~~GlRiG~l~~~~~~~~~~~~~~----~~~-------------- 302 (464)
. .++ . ..+.++++.|+||+ +|++|+ ||++++ +.+.+.+... .++
T Consensus 189 ~-~~~----~---------~~~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
T 2huf_A 189 P-MFM----D---------RWEIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCF 251 (393)
T ss_dssp C-CCT----T---------TTTCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCS
T ss_pred C-cch----h---------hcCccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccc
Confidence 1 111 1 12466889999997 567787 999995 5555555432 111
Q ss_pred -------CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ccEEEEEecCcccccC
Q 037587 303 -------GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN---AGLFCWVDMRHLLVSN 372 (464)
Q Consensus 303 -------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~f~~~~l~~~~~~~ 372 (464)
++.+...+.++.++++... ...+++.++.++++++++.+.|.+.|+++..+. ++++++++++....
T Consensus 252 ~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 327 (393)
T 2huf_A 252 GRPRIYHHTISSTLLYGLREAIAMAC--EEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVD-- 327 (393)
T ss_dssp SSCCCCSCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCC--
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCC--
Confidence 2345555665555654321 123666778888899999999998888877653 45588888863211
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
..++...|++++||.+++|..|. ..+++||++ +. .+++++++++++|++++++.+.
T Consensus 328 ----~~~~~~~L~~~~gi~v~~g~~~~--~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 328 ----WLKAAQYAMKTYLVEISGGLGPT--AGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp ----HHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred ----HHHHHHHHHHhCCEEEecCcccc--cCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 23577777766799999988653 367999999 53 4688999999999999987764
No 98
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.4e-31 Score=266.71 Aligned_cols=299 Identities=15% Similarity=0.075 Sum_probs=220.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEEe
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPIH 162 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v~ 162 (464)
+..++|++++++++ +++++|++|+|+++++..++.+++++||+|+++.|+|+++. ..+... |++++.++
T Consensus 43 ~~~~l~~~la~~~g--------~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 113 (392)
T 2z9v_A 43 LYEKVVDKAQKAMR--------LSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKGFGYWAKRY-SPHLLEIE 113 (392)
T ss_dssp HHHHHHHHHHHHTT--------CSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHH-CSCEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHHc-CCceEEee
Confidence 45778888888875 56789999999999999999999999999999999997652 233335 89999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+++ ++.+|++.+++.+++ ++++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.. .
T Consensus 114 ~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~---~g~~--~ 179 (392)
T 2z9v_A 114 VPY--NEAIDPQAVADMLKA----HPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSS---FGGM--K 179 (392)
T ss_dssp CCT--TSCCCHHHHHHHHHH----CTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTT---BTTB--S
T ss_pred CCC--CCCCCHHHHHHHHhc----CCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEcccc---cCCc--c
Confidence 874 346899999999864 236889999999999999987 6688889999999999999997 3222 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHh----------------------
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKM---------------------- 299 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~---------------------- 299 (464)
.++..+ +..+++.|+||++ |.+|+ ||+++++ .+.+.++..
T Consensus 180 -~~~~~~-------------~~d~~~~s~sK~~~~~~g~--G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 242 (392)
T 2z9v_A 180 -THPEDC-------------KADIYVTGPNKCLGAPPGL--TMMGVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDK 242 (392)
T ss_dssp -CCGGGG-------------TCSEEEECSSSTTCCCSCC--EEEEECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTS
T ss_pred -cccccc-------------cceEEEecCcccccCCCce--eEEEECH-HHHHHhhhccCCCCceeccHHHHHhhhcccC
Confidence 121111 3457889999965 44564 9999954 444444321
Q ss_pred cccCCCChHHHHHHHHHcCCchhhHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeec-CC---ccEEEEEecCcccccCCh
Q 037587 300 SSFGLVSSQTQYLLSRMLSDKKFTCNY-MKENRKRLRKRKEMLVSGLKVAGIRCLK-SN---AGLFCWVDMRHLLVSNTF 374 (464)
Q Consensus 300 ~~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~---~g~f~~~~l~~~~~~~~~ 374 (464)
...++.+...+.++..+++.. .+. +++.++.++++++++.+.|+++|+++.. +. .+.++|+.++....
T Consensus 243 ~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 315 (392)
T 2z9v_A 243 PFPFTPSVSEINGLDVALDLY---LNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVD---- 315 (392)
T ss_dssp CCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCC----
T ss_pred CCCCCCCHHHHHHHHHHHHHH---HhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCC----
Confidence 112234555555555555421 333 5667788888999999999888887765 32 45688888863211
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-e-cCCHHHHHHHHHHHHHHHHhhCc
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-A-NITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~-~~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
..++...|.+++||.+++|..+. .++++||++ + ..+++++++++++|++++++.+.
T Consensus 316 --~~~l~~~L~~~~gi~v~~g~~~~--~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~~ 373 (392)
T 2z9v_A 316 --EKALRQAARARYGVVFSSGRGET--LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAGR 373 (392)
T ss_dssp --HHHHHHHHHHHHCEECEECCGGG--TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred --HHHHHHHHHhcCCEEEecCCCCC--CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcCC
Confidence 23577777654599999987543 467999995 5 46899999999999999988774
No 99
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.9e-31 Score=264.21 Aligned_cols=295 Identities=15% Similarity=0.182 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCCCChhhhccc--CCCcEEEEE
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----DPGDAFLLPTPYYPGFDRDLKW--RPGVEIVPI 161 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~--~~g~~~~~v 161 (464)
+++++++++++ +++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...+.. ..|++++.+
T Consensus 47 ~~~~~la~~~~--------~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v 118 (382)
T 4hvk_A 47 EAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYI 118 (382)
T ss_dssp HHHHHHHHHTT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcC--------CCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEe
Confidence 56666666554 678899999999999999999988 9999999999999987665432 139999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
++++ ++.+|+++|++.+.+ ++++|++++|+||||.+++ +++|.++|+++|+ +|+|++|+. +..
T Consensus 119 ~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~---~~~-- 181 (382)
T 4hvk_A 119 PVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASV---GQI-- 181 (382)
T ss_dssp CBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTB---TTB--
T ss_pred ccCC--CCCcCHHHHHHHhcc------CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhc---CCC--
Confidence 9873 567899999998754 7899999999999999988 5678889999999 999999873 221
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHH-HHHHH-----HHhcccCCCChHHHHHHHH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNER-VVSAA-----TKMSSFGLVSSQTQYLLSR 315 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~-~~~~~-----~~~~~~~~~s~~~q~~~~~ 315 (464)
. .+.... +..+++.|+||.+|.+| +|+++++++. +.... ......++.+...+.++..
T Consensus 182 ~-~~~~~~-------------~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (382)
T 4hvk_A 182 E-VDVEKI-------------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGK 245 (382)
T ss_dssp C-CCHHHH-------------TCSEEEEESGGGTSCTT--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHH
T ss_pred C-CCchhc-------------CCCEEEEeHHHhcCCCc--eEEEEEcCccCcCcccccCCCcCccccCCcCHHHHHHHHH
Confidence 1 122111 45688999999988667 5666664432 00000 0001123345566666656
Q ss_pred HcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---cEEEEEecCcccccCChhHHHHHHHHHHHhcCeE
Q 037587 316 MLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNA---GLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~ 391 (464)
++. +..+++++.++.++++++++.+.|+++ |+.+..+.+ +.++++.++.. ...++...| .++||.
T Consensus 246 al~---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~ 314 (382)
T 4hvk_A 246 AAE---ITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI-------EGESIVLSL-DMAGIQ 314 (382)
T ss_dssp HHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTC-------CHHHHHHHH-HHTTCB
T ss_pred HHH---HHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCC-------CHHHHHHHH-HHCCEE
Confidence 554 224567888888999999999999987 787776543 23666666521 122455555 567999
Q ss_pred EeCCCCCCCCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 392 ISPGSSCHCNE-----------------PGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 392 v~pg~~f~~~~-----------------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+++|..|.... ++++||+++. .+++++++++++|++++++.+.
T Consensus 315 v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 315 ASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp CBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99998776532 5799999986 6899999999999999987654
No 100
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=6.2e-32 Score=265.12 Aligned_cols=294 Identities=14% Similarity=0.087 Sum_probs=218.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEEe
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPIH 162 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v~ 162 (464)
+..++|++++++++ ++++++++|+|+++++..++.+++++||+|+++.|+|+++. ..+... |++++.++
T Consensus 35 ~~~~l~~~la~~~g--------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 105 (352)
T 1iug_A 35 VFLKARGLLREAFR--------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSERFYEIALEA-GLVVERLD 105 (352)
T ss_dssp HHHHHHHHHHHHHT--------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEEE
T ss_pred HHHHHHHHHHHHhC--------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHHHHHHHHHc-CCceEEEe
Confidence 45788999999886 56789999999999999999999999999999999998764 333445 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEeccccccccCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Deay~~~~~~~~~ 240 (464)
+++ ++.+|++++++ +++++|++++|+||||.+++ +++|.++|+++ |+++|+||+|. ++..
T Consensus 106 ~~~--~~~~d~~~l~~---------~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~---~~~~- 167 (352)
T 1iug_A 106 YPY--GDTPRPEDVAK---------EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTS---LLVG- 167 (352)
T ss_dssp CCT--TCCCCTTTSCC---------SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTT---BTTB-
T ss_pred CCC--CCCCCHHHHhc---------cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCcc---ccCc-
Confidence 864 45678887765 27889999999999999988 66788899999 99999999997 3322
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHH------------HHHH---hcccCC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVS------------AATK---MSSFGL 304 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~------------~~~~---~~~~~~ 304 (464)
. .++..+ +..+++.|+||.+ |.+| +||++++++.+.. .... ....++
T Consensus 168 -~-~~~~~~-------------~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (352)
T 1iug_A 168 -E-VALEAM-------------GVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWT 230 (352)
T ss_dssp -C-CCSGGG-------------TCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSC
T ss_pred -c-eecccc-------------CeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCC
Confidence 1 111111 3457789999954 4344 7999986553321 1111 122345
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ccEEEEEecCcccccCChhHHHHHHHH
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN-AGLFCWVDMRHLLVSNTFEAEKELWKK 383 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~f~~~~l~~~~~~~~~~~~~~l~~~ 383 (464)
.+...+.++..+++.. .+++++.++.++++++++.+.|++.|+++..+. .+.++|++++.... ..+++..
T Consensus 231 ~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 301 (352)
T 1iug_A 231 PAINLVLAVAAVLEEV---LPRLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVP------YARVKEA 301 (352)
T ss_dssp CCHHHHHHHHHHHHHH---GGGHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCC------HHHHHHH
T ss_pred CCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCC------HHHHHHH
Confidence 6667777666666532 222667788888999999999998888887764 56689999874211 2346666
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+. ++||.+++|..+ ..++++||+++. .+++++++++++|++++++.-+
T Consensus 302 l~-~~gi~v~~~~~~--~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 350 (352)
T 1iug_A 302 FA-QRGAVIAGGQGP--LKGKVFRLSLMGAYDRYEALGVAGMFREVLEEILP 350 (352)
T ss_dssp HH-TTTEECEECCGG--GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC-
T ss_pred HH-HCCEEEEeCCCc--cCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhcC
Confidence 65 669999998732 246799999986 4799999999999999887643
No 101
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.98 E-value=9.4e-32 Score=266.83 Aligned_cols=299 Identities=15% Similarity=0.170 Sum_probs=220.7
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc----CCCCeEEEcCCCCCChhhhccc--CCCcEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA----DPGDAFLLPTPYYPGFDRDLKW--RPGVEI 158 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~~--~~g~~~ 158 (464)
...+++++++++++ +++++|++|+|+++++.+++.++. ++||.|++++|+|+.+...+.. ..|+++
T Consensus 44 ~~~~l~~~la~~~g--------~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 115 (382)
T 4eb5_A 44 AVQEAREKVAKLVN--------GGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEV 115 (382)
T ss_dssp HHHHHHHHHHHHHT--------CTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEE
T ss_pred HHHHHHHHHHHHhC--------CCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEE
Confidence 35678888888875 567899999999999999999998 8999999999999877655432 139999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
+.+++++ ++.+|++++++.+++ ++++|++++|+||||.+++ +++|+++|+++|++ |+||+|+ ++.
T Consensus 116 ~~v~~~~--~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~---~g~ 180 (382)
T 4eb5_A 116 EYIPVGK--YGEVDVSFIDQKLRD------DTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATAS---VGQ 180 (382)
T ss_dssp EEECBCT--TSCBCHHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTT---BTT
T ss_pred EEeccCC--CCccCHHHHHHHhcC------CCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchh---cCC
Confidence 9999874 467899999988754 7899999999999999988 56789999999999 9999998 432
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHH-HHHHHH-----HhcccCCCChHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNER-VVSAAT-----KMSSFGLVSSQTQYL 312 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~-~~~~~~-----~~~~~~~~s~~~q~~ 312 (464)
. . .++..+ +.++++.|+||.+|++| +||++++++. +..... .....++.+...+.+
T Consensus 181 ~--~-~~~~~~-------------~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (382)
T 4eb5_A 181 I--E-VDVEKI-------------GADMLTISSNDIYGPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVG 242 (382)
T ss_dssp B--C-CCHHHH-------------TCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHH
T ss_pred c--c-cCcccc-------------CCCEEEeehHHhcCCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHH
Confidence 2 1 122222 35678999999988667 6999886542 211110 011223445555665
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---cEEEEEecCcccccCChhHHHHHHHHHHHhc
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNA---GLFCWVDMRHLLVSNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~ 388 (464)
+..+++. +.+.+++.++.++++++++.+.|+++ |+++..+.+ +.++++.++. .. ..++...|. ++
T Consensus 243 ~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~l~-~~ 311 (382)
T 4eb5_A 243 FGKAAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY-IE------GESIVLSLD-MA 311 (382)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT-SC------HHHHHHHHH-HH
T ss_pred HHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC-cC------HHHHHHHHH-HC
Confidence 5555542 13356778888899999999999987 787776541 3367777762 11 224666664 67
Q ss_pred CeEEeCCCCCCCC-----------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 389 GLNISPGSSCHCN-----------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 389 gI~v~pg~~f~~~-----------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
||.+++|..|... ..+++||+++. .+++++++++++|++++++.+..
T Consensus 312 gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4eb5_A 312 GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999865431 25799999985 58999999999999999876653
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.98 E-value=9.6e-31 Score=262.55 Aligned_cols=340 Identities=17% Similarity=0.164 Sum_probs=233.7
Q ss_pred CCCCceEEeecccccc---cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 33 HNPSGIIQMGLAENQL---SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 33 ~~~~~~i~l~~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
.....+|||+.+ +.+ +++.+.+++.+.... -+.........|+......+++++++++++ .+
T Consensus 56 ~~g~~~ld~~s~-~~l~~~~~p~v~~a~~~~l~~-----~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~- 120 (409)
T 3kki_A 56 QASPDDIILQSN-DYLALANHPLIKARLAKSLLE-----EQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FD- 120 (409)
T ss_dssp CCCTTSEECCCS-CTTCCTTCHHHHHHHHHHHHS-----CCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CS-
T ss_pred CCCCceEEeecc-CccCCcCCHHHHHHHHHHHHH-----cCCCCCccccccCCcHHHHHHHHHHHHHhC--------CC-
Confidence 345678999887 332 235555555543211 000000011122333345788888888875 22
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..+ +++++++++..++.+++++||.|+++.|+|+.+...+... |++++.++. .|+++|++.+.+. +
T Consensus 121 ~~i-~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~~~~~-------~d~~~le~~l~~~-----~ 186 (409)
T 3kki_A 121 ECL-LSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYA-NAQAHPFMH-------NNCDHLRMLIQRH-----G 186 (409)
T ss_dssp EEE-EESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHT-TCEEEEECT-------TCHHHHHHHHHHH-----C
T ss_pred eEE-EecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHc-CCeEEEecC-------CCHHHHHHHHHhc-----C
Confidence 334 4555579999999999999999999999999888888776 999988764 4789999998762 4
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
+++|++++|+||||.+++ +++|+++|+++|+++|+||+|....++.. . ........ . ..+.++++.
T Consensus 187 ~~~vi~~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~--g-~~~~~~~~-~-------~~~~di~~~ 252 (409)
T 3kki_A 187 PGIIVVDSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPN--G-AGLLAELG-L-------TREVHFMTA 252 (409)
T ss_dssp SCEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGG--G-CCHHHHHT-C-------GGGCSEEEE
T ss_pred CeEEEECCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCC--C-CcchhhcC-C-------CCCCCEEEe
Confidence 689999999999999998 78899999999999999999987555432 1 11111111 0 113458899
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHh-cc--cC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKM-SS--FG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~--~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
||||++|++| ||++++++.+ +.+... .. +. ..+++.+.++.+.++..+ ..++.++.++++++++.+.|
T Consensus 253 s~sK~~~~~g---g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~----~~~~~~~~~~~~~~~l~~~L 324 (409)
T 3kki_A 253 SLAKTFAYRA---GAIWCNNEVN-RCVPFISYPAIFSSTLLPYEAAGLETTLEIIE----SADNRRQHLDRMARKLRIGL 324 (409)
T ss_dssp ESSSTTCSSC---EEEEESSSGG-GTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHH
T ss_pred ecchhhCCCc---eEEEECHHHH-HHHHHhCcCccccCCCcHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHH
Confidence 9999998664 9999966543 333221 11 12 245555556655554322 12567788889999999999
Q ss_pred HhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHH
Q 037587 346 KVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQ 423 (464)
Q Consensus 346 ~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~ 423 (464)
++.|+++. + .++++|+.++.. ....+++..|+ ++||.+.|+..+. ..+.+++||+++. .++++++++++
T Consensus 325 ~~~g~~~~-~-~~~~~~~~~~~~------~~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~ 395 (409)
T 3kki_A 325 SQLGLTIR-S-ESQIIGLETGDE------RNTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIE 395 (409)
T ss_dssp HTTTCCCC-C-SSSEEEEEEESH------HHHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHH
T ss_pred HHcCCccC-C-CCCEEEEEeCCH------HHHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHH
Confidence 99988776 3 556888888642 12335777776 4599998865432 2345799999985 68999999999
Q ss_pred HHHHHHHhh
Q 037587 424 RIKVFAQSC 432 (464)
Q Consensus 424 ~l~~~l~~~ 432 (464)
+|+++++..
T Consensus 396 ~l~~~l~~~ 404 (409)
T 3kki_A 396 VCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHhcC
Confidence 999998764
No 103
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.98 E-value=5.4e-31 Score=263.85 Aligned_cols=286 Identities=16% Similarity=0.158 Sum_probs=208.5
Q ss_pred cccCCCCCCcH---HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----h
Q 037587 77 LALFQDYHGFP---DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----D 149 (464)
Q Consensus 77 ~~~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~ 149 (464)
...|+. .|.+ +|+++++++++ . +++++++|+++++..++.+++++||.|+++.|+|+.+.. .
T Consensus 53 ~~~Y~~-~~~~~~~~l~~~ia~~~g--------~--~~~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~ 121 (404)
T 1e5e_A 53 GYIYTR-LGNPTVSNLEGKIAFLEK--------T--EACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHA 121 (404)
T ss_dssp SCCBTT-TCCHHHHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTH
T ss_pred CccccC-CcChHHHHHHHHHHHHhC--------C--CcEEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHH
Confidence 345776 4556 89999999985 2 367888888999999999999999999999999998877 5
Q ss_pred cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh-CCeEEEEe
Q 037587 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS-KRIHIVSD 228 (464)
Q Consensus 150 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~-~~~~lI~D 228 (464)
++.. |++++.++++ |++++++.+++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|
T Consensus 122 ~~~~-g~~~~~v~~~-------d~~~l~~~i~~------~t~~v~l~~p~NptG~v~~---l~~i~~la~~~~~~~li~D 184 (404)
T 1e5e_A 122 LTKF-GIQVDFINTA-------IPGEVKKHMKP------NTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIAD 184 (404)
T ss_dssp HHHT-TCEEEEECTT-------STTHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEE
T ss_pred HHHc-CCEEEEECCC-------CHHHHHHhcCC------CCcEEEEECCCCCCCcccC---HHHHHHHHHhhcCCEEEEE
Confidence 6666 9999999864 67888887754 7899999999999999986 7889999999 99999999
Q ss_pred ccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcccC---C
Q 037587 229 EIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSSFG---L 304 (464)
Q Consensus 229 eay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~~~---~ 304 (464)
|+|..+.+. . ++ .+ ++++++.|+||.|+++|+|+ ||++++++.+.+.+......+ .
T Consensus 185 e~~~~~~~~-~-----~~-~~-------------~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~g~~ 244 (404)
T 1e5e_A 185 NTFCSPMIT-N-----PV-DF-------------GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSV 244 (404)
T ss_dssp CTTTCTTTC-C-----GG-GG-------------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCC
T ss_pred CCCchhhhC-C-----cc-cc-------------CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCCCCC
Confidence 999975442 1 11 12 56789999999999999998 999996654443555544432 4
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeeecC----CccEEEEEec
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA---------------GIRCLKS----NAGLFCWVDM 365 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------g~~~~~~----~~g~f~~~~l 365 (464)
++++.|.++...++... ...+...+....+.+.+++. |+++.++ .++++.| ++
T Consensus 245 ~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~~ 316 (404)
T 1e5e_A 245 ISPHDAWLITRGLSTLN-------IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITF-IL 316 (404)
T ss_dssp CCHHHHHHHHHHHTTHH-------HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEE-EE
T ss_pred CCHHHHHHHHHhHhHHH-------HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEE-Ee
Confidence 67788888888887632 12222233444444455443 2222222 2776666 77
Q ss_pred CcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-----------------------CC--CCeEEEEeecCCHHHHHH
Q 037587 366 RHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-----------------------NE--PGWFRICFANITEETLQV 420 (464)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-----------------------~~--~~~~Ris~~~~~~e~l~~ 420 (464)
+.. .+.+..++++.|| +.+|..|+. .+ ++++|||++. |+++.
T Consensus 317 ~~~---------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~---e~~~~ 383 (404)
T 1e5e_A 317 KSG---------FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI---EDADE 383 (404)
T ss_dssp TTH---------HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS---SCHHH
T ss_pred CCC---------HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHH
Confidence 631 1234567788899 556665552 12 5799999995 77888
Q ss_pred HHHHHHHHHHh
Q 037587 421 ALQRIKVFAQS 431 (464)
Q Consensus 421 ~l~~l~~~l~~ 431 (464)
++++|+++++.
T Consensus 384 li~~l~~al~~ 394 (404)
T 1e5e_A 384 LIADFKQGLDA 394 (404)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887764
No 104
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.98 E-value=4.9e-31 Score=261.73 Aligned_cols=296 Identities=16% Similarity=0.193 Sum_probs=220.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDP--NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v 161 (464)
..+++++++++++ +++ ++|++|+|+++++. ++.+++++||.|++++|+|.+ +...+... |++++.+
T Consensus 37 ~~~~~~~la~~~~--------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v 106 (384)
T 3zrp_A 37 LAYSLKGLRYVMG--------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVVSNGVFGDRWEQIFKRY-PVNVKVL 106 (384)
T ss_dssp HHHHHHHHHHHHT--------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEECSSHHHHHHHHHHTTS-SCEEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEecCCcchHHHHHHHHHc-CCcEEEe
Confidence 4566777777765 455 88999999999999 999999999999999999954 44445555 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+++. ++.+|++++++.+.+ .++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. ...
T Consensus 107 ~~~~--~~~~d~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---~~~-- 171 (384)
T 3zrp_A 107 RPSP--GDYVKPGEVEEEVRK-----SEYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSV---GAE-- 171 (384)
T ss_dssp CCST--TCCCCHHHHHHHHHH-----SCEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTT---TTS--
T ss_pred cCCC--CCCCCHHHHHHHHHh-----CCCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccc---cCc--
Confidence 9875 457899999999875 26899999999999999988 67789999999999999999873 221
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH------------HHHh----------
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA------------ATKM---------- 299 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~------------~~~~---------- 299 (464)
. .++. ..+.++++.|+||.++ ++.++||++++++.+... ....
T Consensus 172 ~-~~~~-------------~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T 3zrp_A 172 E-VKAE-------------EWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEG 236 (384)
T ss_dssp C-CCTT-------------TTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTT
T ss_pred c-cccc-------------ccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhccc
Confidence 1 1111 1245688999999885 334599999965543332 0111
Q ss_pred -ccc-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccEEEEEecCcccccCC
Q 037587 300 -SSF-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGLFCWVDMRHLLVSNT 373 (464)
Q Consensus 300 -~~~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~f~~~~l~~~~~~~~ 373 (464)
... ++.+...+.++..++.... ...+++.++.++++++++.+.|+++|+++..+. +++++|+.++. ..
T Consensus 237 ~~~~~g~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~-~~--- 310 (384)
T 3zrp_A 237 KAAYFATPPVHVILQLAEAFRLIE--KEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKV-AD--- 310 (384)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSS-SC---
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCC-CC---
Confidence 111 2455556665555554211 222677788888999999999999888887766 56688898875 11
Q ss_pred hhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 374 FEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 374 ~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
..++...+. ++||.+++|..+.. +++||+++. .+++++++++++|++++++.+.
T Consensus 311 ---~~~~~~~l~-~~gi~v~~g~~~~~---~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~ 365 (384)
T 3zrp_A 311 ---PQKVLAGTV-NEGVEFAPGVHPAF---KYFRIGHMGWVTPNDAIIAISVIERTLRKLGE 365 (384)
T ss_dssp ---HHHHHHHHH-TTTCCCEECCCTTC---CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHH-HCCEEEecCCCCCc---CEEEEeccccCCHHHHHHHHHHHHHHHHHcCC
Confidence 224666665 56999999875432 899999875 6899999999999999998875
No 105
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.98 E-value=1.3e-31 Score=262.70 Aligned_cols=330 Identities=13% Similarity=0.137 Sum_probs=221.6
Q ss_pred CCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE
Q 037587 35 PSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL 114 (464)
Q Consensus 35 ~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i 114 (464)
|-.+|+|+.|+|++|.+.+.+++.+.. .....|.+..+..+||+++|++++ . +++++
T Consensus 2 ~~~~i~~~~~~~~~p~~~~~~a~~~~~-------------~~~~~y~~~~~~~~l~~~la~~~g--------~--~~~~~ 58 (347)
T 1jg8_A 2 PHMMIDLRSDTVTKPTEEMRKAMAQAE-------------VGDDVYGEDPTINELERLAAETFG--------K--EAALF 58 (347)
T ss_dssp ---CEECSCGGGCCCCHHHHHHHHTCC-------------CCCGGGTCCHHHHHHHHHHHHHHT--------C--SEEEE
T ss_pred CceEEEeccccCCCCCHHHHHHHhcCC-------------CCCcccCCChHHHHHHHHHHHHhC--------C--ceEEE
Confidence 346799999999998777777766531 112357666678899999999985 2 36778
Q ss_pred eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 115 TAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 115 t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++|+++++.+++.+++++||+|+++.|+|..... .+... |++++.+ .+ .++.+|++++++++++.....++++
T Consensus 59 ~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~ 134 (347)
T 1jg8_A 59 VPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLS-GVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTS 134 (347)
T ss_dssp ESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHT-CCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEE
T ss_pred ecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccccchhhcc-CeEEEEe-cC--CCCccCHHHHHHHhccccccccCce
Confidence 8888899999999999999999999999864332 34445 9998888 43 2456899999988742000012689
Q ss_pred EEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEeccccccc--cCCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 192 GVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV--FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 192 ~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
+|++++||||| |.++|.+++++|+++|+++|+++|+||+|.... +.+. +...+... .+. ++
T Consensus 135 ~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~---------~d~--~~ 198 (347)
T 1jg8_A 135 LIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV-----PVKEYAGY---------ADS--VM 198 (347)
T ss_dssp EEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC-----CHHHHHHT---------CSE--EE
T ss_pred EEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC-----ChHHhccc---------ccE--EE
Confidence 99999999999 999999999999999999999999999875211 1122 22222221 133 33
Q ss_pred cCCCcCCCCCccEEEE-EEecCHHHHHHHHHhccc-C---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGM-IYSNNERVVSAATKMSSF-G---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVS 343 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~-l~~~~~~~~~~~~~~~~~-~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (464)
.|+||.+|++ +|+ +++ ++.+.+.+...... . ..+.+.+.++...++.. .+.+++ . .++++.+.+
T Consensus 199 ~s~sK~l~~~---~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~---~-~~~~~~l~~ 267 (347)
T 1jg8_A 199 FCLSKGLCAP---VGSVVVG-DRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKM---VDRLKE---D-HENARFLAL 267 (347)
T ss_dssp EESSSTTCCS---SCEEEEE-CHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHS---STTHHH---H-HHHHHHHHH
T ss_pred EecccccCCC---ceEEEEc-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH---HHHHHH---H-HHHHHHHHH
Confidence 4899999743 574 555 45454444333222 1 12334444444444321 111221 2 235577777
Q ss_pred HHHhCCCeee--cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHH
Q 037587 344 GLKVAGIRCL--KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQV 420 (464)
Q Consensus 344 ~l~~~g~~~~--~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~ 420 (464)
.|+++|+.+. ++.+ .|+|++++.. . .+..+++..|. ++||.++++. .+++|++++. .+++++++
T Consensus 268 ~L~~~~~~~~~~~~~~-~~~~~~~~~~--~---~~~~~~~~~l~-~~gi~v~~~~------~~~iRl~~~~~~~~e~i~~ 334 (347)
T 1jg8_A 268 KLKEIGYSVNPEDVKT-NMVILRTDNL--K---VNAHGFIEALR-NSGVLANAVS------DTEIRLVTHKDVSRNDIEE 334 (347)
T ss_dssp HHHHHTCBCCGGGCCS-SEEEEECTTS--S---SCHHHHHHHHH-HHTEECEEEE------TTEEEEECCTTSCHHHHHH
T ss_pred HHHhcCceeccCCCcc-eEEEEEcccc--c---CCHHHHHHHHH-HCCCEEecCC------CCeEEEEeCCCCCHHHHHH
Confidence 8877677652 3455 4799998731 0 11235777775 6799999753 4689999964 68999999
Q ss_pred HHHHHHHHHHh
Q 037587 421 ALQRIKVFAQS 431 (464)
Q Consensus 421 ~l~~l~~~l~~ 431 (464)
++++|++++++
T Consensus 335 ~~~~l~~~l~~ 345 (347)
T 1jg8_A 335 ALNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 106
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.98 E-value=1.3e-31 Score=270.15 Aligned_cols=350 Identities=11% Similarity=0.089 Sum_probs=226.6
Q ss_pred CCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccc-cccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 33 HNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRE-LALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 33 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
.....+|||+.+.+ ++ +++.+.+++.+.... ... ...|.+..+..+|+++|++++. + .
T Consensus 38 ~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~l~~~la~~~~---~---~- 100 (426)
T 1sff_A 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK----------LSHTCFQVLAYEPYLELCEIMNQKVP---G---D- 100 (426)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTT----------CSCCCTTTEECHHHHHHHHHHHHHSS---C---S-
T ss_pred CCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHh----------CCCccccccCCHHHHHHHHHHHHhCC---c---c-
Confidence 34556899988775 33 456666666554211 011 1134455678899999999973 1 1
Q ss_pred CCCcEEEeCChHHHHHHHHH---HhcCCCCeEEEcCCCCCChhh-hcccCCCcE-------------EEEEecCC---CC
Q 037587 108 DPNKLVLTAGSTAANETLMF---CLADPGDAFLLPTPYYPGFDR-DLKWRPGVE-------------IVPIHCSS---SN 167 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~---~l~~~gd~Vlv~~p~y~~~~~-~~~~~~g~~-------------~~~v~~~~---~~ 167 (464)
.+++|++|+|+++++..++. +++++| .|++++|+|+++.. .+... |.+ ++.++++. ..
T Consensus 101 ~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~-g~~~~~~~~~~~~~~~v~~v~~~~~~~~~ 178 (426)
T 1sff_A 101 FAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALT-GKVNPYSAGMGLMPGHVYRALYPCPLHGI 178 (426)
T ss_dssp SCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHS-SCCTTTTTTSCCCCSSEEEECCCBGGGTB
T ss_pred cccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhc-CCccccccccCCCCCCcEEeCCCcccccc
Confidence 34899999999999999988 677776 89999999987653 33322 432 66666642 12
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEE-eCCCCCCC-CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLI-TNPSNPLG-TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil-~~P~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
++.+|++.|++.+++. ..+.++++|++ ++|+| || .++|.+++++|.++|+++|+++|+||+|.++.+.+. . ..
T Consensus 179 ~~~~d~~~l~~~l~~~-~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~-~~ 253 (426)
T 1sff_A 179 SEDDAIASIHRIFKND-AAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT--L-FA 253 (426)
T ss_dssp CHHHHHHHHHHHHHHT-CCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-SG
T ss_pred chHHHHHHHHHHHHhc-cCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc--h-hh
Confidence 3457899999888631 01126776666 35578 99 788999999999999999999999999997544332 1 11
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCchhh
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDKKFT 323 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~~ 323 (464)
+ ... +..+.+.||||++|. |+|+||+++++ .+.+.+... ...+..+++.|.++.++++....
T Consensus 254 ~-~~~------------~~~~di~s~sK~~~~-GlriG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~- 317 (426)
T 1sff_A 254 M-EQM------------GVAPDLTTFAKSIAG-GFPLAGVTGRA-EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ- 317 (426)
T ss_dssp G-GGT------------TSCCSEEEECGGGGT-SSCCEEEEEEH-HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-
T ss_pred h-hhc------------CCCCCEEEEcccccC-CCceEEEEEcH-HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh-
Confidence 1 111 112224499999995 99999999954 444433321 22234678888888866652110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC----C-CeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKVA----G-IRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~~----g-~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
....+.+++.++++.+.|.++ . +...++. |+|+|++++..... +......+++..++ ++||.+.||.
T Consensus 318 ----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~ 391 (426)
T 1sff_A 318 ----ENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCG 391 (426)
T ss_dssp ----TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEES
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCC
Confidence 012233333444444444432 2 2333445 56999998532110 11123345777775 5799999987
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.| ++++||+++. .+++++++++++|++++++.
T Consensus 392 ~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 392 PY----YNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp TT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 64 5789999973 78999999999999998764
No 107
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.98 E-value=4e-31 Score=264.82 Aligned_cols=340 Identities=15% Similarity=0.104 Sum_probs=231.0
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCC---CcHH--HHHHHH-HHHHHHcCCCCCCCC
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYH---GFPD--AKKELV-KLMARIRGNKVKFDP 109 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--lr~~ia-~~~~~~~~~~~~~~~ 109 (464)
.++|+|+.++|++ ++.+.+++.+.... .....|+... |.+. +++.++ +.+.+.++ +++
T Consensus 23 ~~~i~~~~~~~~~-~~~v~~a~~~~~~~-----------~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g----~~~ 86 (407)
T 2dkj_A 23 REGLELIASENFV-SKQVREAVGSVLTN-----------KYAEGYPGARYYGGCEVIDRVESLAIERAKALFG----AAW 86 (407)
T ss_dssp HTSEECCTTCCCC-CHHHHHHHTSGGGG-----------CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSE
T ss_pred hcceeeccCCCCC-CHHHHHHHHhhhhc-----------CcccCCCcccccCCchHHHHHHHHHHHHHHHHhC----CCc
Confidence 3679999999998 45566665553110 1123455332 4443 444322 24444433 456
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCc--EEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGV--EIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
++|++++|+ +++..++.+++++||.|+++.|+|+.+. ..+... |. .++++++++ +++.+|++.+++.+++.
T Consensus 87 ~~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~- 162 (407)
T 2dkj_A 87 ANVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFS-GKLYKVVSYGVRP-DTELIDLEEVRRLALEH- 162 (407)
T ss_dssp EECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHH-HHHSEEEEECCCT-TTSSCCHHHHHHHHHHH-
T ss_pred ceEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhc-CceEEEEecCCCc-ccCccCHHHHHHHHhhc-
Confidence 667777776 5999999999999999999999999884 344444 66 444444332 35789999999998742
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc-cccCCCCCCccchhhhhhccCcCCCCCCCC
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG-TVFDSPSSSFISIMEAVMDRNIDESDDLWS 263 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (464)
++++|++++|+|| ...+ +++|.++|+++|+++|+||+|.. +.+.+. . .+. + . .
T Consensus 163 ----~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~-~~~--~-~-----------~ 216 (407)
T 2dkj_A 163 ----RPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGL--H-PNP--L-P-----------Y 216 (407)
T ss_dssp ----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTC--S-CCC--T-T-----------T
T ss_pred ----CCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCc--c-CCc--c-c-----------c
Confidence 6788999999998 4444 78899999999999999999986 333322 1 111 1 1 2
Q ss_pred cEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCC---CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHH
Q 037587 264 RIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL---VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEM 340 (464)
Q Consensus 264 ~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (464)
.++++.|+||.+ +|+|+||++++++.+.+.+......+. .+.....++.+++.... .+++++.++.+++++++
T Consensus 217 ~di~~~s~sK~l--~g~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~ 292 (407)
T 2dkj_A 217 AHVVTSTTHKTL--RGPRGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEAL--QPEFKEYSRLVVENAKR 292 (407)
T ss_dssp CSEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHH
T ss_pred ccEEEEeccccC--CCCCceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHH
Confidence 467899999954 688999999964556555555443322 23333334445554311 24567788888899999
Q ss_pred HHHHHHhCCCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC----CCCCCCeEEEEeec---
Q 037587 341 LVSGLKVAGIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC----HCNEPGWFRICFAN--- 412 (464)
Q Consensus 341 l~~~l~~~g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f----~~~~~~~~Ris~~~--- 412 (464)
+.+.|++.|+++.. +..++|+|++++... . ...++...| .++||.+++|..| +...++++|++++.
T Consensus 293 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~ 366 (407)
T 2dkj_A 293 LAEELARRGYRIVTGGTDNHLFLVDLRPKG--L---TGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITT 366 (407)
T ss_dssp HHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---CHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHH
T ss_pred HHHHHHhCCceeecCCCCceEEEEECcccC--C---CHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccc
Confidence 99999988988874 345678999987421 0 122455555 6789999998764 22246789999963
Q ss_pred --CCHHHHHHHHHHHHHHHHh
Q 037587 413 --ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 413 --~~~e~l~~~l~~l~~~l~~ 431 (464)
.+++++++++++|++++++
T Consensus 367 ~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 367 RGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TTCCGGGHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhc
Confidence 5899999999999999987
No 108
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.98 E-value=2.2e-31 Score=262.30 Aligned_cols=300 Identities=13% Similarity=0.160 Sum_probs=220.1
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCC-hhhhcccCCCcEEEEE
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPT-PYYPG-FDRDLKWRPGVEIVPI 161 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~-~~~~~~~~~g~~~~~v 161 (464)
.+..++|++++++++ .+.+++++++|+|+++++..++.+++++||.|++.+ ++|+. +...+... |++++.+
T Consensus 37 ~~~~~l~~~la~~~g------~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v 109 (366)
T 1m32_A 37 GVVEQIRQQLTALAT------ASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARMVEMAGLM-GIAHHAY 109 (366)
T ss_dssp TTHHHHHHHHHHHHC------SSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHH-TCCEEEE
T ss_pred HHHHHHHHHHHHHhC------CCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHh-CCceEEE
Confidence 567999999999985 112346899999999999999999999999988776 55543 44555555 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+++. .+.+|+++|++.+++ ..++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+.. ..
T Consensus 110 ~~~~--~~~~d~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~---~~-- 175 (366)
T 1m32_A 110 DCGE--VARPDVQAIDAILNA----DPTISHIAMVHSETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFG---GI-- 175 (366)
T ss_dssp ECCT--TSCCCHHHHHHHHHH----CTTCCEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTT---TS--
T ss_pred eCCC--CCCCCHHHHHHHHhc----CCCeEEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEECCcccc---Cc--
Confidence 9863 466899999999875 225788999999999999998 678888999999999999999732 22
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh----------------c--c--
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM----------------S--S-- 301 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~----------------~--~-- 301 (464)
. .++. ..+.++++.|+||+++ ++.++||++++++ +.+.+... . .
T Consensus 176 ~-~~~~-------------~~~~di~~~s~~K~~~-~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T 1m32_A 176 P-MDIA-------------ALHIDYLISSANKCIQ-GVPGFAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCMEDNHGKW 239 (366)
T ss_dssp C-CCTT-------------TTTCSEEEEESSSTTC-CCSSEEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHHHHTTTCC
T ss_pred C-cccc-------------ccCccEEEecCccccc-CCCceEEEEECHH-HHHhhcCCCCCccccHHHHHhhhcccCCCC
Confidence 1 1111 1145688999999873 2334799999654 33322111 0 0
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHH--HHHHHHHHHHHHHHHHHHHHhCCCeeecC---CccEEEEEecCcccccCChhH
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNY--MKENRKRLRKRKEMLVSGLKVAGIRCLKS---NAGLFCWVDMRHLLVSNTFEA 376 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~---~~g~f~~~~l~~~~~~~~~~~ 376 (464)
.++.+...+.++..+++.. .++ +++.++.++++++++.+.|+++|+++..+ .+++++|+.++.... ..
T Consensus 240 ~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 312 (366)
T 1m32_A 240 RFTSPTHTVLAFAQALKEL---AKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQ----YR 312 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTT----CC
T ss_pred CCCCCHHHHHHHHHHHHHH---HHccCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCC----CC
Confidence 1345667776666666532 233 56678888899999999999888877654 367799999874100 11
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 377 EKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..++...++ ++||.++||..| ..+++||+++. .+++++++++++|++++++
T Consensus 313 ~~~~~~~l~-~~gi~v~~~~~~---~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 313 FSEFYRRLK-EQGFVIYPGKVS---QSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp HHHHHHHHH-HTTEECEECCCS---SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHH-HCCEEEECCcCC---CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 234666665 569999999876 36799999987 4799999999999988754
No 109
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.98 E-value=5.8e-31 Score=262.10 Aligned_cols=304 Identities=15% Similarity=0.127 Sum_probs=220.8
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-------------CCeEEEcCCCCCChhhhcc
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP-------------GDAFLLPTPYYPGFDRDLK 151 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~-------------gd~Vlv~~p~y~~~~~~~~ 151 (464)
+..++++.+++++.+.++ +++++|++|+|+++++..++.++..+ ||.|+++.|+|+.+...+.
T Consensus 66 ~~~~~~~~l~~~la~~~~----~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~ 141 (397)
T 3f9t_A 66 GTKLLEEKAVALLGSLLN----NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGRE 141 (397)
T ss_dssp HHHHHHHHHHHHHHHHTT----CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhC----CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHH
Confidence 446677777777766655 67889999999999999999998776 9999999999999998888
Q ss_pred cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.. |++++.++.++ ++.+|+++|++.+++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|
T Consensus 142 ~~-g~~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 142 MM-DLEYIYAPIKE--DYTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp HH-TCEEEEECBCT--TSSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTT
T ss_pred Hc-CceeEEEeeCC--CCcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccc
Confidence 77 99999999874 5778999999998752 6788999999999999976 777888999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCC-------
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL------- 304 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~------- 304 (464)
..+.+...+ .......+.... +-.. +..+++.|++|.++ +|+|+|+++++++.+.+.+.....+..
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~----~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (397)
T 3f9t_A 211 GGLVIPFLD-DKYKKKGVNYKF----DFSL-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATI 283 (397)
T ss_dssp GGGTGGGCC-GGGCCTTCCCCC----SGGG-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSS
T ss_pred cchhhhhcc-cccccccccccc----cccc-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhhccCCccccCCCcccc
Confidence 865442210 000000000000 0002 44577899999875 788999999877655443322222211
Q ss_pred ------CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHH
Q 037587 305 ------VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 305 ------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
.+...+.++...+. ...+++..+.++++++++.+.|++.|+++..+..+.++|++++. ..
T Consensus 284 ~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~---------~~ 349 (397)
T 3f9t_A 284 LGTRVGFGGACTYAVLRYLG-----REGQRKIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDED---------YK 349 (397)
T ss_dssp CSSCCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTT---------HH
T ss_pred ccccccchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCC---------HH
Confidence 12345555555543 23356667777788899999999988875544444577888763 12
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHH
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~ 430 (464)
++...+. ++||.+++|.. ++++||+++. .+++++++++++|+++++
T Consensus 350 ~~~~~l~-~~gi~v~~~~~-----~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 350 EVCKKLR-DRGIYVSVCNC-----VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp HHHHHHH-HTTCBCEECSS-----SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHH-hCCeEEeccCC-----CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 4666665 56999998863 5799999985 689999999999998764
No 110
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.98 E-value=1.7e-31 Score=268.97 Aligned_cols=340 Identities=15% Similarity=0.148 Sum_probs=237.7
Q ss_pred CCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCC------------CCcHHHHHHHHHHHHH
Q 037587 32 LHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDY------------HGFPDAKKELVKLMAR 99 (464)
Q Consensus 32 ~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------------~g~~~lr~~ia~~~~~ 99 (464)
.....++|.|+.+.+..+++.+.+++.+.. .....|+.+ ....++++.++++++
T Consensus 17 ~~~~~~~iyld~~~~~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~- 82 (423)
T 3lvm_A 17 YRAMKLPIYLDYSATTPVDPRVAEKMMQFM-------------TMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG- 82 (423)
T ss_dssp ---CCSSEECBTTTCCCCCHHHHHHHTTSS-------------STTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ccccCCCEeecCCCcCCCCHHHHHHHHHHH-------------hhcccccCCCccccchhHHHHHHHHHHHHHHHHHcC-
Confidence 344567788888777666677777766542 100122211 123567777777764
Q ss_pred HcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCeEEEcCCCCCChhhhc---ccCCCcEEEEEecCCCCCcccC
Q 037587 100 IRGNKVKFDPNKLVLTAGSTAANETLMFCLAD----PGDAFLLPTPYYPGFDRDL---KWRPGVEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 100 ~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d 172 (464)
+++++|++|+|+++++..++.++.. +||.|+++.|+|+.+...+ ... |++++.++.++ ++.+|
T Consensus 83 -------~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~~--~~~~d 152 (423)
T 3lvm_A 83 -------ADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLERE-GFEVTYLAPQR--NGIID 152 (423)
T ss_dssp -------CCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHT-TCEEEEECCCT--TSCCC
T ss_pred -------CCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHc-CCEEEEeccCC--CCccC
Confidence 6788999999999999999998874 7999999999999876654 444 99999999874 56789
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhc
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMD 252 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~ 252 (464)
+++|++.+.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|+.. .. . .+..
T Consensus 153 ~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~---~~--~-~~~~----- 212 (423)
T 3lvm_A 153 LKELEAAMRD------DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVG---KL--P-IDLS----- 212 (423)
T ss_dssp HHHHHHHCCT------TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT---TS--C-CCTT-----
T ss_pred HHHHHHhcCC------CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcC---CC--C-cChh-----
Confidence 9999998864 7899999999999999998 667888999999999999998742 11 0 1111
Q ss_pred cCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh---------cccCCCChHHHHHHHHHcCCchhh
Q 037587 253 RNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM---------SSFGLVSSQTQYLLSRMLSDKKFT 323 (464)
Q Consensus 253 ~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~---------~~~~~~s~~~q~~~~~~l~~~~~~ 323 (464)
..+..+++.|+||.+|.+| +||++++++.+.. +... ...++.+...+.++..++.. +
T Consensus 213 --------~~~~di~~~s~sK~~g~~g--~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~ 278 (423)
T 3lvm_A 213 --------QLKVDLMSFSGHKIYGPKG--IGALYVRRKPRVR-IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---A 278 (423)
T ss_dssp --------TSCCSEEEEESTTTTSCSS--CEEEEECBTTBCC-CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---H
T ss_pred --------hcCCCEEEechHHhcCCCC--eEEEEEeccccCC-CCccccCCcccccccCCCCCHHHHHHHHHHHHH---H
Confidence 1245688999999988667 8999986543221 2111 11233455666666555542 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCc---cEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNA---GLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
.+++++.++.++++++++.+.|+++ |+.+..+.+ +.++++.++.. ...++...+ .+ |.+.+|..|.
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~l-~~--i~v~~g~~~~ 348 (423)
T 3lvm_A 279 KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYV-------EGESLIMAL-KD--LAVSSGSACT 348 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTS-------CHHHHHHHT-TT--EECBCCCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCC-------CHHHHHHHH-hh--heeccCcccc
Confidence 3446778888999999999999888 888876553 23555555321 122355554 34 9999998765
Q ss_pred CCC-----------------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCcccccc
Q 037587 400 CNE-----------------PGWFRICFAN-ITEETLQVALQRIKVFAQSCNPQMLLL 439 (464)
Q Consensus 400 ~~~-----------------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~~~~~~ 439 (464)
... .+++||+++. .+++++++++++|++++++.+.....+
T Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~~~ 406 (423)
T 3lvm_A 349 SASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLW 406 (423)
T ss_dssp ---CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTSSHHH
T ss_pred CCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhccCccc
Confidence 421 3789999986 688999999999999998887654443
No 111
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.98 E-value=1e-30 Score=262.00 Aligned_cols=298 Identities=12% Similarity=0.098 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNK-LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~-i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
.++++.++++++ .+.++ +++++|+++++..++.+++++||+|+++.|+|.+ +...+... |++++.+++
T Consensus 49 ~~~~~~la~~~~--------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 119 (411)
T 3nnk_A 49 NEVMALYRGVFR--------TENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRC-RAEVHTIEV 119 (411)
T ss_dssp HHHHHHHHHHHT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHhC--------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHc-CCeEEEEec
Confidence 456666666654 45554 7888999999999999999999999999999976 66667666 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+ .++.+|+++|++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+||+++. ... .
T Consensus 120 ~--~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~---~~~--~- 183 (411)
T 3nnk_A 120 P--WGEVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASL---GGN--P- 183 (411)
T ss_dssp C--TTCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTB---TTB--C-
T ss_pred C--CCCCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCccc---CCc--c-
Confidence 5 35678999999999752 7899999999999999987 66788889999999999999873 221 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc-----------------------
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS----------------------- 300 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~----------------------- 300 (464)
.... ..+..+++.|+||.++ ++.++||+++++ .+.+.+....
T Consensus 184 ~~~~-------------~~~~d~~~~s~~K~l~-~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~ 248 (411)
T 3nnk_A 184 LETD-------------VWGLDAVSAGMQKCLG-GPSGTSPITLSA-RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNY 248 (411)
T ss_dssp CCTT-------------TTTCSEEECCSTTTTC-CCSSEEEEEECH-HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCST
T ss_pred cchh-------------ccCCcEEEecCccccC-CCCceEEEEECH-HHHHHHhhcccccccccccccccccCCCCcccc
Confidence 1111 2245688999999853 344689999954 4544444322
Q ss_pred ---------------ccCCCChHHHHHHHHHcCCchhhHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---cEEE
Q 037587 301 ---------------SFGLVSSQTQYLLSRMLSDKKFTCNY-MKENRKRLRKRKEMLVSGLKVAGIRCLKSNA---GLFC 361 (464)
Q Consensus 301 ---------------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~f~ 361 (464)
..++.+...+.++..+++.. .+. +++.++.++++++++.+.|++.|+++..+.+ +.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 325 (411)
T 3nnk_A 249 FDLGMVMDYWGPERLNHHTEATTALFGARECARLI---LQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVL 325 (411)
T ss_dssp TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEE
T ss_pred cchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEE
Confidence 11334556666666655432 223 6777888889999999999998888876543 5688
Q ss_pred EEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 362 WVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 362 ~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
++.++.... ..++...|++++||.+++|.. ....+++||++ +. .+++++++++++|++++++.+..
T Consensus 326 ~~~~~~~~~------~~~l~~~l~~~~gi~v~~g~~--~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 393 (411)
T 3nnk_A 326 GVVIPQGIN------GDQARKLMLEDFGIEIGTSFG--PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKFP 393 (411)
T ss_dssp EEECCTTCC------HHHHHHHHHHHHSEEEEECCG--GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCCC------HHHHHHHHHHhcCeEEeCccC--CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCCC
Confidence 888874322 235777777667999998843 23467999998 64 47999999999999999987653
No 112
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.97 E-value=1.1e-30 Score=264.02 Aligned_cols=363 Identities=11% Similarity=0.044 Sum_probs=219.6
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||++.+ .|++. ++.+.+++.+.. .....|....+..++++++++++.+.++
T Consensus 22 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~la~~~~-- 86 (430)
T 3i4j_A 22 FLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQA-------------ARLPFVHGSQFSSDVLEEYAGRLARFVG-- 86 (430)
T ss_dssp EEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCCCCCTTTCEEHHHHHHHHHHHHHTT--
T ss_pred EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHH-------------HhcccccccccCCHHHHHHHHHHHHhCC--
Confidence 4444455678999987 55653 566666666542 2223344445667788888888877654
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChhhhcccCCCc--------------EEEEEe
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--------DPGDAFLLPTPYYPGFDRDLKWRPGV--------------EIVPIH 162 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~~g~--------------~~~~v~ 162 (464)
.++++|++|+|+++++..++++++ .+++.|++.+|+|+++...+....+. .+..++
T Consensus 87 --~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (430)
T 3i4j_A 87 --LPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLP 164 (430)
T ss_dssp --CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEEC
T ss_pred --CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcC
Confidence 567899999999999999999876 34789999999999877554433122 112222
Q ss_pred cCCC-CCcccCHHHHHHHHHHHhhcC-CceEEEEEeCC-CC-CCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccC
Q 037587 163 CSSS-NGFRITISALENAYQQAQTLN-LKVKGVLITNP-SN-PLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFD 237 (464)
Q Consensus 163 ~~~~-~~~~~d~~~l~~~i~~~~~~~-~~~~~vil~~P-~N-PtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~ 237 (464)
.+.. .....|+++|++.+++. + .+++ +++++| +| ++|. +++.+++++|.++|+++|+++|+||+|.++...
T Consensus 165 ~~~~~~~~~~~~~~le~~l~~~---~~~~~~-~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~ 240 (430)
T 3i4j_A 165 KPDPARNGAEDAEGLRALLERE---GPETVA-AFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRC 240 (430)
T ss_dssp CCCTTSCHHHHHTHHHHHHHHH---CGGGEE-EEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred CCcccchhhHHHHHHHHHHHhc---CCCCEE-EEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 2100 00123568888888642 2 2444 555566 66 8886 668888999999999999999999999985443
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh------cccCCCChHHH
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM------SSFGLVSSQTQ 310 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~------~~~~~~s~~~q 310 (464)
+. . ... ...++ ...+ +.||||+++ +| +|+||+++ ++.+.+.+... ...+..++++|
T Consensus 241 g~--~-~~~-~~~~~--------~~~d---i~t~sK~l~-~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~t~~~~~~~~ 303 (430)
T 3i4j_A 241 GS--P-LAL-SRWSG--------VTPD---IAVLGKGLA-AGYAPLAGLLA-APQVYETVMGGSGAFMHGFTYAGHPVSV 303 (430)
T ss_dssp SS--S-SGG-GGTTT--------CCCS---EEEECGGGT-TTSSCCEEEEE-CHHHHHHHHHTTCBCCCCCTTTTCHHHH
T ss_pred cc--h-hhh-hhhcC--------CCCc---EEEEccccc-CCccccEEEEE-CHHHHHHHhccCCcccccCCCCCCHHHH
Confidence 32 1 111 11101 1122 337999999 69 99999999 55566655542 23345788999
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccccCC---hhHHHHHHHHHHH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVSNT---FEAEKELWKKIIF 386 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~---~~~~~~l~~~ll~ 386 (464)
.++.++|+..+. +++.++.++..+..++.+.+.+.++ ++...++.+. |+++++........ .....+++..++
T Consensus 304 aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 380 (430)
T 3i4j_A 304 AAGLSVLDIVER-EDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGL-LLGVVLGDLATGQAFETPGIASRIGAAAL- 380 (430)
T ss_dssp HHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETT-EEEEEEC------------CHHHHHHHHH-
T ss_pred HHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEE-EEEEEeccccccCCCccHHHHHHHHHHHH-
Confidence 988888864221 2224444444444444555555444 4555666665 78888753211000 011235667766
Q ss_pred hcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 387 EVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 387 ~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++||.++|+..+. ....+++||+++. .+++++++++++|++++++.
T Consensus 381 ~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 381 KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp HTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6799999984322 2236789999874 68999999999999998753
No 113
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=7.8e-31 Score=262.69 Aligned_cols=332 Identities=12% Similarity=0.098 Sum_probs=232.8
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCC----CCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQ----DYHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
+.+.|+.+.+..+++.+.+++.+..... . ......|+ ...+..+++++++++++ +++++|
T Consensus 26 ~~~~ld~~~~~~~~~~v~~a~~~~~~~~-----~---~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v 89 (406)
T 3cai_A 26 GWVHFDAPAGMLIPDSVATTVSTAFRRS-----G---ASTVGAHPSARRSAAVLDAAREAVADLVN--------ADPGGV 89 (406)
T ss_dssp SCEECBGGGCCCCCHHHHHHHHHHHHHC-----C---SSSCSSSHHHHHHHHHHHHHHHHHHHHHT--------CCGGGE
T ss_pred CeEEEeCCCcCCCCHHHHHHHHHHHHhc-----C---CCCCCccHHHHHHHHHHHHHHHHHHHHhC--------CCCCeE
Confidence 4688888887766666766666542110 0 00001232 12345788888888885 567899
Q ss_pred EEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChhhhccc----CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 113 VLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFDRDLKW----RPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
++|+|+++++..++.++ +++||.|+++.|+|+.+...+.. . |++++.+++++ .++.+|++.|++.+++
T Consensus 90 ~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~v~~v~~~~-~~~~~d~~~l~~~l~~--- 164 (406)
T 3cai_A 90 VLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRY-GAKVKWAEVDI-ETGELPTWQWESLISK--- 164 (406)
T ss_dssp EEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHH-BCEEEEECCCT-TTCCCCGGGHHHHCCT---
T ss_pred EEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhc-CCeEEEEecCc-ccCCcCHHHHHHHhCC---
Confidence 99999999999999987 78999999999999876555433 4 89999999873 2457899999988754
Q ss_pred cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 186 LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 186 ~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+. +.. . .++..+ +.+
T Consensus 165 ---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---g~~--~-~~~~~~-------------~~d 219 (406)
T 3cai_A 165 ---STRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAA---PYR--L-LDIRET-------------DAD 219 (406)
T ss_dssp ---TEEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTT---TTC--C-CCHHHH-------------CCS
T ss_pred ---CceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEccccc---CCC--C-CCchhc-------------CCC
Confidence 7899999999999999987 56788889999999999999973 221 1 122222 456
Q ss_pred EEEcCCCcCCCCCccEEE-EEEecCHHHHHHHHHhcc-----------cCCCChHHHHHHHHHcCCchh-----------
Q 037587 266 HIVYSLSKDFSMPGFRVG-MIYSNNERVVSAATKMSS-----------FGLVSSQTQYLLSRMLSDKKF----------- 322 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG-~l~~~~~~~~~~~~~~~~-----------~~~~s~~~q~~~~~~l~~~~~----------- 322 (464)
+++.|+||.+| ++ +| |+++++ .+.+.+..... .++.+...+.++..+++....
T Consensus 220 ~~~~s~~K~~g-~~--~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 295 (406)
T 3cai_A 220 VVTVNAHAWGG-PP--IGAMVFRDP-SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRE 295 (406)
T ss_dssp EEEEEGGGGTS-CS--CEEEEESCH-HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHH
T ss_pred EEEeehhhhcC-CC--cCeEEEEeh-HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhh
Confidence 78999999887 55 89 999854 44433332211 233455555444444431110
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCC---ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC-
Q 037587 323 -TCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSN---AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS- 396 (464)
Q Consensus 323 -~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~---~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~- 396 (464)
+.+++++.++.++++++++.+.|+++ |+++..+. ++ ++++.++. . ...++...| .++||.+++|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~-~------~~~~~~~~L-~~~gi~v~~g~~ 366 (406)
T 3cai_A 296 RLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIP-VVSFAVHK-V------PADRVVQRL-ADNGILAIANTG 366 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCS-EEEEEETT-B------CHHHHHHHH-HHTTEECEECCS
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCC-EEEEEECC-c------CHHHHHHHH-HHCCcEEecCCh
Confidence 02256778888889999999999987 77776653 55 68888763 1 122466666 46799999987
Q ss_pred -----CCCCC-CCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 397 -----SCHCN-EPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 397 -----~f~~~-~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
.|+.. ..+++||+++. .+++++++++++|++
T Consensus 367 ~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 367 SRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp CHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 33321 25789999986 579999999999875
No 114
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.97 E-value=2.5e-30 Score=257.48 Aligned_cols=299 Identities=16% Similarity=0.165 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPN-KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
.+++++++++++ .+.+ +|++|+|+++++..++.+++++||+|+++.++|.+ +...+... |++++.+++
T Consensus 59 ~~l~~~la~~~~--------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 129 (393)
T 3kgw_A 59 EEIKQGIQYVFQ--------TRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMRAAEIADRI-GARVHQMIK 129 (393)
T ss_dssp HHHHHHHHHHHT--------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHhC--------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHc-CCceEEEeC
Confidence 466666666664 3343 69999999999999999999999999999988742 24445555 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+. ++.+|+++|++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.. .
T Consensus 130 ~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~---~g~~--~- 193 (393)
T 3kgw_A 130 KP--GEHYTLQEVEEGLAQH-----KPVLLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVAS---LGGV--P- 193 (393)
T ss_dssp CT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT---TTTS--C-
T ss_pred CC--CCCCCHHHHHHHHhhC-----CCcEEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCcc---ccCc--c-
Confidence 64 3468999999999753 6889999999999999988 6678888999999999999987 2222 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc----------------------
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS---------------------- 301 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~---------------------- 301 (464)
.... ..+..+++.|+||+++ ++.++||+++++ .+.+.+.....
T Consensus 194 ~~~~-------------~~~~d~~~~s~sK~~~-~~~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (393)
T 3kgw_A 194 IYMD-------------QQGIDIMYSSSQKVLN-APPGISLISFND-KAKYKVYSRKTKPVSFYTDITYLAKLWGCEGET 258 (393)
T ss_dssp CCTT-------------TTTCCEEEEESSSTTC-CCSSCEEEEECH-HHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSC
T ss_pred cchh-------------hcCCCEEEecCccccc-CCCceeEEEECH-HHHHHHhccCCCCCceeecHHHHHHhhhhcccc
Confidence 1111 1245678899999774 333489999954 44444443211
Q ss_pred ---cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccEEEEEecCcccccCCh
Q 037587 302 ---FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGLFCWVDMRHLLVSNTF 374 (464)
Q Consensus 302 ---~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~f~~~~l~~~~~~~~~ 374 (464)
.++.+...+.++..+++... ...+++.++.++++++++.+.|+++|+++..+. .++++|+.++....
T Consensus 259 ~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 332 (393)
T 3kgw_A 259 RVIHHTTPVTSLYCLRESLALIA--EQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYN---- 332 (393)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBC----
T ss_pred CCCCCCCCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCC----
Confidence 12345666666666654321 233677788889999999999999888876433 35677888874322
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHhhCcc
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
..++...+++++||.+++|..+. ..+++||++ +. .+++++++++++|++++++.+.+
T Consensus 333 --~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 333 --WRDIVSYVLDHFSIEISGGLGPT--EERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp --HHHHHHHHHHHHCEECBCCCGGG--TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred --HHHHHHHHHHhCCEEEeCCcccC--CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 23577777766699999987543 467999998 65 48999999999999999887643
No 115
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.97 E-value=9.1e-30 Score=259.09 Aligned_cols=345 Identities=15% Similarity=0.151 Sum_probs=230.4
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
..+|+..+.++.+ .+.+.+++.. ....|.+..+..+||++|+++++ .+++++|
T Consensus 43 ~ylD~~~~~~~~~~~~~~~~a~~~----------------~~~~y~~~~~~~~l~~~la~~~~----------~~~~~~~ 96 (456)
T 2ez2_A 43 IYIDLLTDSGTNAMSDKQWAGMMM----------------GDEAYAGSENFYHLERTVQELFG----------FKHIVPT 96 (456)
T ss_dssp CSEECSCSSSCCCCCHHHHHHHTT----------------CCCCSSSCHHHHHHHHHHHHHHC----------CSEEEEE
T ss_pred ceeeeccccCCccCCHHHHHHhhc----------------chhhcccChhHHHHHHHHHHHhC----------CCcEEEe
Confidence 3578888776654 3434443321 12357666678899999999985 2479999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCC-CChhhhcccCCCcEEEEEecCCC----C----CcccCHHHHHHHHHHHhhc
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYY-PGFDRDLKWRPGVEIVPIHCSSS----N----GFRITISALENAYQQAQTL 186 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~~g~~~~~v~~~~~----~----~~~~d~~~l~~~i~~~~~~ 186 (464)
+|+++++..++.+++++|| +++.|+| +.+...+... |++++.++++++ . +|.+|+++|++++++..
T Consensus 97 ~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~-G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t-- 171 (456)
T 2ez2_A 97 HQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKN-GAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKG-- 171 (456)
T ss_dssp SSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHT-TCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHC--
T ss_pred CCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHc-CCEEEEecccccccccccccccCCCCHHHHHHHHHhcc--
Confidence 9999999999999999999 7889999 6666667666 999999988631 2 36889999999997521
Q ss_pred CCceEEEEEeCCCC-CCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc----------cccCCCCCCccchhhhhhccCc
Q 037587 187 NLKVKGVLITNPSN-PLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG----------TVFDSPSSSFISIMEAVMDRNI 255 (464)
Q Consensus 187 ~~~~~~vil~~P~N-PtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~----------~~~~~~~~~~~~~~~l~~~~~~ 255 (464)
..++++|++++|+| |||.+++.+++++|+++|+++|+++|+||+|.. ..+.+. .+.++......
T Consensus 172 ~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~--~~~~~~~~~~~--- 246 (456)
T 2ez2_A 172 AENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENK--SIAEIVHEMFS--- 246 (456)
T ss_dssp GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTS--CHHHHHHHHHT---
T ss_pred ccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCc--chhhhhhhhcc---
Confidence 12358999999998 999999999999999999999999999999985 223322 21111101111
Q ss_pred CCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc-------CCCChHHHHH-HHHHcCCchhhHHHH
Q 037587 256 DESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF-------GLVSSQTQYL-LSRMLSDKKFTCNYM 327 (464)
Q Consensus 256 ~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~-------~~~s~~~q~~-~~~~l~~~~~~~~~~ 327 (464)
..+++++ |++|.++ +| |+||++++++.+.+.+...... ...+.....+ +..+++ .+.
T Consensus 247 ------~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~---~~~--- 311 (456)
T 2ez2_A 247 ------YADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE---AMQ--- 311 (456)
T ss_dssp ------TCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH---HTC---
T ss_pred ------cCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH---HhH---
Confidence 1345545 7888765 77 7899998556565544433221 1223222222 222221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCc---ccccCChhHHHHHHHHHHHhcCeEEeC-CCCCC----
Q 037587 328 KENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRH---LLVSNTFEAEKELWKKIIFEVGLNISP-GSSCH---- 399 (464)
Q Consensus 328 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~---~~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f~---- 399 (464)
+...++..+..+++.+.|.+.|+++..+.+++|+|+++.. ......+ ....++..|++++||.+.+ |..|.
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~g~~~~~~~~ 390 (456)
T 2ez2_A 312 YEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEF-PAQSLAASIYVETGVRSMERGIISAGRNN 390 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGC-HHHHHHHHHHHHHSEECEEESHHHHCBCT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhc-cHHHHHHHHHHhcCeeeecccccccccCc
Confidence 1222223344566777777778888777788899998752 1111111 0223466665778999766 43221
Q ss_pred ------CCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhC
Q 037587 400 ------CNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 400 ------~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~ 433 (464)
....+++||+++. .+++++++++++|++++++.+
T Consensus 391 ~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 391 VTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp TTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred cccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 1124789999985 489999999999999998755
No 116
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.97 E-value=4.4e-30 Score=252.31 Aligned_cols=335 Identities=12% Similarity=0.139 Sum_probs=223.0
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
+++|||+.+.+..+++.+.+++.+.. ......|++.....++++.+++++ + .+++|++|
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~l~~~la~~~----g-----~~~~v~~~ 65 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHS------------SGQAGPYGTDELTAQVKRKFCEIF----E-----RDVEVFLV 65 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTT------------SSCCCSTTCSHHHHHHHHHHHHHH----T-----SCCEEEEE
T ss_pred CceEeeccCCccCCCHHHHHHHHhhc------------cCcccccccchHHHHHHHHHHHHh----C-----CCCcEEEe
Confidence 46789998755555677777766531 011233433222344555555554 3 24569999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh--cccCC-CcEEEEEecCCCCCcccCHHHHHH-HHHHHh-hcCCce
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD--LKWRP-GVEIVPIHCSSSNGFRITISALEN-AYQQAQ-TLNLKV 190 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~--~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~-~i~~~~-~~~~~~ 190 (464)
+|+++++..++.+++++||.|+++.|+|..+... +.... |++++.++.+ ++.+|+++|++ .+++.. ..++++
T Consensus 66 ~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 66 PTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp SCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred CCccHHHHHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCc
Confidence 9999999999999999999999999998765544 44333 8888888864 46789999998 775210 112368
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEE
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIV 268 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l 268 (464)
++|++++||| ||.++|.+++++|+++|+++|+++|+|++|..+.+ .+. . .....+.. . .. +++
T Consensus 143 ~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~-~~~~~~~~---------~-~d-~~~ 207 (356)
T 1v72_A 143 ACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC--S-PAEMTWKA---------G-VD-ALS 207 (356)
T ss_dssp EEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC--C-TTTTTGGG---------T-CC-EEE
T ss_pred eEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC--C-HHHhhhhh---------c-CC-EEE
Confidence 9999999987 99999999999999999999999999999975321 121 1 11111101 1 12 335
Q ss_pred cCCCcCCCCCccEEEEEEecCHHHHHHHHHhccc-CC---CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 037587 269 YSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSF-GL---VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSG 344 (464)
Q Consensus 269 ~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~-~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 344 (464)
.|+||. |. .+..||++++++ +.+.+...... .. .+...+..+...+.+..+ .+..+.++++++++.+.
T Consensus 208 ~s~sK~-g~-~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~l~~~ 279 (356)
T 1v72_A 208 FGATKN-GV-LAAEAIVLFNTS-LATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLW-----LRNARKANAAAQRLAQG 279 (356)
T ss_dssp ECCGGG-TC-SSCEEEEESSGG-GHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHH-----HHHHHHHHHHHHHHHHH
T ss_pred EecccC-CC-cCccEEEEECHH-HHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHH
Confidence 599998 43 233458887544 44433332211 11 122334444555655322 23455567778889999
Q ss_pred HHhC-CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHH
Q 037587 345 LKVA-GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVAL 422 (464)
Q Consensus 345 l~~~-g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l 422 (464)
|+++ |+++..+.+++|+|++++. +++..|. ++||.++||. |+ ++++||+++. .+++++++++
T Consensus 280 L~~~~g~~~~~~~~~~~~~~~~~~-----------~~~~~l~-~~gi~v~~g~-~~---~~~iRi~~~~~~~~~~i~~~~ 343 (356)
T 1v72_A 280 LEGLGGVEVLGGTEANILFCRLDS-----------AMIDALL-KAGFGFYHDR-WG---PNVVRFVTSFATTAEDVDHLL 343 (356)
T ss_dssp HTTCTTEEEESCCCSSEEEEEECH-----------HHHHHHH-HTTCBCBCSS-SS---TTEEEEECCTTCCHHHHHHHH
T ss_pred HhhCCCcEEccCCCccEEEEEcCH-----------HHHHHHH-hcCeEEeccc-cC---CCeEEEEecCCCCHHHHHHHH
Confidence 9885 8887666677799998862 3666664 6799999987 54 6799999875 5899999999
Q ss_pred HHHHHHHHhhC
Q 037587 423 QRIKVFAQSCN 433 (464)
Q Consensus 423 ~~l~~~l~~~~ 433 (464)
++|++++++.+
T Consensus 344 ~~l~~~l~~~~ 354 (356)
T 1v72_A 344 NQVRLAADRTQ 354 (356)
T ss_dssp HHHHHTC----
T ss_pred HHHHHHHHhhc
Confidence 99999876543
No 117
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.97 E-value=4.2e-30 Score=258.77 Aligned_cols=337 Identities=13% Similarity=0.073 Sum_probs=222.7
Q ss_pred CCCCceEEeeccc--ccc--c-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--S-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
.....+||++.+. |++ + ++.+.+++.+... ....|....+..+++..+++.+.+.++ +
T Consensus 39 ~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~la~~~~----~ 101 (419)
T 2eo5_A 39 VDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQ-------------KLAHAAANDFYNIPQLELAKKLVTYSP----G 101 (419)
T ss_dssp TTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHT-------------TSCCCSCSCSCCHHHHHHHHHHHHHSS----C
T ss_pred CCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHh-------------hCccccccccCCHHHHHHHHHHHHhCC----C
Confidence 3455689998887 455 2 4667776665421 111232222334455555555555544 4
Q ss_pred C-CCcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCCCCCChhhhcccC-------------CCcEEEEEecCCCCCcc--
Q 037587 108 D-PNKLVLTAGSTAANETLMFCLAD-PGDAFLLPTPYYPGFDRDLKWR-------------PGVEIVPIHCSSSNGFR-- 170 (464)
Q Consensus 108 ~-~~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~-------------~g~~~~~v~~~~~~~~~-- 170 (464)
+ +++|++|+|+++++..+++++.. +||.|++.+|+|+++....... .+..++.++.+. .|.
T Consensus 102 ~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~ 179 (419)
T 2eo5_A 102 NFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNP 179 (419)
T ss_dssp SSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCT
T ss_pred CcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--ccccc
Confidence 4 78999999999999999987643 4899999999998654321100 023566676642 222
Q ss_pred --------------cCHHHHH-HHHHHHhhcC-CceEEEEEeCCC-CCCCC-CCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 171 --------------ITISALE-NAYQQAQTLN-LKVKGVLITNPS-NPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 171 --------------~d~~~l~-~~i~~~~~~~-~~~~~vil~~P~-NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
+|+++|+ +.+++. .+ .+++ +++++|+ ||||. +.+.+++++|.++|+++|+++|+||+|.
T Consensus 180 ~g~~~~~~~~~~~~~~~~~l~~~~i~~~--~~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~ 256 (419)
T 2eo5_A 180 WHINGYENPSELVNRVIEFIEDYIFVNL--VPPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM 256 (419)
T ss_dssp TCCCTTTCHHHHHHHHHHHHHHTHHHHT--CCGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ccccccccchhhHHHHHHHHHHHHHhhc--cCCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 3578888 877631 01 2454 5667785 67896 6688889999999999999999999999
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHH-HhcccCCCChHHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAAT-KMSSFGLVSSQTQ 310 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~-~~~~~~~~s~~~q 310 (464)
++.+.+. . .. ..... ...+++ ||||.|| +| +|+||++++++.+ . +. .....++.++++|
T Consensus 257 ~~g~~g~--~-~~-~~~~~---------~~~d~~---t~sK~~~-~G~~riG~~~~~~~~~-~-~~~~~~~t~~~n~~~~ 317 (419)
T 2eo5_A 257 GLGRTGK--L-FA-IENFN---------TVPDVI---TLAKALG-GGIMPIGATIFRKDLD-F-KPGMHSNTFGGNALAC 317 (419)
T ss_dssp TTTTTSS--S-SG-GGGGT---------CCCSEE---EECGGGG-TTTSCCEEEEEEGGGC-C-C------CCCCCHHHH
T ss_pred CCccCcc--h-hh-HHhcC---------CCCCEE---Eeccccc-CCccceEEEEEchHhh-c-CCcccCCCCCCCHHHH
Confidence 7544332 1 11 11211 113333 8999999 69 9999999966543 2 32 2233345788999
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCe
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI 390 (464)
.++.++++.. . +.++.++++++++.+.|+++ +...++.+ .|+|+++.... .... ++..++ ++||
T Consensus 318 ~aa~aal~~~---~----~~~~~~~~~~~~l~~~L~~~-~~~~~~~g-~~~~i~~~~~~-----~~~~-~~~~l~-~~Gv 381 (419)
T 2eo5_A 318 AIGSKVIDIV---K----DLLPHVNEIGKIFAEELQGL-ADDVRGIG-LAWGLEYNEKK-----VRDR-IIGESF-KRGL 381 (419)
T ss_dssp HHHHHHHHHH---H----HHHHHHHHHHHHHHHHHTTS-SSEEEEET-TEEEEECSCHH-----HHHH-HHHHHH-HTTE
T ss_pred HHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHh-hhheEeee-EEEEEEEecCc-----cHHH-HHHHHH-HCCC
Confidence 9988888632 2 26677788889999999876 44445555 47888884210 1123 666665 7899
Q ss_pred EEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 391 NISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 391 ~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.++|+. .+++||+++. .+++++++++++|++++++.
T Consensus 382 ~v~~~~------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 382 LLLPAG------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp ECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 999863 5689998764 68999999999999998753
No 118
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.97 E-value=1.1e-29 Score=255.10 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=220.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLV-LTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~-it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~~g~~~~~v~~ 163 (464)
.++++.++++++ +++++++ +++|+++++..++.+++++||.|++++|+|.+ +...+... |++++.+++
T Consensus 47 ~~l~~~la~~~g--------~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~-g~~~~~v~~ 117 (416)
T 3isl_A 47 NETMEMLRELFQ--------TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERY-GANVHMLEC 117 (416)
T ss_dssp HHHHHHHHHHTT--------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred HHHHHHHHHHhC--------CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhc-CCeeEEEec
Confidence 455555665554 5666665 88999999999999999999999999999986 55566666 999999998
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+. ++.+|++++++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. ... .
T Consensus 118 ~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~---~~~--~- 181 (416)
T 3isl_A 118 EW--GTVFDPEDIIREIKKV-----KPKIVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATI---GGC--E- 181 (416)
T ss_dssp CT--TCCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTT---TTS--C-
T ss_pred CC--CCCCCHHHHHHHHhhC-----CCcEEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccc---cCC--C-
Confidence 74 4578999999999742 7899999999999999988 67788899999999999999873 221 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc-----------------------
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS----------------------- 300 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~----------------------- 300 (464)
.+.. ..+..+++.|+||.++ ++.++|+++++++ +.+.+....
T Consensus 182 ~~~~-------------~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~-~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~ 246 (416)
T 3isl_A 182 VKVD-------------EWKIDAAIGGTQKCLS-VPSGMAPITYNER-VADVIAARKKVERGIATQADRAALSGNRPITS 246 (416)
T ss_dssp CCTT-------------TTTCSEEECCSSSTTC-CCSSEEEEEECHH-HHHHHHTC------------------CCCCSC
T ss_pred cchh-------------hcCCCEEEecCccccC-CCCCeEEEEECHH-HHHHhhccccccccccccccchhccCCCCCCc
Confidence 1111 1245688999999753 3445899998544 444443210
Q ss_pred -----------------ccCCCChHHHHHHHHHcCCchhhHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCc---cE
Q 037587 301 -----------------SFGLVSSQTQYLLSRMLSDKKFTCNY-MKENRKRLRKRKEMLVSGLKVAGIRCLKSNA---GL 359 (464)
Q Consensus 301 -----------------~~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~ 359 (464)
..++.+...+.++.++++.. .++ +++.++.++++++++.+.|++.|+++..+.+ +.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 323 (416)
T 3isl_A 247 NYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLV---LEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPV 323 (416)
T ss_dssp STTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTT
T ss_pred cccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCc
Confidence 12244566666666665432 333 6778888899999999999998888876653 56
Q ss_pred EEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHH-HHHHHHHHHHHHHhhCcc
Q 037587 360 FCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEET-LQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 360 f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~-l~~~l~~l~~~l~~~~~~ 435 (464)
++++.++.... ..++...|++++||.+++|... ..++++||++.. .++++ +++++++|++++++....
T Consensus 324 ~~~~~~~~~~~------~~~l~~~L~~~~gi~v~~g~~~--~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~~ 393 (416)
T 3isl_A 324 VTCVEIPGGID------GESVRDMLLAQFGIEIASSFGP--LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNAG 393 (416)
T ss_dssp EEEEECCTTCC------HHHHHHHHHHHHCEECBCCCST--TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCCCCC------HHHHHHHHHHhCCEEEecCCCC--CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCCC
Confidence 88888864322 2357777776669999998742 346799999943 45556 999999999999987643
No 119
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.97 E-value=4.1e-31 Score=261.84 Aligned_cols=324 Identities=16% Similarity=0.127 Sum_probs=225.0
Q ss_pred CCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.....+|||+.+.+ ++ +++.+.+++.+.... .+ .....|+ ..+..+++++++++++ +
T Consensus 25 ~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~-----~~----~~~~~y~-~~~~~~l~~~la~~~g--------~- 85 (375)
T 2eh6_A 25 EEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEK-----LL----HVSNLYE-NPWQEELAHKLVKHFW--------T- 85 (375)
T ss_dssp TTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHH-----CS----CCCTTBC-CHHHHHHHHHHHHTSS--------S-
T ss_pred CCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHh-----cc----ccCcccC-CHHHHHHHHHHHhhcC--------C-
Confidence 34557899998763 44 456666666654211 00 1123564 3467889999998864 4
Q ss_pred CCcEEEeCChHHHHHHHHHH---hc---CCC-CeEEEcCCCCCChhhhcccCCCc-------E-----EEEEecCCCCCc
Q 037587 109 PNKLVLTAGSTAANETLMFC---LA---DPG-DAFLLPTPYYPGFDRDLKWRPGV-------E-----IVPIHCSSSNGF 169 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~---l~---~~g-d~Vlv~~p~y~~~~~~~~~~~g~-------~-----~~~v~~~~~~~~ 169 (464)
+++|++|+|+++++..++.+ +. ++| |+|++++|+|+.+...+....+. . +..++.
T Consensus 86 ~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 159 (375)
T 2eh6_A 86 EGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL------ 159 (375)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT------
T ss_pred CCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC------
Confidence 48999999999999999875 45 788 99999999998876544332121 1 333331
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
.|+++|++.+++ ++++|++++|+||||.+ .+.+++++|.++|+++|+++|+||+|.++.+.+. . .++..
T Consensus 160 -~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~-~~~~~ 229 (375)
T 2eh6_A 160 -NDIDSVYKLLDE------ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE--F-YAYQH 229 (375)
T ss_dssp -TCHHHHHTTCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-SGGGG
T ss_pred -chHHHHHHHhcC------CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc--c-hhhhh
Confidence 478888887653 78999999999999998 4688899999999999999999999997433222 1 12211
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHH
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNY 326 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 326 (464)
+ . ...+++ ||||.++ +|+|+||+++++ .+.+.+.. ....+.++++.|.++.++++..
T Consensus 230 ~-~---------~~~d~~---s~SK~~~-~g~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------ 288 (375)
T 2eh6_A 230 F-N---------LKPDVI---ALAKGLG-GGVPIGAILARE-EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV------ 288 (375)
T ss_dssp G-T---------CCCSEE---EECGGGG-TTSCCEEEEEEH-HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH------
T ss_pred c-C---------CCCCEE---EEccccc-CCCCeEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH------
Confidence 1 1 112333 8999999 799999999954 44443333 2222346778888777766532
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 037587 327 MKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWF 406 (464)
Q Consensus 327 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 406 (464)
.+.++.++++++++.+.|++++....++. |+|+|++++.. ..+++..++ ++||.+.|+. ++++
T Consensus 289 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-g~~~~~~~~~~--------~~~~~~~l~-~~gi~~~~~~------~~~i 351 (375)
T 2eh6_A 289 -EKLLPHVREVGNYFKEKLKELGKGKVKGR-GLMLGLELERE--------CKDYVLKAL-EKGLLINCTA------GKVL 351 (375)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTSSEEEEE-TTEEEEECSSC--------CHHHHHHHH-HTTEECEEET------TTEE
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCceEE-EEEEEEEEcCc--------HHHHHHHHH-HCCCEEecCC------CCEE
Confidence 15566777788889999988765444444 46899998741 124666665 5799999862 5789
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHH
Q 037587 407 RICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 407 Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
||+++. .+++++++++++|++++
T Consensus 352 Ri~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 352 RFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEECCCCCCHHHHHHHHHHHHHhC
Confidence 999874 68999999999998753
No 120
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.97 E-value=1.2e-30 Score=255.85 Aligned_cols=295 Identities=13% Similarity=0.055 Sum_probs=215.6
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEe
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIH 162 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~ 162 (464)
+..++|++++++++ .+.++++|++|+|+++++..++.++++ |+|++++|+|+.+ ...+... |++++.++
T Consensus 34 ~~~~l~~~la~~~g------~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~-g~~~~~v~ 104 (353)
T 2yrr_A 34 VNRAIQERLAALFD------PGEGALVAALAGSGSLGMEAGLANLDR--GPVLVLVNGAFSQRVAEMAALH-GLDPEVLD 104 (353)
T ss_dssp HHHHHHHHHHHHHC------CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEEEECSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHHHHhC------CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEEEcCCCchHHHHHHHHHc-CCceEEEe
Confidence 45788888888875 223478899999999999999999876 8999999998764 3334555 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+++ ++.+|++.+++.+++. ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|. ++.. .
T Consensus 105 ~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~---~~~~--~ 169 (353)
T 2yrr_A 105 FPP--GEPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTT---LGML--P 169 (353)
T ss_dssp CCT--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTT---TTTS--C
T ss_pred CCC--CCCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCcc---cccc--c
Confidence 864 4678999999988641 6788999999999999988 5678888999999999999996 3322 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHH-----------------HhcccCC
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAAT-----------------KMSSFGL 304 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~-----------------~~~~~~~ 304 (464)
.++..+ +..+++.|++|++ |.+| +||++++++.+ +.++ .....++
T Consensus 170 -~~~~~~-------------~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 2yrr_A 170 -FSMRAM-------------GVDYAFTGSQKCLSAPPG--LAPIAASLEAR-KAFTGKRGWYLDLARVAEHWERGGYHHT 232 (353)
T ss_dssp -CCHHHH-------------TCSEEECCTTSTTCCCSS--CEEEEECHHHH-HHCCCCSCSTTCHHHHHHHHTTCCCSSC
T ss_pred -cccccc-------------CceEEEecCcccccCCCc--eEEEEECHHHH-HHhccCCCccccHHHHhhhhhcCCCCCC
Confidence 222222 3346788999965 5566 69999965433 3222 1112234
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC--ccEEEEEecCcccccCChhHHHHHHH
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN--AGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
.+...+.++..+++... ...+++.++.++++++++.+.|++.|+++.++. +++++|++++.... ..++..
T Consensus 233 ~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 304 (353)
T 2yrr_A 233 TPVLLHYALLEALDLVL--EEGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVD------ADRLVR 304 (353)
T ss_dssp CCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCC------HHHHHH
T ss_pred CCHHHHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCC------HHHHHH
Confidence 56666666666654321 122667788888899999999988888877654 66677888863221 224666
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHH-HHHHHHHHHHHh
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQ-VALQRIKVFAQS 431 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~-~~l~~l~~~l~~ 431 (464)
.+. ++||.+++|..|. .++++||++.. .++++++ +++++|+++++.
T Consensus 305 ~l~-~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 305 ALY-AEGVAVAGGIGPT--RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp HHH-HTTEECEECCGGG--TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred HHH-HCCEEEeCCcccc--CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 665 5699999998664 36789999943 6788898 999999998764
No 121
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=3.8e-30 Score=256.64 Aligned_cols=328 Identities=16% Similarity=0.124 Sum_probs=223.1
Q ss_pred CCCCCCCCceEEeeccccccc----HHHHHHHHHhhhhhHHhhhccccccccc-ccCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLAENQLS----FDLLESWLASNQEAVELKRNGESLFREL-ALFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.....+||++.+.++.+ ++.+.+++.+.... .... ..|+. .-..++++.++++++
T Consensus 29 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~----------~~~~~~~~~~-~~~~~l~~~la~~~g----- 92 (392)
T 3ruy_A 29 WVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANR----------VTLTSRAFHS-DQLGPWYEKVAKLTN----- 92 (392)
T ss_dssp EEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTT----------CSCCCTTSEE-TTHHHHHHHHHHHHT-----
T ss_pred EEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHh----------ccccccccCC-HHHHHHHHHHHHhcC-----
Confidence 333344567899998765533 46666666654211 0110 11221 234566666666652
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCC----------CCeEEEcCCCCCChhhhcccCCCc------------EEEEE
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLADP----------GDAFLLPTPYYPGFDRDLKWRPGV------------EIVPI 161 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~~----------gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v 161 (464)
++++++|+|+++++..++.++..+ +|.|+++.|+|+++...+....+. .+..+
T Consensus 93 -----~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (392)
T 3ruy_A 93 -----KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI 167 (392)
T ss_dssp -----CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE
T ss_pred -----CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee
Confidence 679999999999999999987644 689999999997665443222111 23344
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHH-HHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQE-LNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~-l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+. .|+++|++.++. ++++|++++|+||||.+++.++ +++|.++|+++|+++|+||+|.++.+.+.
T Consensus 168 ~~-------~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~- 233 (392)
T 3ruy_A 168 PY-------GDLEALKAAITP------NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK- 233 (392)
T ss_dssp CT-------TCHHHHHHHCCT------TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS-
T ss_pred Cc-------ccHHHHHHHhcc------CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc-
Confidence 32 178999988753 8999999999999999996666 99999999999999999999987544333
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l 317 (464)
.+ .. .... ...+++ ||||.++ +| +|+||+++++ .+.+.+.... ..++.+++.+.++.+++
T Consensus 234 -~~-~~-~~~~---------~~~d~~---~~SK~l~-gG~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 296 (392)
T 3ruy_A 234 -VF-AC-DWDN---------VTPDMY---ILGKALG-GGVFPISCAAANR-DILGVFEPGSHGSTFGGNPLACAVSIAAL 296 (392)
T ss_dssp -SS-GG-GGGT---------CCCSEE---EECGGGG-TTTSCCEEEEECH-HHHTTCCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred -ch-hh-hccC---------CCCCEE---EEchhhh-CChhhhEEEEECH-HHHhhhccCCcCCCCCCCHHHHHHHHHHH
Confidence 11 11 1111 112333 7899886 57 9999999954 4444333222 23457888888888887
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG---IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP 394 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g---~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p 394 (464)
+... . ++.++.++++++++.+.|++++ +...++.++ |+++.++. . ..++...++ ++||.++|
T Consensus 297 ~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~-~~~~~~~~--~------~~~l~~~l~-~~gi~v~~ 361 (392)
T 3ruy_A 297 EVLE---E--EKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGL-FIGIELNE--P------ARPYCEQLK-AAGLLCKE 361 (392)
T ss_dssp HHHH---H--TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETT-EEEEEESS--C------SHHHHHHHH-TTTEECCC
T ss_pred HHHH---h--hhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeee-EEEEEEcc--h------HHHHHHHHH-HCCcEEec
Confidence 6432 1 4567778888899999998875 444555666 56666764 1 124666665 78999998
Q ss_pred CCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 395 GSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 395 g~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
|. ++++||+++. .+++++++++++|++++
T Consensus 362 ~~------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 362 TH------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp BT------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CC------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 74 5789999765 68999999999999876
No 122
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.97 E-value=2.4e-29 Score=249.37 Aligned_cols=299 Identities=13% Similarity=0.048 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHcCCCCCC-CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKF-DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~-~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~ 163 (464)
.+.+.+++.+.+.+| + +++++++++|+++++..++.++ +||+|+++.|+|+++.. .+... |++++.+ .
T Consensus 58 ~~~~~~~~~~a~~~g----~~~~~~~~~~~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~-g~~~~~v-~ 129 (374)
T 2aeu_A 58 YFAEKVNEYGLKHLG----GDENDKCVGFNRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIV-NAKYFES-D 129 (374)
T ss_dssp HHHHHHHHHHHHHHT----CCTTEEEEEESSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHT-TCEEEEE-S
T ss_pred HHHHHHHHHHHHHhC----CCCcceEEEEcChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHc-CcEEEEe-C
Confidence 444556655555444 3 3478999999999999999988 99999999999887554 45555 9988877 1
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEE-EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKG-VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~-vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
|++++++. . +++++ |++++||||||. +..++++|.++|+++|+++|+||+|+.+..... .
T Consensus 130 --------d~~~l~~~-~------~~~~~~v~~~~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~--~ 190 (374)
T 2aeu_A 130 --------KVGEILNK-I------DKDTLVIITGSTMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF--N 190 (374)
T ss_dssp --------CHHHHHTT-C------CTTEEEEEECBCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT--T
T ss_pred --------CHHHHHhc-C------CCccEEEEEccCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc--c
Confidence 67777765 2 37899 899999999997 778999999999999999999999986521011 0
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-cC-CCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-FG-LVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~l~~~ 320 (464)
..+...+ +.+++++|+||++ +|+|+||+++++ .+.+.+..... +. +++++.+.++..++...
T Consensus 191 ~~~~~~~-------------~~di~~~S~sK~l--~g~~~G~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 191 QPPALKL-------------GADLVVTSTDKLM--EGPRGGLLAGKK-ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp CCCHHHH-------------TCSEEEEETTSSS--SSCSCEEEEEEH-HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHC
T ss_pred cCCcccc-------------CCcEEEecCcccc--cCcceEEEEECH-HHHHHHHHhhccccCCCCHHHHHHHHHHHHHH
Confidence 0112222 3457889999985 578999999854 45555544333 22 35778888877777643
Q ss_pred hh--hHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe
Q 037587 321 KF--TCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS 393 (464)
Q Consensus 321 ~~--~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~ 393 (464)
.. +.++.+..+...+++++.+.+.|... |+.+.+ +.+.+|.|.+++.... .....+++..+++++||.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~ 331 (374)
T 2aeu_A 255 NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTIN---IKKLIEIGFNLLKNYGIITI 331 (374)
T ss_dssp CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHH---HHHHHHHHHHHHHHHCEECS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeeccccccc---ccchHHHHHHHHHhCCEEEe
Confidence 21 11111111111112245666666653 566654 4444445555442110 01223466677878899999
Q ss_pred CCCCCCCCCCCeEEEEeecC--CHHHHHHHHHHHHHHHHhhC
Q 037587 394 PGSSCHCNEPGWFRICFANI--TEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 394 pg~~f~~~~~~~~Ris~~~~--~~e~l~~~l~~l~~~l~~~~ 433 (464)
||..|. ...+++||+++.. .+++++++++.|++++++..
T Consensus 332 ~g~~~~-~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 332 TVAGMP-GASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp TTSSSC-SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred cCCCCC-CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 998774 3467899999752 23348888888888887754
No 123
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.97 E-value=3.9e-30 Score=257.03 Aligned_cols=327 Identities=14% Similarity=0.119 Sum_probs=221.2
Q ss_pred CCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.....+|||+.+. +++ +++.+.+++.+.... ...+.. ....++++.+++.+.+.++
T Consensus 37 ~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~-------------~~~~~~-~~~~~~~~~l~~~la~~~g------ 96 (397)
T 2ord_A 37 EKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEK-------------LIHCSN-LFWNRPQMELAELLSKNTF------ 96 (397)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHH-------------CSCCCT-TSEEHHHHHHHHHHHHTTT------
T ss_pred CCCCEEEECCccccccccCCCCHHHHHHHHHHHHh-------------cccCcc-ccCCHHHHHHHHHHHHhcC------
Confidence 3455688998763 555 346666666654211 111111 1123455555555554332
Q ss_pred CCcEEEeCChHHHHHHHHHHhcC------C-CCeEEEcCCCCCChhh-hcccCCCcE------------EEEEecCCCCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLAD------P-GDAFLLPTPYYPGFDR-DLKWRPGVE------------IVPIHCSSSNG 168 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~------~-gd~Vlv~~p~y~~~~~-~~~~~~g~~------------~~~v~~~~~~~ 168 (464)
+++|++|+|+++++..++.++.. + ++.|++.+|+|++... .+... |.+ ++.++.
T Consensus 97 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~-g~~~~~~~~~p~~~~~~~~~~----- 170 (397)
T 2ord_A 97 GGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTAT-GQPKYQKPFEPLVPGFEYFEF----- 170 (397)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHS-BCHHHHGGGCSCCTTEEEECT-----
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhcc-CChhhccccCCCCCCeeEecC-----
Confidence 57999999999999999998763 4 4789999999976544 44444 655 666664
Q ss_pred cccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchh
Q 037587 169 FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247 (464)
Q Consensus 169 ~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~ 247 (464)
.|+++|++.+++ ++++|++++|+||||. +++.+++++|+++|+++|+++|+||+|.++.+.+. . .++.
T Consensus 171 --~d~~~l~~~l~~------~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~-~~~~ 239 (397)
T 2ord_A 171 --NNVEDLRRKMSE------DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK--L-FAYQ 239 (397)
T ss_dssp --TCHHHHHHHCCT------TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-SHHH
T ss_pred --CCHHHHHHHhhc------CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc--c-hhhh
Confidence 278999887753 7899999999999999 99999999999999999999999999987544332 1 2222
Q ss_pred hhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHH
Q 037587 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCN 325 (464)
Q Consensus 248 ~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~ 325 (464)
.+ . ....++ ||||.++ +|+|+||++++++.+ .+.. ....+..+++.|.++.++++..+.
T Consensus 240 ~~-~---------~~~d~~---s~sK~~~-~G~r~G~~~~~~~~~--~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--- 300 (397)
T 2ord_A 240 KY-G---------VVPDVL---TTAKGLG-GGVPIGAVIVNERAN--VLEPGDHGTTFGGNPLACRAGVTVIKELTK--- 300 (397)
T ss_dssp HH-T---------CCCSEE---EECGGGG-TTSCCEEEEECSTTC--CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---
T ss_pred hh-C---------CCCCee---eeccccC-CCcCeEEEEEchHhc--ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---
Confidence 22 1 112222 8899999 999999999976533 3321 122234678888888777754221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC--CCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC
Q 037587 326 YMKENRKRLRKRKEMLVSGLKVA--GIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC 400 (464)
Q Consensus 326 ~~~~~~~~~~~~~~~l~~~l~~~--g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~ 400 (464)
++.++.++++++++.+.|++. ++++ .++.+ .|+|++++... ...+++..|+ ++||.+.||.
T Consensus 301 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~------~~~~l~~~l~-~~gi~v~~~~---- 366 (397)
T 2ord_A 301 --EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMG-LMIGIQFREEV------SNREVATKCF-ENKLLVVPAG---- 366 (397)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEECTTS------CHHHHHHHHH-HTTEECEEET----
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEe-EEEEEEECChH------HHHHHHHHHH-HCCCEEccCC----
Confidence 234556667777777777664 2332 23444 58888887421 1235667765 5799999873
Q ss_pred CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 401 NEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 401 ~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++++||+++. .+++++++++++|++++++
T Consensus 367 --~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 367 --NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred --CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 5789999764 6899999999999998763
No 124
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.97 E-value=4e-29 Score=250.22 Aligned_cols=334 Identities=13% Similarity=0.106 Sum_probs=220.5
Q ss_pred CCCCCceEEeeccc--cccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 32 LHNPSGIIQMGLAE--NQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 32 ~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
+.+...+||++.+. +++. ++.+.+++.+.. .....++.. ...+.++.+++.+.+.++
T Consensus 35 ~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~-------------~~~~~~~~~-~~~~~~~~l~~~la~~~~----- 95 (406)
T 4adb_A 35 DQQGKEYIDFAGGIAVNALGHAHPELREALNEQA-------------SKFWHTGNG-YTNEPVLRLAKKLIDATF----- 95 (406)
T ss_dssp ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHH-------------TTCSCCCTT-SCCHHHHHHHHHHHHHSS-----
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHH-------------HhcccccCC-cCCHHHHHHHHHHHhhCC-----
Confidence 34456789999873 4442 466666665532 111111111 112344555555544432
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCC------------cEEEEEecCCCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHCSSSN 167 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~~ 167 (464)
.++|++|+|+++++..++.++.. +| |.|++++|+|+++...+....+ ..+..++.
T Consensus 96 -~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (406)
T 4adb_A 96 -ADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY---- 170 (406)
T ss_dssp -CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT----
T ss_pred -CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC----
Confidence 45999999999999999998864 56 9999999999987544332212 24444443
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC--CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM--THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~--s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
.|+++|++.+.. ++++|+++ |+||||.++ +.+++++|+++|+++|+++|+||+|.++.+.+. .+ .
T Consensus 171 ---~d~~~l~~~l~~------~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~-~ 237 (406)
T 4adb_A 171 ---NDINSASALIDD------STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE--LY-A 237 (406)
T ss_dssp ---TCHHHHHTTCST------TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SS-H
T ss_pred ---CcHHHHHHHhcC------CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch--hH-H
Confidence 378888887753 78888887 999999988 999999999999999999999999987544433 21 2
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHHcCCchhh
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRMLSDKKFT 323 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~ 323 (464)
. .... ...+++ ||||.++ +|+|+||++++ +.+.+.+.... ..++.+++.+.++.++++..+.
T Consensus 238 ~-~~~~---------~~~d~~---t~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~- 301 (406)
T 4adb_A 238 Y-MHYG---------VTPDLL---TTAKALG-GGFPVGALLAT-EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT- 301 (406)
T ss_dssp H-HHHT---------CCCSEE---EECGGGG-TTSCCEEEEEC-HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS-
T ss_pred H-HhcC---------CCCCEE---Eechhhc-CCCCeEEEEEc-HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh-
Confidence 1 1111 123344 7899999 99999999984 44544443322 2345778888888877753221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC----CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKVAG----IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~~g----~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
++.++.++++++++.+.|++.+ ........|+++|+.++.... ....+++..++ ++||.+.|+.
T Consensus 302 ----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~l~-~~gi~v~~~~--- 369 (406)
T 4adb_A 302 ----PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYA----GQAKQISQEAA-KAGVMVLIAG--- 369 (406)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTT----TCHHHHHHHHH-HTTEECEESS---
T ss_pred ----cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcH----HHHHHHHHHHH-HCCcEEeecC---
Confidence 3444555666666666666542 111122335688998875321 11235677765 5699999864
Q ss_pred CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 400 CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 400 ~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++++|++++. .+++++++++++|++++++.+
T Consensus 370 ---~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 401 (406)
T 4adb_A 370 ---GNVVRFAPALNVSEEEVTTGLDRFAAACEHFV 401 (406)
T ss_dssp ---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6789997655 689999999999999998754
No 125
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.97 E-value=1.7e-30 Score=259.54 Aligned_cols=337 Identities=12% Similarity=0.076 Sum_probs=210.6
Q ss_pred CCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCC----CCCcHHHHHHHHHHHHHHcCCCCCCCC
Q 037587 34 NPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQD----YHGFPDAKKELVKLMARIRGNKVKFDP 109 (464)
Q Consensus 34 ~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~ 109 (464)
++.+.|.|+.+.+..+++.+.+++.+..... .. .....|.. .....+++++++++++ +++
T Consensus 17 ~~~~~iyld~~~~~~~~~~v~~a~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~l~~~la~~~~--------~~~ 80 (400)
T 3vax_A 17 RGSHMTYLDAAATTRVDQRVADIVLHWMTAE-FG-------NAGSRHEYGIRAKRGVERAREYLASTVS--------AEP 80 (400)
T ss_dssp -----CCCCCCCCSSSCHHHHHHHHHHHHHH-HS-------CSSCHHHHHHHHHHHHHHHHHHHHHHTT--------CCG
T ss_pred ccCCcEEecCCCCCCCCHHHHHHHHHHHHhc-cC-------CCcccchhHHHHHHHHHHHHHHHHHHcC--------CCC
Confidence 4556777887777666666666666542210 00 00001111 1123456666666654 678
Q ss_pred CcEEEeCChHHHHHHHHHHhc----CCCC-eEEEcCCCCCChhhhccc--CCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLA----DPGD-AFLLPTPYYPGFDRDLKW--RPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~----~~gd-~Vlv~~p~y~~~~~~~~~--~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
++|++|+|+++++..++.+++ ++|| .|+++.++|+.+...+.. ..|++++.+++++ ++.+|+++|++++.+
T Consensus 81 ~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 158 (400)
T 3vax_A 81 DELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRP 158 (400)
T ss_dssp GGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCT
T ss_pred CcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCC
Confidence 899999999999999999998 8999 999999999876554332 2399999999864 567899999988754
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLW 262 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 262 (464)
++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+. ... . .+ + . ..
T Consensus 159 ------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~---~~~--~-~~---~-~---------~~ 210 (400)
T 3vax_A 159 ------DTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGY---GKV--P-GD---L-T---------TP 210 (400)
T ss_dssp ------TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTT---TTS--G-GG---G-G---------SC
T ss_pred ------CceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhc---CCC--C-cC---h-h---------hc
Confidence 7899999999999999987 57788899999999999999973 211 1 11 1 1 11
Q ss_pred CcEEEEcCCCcCCCCCccEEEEEE-ecCHHHH---HHHHH---------hcccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 263 SRIHIVYSLSKDFSMPGFRVGMIY-SNNERVV---SAATK---------MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 263 ~~vi~l~S~SK~~g~~GlRiG~l~-~~~~~~~---~~~~~---------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
..+++.|+||.+|.+| +|+++ ++++.+. ..+.. ....++.+...+.++..+++. ..+++++
T Consensus 211 -~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~ 284 (400)
T 3vax_A 211 -IDMISISGHKIGAPKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQ 284 (400)
T ss_dssp -CSEEEEETGGGTSCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHH
T ss_pred -CcEEEEeHHHhCCCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHH
Confidence 4478899999888666 56666 5441111 00110 111234556666666565542 2345677
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeecCCc---cEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC-----
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRCLKSNA---GLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN----- 401 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~---g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~----- 401 (464)
.++.++++++++.+.|+..|+.+..+.+ +.++++.++.. ...++...|. +||.+++|..|...
T Consensus 285 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~ 355 (400)
T 3vax_A 285 WQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDV-------DAEAFLVTLK--DLVAVATGSASTSASFTPS 355 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTC-------CHHHHHHHHH--HHHHHTTTTEEEEEEECCH
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCC-------CHHHHHHHHh--cCcEEEecccccCCCCCcc
Confidence 8888889999999999844888876654 34666776631 1224666664 79999998755431
Q ss_pred --------C----CCeEEEEe-ec-CCHHHHHHHHHHHHHHHHh
Q 037587 402 --------E----PGWFRICF-AN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 402 --------~----~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
. .+++||++ +. .+++++++++++|++++++
T Consensus 356 ~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 356 HVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred HHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 0 48999999 75 6789999999999998764
No 126
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=6.4e-29 Score=252.62 Aligned_cols=360 Identities=10% Similarity=0.039 Sum_probs=225.1
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+ .+++. +|.+.+++.+... .... ....+..+++.++++++.+.++
T Consensus 42 ~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~-------------~~~~-~~~~~~~~~~~~la~~l~~~~~-- 105 (452)
T 3n5m_A 42 WVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQ-------------TLSY-FPMSQSHEPAIKLAEKLNEWLG-- 105 (452)
T ss_dssp EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHT-------------TCCC-CCTTSEEHHHHHHHHHHHHHHT--
T ss_pred EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHH-------------hcCC-cccccCCHHHHHHHHHHHHhCC--
Confidence 4444456678999987 45553 4667776665421 1111 2223456677777777766544
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-----C---CCCeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-----D---PGDAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-----~---~gd~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
...+ |++|+|+++++..+++++. . +++.|++.+|+|+++........|. .+..++..
T Consensus 106 --~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (452)
T 3n5m_A 106 --GEYV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPP 182 (452)
T ss_dssp --SCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCC
T ss_pred --CCce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCC
Confidence 3445 9999999999999999887 5 7899999999998875433222121 23333321
Q ss_pred CCCCccc-C---------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 SSNGFRI-T---------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~~~~~~~-d---------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
..-.+.. | +++|++.+++. ...++++|++..+ +| ||.++ +.+.+++|.++|++||+++|+||+|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 259 (452)
T 3n5m_A 183 DCYRMPGIERENIYDVECVKEVDRVMTWE--LSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVIC 259 (452)
T ss_dssp CTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT
T ss_pred ccccCccCCchhhHHHHHHHHHHHHHHhc--CCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchh
Confidence 1001111 1 78898888621 1236777777666 79 99766 78889999999999999999999999
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH--------hcccC
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK--------MSSFG 303 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~--------~~~~~ 303 (464)
++...+. .+ . ..... .... +.||||+++ .| +|+||++++ +.+.+.+.. ....+
T Consensus 260 g~g~~g~--~~-~-~~~~~---------~~~d---i~t~sK~l~-~G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~ 321 (452)
T 3n5m_A 260 GFGRTGK--AF-G-FMNYD---------VKPD---IITMAKGIT-SAYLPLSATAVK-REIYEAFKGKGEYEFFRHINTF 321 (452)
T ss_dssp TTTTTSS--SS-G-GGGTT---------CCCS---EEEECGGGG-TTSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSS
T ss_pred CCCcccc--cc-h-hhhcC---------CCCC---EEeeccccc-CCCcceEEEEEC-HHHHHHHhhccCCCCccccCCC
Confidence 8543332 11 1 11111 1122 347999998 59 999999994 455554422 11223
Q ss_pred CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccCC---hhHHHH
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSNT---FEAEKE 379 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~~---~~~~~~ 379 (464)
..+++++.++.++++..+- ++..++.++..+..++.+.+.+.+++ +...++.+ .|+++++........ .....+
T Consensus 322 ~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~ 399 (452)
T 3n5m_A 322 GGNPAACALALKNLEIIEN-ENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGIELVNDKETKEPIDNDKIAS 399 (452)
T ss_dssp TTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEEEEEEETTTTEECCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEEEEecCCcccCCCCHHHHHH
Confidence 4678888888887763211 12233333333333334444444443 34445555 477777743211110 011234
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++..++ ++||.++|+..|.....+++||+++. .+++++++++++|++++++
T Consensus 400 ~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 400 VVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp HHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 666665 67999999987766567899998765 6999999999999998864
No 127
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.97 E-value=7.9e-30 Score=254.56 Aligned_cols=326 Identities=14% Similarity=0.098 Sum_probs=216.4
Q ss_pred CCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccc-cccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRE-LALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
.+...+|||+.+. |++ +++.+.+++.+.... ... ...|+ .....++++.+++++ + +
T Consensus 42 ~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~----------~~~~~~~~~-~~~~~~l~~~la~~~----~----~ 102 (395)
T 1vef_A 42 AEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAET----------LMAMPQTLP-TPMRGEFYRTLTAIL----P----P 102 (395)
T ss_dssp TTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHH----------CCCCCTTSC-CHHHHHHHHHHHHTS----C----T
T ss_pred CCCCEEEEccCccccccCCCCCHHHHHHHHHHHHh----------CCCCccccC-CHHHHHHHHHHHHhc----C----C
Confidence 3445688998875 444 446666666654211 000 11231 122345555555543 2 4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhh-hcccCCCcE------------EEEEecCCCCCcccC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDR-DLKWRPGVE------------IVPIHCSSSNGFRIT 172 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~-~~~~~~g~~------------~~~v~~~~~~~~~~d 172 (464)
.+++|++|+|+++++..++.++. .+||.|++.+|+|++... .+... |.+ +..++. .|
T Consensus 103 ~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~-g~~~~~~~~~p~~~~~~~~~~-------~d 174 (395)
T 1vef_A 103 ELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVT-WEPKYREPFLPLVEPVEFIPY-------ND 174 (395)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTC-CCHHHHGGGCSCSSCEEEECT-------TC
T ss_pred CcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhc-CCcccccccCCCCCCeeEeCC-------Cc
Confidence 67899999999999999998764 578999999999976443 44433 654 223321 47
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
+++|++.+++ ++++|+++.++||||.++ +.+++++|.++|+++|+++|+||+|.++.+.+. .+ + .....
T Consensus 175 ~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~--~~-~-~~~~~ 244 (395)
T 1vef_A 175 VEALKRAVDE------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK--RF-A-FEHFG 244 (395)
T ss_dssp HHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--SS-T-HHHHT
T ss_pred HHHHHHHhcc------CEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc--hh-H-hhhcC
Confidence 8999888753 778776655578999865 688899999999999999999999996433222 11 1 11111
Q ss_pred ccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 252 DRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 252 ~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
....++ ||||.++ +|+|+||++++++ +.+.+.. ....+..+++.+.++.++++... + ..
T Consensus 245 ---------~~~d~~---s~sK~~~-~g~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~---~--~~ 305 (395)
T 1vef_A 245 ---------IVPDIL---TLAKALG-GGVPLGVAVMREE-VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLE---R--TR 305 (395)
T ss_dssp ---------CCCSEE---EECGGGG-TTSSCEEEEEEHH-HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHH---H--HT
T ss_pred ---------CCCCEE---EEccccc-CCCceEEEEehHH-HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHH---h--CC
Confidence 112233 8899999 5999999999654 4443332 12223467788887777765321 1 23
Q ss_pred HHHHHHHHHHHHHHHHHhCCCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeE
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWF 406 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~ 406 (464)
..+.++++++++.+.|++++.++ .++ .|+|+|++++.. ..+++..+++++||.++|+ +++++
T Consensus 306 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~g~~~~~~~~~~--------~~~l~~~l~~~~gi~v~~~------~~~~i 370 (395)
T 1vef_A 306 LWERAAELGPWFMEKLRAIPSPKIREVRG-MGLMVGLELKEK--------AAPYIARLEKEHRVLALQA------GPTVI 370 (395)
T ss_dssp THHHHHHHHHHHHHHHHTSCCTTEEEEEE-ETTEEEEEESSC--------SHHHHHHHHHHHCEECEES------STTEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcCceEEEEE-EEEEEEEEEcCh--------HHHHHHHHHHHCCeEEecC------CCCEE
Confidence 45667778888888888775422 233 446889988741 1246777763679999986 25789
Q ss_pred EEEeec-CCHHHHHHHHHHHHHHH
Q 037587 407 RICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 407 Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
||+++. .+++++++++++|++++
T Consensus 371 Ri~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 371 RFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHh
Confidence 999874 68999999999999875
No 128
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=7.7e-29 Score=245.50 Aligned_cols=297 Identities=14% Similarity=0.109 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP--NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g~~~~~v~ 162 (464)
.++.+.+.+++.+.++ +++ +.+++|+|+++++..++.+++++||+|+++.|+|.+.. ..+... |++++.++
T Consensus 51 ~~~~~~~~~~la~~~g----~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~v~ 125 (376)
T 3f0h_A 51 SSTMLENEKFMLEYAK----APEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIH-EIPYVALK 125 (376)
T ss_dssp HHHHHHHHHHHHHHHT----CCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHT-TCCEEEEE
T ss_pred HHHHHHHHHHHHHHhC----CCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHc-CCceEEEe
Confidence 3555555555555544 333 34556999999999999999999999999998765543 234445 89999998
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.+. ++.+|++++++.+. +++++|++++|+||||.++| +++|.++|+++|+++|+|++|... .. .
T Consensus 126 ~~~--~~~~d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~---~~--~ 189 (376)
T 3f0h_A 126 LEH--GKKLTKEKLYEYDN------QNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFL---AD--P 189 (376)
T ss_dssp CCT--TCCCCHHHHHTTTT------SCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTT---TS--C
T ss_pred CCC--CCCCCHHHHHHhhc------cCceEEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCcccc---Cc--c
Confidence 763 57789999988653 37899999999999999998 888899999999999999999742 22 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhc-------------------cc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMS-------------------SF 302 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~-------------------~~ 302 (464)
..+... +..+++.|+||+++ .+| +|++++++ .+.+.+.... ..
T Consensus 190 -~~~~~~-------------~~d~~~~s~~K~l~~~~G--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (376)
T 3f0h_A 190 -FNMNEC-------------GADVMITGSQKVLACPPG--ISVIVLAP-RGVERVEKSKVRTMYFDLKDALKNQERGQTP 252 (376)
T ss_dssp -CCHHHH-------------TCSEEEEETTTTTCCCSS--CEEEEECH-HHHHHHHTCCCCCSTTCHHHHHHHHTTTCCS
T ss_pred -cccccc-------------CccEEEecCcccccCCCc--eEEEEECH-HHHHHhhcCCCCceeecHHHHHhhcccCCCC
Confidence 121111 34578899999998 566 57788744 4444443211 12
Q ss_pred CCCChHHHHHHHHHcCCchhhHH-HHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCN-YMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELW 381 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~ 381 (464)
++.+...+.++.+++.... +. .+++.++.++++++++.+.|+++|+.+.++....+++.-.+... ...++.
T Consensus 253 ~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~ 324 (376)
T 3f0h_A 253 FTPAVGILLQINERLKEIK--KHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTA------NAYDIF 324 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSS------CHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCC------CHHHHH
Confidence 2233333344444433111 11 36677788888889999999988877765433222222112211 123577
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 382 KKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 382 ~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..+++++||.++||.. ....+++||+++. .+++++++++++|++++++
T Consensus 325 ~~l~~~~gi~v~~g~~--~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 325 LKLKDEYGIWICPNGG--EMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHSSEECEECCG--GGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCEEEecCcc--ccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 7776555999999842 2346789999975 6899999999999999875
No 129
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.97 E-value=1.6e-29 Score=255.39 Aligned_cols=333 Identities=13% Similarity=0.099 Sum_probs=216.0
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCC---------CcHHHHHHHHHHHHHHcCCCCC
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYH---------GFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
.+.+.|+.+++..+++.+.+++.+.. .....|+... ...++|++++++++
T Consensus 17 ~~~~~Ld~~~~~~~~~~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-------- 75 (432)
T 3a9z_A 17 NRKVYMDYNATTPLEPEVIQAVTEAM-------------KEAWGNPSSSYVAGRKAKDIINTARASLAKMIG-------- 75 (432)
T ss_dssp -CCEECBTTTCCCCCHHHHHHHHHHH-------------HHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred CCcEEeeCCccCCCCHHHHHHHHHHH-------------HHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 46789998888766677777766542 1122343321 12588899998885
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChh-----------------hhcccCCCcEEEEE
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLA--------DPGDAFLLPTPYYPGFD-----------------RDLKWRPGVEIVPI 161 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~-----------------~~~~~~~g~~~~~v 161 (464)
+++++|++|+|+++++..++.+++ ++||+|+++.|+|..+. ..+... |++++.+
T Consensus 76 ~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~-g~~v~~v 154 (432)
T 3a9z_A 76 GKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQ-VAEVTFV 154 (432)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTT-SCEEEEE
T ss_pred CCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhc-CcEEEEE
Confidence 577899999999999999999986 58999999999998762 222334 8999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC----------eEEEEeccc
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR----------IHIVSDEIY 231 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~----------~~lI~Deay 231 (464)
+++++ ++.+|+++|++.+.+ ++++|++++|+||||.+++.+ +|.++|++++ +++|+||+|
T Consensus 155 ~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~ 224 (432)
T 3a9z_A 155 PVSKV-NGQVEVEDILAAVRP------TTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQ 224 (432)
T ss_dssp CCCTT-TSSCCHHHHHHTCCT------TEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTT
T ss_pred ecCcc-cCCcCHHHHHHhccC------CceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchh
Confidence 98642 457899999988753 789999999999999999854 5777788888 999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH---------Hhccc
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT---------KMSSF 302 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~---------~~~~~ 302 (464)
+.. .. ..++..+ +..+++.|+||.+| .|+||++++++.....+. .....
T Consensus 225 ~~~---~~---~~~~~~~-------------~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (432)
T 3a9z_A 225 ALG---KR---RVDVEDL-------------GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRP 282 (432)
T ss_dssp TTT---TS---CCCHHHH-------------CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSC
T ss_pred hhC---Cc---ccChhhc-------------CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccC
Confidence 742 12 1232222 12255889999875 469999996543111111 11122
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cC-----CccEEEEEecCcccccCCh
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL--KS-----NAGLFCWVDMRHLLVSNTF 374 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~--~~-----~~g~f~~~~l~~~~~~~~~ 374 (464)
++.+...+.++.++++. +.+++++.++.++++++++.+.|+++ |+.+. .+ ..+..+++.++... ..
T Consensus 283 ~~~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~- 356 (432)
T 3a9z_A 283 GTENTPMIAGLGKAADL---VSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ--LR- 356 (432)
T ss_dssp SCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT--CC-
T ss_pred CCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC--Cc-
Confidence 44667777777666653 13456778888889999999999885 65443 22 12335555555311 01
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCCCC------------------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCHCN------------------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~~~------------------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++...+ .||.+.+|..|... ..+++||+++. .+++++++++++|++++++.+
T Consensus 357 --~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 357 --GYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp --HHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 11233332 37888877655321 13789999986 579999999999999987643
No 130
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=7e-29 Score=246.37 Aligned_cols=296 Identities=14% Similarity=0.133 Sum_probs=215.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCCeEEEc-CCCCCChh-hhcccCCCcEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA---DPGDAFLLP-TPYYPGFD-RDLKWRPGVEIVP 160 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~-~p~y~~~~-~~~~~~~g~~~~~ 160 (464)
..+++++++++++.. .++++++|++|+|+++++..++.++. ++||+|+++ .|+|+.+. ..+... |++++.
T Consensus 40 ~~~~~~~l~~~~~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~-g~~~~~ 114 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSA----AASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSY-GAQVDV 114 (385)
T ss_dssp HHHHHHHHHHHTTCC----GGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHhCCC----CCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHc-CCceEE
Confidence 456778888887642 23567899999999999999999998 899999887 55665543 445555 999999
Q ss_pred Eec-CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEEeccccccccC
Q 037587 161 IHC-SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVSDEIYSGTVFD 237 (464)
Q Consensus 161 v~~-~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~Deay~~~~~~ 237 (464)
++. + .++.+|+++|++.+++ .++++|++++|+||||.+++ +++|+++|+++ |+++|+||+|+ ++
T Consensus 115 v~~~~--~~~~~d~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~---~~ 181 (385)
T 2bkw_A 115 VRPLK--IGESVPLELITEKLSQ-----NSYGAVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCS---IG 181 (385)
T ss_dssp ECCSS--TTSCCCHHHHHHHHHH-----SCCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTT---TT
T ss_pred EecCC--CCCCCCHHHHHHHHhc-----CCCCEEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccc---cC
Confidence 998 5 3567899999999864 26789999999999999987 66788899999 99999999997 32
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHH--------------------
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAA-------------------- 296 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~-------------------- 296 (464)
.. . .++. ..+.++++.|+||.+ |++| +||++++++.+.+.+
T Consensus 182 ~~--~-~~~~-------------~~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 243 (385)
T 2bkw_A 182 CE--E-FEFD-------------EWGVDFALTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTP 243 (385)
T ss_dssp TS--C-CCTT-------------TTTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHH
T ss_pred Cc--c-cccc-------------ccCceEEEecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhh
Confidence 22 1 1211 114567889999966 4567 499999655433021
Q ss_pred --HHhcc-----cCCCChHHHHHHHHHcCCchhhHHH-HHHHHHHHHHHHHHHHHHH-HhCCCeeecCC-----ccEEEE
Q 037587 297 --TKMSS-----FGLVSSQTQYLLSRMLSDKKFTCNY-MKENRKRLRKRKEMLVSGL-KVAGIRCLKSN-----AGLFCW 362 (464)
Q Consensus 297 --~~~~~-----~~~~s~~~q~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~-----~g~f~~ 362 (464)
..... +++.+...+.++..+++.. .+. +++.++.++++++++.+.| +++|+++..+. .+.++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~ 320 (385)
T 2bkw_A 244 IMENYEAGKGAYFATPPVQLINSLDVALKEI---LEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTA 320 (385)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHH---HHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEE
T ss_pred HHHhhhccCCCCCCCCCHHHHHHHHHHHHHH---HHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEE
Confidence 11111 2345666666666666431 222 5667788888999999999 88788877532 466889
Q ss_pred EecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE-ee----cCCHHHHHHHHHHHHHHHHh
Q 037587 363 VDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC-FA----NITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 363 ~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris-~~----~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++. ..++...|. ++||.+++|..+. ...+++||+ ++ ..+++++++++++|++++++
T Consensus 321 ~~~~~---------~~~~~~~l~-~~gi~v~~g~~~~-~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 321 VYVAD---------PPDVIAFLK-SHGVVIAGGIHKD-IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp EECSC---------HHHHHHHHH-HTTEECBCCCCTT-TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred EecCC---------HHHHHHHHH-HCCeEEeCCCCcc-cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence 98863 224666664 6799999987653 245789999 76 25889999999999998754
No 131
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.96 E-value=6.7e-29 Score=251.49 Aligned_cols=358 Identities=13% Similarity=0.055 Sum_probs=223.1
Q ss_pred CCCCCCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+.+ ++ .++.+.+++.+.. .....|....+..++++++++++.+.++
T Consensus 36 ~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~la~~~~-- 100 (439)
T 3dxv_A 36 RLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAA-------------ANPAGATILSASNAPAVTLAERLLASFP-- 100 (439)
T ss_dssp EEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHH-------------HSCSCSCSSSSEEHHHHHHHHHHHHTTT--
T ss_pred EEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC--
Confidence 333445567899998765 33 3466666665542 2233455455678888888888887653
Q ss_pred CCCCC-CcEEEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChhhhcccCCCcEE--------------EEEecCCCC
Q 037587 105 VKFDP-NKLVLTAGSTAANETLMFCL--ADPGDAFLLPTPYYPGFDRDLKWRPGVEI--------------VPIHCSSSN 167 (464)
Q Consensus 105 ~~~~~-~~i~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~--------------~~v~~~~~~ 167 (464)
... +++++|+|+++++..+++++ ..+++.|++.+|+|+++...+....|... ..++.+ .
T Consensus 101 --~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 176 (439)
T 3dxv_A 101 --GEGTHKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--P 176 (439)
T ss_dssp --CTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--C
T ss_pred --CCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--c
Confidence 344 69999999999999999885 33667899999999776554433323222 122221 1
Q ss_pred Cccc-----CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 168 GFRI-----TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 168 ~~~~-----d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.+.. |+++|++.+++ ....++++|+++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+.
T Consensus 177 ~~~~~~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~-- 252 (439)
T 3dxv_A 177 YRNDPTGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR-- 252 (439)
T ss_dssp BTTBTTSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS--
T ss_pred ccccccHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch--
Confidence 1111 68888888841 11236777777767788888665 44599999999999999999999987433222
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~ 319 (464)
. ....... ....++ ||||++| +|+|+||++++ +.+.+.+... ...+ .+++++.++.++++.
T Consensus 253 ~--~~~~~~~---------~~~di~---s~sK~~~-~G~riG~~~~~-~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~ 315 (439)
T 3dxv_A 253 L--HCFEHEG---------FVPDIL---VLGKGLG-GGLPLSAVIAP-AEILDCASAFAMQTLH-GNPISAAAGLAVLET 315 (439)
T ss_dssp S--SGGGGTT---------CCCSEE---EECGGGG-TTSCCEEEEEE-HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHH
T ss_pred h--hHHHhcC---------CCCCEE---EEcchhc-CCcceEEEEEC-HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHH
Confidence 1 1111111 112332 9999999 79999999995 4454444322 2234 678888888777763
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
... .++.++.++..+..++.+.+.+..++ +...++.+ .|+|+++...... .......+++..++ ++||.+.|+.
T Consensus 316 ~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~ 392 (439)
T 3dxv_A 316 IDR-DDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRG-LACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVG 392 (439)
T ss_dssp HHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEES
T ss_pred HHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecC
Confidence 221 11223333333333333444333343 34445554 5788877321100 11123345677776 5599999985
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+ .+++||+++. .+++++++++++|++++++..
T Consensus 393 ~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 393 MN----GNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp TT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 32 4789998765 589999999999999998764
No 132
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.96 E-value=1.4e-28 Score=248.25 Aligned_cols=338 Identities=14% Similarity=0.085 Sum_probs=215.3
Q ss_pred CCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccc--cccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 34 NPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRE--LALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 34 ~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
....++|++.+. +++ +++.+.+++.+.... ... ...|+.. ...++++.+++++ + +
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~----------~~~~~~~~~~~~-~~~~l~~~la~~~----~----~ 101 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDA----------MSHVMFGGITHA-PAIELCRKLVAMT----P----Q 101 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHH----------CSCCCCSSEECH-HHHHHHHHHHHHS----C----T
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHh----------cccccccccCCH-HHHHHHHHHHHhC----C----C
Confidence 445678998776 444 346666666654211 000 1133221 1245555555554 2 5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhc---C----CCCeEEEcCCCCCChhhhcccC---------------CCcEEEEEecCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLA---D----PGDAFLLPTPYYPGFDRDLKWR---------------PGVEIVPIHCSS 165 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~---------------~g~~~~~v~~~~ 165 (464)
++++|++|+|+++++..+++++. + |||.|++.+|+|+++....... .++..++++...
T Consensus 102 ~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (429)
T 1s0a_A 102 PLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSR 181 (429)
T ss_dssp TCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSB
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCccc
Confidence 78899999999999999998653 2 6899999999998764322111 123444443210
Q ss_pred -CCCc-ccCHHHHHHHHHHHhhcCCceEEEEEeCC--CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 166 -SNGF-RITISALENAYQQAQTLNLKVKGVLITNP--SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 166 -~~~~-~~d~~~l~~~i~~~~~~~~~~~~vil~~P--~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.| .+|++.|++.+++. ..++++ ++++| +||||. ..+.+++++|.++|+++|+++|+||+|.++.+.+.
T Consensus 182 ~~~~~~~~d~~~l~~~l~~~---~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~- 256 (429)
T 1s0a_A 182 MDGEWDERDMVGFARLMAAH---RHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK- 256 (429)
T ss_dssp C-CCCCGGGGHHHHHHHHHH---TTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-
T ss_pred ccccchHHHHHHHHHHHHhC---CCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch-
Confidence 1234 47899999988742 125554 55667 589996 55788899999999999999999999987433222
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-------cccCCCChHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-------SSFGLVSSQTQYL 312 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-------~~~~~~s~~~q~~ 312 (464)
. .. ..... ...++ .||||.++ +| +|+||+++++ .+.+.+... ...++.+++++.+
T Consensus 257 -~-~~-~~~~~---------~~~d~---~t~sK~l~-~G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~~a 319 (429)
T 1s0a_A 257 -L-FA-CEHAE---------IAPDI---LCLGKALT-GGTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLACAA 319 (429)
T ss_dssp -S-SG-GGGGT---------CCCSE---EEECGGGG-TSSSCCEEEEECH-HHHHHHHTSTTSSCSCCCTTTTCHHHHHH
T ss_pred -H-HH-hhhcC---------CCCCE---EEeccccc-CCCccceEEEeCH-HHHHHhhcCCCcccccCCCCCCCHHHHHH
Confidence 1 11 11111 11233 38999998 79 9999999954 455555442 1233467888888
Q ss_pred HHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhc
Q 037587 313 LSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEV 388 (464)
Q Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~ 388 (464)
+.++++...- +...+.++++++++.+.|+++ ++...++.+ .|+|++++.... ..++...|+ ++
T Consensus 320 ~~aal~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g-~~~~~~~~~~~~------~~~l~~~l~-~~ 386 (429)
T 1s0a_A 320 ANASLAILES-----GDWQQQVADIEVQLREQLAPARDAEMVADVRVLG-AIGVVETTHPVN------MAALQKFFV-EQ 386 (429)
T ss_dssp HHHHHHHHHT-----CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEET-TEEEEEESSCBC------HHHHHHHHH-HT
T ss_pred HHHHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEee-EEEEEEECCccc------HHHHHHHHH-HC
Confidence 8777753110 122344455666777777664 344344555 488998874211 224666666 67
Q ss_pred CeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 389 GLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 389 gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
||.++|+ .+++||+++. .+++++++++++|++++++.
T Consensus 387 Gi~v~~~-------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~~ 424 (429)
T 1s0a_A 387 GVWIRPF-------GKLIYLMPPYIILPQQLQRLTAAVNRAVQDE 424 (429)
T ss_dssp TEECCCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred CCEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999874 2689999764 68999999999999987543
No 133
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.96 E-value=1.5e-28 Score=245.42 Aligned_cols=338 Identities=12% Similarity=0.065 Sum_probs=220.8
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+ .|++. ++.+.+++.+..+ ... |....+..++++++++++.+..+
T Consensus 29 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~-------------~~~-~~~~~~~~~~~~~l~~~la~~~~-- 92 (395)
T 3nx3_A 29 YLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVD-------------KLL-HTSNLYYNENIAAAAKNLAKASA-- 92 (395)
T ss_dssp EEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHT-------------TCS-CCCTTSBCHHHHHHHHHHHHHHT--
T ss_pred EEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHH-------------hcc-ccccccCCHHHHHHHHHHHHhcC--
Confidence 3333455678999988 66653 4667766665421 111 11122335666666666665543
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc-------CCCCeEEEcCCCCCChhhhcccCC------------CcEEEEEecCC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA-------DPGDAFLLPTPYYPGFDRDLKWRP------------GVEIVPIHCSS 165 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~-------~~gd~Vlv~~p~y~~~~~~~~~~~------------g~~~~~v~~~~ 165 (464)
+++|++|+|+++++..++.++. .+++.|++.+|+|+++...+.... +.++..++.+
T Consensus 93 ----~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 167 (395)
T 3nx3_A 93 ----LERVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN- 167 (395)
T ss_dssp ----CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-
T ss_pred ----CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-
Confidence 5799999999999999998775 457999999999987653332221 2344555432
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
|+++|++.+++ ++++|++..++|++|.. .+.+++++|.++|+++|+++|+||+|.++...+. . .
T Consensus 168 ------d~~~l~~~l~~------~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~--~-~ 232 (395)
T 3nx3_A 168 ------DISSVEKLVNE------KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK--F-F 232 (395)
T ss_dssp ------CHHHHHTTCCT------TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-S
T ss_pred ------CHHHHHHhccC------CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc--c-h
Confidence 68888887753 77877777667777776 6788899999999999999999999987533222 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCchh
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDKKF 322 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~~ 322 (464)
.. ... +....+.||||.+| +|+|+||++++++.+.+.+... ...+..+++++.++.++++....
T Consensus 233 ~~-~~~------------~~~~d~~t~sK~~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~ 298 (395)
T 3nx3_A 233 AY-EHA------------QILPDIMTSAKALG-CGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKE 298 (395)
T ss_dssp GG-GGG------------TCCCSEEEECGGGT-TTSCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHH
T ss_pred hH-Hhc------------CCCCCEEEeccccc-CCCceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 11 111 11122448999998 6999999999554315544332 22345788888888887763211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC
Q 037587 323 TCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN 401 (464)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~ 401 (464)
+++.++.++..+..++.+.+.+.++. +...++.+ .|+|+.++... ...+++..++ ++||.++|+.
T Consensus 299 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~------~~~~~~~~l~-~~Gi~v~~~~----- 364 (395)
T 3nx3_A 299 -EKILENVNKLTPYLEQSLDELINEFDFCKKRKGLG-FMQGLSLDKSV------KVAKVIQKCQ-ENALLLISCG----- 364 (395)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEECTTS------CHHHHHHHHH-HTTEECEEET-----
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEE-EEEEEEeCCcc------hHHHHHHHHH-HCCCEEecCC-----
Confidence 22233334433444444555444443 33444444 58889887521 1234666665 6799999873
Q ss_pred CCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 402 EPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 402 ~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.+++||+++. .+++++++++++|++++++
T Consensus 365 -~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 365 -ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5789999766 6899999999999998864
No 134
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.96 E-value=1.8e-28 Score=247.81 Aligned_cols=351 Identities=13% Similarity=0.110 Sum_probs=217.6
Q ss_pred CCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.....+||++.+.+ ++ +++.+.+++.+.... ...+. ..+..+++..+++.+.+.++ ++
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-------------~~~~~-~~~~~~~~~~l~~~la~~~~----~~ 101 (433)
T 1zod_A 40 ADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGK-------------LDHLF-SEMLSRPVVDLATRLANITP----PG 101 (433)
T ss_dssp TTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHH-------------CCCCC-TTCCCHHHHHHHHHHHHHSC----TT
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh-------------Ccccc-cccCCHHHHHHHHHHHHhCC----CC
Confidence 34456789877654 33 246666666554211 11111 12224555666666655544 56
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhccc-------------CCCcEEEEEecCCCCCcc---
Q 037587 109 PNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKW-------------RPGVEIVPIHCSSSNGFR--- 170 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-------------~~g~~~~~v~~~~~~~~~--- 170 (464)
+++|++|+|+++++..+++++. ..++.|++.+|+|+++...+.. ..|++.++++......|.
T Consensus 102 ~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 181 (433)
T 1zod_A 102 LDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNG 181 (433)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETT
T ss_pred cCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCch
Confidence 7899999999999999998653 2358999999999875432110 114555444422111222
Q ss_pred -----cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 171 -----ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 171 -----~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+|++.|++.+++. ...+++ +++++| +||||. ..+.+++++|.++|+++|+++|+||+|.++.+.+. .
T Consensus 182 ~~~~~~d~~~le~~l~~~--~~~~~~-~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~--~- 255 (433)
T 1zod_A 182 AYDYLAELDYAFDLIDRQ--SSGNLA-AFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT--M- 255 (433)
T ss_dssp EECHHHHHHHHHHHHHHH--CCSCEE-EEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-
T ss_pred hhhHHHHHHHHHHHHHhc--CCCCeE-EEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch--H-
Confidence 3688999888642 112555 455677 588996 56888999999999999999999999997533222 1
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--c--ccCCCChHHHHHHHHHcCC
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--S--SFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~--~~~~~s~~~q~~~~~~l~~ 319 (464)
.. .+... .... +.||||.|| +|+|+||+++++ .+.+.+... . ..+..+++++.++.++++.
T Consensus 256 ~~-~~~~~---------~~~d---i~s~sK~~~-~G~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~ 320 (433)
T 1zod_A 256 FA-CQRDG---------VTPD---ILTLSKTLG-AGLPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDV 320 (433)
T ss_dssp ST-HHHHT---------CCCS---EEEECHHHH-TTSSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHH
T ss_pred hH-HhhcC---------CCCC---EEEeccccc-CCCCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 11 11211 1122 348999999 599999999954 555555442 1 2234678888887777653
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh----CC-CeeecCCccEEEEEecCccccc--CChhHHHHHHHHHHHhcCeEE
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKV----AG-IRCLKSNAGLFCWVDMRHLLVS--NTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g-~~~~~~~~g~f~~~~l~~~~~~--~~~~~~~~l~~~ll~~~gI~v 392 (464)
..- +...+.++++++++.+.|++ ++ +...++.+ .|+|++++..... .......+++..++ ++||.+
T Consensus 321 ~~~-----~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v 393 (433)
T 1zod_A 321 VQR-----DGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRG-LLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSM 393 (433)
T ss_dssp HHH-----TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEET-TEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEEC
T ss_pred HHh-----CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEE-EEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeE
Confidence 110 11223333344444444443 22 33344555 5788888642110 00122345777776 679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.||..|+ .++++||+++. .+++++++++++|++++++
T Consensus 394 ~~~~~~~--~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 394 NIVQLPG--MGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp CEECCTT--SCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccCCCC--CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 9998764 35799998764 6899999999999998865
No 135
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=1e-28 Score=251.07 Aligned_cols=363 Identities=11% Similarity=0.047 Sum_probs=223.8
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+ .|++. ++.+.+++.+.. .....|....+..+++.++++++.+..+
T Consensus 57 ~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~-- 121 (453)
T 4ffc_A 57 VIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQA-------------THFTHTCFMVTPYEQYVQVAELLNALTP-- 121 (453)
T ss_dssp EEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHH-------------HHCSCCTTTTSCCHHHHHHHHHHHHHSS--
T ss_pred EEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHH-------------HhccccccCcCCCHHHHHHHHHHHHhCC--
Confidence 3334456678999987 55653 566666666542 2233455444567788888888876643
Q ss_pred CCC-CCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCC-------------CcEEEEEecC--CC
Q 037587 105 VKF-DPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRP-------------GVEIVPIHCS--SS 166 (464)
Q Consensus 105 ~~~-~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~-------------g~~~~~v~~~--~~ 166 (464)
. ..++|++|+|+++++..+++.+.. .++.|++.+|+|+++...+.... ...+..++.. ..
T Consensus 122 --~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (453)
T 4ffc_A 122 --GDHDKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLR 199 (453)
T ss_dssp --CSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTT
T ss_pred --CCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCcccc
Confidence 2 257999999999999999977642 45899999999987654322110 1134444432 11
Q ss_pred CCcccC-HHHHHHHHHHHhhc-CCceEEEEEeCCCCCCC--CCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 167 NGFRIT-ISALENAYQQAQTL-NLKVKGVLITNPSNPLG--TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 167 ~~~~~d-~~~l~~~i~~~~~~-~~~~~~vil~~P~NPtG--~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+.+..+ .+.++..++...+. +++..++++++|+||+| ...+.+.+++|.++|++||+++|+||+|.++...+. .
T Consensus 200 ~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~--~ 277 (453)
T 4ffc_A 200 DEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA--W 277 (453)
T ss_dssp SCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S
T ss_pred CccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc--c
Confidence 222333 23333222222111 22445678888988877 445778899999999999999999999987533322 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~ 320 (464)
... ... +.+..+.||||+++ .|+|+||++++ +.+.+.+... ...+..++++|.++.++|+..
T Consensus 278 -~a~-~~~------------~~~pdi~t~sK~~~-~G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~ 341 (453)
T 4ffc_A 278 -FAS-EHE------------GIVPDIVTMAKGIA-GGMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVM 341 (453)
T ss_dssp -STH-HHH------------TCCCSEEEECGGGG-TTSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred -chh-hhc------------CCCcchHhhhhhhc-CCcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHh
Confidence 111 111 11222448999998 59999999984 4454444322 223457888998888877632
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCccc-ccCChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLL-VSNTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
+- +++.++.++..+..++.+.+.+.++. +...++. |+|+|+++.... .........+++..++ ++||.++|+..|
T Consensus 342 ~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~ 418 (453)
T 4ffc_A 342 RE-LDLPARARAIEASVTSRLSALAEEVDIIGEVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF 418 (453)
T ss_dssp HH-TTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT
T ss_pred hh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC
Confidence 11 12233333333333444444444443 3334444 458888874310 0111123345666665 679999998654
Q ss_pred CCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 399 HCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 399 ~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+++||+++. .+++++++++++|++++++..
T Consensus 419 ----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 419 ----GNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp ----SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999876 689999999999999998754
No 136
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.96 E-value=1.6e-28 Score=246.59 Aligned_cols=362 Identities=11% Similarity=0.030 Sum_probs=225.6
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
+.|+|..++|+.++ .+.+++.+.... ...........|.......++++.+.+.+.+.++ +++++|++++
T Consensus 26 ~~i~l~~~~~~~~~-~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~~~~~i~~~s 95 (417)
T 3n0l_A 26 EGLEMIASENFTLP-EVMEVMGSILTN-----KYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN----CKFANVQPNS 95 (417)
T ss_dssp HSEECCTTCCCCCH-HHHHHHTBGGGG-----CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cCeeeecccCCCCH-HHHHHHhhhhhc-----cccccCCCccccccchHHHHHHHHHHHHHHHHhC----CCCcceEecc
Confidence 45889888888754 455555543110 0000000001122222234555544445554444 5677898888
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
| ++++..++.+++++||+|+++.|+|..+.. ..... .+..+++++.+ .++.+|+++|++.+.+. ++++
T Consensus 96 G-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~ 167 (417)
T 3n0l_A 96 G-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKE-----KPKL 167 (417)
T ss_dssp H-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHH-----CCSE
T ss_pred H-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhc-----CCeE
Confidence 8 799999999999999999999999977544 22222 14456666655 56789999999999742 7888
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc-ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS-GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL 271 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~ 271 (464)
|++++|+| |..++ +++|.++|+++|+++|+||+|. +..+.+. .... .....+++.|+
T Consensus 168 v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~---------------~~~~di~~~s~ 225 (417)
T 3n0l_A 168 IVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGE--HPSP---------------FPYAHVVSSTT 225 (417)
T ss_dssp EEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCC---------------TTTCSEEEEES
T ss_pred EEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhccc--CCCc---------------cccceEEEeeC
Confidence 88888876 77777 7788999999999999999964 3223322 1111 01234788999
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhcccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
||.+ +|+|+||++++++.+.+.+......+ +.+...+.++..++.. ...+.+++.++.+.++++++.+.|.+.
T Consensus 226 sK~l--~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~~~ 301 (417)
T 3n0l_A 226 HKTL--RGPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKF--NLSDEWKVYAKQVRTNAQVLANVLMDR 301 (417)
T ss_dssp STTT--CSCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccc--CCCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHH--HHhhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9987 78889999997566666665543332 2233444444433332 112345677778888889999999988
Q ss_pred CCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC----CCCCeEEEEeec-----CCHHHH
Q 037587 349 GIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC----NEPGWFRICFAN-----ITEETL 418 (464)
Q Consensus 349 g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~----~~~~~~Ris~~~-----~~~e~l 418 (464)
|+++.. +..+.++|++++.... .. +.+..++.++||.++++..+.. .....+|+++.. .+++++
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i 375 (417)
T 3n0l_A 302 KFKLVSDGTDNHLVLMSFLDREF-----SG-KDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEM 375 (417)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSS-----CH-HHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHH
T ss_pred CceeccCCCCceEEEEEcccCCC-----CH-HHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHH
Confidence 888765 2334588888863210 11 2344556788999987654322 123569999853 357999
Q ss_pred HHHHHHHHHHHHhhCccccccccceeeeee
Q 037587 419 QVALQRIKVFAQSCNPQMLLLQRRSIIGKW 448 (464)
Q Consensus 419 ~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 448 (464)
++++++|++++++........+...+..+|
T Consensus 376 ~~~~~~l~~~l~~~~~~~~~~~~~~~v~~~ 405 (417)
T 3n0l_A 376 EIVSNYIADILDDVNNEKLQENIKQELKKL 405 (417)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccchhhHHHHHHHHHHH
Confidence 999999999998776433333333333333
No 137
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=5.6e-28 Score=246.15 Aligned_cols=360 Identities=8% Similarity=-0.035 Sum_probs=229.6
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+ .+++. ++.+.+++.+.... ....|....+..++++++++.+.+..+
T Consensus 44 ~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~------------~~~~~~~~~~~~~~~~~la~~l~~~~~-- 109 (460)
T 3gju_A 44 TVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKN------------LAYYHAYVGHGTEASITLAKMIIDRAP-- 109 (460)
T ss_dssp EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHH------------HSCCCCCTTCCCHHHHHHHHHHHHHSC--
T ss_pred EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHh------------ccccccccccCCHHHHHHHHHHHhhCC--
Confidence 3334456678999987 45553 46666666654221 111344344556788888888876643
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhhhcccCC------------CcEEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDRDLKWRP------------GVEIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~~------------g~~~~~v~~~ 164 (464)
.+.++|++|+|+++++..+++++.. +++.|++.+|+|+++...+.... ...+..++..
T Consensus 110 --~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 187 (460)
T 3gju_A 110 --KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAP 187 (460)
T ss_dssp --TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCC
T ss_pred --CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCC
Confidence 4678999999999999999998863 46999999999987654322110 1123344422
Q ss_pred C--C-CCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 S--S-NGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~--~-~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. . +++..+ +++|++.+++. ...++++|++..++|++|. +++.+.+++|.++|++||+++|+||+|.
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~le~~i~~~--~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 265 (460)
T 3gju_A 188 YYFRRTDRSMSEEQFSQHCADKLEEMILAE--GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT 265 (460)
T ss_dssp CGGGCSCTTCCHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccCCccccChhHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 1 0 111223 57788877642 1125665555544677776 6788889999999999999999999999
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH---------hccc
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK---------MSSF 302 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~---------~~~~ 302 (464)
++...+. . ... .... .... +.+|||+++ .| +|+||+++++ .+.+.+.. ....
T Consensus 266 g~gr~g~--~-~~~-~~~~---------~~pd---i~t~sK~l~-gG~~~lg~v~~~~-~i~~~~~~~~~~~~~~~~~~t 327 (460)
T 3gju_A 266 GFGRLGT--M-FGS-DHYG---------IKPD---LITIAKGLT-SAYAPLSGVIVAD-RVWQVLVQGSDKLGSLGHGWT 327 (460)
T ss_dssp TTTTTSS--S-CHH-HHHT---------CCCS---EEEECGGGT-TTSSCCEEEEEEH-HHHHHHHHHHHHHCSCSCCCT
T ss_pred CCCcccc--c-chH-hhcC---------CCCC---eeeeehhhc-CCCCCeEEEEECH-HHHHHHhcccccccccccCCC
Confidence 7533332 1 111 1211 1122 337899997 56 8999999954 45555532 1223
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccC-C----hhH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSN-T----FEA 376 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~-~----~~~ 376 (464)
++.++++|+++.++|+..+- +++.++.++..+..++.+.+.+.+++ +...++.+ .|+++++....... . ...
T Consensus 328 ~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 405 (460)
T 3gju_A 328 YSAHPICVAAGVANLELIDE-MDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAVEFVADKDDRVFFDASQKI 405 (460)
T ss_dssp TTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCCCGGGCH
T ss_pred CCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEEEEccCccccccccchHHH
Confidence 45788899988888873221 22355555555666666767776663 44445555 47778776432110 0 011
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 377 EKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
..+++..++ ++||.++|+. ..+++||+++. .+++++++++++|++++++.
T Consensus 406 ~~~~~~~l~-~~Gv~v~~~~-----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 406 GPQVATALA-ASGVIGRAMP-----QGDILGFAPPLCLTREQADIVVSKTADAVKSV 456 (460)
T ss_dssp HHHHHHHHH-HTTEECEECS-----SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HCCeEEecCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 234666665 6699999875 25789999664 68999999999999998764
No 138
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.96 E-value=1.8e-28 Score=246.93 Aligned_cols=332 Identities=14% Similarity=0.103 Sum_probs=219.2
Q ss_pred CCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 32 LHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 32 ~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
+.+...+|||+.+. +++ +++.+.+++.+..+ ....+.. .+..++++.+++.+.+..+
T Consensus 53 d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~-------------~~~~~~~-~~~~~~~~~l~~~la~~~g----- 113 (420)
T 2pb2_A 53 DQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGE-------------TLWHTSN-VFTNEPALRLGRKLIDATF----- 113 (420)
T ss_dssp ETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHT-------------TCCCCCT-TSCCHHHHHHHHHHHHHSS-----
T ss_pred ECCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hcccccC-ccCCHHHHHHHHHHHhhCC-----
Confidence 34456789998763 444 34666666665421 1111111 1234666777777765533
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCCcE------------EEEEecCCCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPGVE------------IVPIHCSSSN 167 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g~~------------~~~v~~~~~~ 167 (464)
.++|++|+|+++++..+++++.. +| +.|++.+|+|+++...+....|.+ +..++.
T Consensus 114 -~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~---- 188 (420)
T 2pb2_A 114 -AERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF---- 188 (420)
T ss_dssp -CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT----
T ss_pred -CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC----
Confidence 57999999999999999998865 67 589999999987654322111432 444443
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccch
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISI 246 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~ 246 (464)
.|+++|++.+++ ++++|++++++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.+. .+ ..
T Consensus 189 ---~d~~~le~~i~~------~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~--~~-~~ 256 (420)
T 2pb2_A 189 ---NDLHAVKAVMDD------HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD--LF-AY 256 (420)
T ss_dssp ---TCHHHHHHHCCT------TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SS-HH
T ss_pred ---CCHHHHHHHhcc------CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc--HH-HH
Confidence 278999888753 7888888777888884 68999999999999999999999999987543332 21 11
Q ss_pred hhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--hcccCCCChHHHHHHHHHcCCchhhH
Q 037587 247 MEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--MSSFGLVSSQTQYLLSRMLSDKKFTC 324 (464)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--~~~~~~~s~~~q~~~~~~l~~~~~~~ 324 (464)
+... ...+++ ||||.+| +|+|+||++++++ +.+.+.. ....+..+++++.++.++|+..+.
T Consensus 257 -~~~~---------~~~dii---t~sK~l~-~G~~iG~~~~~~~-l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~-- 319 (420)
T 2pb2_A 257 -MHYG---------VTPDIL---TSAKALG-GGFPVSAMLTTQE-IASAFHVGSHGSTYGGNPLACAVAGAAFDIINT-- 319 (420)
T ss_dssp -HHHT---------CCCSEE---EECGGGG-TTSCCEEEEECHH-HHTTCC----CCEECCCHHHHHHHHHHHHHHSS--
T ss_pred -HhcC---------CCCCeE---Eeccccc-CCCceEEEEEhHH-HHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--
Confidence 1111 113333 7899999 9999999999554 4443332 222235688888887777653221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC--C---CeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC
Q 037587 325 NYMKENRKRLRKRKEMLVSGLKVA--G---IRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH 399 (464)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~~--g---~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~ 399 (464)
+...+.++++++++.+.|+++ + +...++.+ .|+|++++.... ....+++..++ ++||.+.|+.
T Consensus 320 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~----~~~~~l~~~l~-~~Gi~v~~~~--- 387 (420)
T 2pb2_A 320 ---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMG-LLIGAELKPKYK----GRARDFLYAGA-EAGVMVLNAG--- 387 (420)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEET-TEEEEEECGGGT----TCHHHHHHHHH-HTTEECEESS---
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecc-eEEEEEECCCch----HHHHHHHHHHH-HCCCEEEeCC---
Confidence 223444555666666666553 2 22234444 588888864210 01235677766 5799999873
Q ss_pred CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 400 CNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 400 ~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
++++||+++. .+++++++++++|++++++
T Consensus 388 ---~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 388 ---ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp ---TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5689999764 6899999999999998865
No 139
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=7.8e-29 Score=247.83 Aligned_cols=326 Identities=13% Similarity=0.158 Sum_probs=226.3
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
.++|||+.+.++++ +.+.+++.+... . ..|.+..+..+++++++++++ .+ +++++
T Consensus 30 ~~~id~~~~~~~~~-~~v~~a~~~~~~-------------~-~~y~~~~~~~~l~~~la~~~~--------~~--~~v~~ 84 (399)
T 2oga_A 30 VPFLDLKAAYEELR-AETDAAIARVLD-------------S-GRYLLGPELEGFEAEFAAYCE--------TD--HAVGV 84 (399)
T ss_dssp BCSCCHHHHHHHTH-HHHHHHHHHHHH-------------H-TCCSSSHHHHHHHHHHHHHTT--------SS--EEEEE
T ss_pred CcccccCcCCCCCC-HHHHHHHHHHHh-------------c-CCCCCchhHHHHHHHHHHHHC--------CC--eEEEe
Confidence 36789999888766 555555555311 1 256655677899999999975 22 56777
Q ss_pred CChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 116 AGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 116 ~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+|+++++..++.++ +++||+|+++.|+|+.+...+... |++++.+++++ +++.+|++.+++.+++ ++++|+
T Consensus 85 ~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~ 156 (399)
T 2oga_A 85 NSGMDALQLALRGLGIGPGDEVIVPSHTYIASWLAVSAT-GATPVPVEPHE-DHPTLDPLLVEKAITP------RTRALL 156 (399)
T ss_dssp SCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCS-SSSSBCHHHHHHHCCT------TEEEEC
T ss_pred cCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHC-CCEEEEEecCC-CCCCcCHHHHHHhcCC------CCeEEE
Confidence 88899999999999 899999999999999998888877 99999999874 3578999999988754 677666
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC--
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL-- 271 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~-- 271 (464)
|+||||...+ +++|.++|+++|+++|+||+|..+. +... .+..+ ..+++.|+
T Consensus 157 ---~~n~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-----~~~~~--------------~di~~~S~~~ 211 (399)
T 2oga_A 157 ---PVHLYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGR-----RIGAG--------------SSVAAFSFYP 211 (399)
T ss_dssp ---CBCGGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTE-----ETTCT--------------TCEEEEECCT
T ss_pred ---EeCCcCCccC---HHHHHHHHHHcCCEEEEECcccccCccCCe-----ecccc--------------cCEEEEeCCC
Confidence 5789999876 6778888999999999999998542 2211 11101 23678888
Q ss_pred CcCCCCCccEEEEEEecCHHHHHHHHHhccc--------------CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHH
Q 037587 272 SKDFSMPGFRVGMIYSNNERVVSAATKMSSF--------------GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKR 337 (464)
Q Consensus 272 SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 337 (464)
||.+|.+| |+||++++++.+.+.+...... +.++.+.+.++...++.. ++..+..++.
T Consensus 212 sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~-------~~~~~~~~~~ 283 (399)
T 2oga_A 212 GKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHL-------DSWNGRRSAL 283 (399)
T ss_dssp TSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTH-------HHHHHHHHHH
T ss_pred CccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHH-------HHHHHHHHHH
Confidence 79999779 9999998756666555543221 134566666665555432 2223334455
Q ss_pred HHHHHHHHHhC-CCeee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC---------C-----
Q 037587 338 KEMLVSGLKVA-GIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC---------N----- 401 (464)
Q Consensus 338 ~~~l~~~l~~~-g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~---------~----- 401 (464)
.+++.+.|.++ |+.+. .+.++.++|+.++-... ...++...| .++||.++++..... .
T Consensus 284 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 357 (399)
T 2oga_A 284 AAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE-----RRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGS 357 (399)
T ss_dssp HHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS-----SHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTS
T ss_pred HHHHHHHhccCCCccccCCCCCCcceeEEEEEECC-----CHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCC
Confidence 66788888876 66654 24445555533321110 122466666 467999987532100 0
Q ss_pred C-------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 402 E-------PGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 ~-------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. .+++||+++. .++++++.++++|++++++.+
T Consensus 358 ~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 358 LPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp CHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred ChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 0 2579999976 689999999999999987643
No 140
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.7e-28 Score=241.35 Aligned_cols=288 Identities=13% Similarity=0.098 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh-hhhcccCCCcEEEEEecCC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF-DRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~~~g~~~~~v~~~~ 165 (464)
.++.+.+.+.+.+.++ . .++++|++|+|+++++.+++.+++.+ +.+++..|.|... ...+... |++++.++.+
T Consensus 42 ~~~~~~~~~~la~~~g--~-~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~-g~~~~~v~~~- 115 (362)
T 3ffr_A 42 EEVYKTASDNLKTLLE--L-PSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSKRFYEFAGEL-GREAYKEEAA- 115 (362)
T ss_dssp HHHHHHHHHHHHHHTT--C-CTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHHHHHHHHHHT-TCEEEEEECC-
T ss_pred HHHHHHHHHHHHHHhC--C-CCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHHHHHHHHHHh-CCCeEEEecC-
Confidence 3455555555555544 1 14678999999999999999999988 5566666666522 2344555 9999999975
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC-CeEEEEeccccccccCCCCCCcc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK-RIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~-~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
.++.+|+++++ + .+++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+.. .. + .
T Consensus 116 -~~~~~d~~~l~--~------~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~---~~--~-~ 177 (362)
T 3ffr_A 116 -FGKGFYPADIT--V------PADAEIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLP---YP--K-F 177 (362)
T ss_dssp -TTCCCCGGGCC--C------CTTCCEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTT---SS--C-C
T ss_pred -CCCCCCHHHHh--c------cCCccEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccC---Cc--c-c
Confidence 35678999887 3 248999999999999999998 66688889999 9999999999732 21 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcc----------------------
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSS---------------------- 301 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~---------------------- 301 (464)
. + ....+++.|+||+++ ++|+ |+++++++ +.+.+.....
T Consensus 178 ~---~------------~~~d~~~~s~~K~~~~~~G~--g~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~ 239 (362)
T 3ffr_A 178 D---W------------TKIDSVFFSVQKCFGLPAGL--GVWILNDR-VIEKSKALLAKRKSIGTYHTIPSMLEKARVNQ 239 (362)
T ss_dssp C---T------------TSCSEEEEETTSTTCCCSCC--EEEEEEHH-HHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTC
T ss_pred C---h------------hHCcEEEEecccccCCCCce--EEEEECHH-HHHHhhhccccCCCCcccccHHHHHHHhhcCC
Confidence 1 1 013477899999998 7784 66777544 4333333221
Q ss_pred -cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----CccEEEEEecCcccccCChh
Q 037587 302 -FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS----NAGLFCWVDMRHLLVSNTFE 375 (464)
Q Consensus 302 -~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~f~~~~l~~~~~~~~~~ 375 (464)
.++.+...+.++..+++... ...+++.++.++++++++.+.|+++ |+++.++ .++.++|+.++.
T Consensus 240 ~~~~~~~~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-------- 309 (362)
T 3ffr_A 240 TPETPNAMNIFLLGKVTGDML--QISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-------- 309 (362)
T ss_dssp CSSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS--------
T ss_pred CCCCchHHHHHHHHHHHHHHH--HccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC--------
Confidence 44566666766666654211 1125667788888999999999998 8887652 235678888874
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
...++...|. ++||.+++|..+ ..++++||+++. .+++++++++++|++++
T Consensus 310 ~~~~~~~~l~-~~gi~~~~g~~~--~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 310 LPGEINKILE-PFDMAVGAGYGS--KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp CHHHHHHHHG-GGTEEEEECSGG--GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-HCCeEEecCccc--cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 1234666665 559999998543 346899999986 68999999999998764
No 141
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=4.7e-28 Score=241.10 Aligned_cols=298 Identities=15% Similarity=0.170 Sum_probs=213.2
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVE 157 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~ 157 (464)
.|.+..+..++|++++++++ . +++|++++| ++++.+++.++ +++||+|+++.|+|+.+...+... |++
T Consensus 33 ~~~~~~~~~~l~~~la~~~~--------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 101 (388)
T 1b9h_A 33 WRMGGDEVNSFEREFAAHHG--------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFTFISSSQAAQRL-GAV 101 (388)
T ss_dssp BTTTCSHHHHHHHHHHHHTT--------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred eecCCHHHHHHHHHHHHHhC--------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 45555678999999999986 2 357777777 89999999999 899999999999999998888777 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-c
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-F 236 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~ 236 (464)
++.++++++ +|.+|++.|++.+++ ++++|+ |+||||.+.+ +++|.++|+++|+++|+|++|+... +
T Consensus 102 ~~~v~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D~a~~~g~~~ 168 (388)
T 1b9h_A 102 TVPVDVDAA-TYNLDPEAVAAAVTP------RTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQDAAHAHGARW 168 (388)
T ss_dssp EEEECBCTT-TCCBCHHHHHHHCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEE
T ss_pred EEEEecCCC-cCCCCHHHHHHhcCc------CceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEecchhcCCcc
Confidence 999998753 578999999988753 677655 9999999865 6778888889999999999998522 2
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH--HHHHHHhccc------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV--VSAATKMSSF------------ 302 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~--~~~~~~~~~~------------ 302 (464)
.+. .+..+ + ++++.||||..+++|.|+||++++++.+ .+.+......
T Consensus 169 ~~~-----~~~~~-------------~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (388)
T 1b9h_A 169 QGK-----RVGEL-------------D-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHK 229 (388)
T ss_dssp TTE-----EGGGS-------------S-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCC
T ss_pred CCe-----ecccc-------------c-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceee
Confidence 111 21111 2 4678899977777778999999976545 3434332211
Q ss_pred --CC---CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec------CCccEEEEEecCcccc
Q 037587 303 --GL---VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK------SNAGLFCWVDMRHLLV 370 (464)
Q Consensus 303 --~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~------~~~g~f~~~~l~~~~~ 370 (464)
+. .+.+...++...+ +++++.++.++++++++.+.|+++ |+.+.. +.+++|+|+.++...
T Consensus 230 ~~g~~~~~~~~~~a~~~~~~-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (388)
T 1b9h_A 230 IAGSNMRLNEFSASVLRAQL-------ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT- 301 (388)
T ss_dssp SCCCBCBCBHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC-
T ss_pred cccccCCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC-
Confidence 11 2223222222222 224556667777889999999987 787764 345679999997420
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCC---------------------------CCeEEEEeec-C-CHHHHHHH
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHCNE---------------------------PGWFRICFAN-I-TEETLQVA 421 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~---------------------------~~~~Ris~~~-~-~~e~l~~~ 421 (464)
.....++...|. ++||.++++....... .+.+||+++. + ++++++.+
T Consensus 302 ---~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~ 377 (388)
T 1b9h_A 302 ---EERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT 377 (388)
T ss_dssp ---HHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred ---cccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence 012335666665 6799998875321000 1359999977 7 89999999
Q ss_pred HHHHHHHHHh
Q 037587 422 LQRIKVFAQS 431 (464)
Q Consensus 422 l~~l~~~l~~ 431 (464)
++.|++++++
T Consensus 378 ~~~l~~~~~~ 387 (388)
T 1b9h_A 378 AEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 142
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=6.6e-28 Score=242.69 Aligned_cols=345 Identities=14% Similarity=0.112 Sum_probs=210.5
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHH-HHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELV-KLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~~~~~~~~~~~~~~~~i~it 115 (464)
+.|+|..++|+. ++.+.+++.+..... .. .+ ......|+.. ...++.+.++ +.+.+..+ .+. ..+++
T Consensus 33 ~~i~l~~~~~~~-~~~v~~a~~~~~~~~-~~-~~---~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~----~~~-~~v~~ 100 (425)
T 3ecd_A 33 SQVELIASENIV-SRAVLDAQGSVLTNK-YA-EG---YPGKRYYGGC-EFADEVEALAIERVKRLFN----AGH-ANVQP 100 (425)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGSS-CT-TC----------------CCHHHHHHHHHHHHHHT----CSE-EECCC
T ss_pred cceeeecccCCC-CHHHHHHHhhhhhcc-cc-cC---CCcchhcCCC-hHHHHHHHHHHHHHHHHhC----CCC-ceeec
Confidence 458998888887 445555555431100 00 00 0000112111 1112333333 44444433 333 23458
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCC---hhhhcccCCCc--EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 116 AGSTAANETLMFCLADPGDAFLLPTPYYPG---FDRDLKWRPGV--EIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|+++++..++.+++++||.|+++.|+|+. +....... |. +++.++.++ +.+.+|+++|++.+.+. ++
T Consensus 101 ~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~-----~~ 173 (425)
T 3ecd_A 101 HSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALS-GKWFNALQYGVSR-DTMLIDYDQVEALAQQH-----KP 173 (425)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCCT-TTSSCCHHHHHHHHHHH-----CC
T ss_pred CchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhc-ccceeeeecCCCc-ccCccCHHHHHHHHhhc-----CC
Confidence 888899999999999999999999999987 22111122 44 555666553 35789999999998742 78
Q ss_pred EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc-ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 191 KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT-VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 191 ~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
++|++++|+||+. .++++|.++|+++|+++|+||+|... .+.+. . .+.. + ...+++.
T Consensus 174 ~~v~~~~~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~--~-~~~~---~-----------~~di~~~ 231 (425)
T 3ecd_A 174 SLIIAGFSAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGR--H-ANPV---E-----------HAHVVTS 231 (425)
T ss_dssp SEEEEECSCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS--S-CCGG---G-----------TCSEEEE
T ss_pred cEEEEccccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhccc--c-cCch---h-----------cCcEEEe
Confidence 8999999999753 34688999999999999999996432 23322 1 1211 1 1237789
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLK 346 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 346 (464)
||||++ +|+|+||++++++.+.+.+......+ +.+...+.++..++.. ...+++++.++.++++++++.+.|.
T Consensus 232 s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~--~~~~~~~~~~~~~~~~~~~l~~~L~ 307 (425)
T 3ecd_A 232 TTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGE--ALTDDFKTYIDRVLANAQALGDVLK 307 (425)
T ss_dssp ESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHH--HTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 999988 67899999997666666555443322 2333333333333321 1123456777888888899999999
Q ss_pred hCCCeeecC-CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeec-----CCHH
Q 037587 347 VAGIRCLKS-NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFAN-----ITEE 416 (464)
Q Consensus 347 ~~g~~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~-----~~~e 416 (464)
+.|+++.++ .+++++|+.++.... .. +.+...+.++||.++ ||..+.....+++|+++.. .+++
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e 381 (425)
T 3ecd_A 308 AGGVDLVTGGTDNHLLLVDLRPKGL-----KG-AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAA 381 (425)
T ss_dssp HTTCEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHH
T ss_pred hCCCeeccCCCCceEEEEEeCCCCC-----CH-HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHH
Confidence 989888753 456788998864211 11 234455577899999 5543333345689999543 2489
Q ss_pred HHHHHHHHHHHHHHhh
Q 037587 417 TLQVALQRIKVFAQSC 432 (464)
Q Consensus 417 ~l~~~l~~l~~~l~~~ 432 (464)
++++++++|++++++.
T Consensus 382 ~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 382 EFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999886
No 143
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.96 E-value=2.3e-28 Score=240.50 Aligned_cols=297 Identities=11% Similarity=0.107 Sum_probs=200.5
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--eEEEcCCCCCChhh---hccc
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGD--AFLLPTPYYPGFDR---DLKW 152 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~p~y~~~~~---~~~~ 152 (464)
..|++..+..+|+++++++++ . +. .++++|+++++..++.+++.+|| .|+++.++|..... ....
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~--------~-~~-~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~ 110 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG--------M-DD-AVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKEL 110 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT--------C-SE-EEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHH
T ss_pred ccccCChHHHHHHHHHHHHhC--------C-Cc-EEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhc
Confidence 457766678999999999986 2 23 34557778899999999988888 67776666443322 2334
Q ss_pred CCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 153 RPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 153 ~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
. |++++.++. +++.+|++++++. .++++|++++||||| |.+++.+++++|+++|+++|+++|+||+|
T Consensus 111 ~-g~~~~~v~~---~~~~~d~~~l~~~--------~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~ 178 (357)
T 3lws_A 111 H-PIETILVGA---ADRLMTLDEIKAL--------PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGAR 178 (357)
T ss_dssp S-SCEEEECSC---TTSCCCHHHHHTC--------CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred c-CcEEEEecC---CCCCcCHHHHhcC--------cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECch
Confidence 4 888888874 2456899998875 147899999999998 99999999999999999999999999998
Q ss_pred ccc--ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC-CCCccEEEEEEecCHHHHHHHHHhccc-C---C
Q 037587 232 SGT--VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF-SMPGFRVGMIYSNNERVVSAATKMSSF-G---L 304 (464)
Q Consensus 232 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~-g~~GlRiG~l~~~~~~~~~~~~~~~~~-~---~ 304 (464)
... .+.+. +...+.. ..+ +++.|+||+| |+.| ||++++ +.+.+.+.+.... . .
T Consensus 179 ~~~~~~~~~~-----~~~~~~~---------~~d--~~~~s~sK~~~~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~ 238 (357)
T 3lws_A 179 LFEMLPYYEK-----TAAEIAG---------LFD--SIYISFYKGLGGIAG---AILAGP-AAFCQTARIWKRRYGGDLI 238 (357)
T ss_dssp HHHHHHHHTC-----CHHHHHT---------TSS--EEEEESSSTTCCSSC---EEEEEC-HHHHHHHHHHHHHTTCCCS
T ss_pred hhhhhhhcCC-----ChHHHHh---------cCC--EEEEeccccCCCCce---EEEEcC-HHHHHHHHHHHHHhcCCcc
Confidence 621 11122 2222322 113 3478999999 5444 999984 4555544433221 1 1
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCccEEEEEecCcccccCChhHHHHHHH
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
...+.+.++...+++ +.+.. +.+.++++++.+.|+++ |+++. .+.+++|+|++++.... ....++..
T Consensus 239 ~~~~~~~~~~~~l~~------~~~~~-~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 307 (357)
T 3lws_A 239 SLYPYIVSADYYYEL------RKDRM-GQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA----DISPKLEQ 307 (357)
T ss_dssp CCHHHHHHHHHHHHH------HTTCH-HHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH----HHHHHHHH
T ss_pred cchHHHHHHHHHHHH------HHHHH-HHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH----HHHHHHHH
Confidence 223333333333332 22222 23466778899999987 88873 34555699999874210 11234544
Q ss_pred HHHHhcCeEEeCCCCCCCCCCCeEEEEeec----CCHHHHHHHHHHHHHHH
Q 037587 383 KIIFEVGLNISPGSSCHCNEPGWFRICFAN----ITEETLQVALQRIKVFA 429 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~----~~~e~l~~~l~~l~~~l 429 (464)
.+ .++||.++||..|. .+.+++|++++. .+++++++++++|.+++
T Consensus 308 ~l-~~~Gi~v~~g~~~~-~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 308 VQ-EETGLGFVGYLVDK-DGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp HH-HHHCEESCSCCEEC-SSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred HH-HhcCeEEecccccC-CCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 44 67899999997665 244589999863 37899999999998764
No 144
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=2.5e-27 Score=241.34 Aligned_cols=357 Identities=10% Similarity=0.008 Sum_probs=225.3
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccc-cCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELA-LFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+|||+.+ .|++. +|.+.+++.+... ... .|....+..++++++++++.+.++
T Consensus 43 ~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~- 108 (459)
T 4a6r_A 43 YLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQME-------------ELPFYNTFFKTTHPAVVELSSLLAEVTP- 108 (459)
T ss_dssp EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHH-------------HCSCCCTTSSSCCHHHHHHHHHHHHHSC-
T ss_pred EEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHHHH-------------hccccccccccCCHHHHHHHHHHHHhCC-
Confidence 3334455678999987 56653 4667766665421 111 343334557788888888877654
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhhhcccCCC------------cEEEEEec
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHC 163 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~ 163 (464)
.+.++|++|+|+++++..+++++.. +++.|++.+|+|+++...+....| ..+..++.
T Consensus 109 ---~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (459)
T 4a6r_A 109 ---AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQ 185 (459)
T ss_dssp ---TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECC
T ss_pred ---CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCC
Confidence 5678999999999999999999875 579999999999977643222101 12233332
Q ss_pred CC--C-CCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC-CCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 164 SS--S-NGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPS-NPLGT-AMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 164 ~~--~-~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
.. . +++ .| +++|++.+.+.. ..+++ +++++|+ |++|. .++.+.+++|.++|++||+++|+||+
T Consensus 186 p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv 261 (459)
T 4a6r_A 186 PWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVA-AFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEV 261 (459)
T ss_dssp CCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECT
T ss_pred CccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEE-EEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 11 0 111 34 677888776421 12444 5566664 55555 55899999999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHH-----HhcccCCC
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAAT-----KMSSFGLV 305 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~-----~~~~~~~~ 305 (464)
|.++...+. . .. ..... ....+ .+|||+++..|+|+||+++ ++.+.+.+. .....++.
T Consensus 262 ~~g~gr~G~--~-~~-~~~~~---------~~pdi---~t~sK~l~gg~~~lg~v~~-~~~i~~~~~~~~~~~~~~t~~~ 324 (459)
T 4a6r_A 262 ICGFGRTGE--W-FG-HQHFG---------FQPDL---FTAAKGLSSGYLPIGAVFV-GKRVAEGLIAGGDFNHGFTYSG 324 (459)
T ss_dssp TTTTTTTSS--S-SH-HHHHT---------CCCSE---EEECGGGGTTSSCCEEEEE-CHHHHHHHHHHCTTHHHHHHCS
T ss_pred ccCCCcccc--c-ch-HhhcC---------CCCCe---eehhhhhcCCCCCccceee-CHHHHHHhhcCCCcccCCCCCC
Confidence 998543332 1 11 11211 11233 3789999844499999999 455555554 12233457
Q ss_pred ChHHHHHHHHHcCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCccccc-----CChhHHH
Q 037587 306 SSQTQYLLSRMLSDKKFTCNYMKENR-KRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLVS-----NTFEAEK 378 (464)
Q Consensus 306 s~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~~-----~~~~~~~ 378 (464)
++++++++.++|+..+- ++..++.+ +..+..++.+.+.|.++ .+...++.+. |+++++...... .......
T Consensus 325 ~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 402 (459)
T 4a6r_A 325 HPVCAAVAHANVAALRD-EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGM-VQAFTLVKNKAKRELFPDFGEIGT 402 (459)
T ss_dssp CHHHHHHHHHHHHHHHH-TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETT-EEEEEECSBTTTTBCCSSTTHHHH
T ss_pred CHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEE-EEEEEEecCccccccccchHHHHH
Confidence 88999988888873221 12233444 33344444454555554 3445555554 777777542111 0111233
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+++..++ ++||.++|+. +++||+++. .+++++++++++|++++++..
T Consensus 403 ~~~~~l~-~~Gv~v~~~g-------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 403 LCRDIFF-RNNLIMRACG-------DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp HHHHHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCeEEecCC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666665 5699999862 689999765 689999999999999987654
No 145
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.96 E-value=1.4e-27 Score=238.76 Aligned_cols=279 Identities=17% Similarity=0.148 Sum_probs=193.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~ 160 (464)
...++++.++++++ .+ +.++++++++++..++.+++++||.|+++.|+|+++...+ ... |.+++.
T Consensus 65 ~~~~l~~~la~~~g--------~~--~~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~~~~ 133 (398)
T 2rfv_A 65 TTDALEKKLAVLER--------GE--AGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKF-GINVRF 133 (398)
T ss_dssp HHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------CC--cEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHc-CCEEEE
Confidence 34667777777764 33 4555556669999999999999999999999999877665 555 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+ |++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....+. .
T Consensus 134 v~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~- 195 (398)
T 2rfv_A 134 VDAA-------KPEEIRAAMRP------ETKVVYIETPANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ-Q- 195 (398)
T ss_dssp ECTT-------SHHHHHHHCCT------TEEEEEEESSBTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C-
T ss_pred eCCC-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C-
Confidence 8863 78899888753 7899999999999999986 788899999999999999999864332 1
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcc-c--CCCChHHHHHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSS-F--GLVSSQTQYLLSRM 316 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~-~--~~~s~~~q~~~~~~ 316 (464)
. ..+ +.++++.|+||.++.+|+|+ ||++++++.+.+.++.... + ...+++.+.++...
T Consensus 196 ----~-~~~-------------~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2rfv_A 196 ----P-LQL-------------GADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRG 257 (398)
T ss_dssp ----G-GGG-------------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHH
T ss_pred ----c-hhh-------------CCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhh
Confidence 1 112 45688999999998899998 9999965544424443322 2 35678888888888
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeeec----CCccEEEEEecCcccccCChhHH
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA---------------GIRCLK----SNAGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------g~~~~~----~~~g~f~~~~l~~~~~~~~~~~~ 377 (464)
++.. ..+++ .+.++...+.+.|++. ++.+.. ..++ +++++++.. .
T Consensus 258 l~~~---~~~~~----~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~-~~~~~~~~~------~-- 321 (398)
T 2rfv_A 258 VKTL---GIRME----RHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGG-IISFEIAGG------L-- 321 (398)
T ss_dssp HTTH---HHHHH----HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEETTH------H--
T ss_pred hhhH---HHHHH----HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce-EEEEEEcCC------H--
Confidence 8653 22232 2334445555556543 222222 2355 566688631 0
Q ss_pred HHHHHHHHHh---cCeEEeCCCCCCC---------------------CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 378 KELWKKIIFE---VGLNISPGSSCHC---------------------NEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 378 ~~l~~~ll~~---~gI~v~pg~~f~~---------------------~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
+....++++ .||.+.+|..|.. ..++++|||++. .++++++.++++|++
T Consensus 322 -~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 322 -EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp -HHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHh
Confidence 112334433 3888888866420 125799999997 456777777766654
No 146
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=1.4e-28 Score=242.20 Aligned_cols=328 Identities=13% Similarity=0.101 Sum_probs=213.7
Q ss_pred ceEEeeccccccc-HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEe
Q 037587 37 GIIQMGLAENQLS-FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLT 115 (464)
Q Consensus 37 ~~i~l~~~~n~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it 115 (464)
..+.++.++|+++ ++.+.+++.+. .....|.+..+..+|+++++++++ .+ ..+++
T Consensus 14 ~~~~~~~~~~~~g~~p~v~~ai~~~--------------~~~~~~~~~~~~~~l~~~la~~~~--------~~--~~i~~ 69 (359)
T 3pj0_A 14 PYKLGGNGPRNVGVLTEALQNIDDN--------------LESDIYGNGAVIEDFETKIAKILG--------KQ--SAVFF 69 (359)
T ss_dssp SEESSSSSCCBHHHHHHHTTTSCTT--------------CBCCBTTBSHHHHHHHHHHHHHHT--------CS--EEEEE
T ss_pred chhhcCCCccccCCCHHHHHHHHhh--------------cccCcccCCHHHHHHHHHHHHHhC--------CC--cEEEe
Confidence 3355667778774 35555544431 122356655567899999999985 22 23555
Q ss_pred CChHHHHHHHHHHhcCCCCe--EEEcCCCCCChhhh--c-ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 116 AGSTAANETLMFCLADPGDA--FLLPTPYYPGFDRD--L-KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 116 ~G~~~al~~~~~~l~~~gd~--Vlv~~p~y~~~~~~--~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
+|+++++..++.+++.+||. |+++.++|...... . ... |++++.++.+ ++.+|++++++. . +++
T Consensus 70 ~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~---~~~~d~~~l~~~-~------~~~ 138 (359)
T 3pj0_A 70 PSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQ-QITPLLLGTA---NQLLTIDDIKSL-R------EPV 138 (359)
T ss_dssp SCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHH-CCEEEECSCT---TSCCCHHHHHTC-S------SCC
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhc-CceEEecCCc---CCCcCHHHHHhc-c------CCc
Confidence 78889999999999888886 55555554322221 1 334 8899888763 467899999876 2 378
Q ss_pred EEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEc
Q 037587 191 KGVLITNPSNPL-GTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVY 269 (464)
Q Consensus 191 ~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~ 269 (464)
++|++++||||| |.+++.+++++|+++|+++|+++|+|++|........ ..+...+.. ...+++.
T Consensus 139 ~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~~-----------~~d~~~~ 204 (359)
T 3pj0_A 139 SSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFY---QKSAEEICA-----------LFDSVYV 204 (359)
T ss_dssp SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHH---TCCHHHHHT-----------TCSEEEE
T ss_pred eEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhh---CCCHHHhhc-----------cCCEEEE
Confidence 999999999998 7999999999999999999999999999864321111 012222222 1224456
Q ss_pred CCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-cC-C--CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 270 SLSKDFSMPGFRVGMIYSNNERVVSAATKMSS-FG-L--VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 270 S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~-~~-~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
||||.++.++ . ||+++ ++.+.+.+..... +. . ...+.+.++...++ ... +..+.+.++++++.+.|
T Consensus 205 s~sK~~~~~~-g-g~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~------~~~-~~~~~~~~~~~~l~~~L 274 (359)
T 3pj0_A 205 SFYKGIGGIA-G-AILAG-NDDFVQEAKIWKRRYGGDLISLYPYILSADYYFE------KRI-GKMAEYFEAAKGLAERF 274 (359)
T ss_dssp ESSSTTCCSS-C-EEEEE-CHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHH------HHG-GGHHHHHHHHHHHHHHH
T ss_pred eccccCCCcc-e-EEEEC-CHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHH------HHH-HHhHHHHHHHHHHHHHH
Confidence 9999987553 3 78787 4555555544221 11 1 12233333223332 122 22334567778899999
Q ss_pred HhC-CCeee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec----CCHHHHH
Q 037587 346 KVA-GIRCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN----ITEETLQ 419 (464)
Q Consensus 346 ~~~-g~~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~----~~~e~l~ 419 (464)
+++ |+++. .+.+++|+|++++.... ....++...+ .++||.++||..|+..+.+++|++++. .+.++++
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~ 349 (359)
T 3pj0_A 275 NSCSGVKTVPEVPVSNMFHVYFENSAD----EIGAILTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLE 349 (359)
T ss_dssp HTSTTEEEESSSCSSSEEEEEESSCHH----HHHHHHHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHH
T ss_pred hhCCCceeeccCCcceEEEEEecCccc----hhHHHHHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHH
Confidence 987 88885 34445588888763210 1223455554 578999999988775556789999863 4789999
Q ss_pred HHHHHHHHH
Q 037587 420 VALQRIKVF 428 (464)
Q Consensus 420 ~~l~~l~~~ 428 (464)
+++++|.+.
T Consensus 350 ~~l~~l~~~ 358 (359)
T 3pj0_A 350 LVFRCLEKE 358 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998875
No 147
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=3.6e-28 Score=244.20 Aligned_cols=360 Identities=12% Similarity=0.059 Sum_probs=219.3
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
+.+.+..++|+. ++.+.+++.+..... . + ........|+.......+.+...+.+.+.++ +++++|++++
T Consensus 31 ~~~~~~~~~n~~-~~~v~~a~~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~----~~~~~v~~~s 100 (420)
T 3gbx_A 31 EHIELIASENYT-SPRVMQAQGSQLTNK-Y---A-EGYPGKRYYGGCEYVDVVEQLAIDRAKELFG----ADYANVQPHS 100 (420)
T ss_dssp HSEECCTTCCCC-CHHHHHHHTSGGGGC-C---C---------------CHHHHHHHHHHHHHHHT----CSEEECCCSS
T ss_pred cceeeeccCCCC-CHHHHHHHHHHHhcc-c---c-cCCCCccccCchHHHHHHHHHHHHHHHHHhC----CCCceeEecC
Confidence 347777777774 555666665532100 0 0 0000001222222233444433345554444 5667777777
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 117 GSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 117 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
| ++++..++.+++++||.|+++.|+|+.+. ...... .+...++++.+ .++.+|+++|++.+++. ++++
T Consensus 101 G-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-----~~~~ 172 (420)
T 3gbx_A 101 G-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-----KPKM 172 (420)
T ss_dssp H-HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-----CCSE
T ss_pred c-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-----CCeE
Confidence 7 78999999999999999999999998743 111111 03455566655 46778999999999762 5889
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC
Q 037587 193 VLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS 272 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S 272 (464)
|++++|+||+ ..+ +++|.++|+++|+++|+||+|....+... ..... .. ...+++.|+|
T Consensus 173 v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~--~~~~~---~~-----------~~di~~~s~s 231 (420)
T 3gbx_A 173 IIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAG--VYPNP---VP-----------HAHVVTTTTH 231 (420)
T ss_dssp EEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTT--SSCCS---TT-----------TSSEEEEESS
T ss_pred EEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecc--cCCcc---cc-----------cCCEEEeecc
Confidence 9999999974 444 78899999999999999999864322222 11111 11 2347899999
Q ss_pred cCCCCCccEEEEEEecC--HHHHHHHHHhccc---CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Q 037587 273 KDFSMPGFRVGMIYSNN--ERVVSAATKMSSF---GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV 347 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~--~~~~~~~~~~~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 347 (464)
|+++ |.+.||+++++ ..+.+.+...... ...+...+.++..++... ..+++++.++.+.++++++.+.|.+
T Consensus 232 K~~~--g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (420)
T 3gbx_A 232 KTLA--GPRGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNAKAMVEVFLN 307 (420)
T ss_dssp GGGC--SCSCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHh
Confidence 9984 55569999976 3555544443222 122333333333333211 1234677788888899999999998
Q ss_pred CCCeeecC-CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC-------CCCCCCCCCCeEEEEeec-----CC
Q 037587 348 AGIRCLKS-NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP-------GSSCHCNEPGWFRICFAN-----IT 414 (464)
Q Consensus 348 ~g~~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p-------g~~f~~~~~~~~Ris~~~-----~~ 414 (464)
.|+++.++ ..++++|+.++.... .. +.+..+++++||.+.| +..|+ ++.+||+++. .+
T Consensus 308 ~g~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~l~~~gi~v~~~~~~~~~~~~~~---~~~iRi~~~~~~~~~~~ 378 (420)
T 3gbx_A 308 RGYKVVSGGTENHLFLLDLVDKNL-----TG-KEADAALGRANITVNKNSVPNDPKSPFV---TSGIRIGSPAVTRRGFK 378 (420)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTC-----CH-HHHHHHHHHTTEECEEECCTTCSSCTTT---CSEEEEECHHHHHTTCC
T ss_pred cCCeeccCCCCCeEEEEEcCCCCC-----CH-HHHHHHHHHCCcEeccccCCCCccccCC---CcceEEecchhcccCCC
Confidence 89888653 445688888864211 11 2344555788999998 33332 3459999864 34
Q ss_pred HHHHHHHHHHHHHHHHhhCccccccccceeeeee
Q 037587 415 EETLQVALQRIKVFAQSCNPQMLLLQRRSIIGKW 448 (464)
Q Consensus 415 ~e~l~~~l~~l~~~l~~~~~~~~~~~~~~~~~~~ 448 (464)
++++++++++|++++++...+....++..+..+|
T Consensus 379 ~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 412 (420)
T 3gbx_A 379 EAEVKELAGWMCDVLDNINDEATIERVKAKVLDI 412 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHH
Confidence 7999999999999998876554444444444444
No 148
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=7.8e-28 Score=243.26 Aligned_cols=351 Identities=11% Similarity=0.036 Sum_probs=211.9
Q ss_pred CCCCCCCCceEEeeccc--cccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||++.+. |++. +|.+.+++.+.... .....|++ ....+|++++++++.
T Consensus 48 ~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~-----------~~~~~~~~-~~~~~l~~~la~~~~------ 109 (434)
T 3l44_A 48 YFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAEN-----------GVLYGTPT-ALEVKFAKMLKEAMP------ 109 (434)
T ss_dssp EEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHH-----------CSCCSSCC-HHHHHHHHHHHHHCT------
T ss_pred EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHh-----------CcCCCCCC-HHHHHHHHHHHHhCC------
Confidence 33344566789998774 5553 56677776664221 11123432 234566666666542
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcc------------
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFR------------ 170 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~------------ 170 (464)
.+++|++|+|+++++..+++++.. +++.|++.+|+|+++...+....|............++.
T Consensus 110 ---~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (434)
T 3l44_A 110 ---ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPF 186 (434)
T ss_dssp ---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECT
T ss_pred ---CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCc
Confidence 578999999999999999988754 678999999999887655443323322211111101110
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
-|+++|++.+++. ..+++ +++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+. . ....
T Consensus 187 ~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~--~--~~~~ 257 (434)
T 3l44_A 187 NNVETLKEALDKW---GHEVA-AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY--G--GAQD 257 (434)
T ss_dssp TCHHHHHHHHHHH---GGGEE-EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS--S--CHHH
T ss_pred ccHHHHHHHHHhC---CCCEE-EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc--c--HHHH
Confidence 1789999988753 12455 455556 55666655 8888999999999999999999999986 3222 1 1111
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-----hcccCCCChHHHHHHHHHcCCchhh
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-----MSSFGLVSSQTQYLLSRMLSDKKFT 323 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~l~~~~~~ 323 (464)
... .... +.||||.+| +|+|+||+++ ++.+.+.+.. ....++.+++++.++.++++..+-
T Consensus 258 ~~~---------~~~d---i~t~sK~~~-~G~~iG~~~~-~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~- 322 (434)
T 3l44_A 258 LLG---------VTPD---LTALGKVIG-GGLPIGAYGG-KKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ- 322 (434)
T ss_dssp HHT---------CCCS---EEEEEGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-
T ss_pred HcC---------CCCC---eeehhhhhc-CCcCeeeEEE-cHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-
Confidence 211 1122 458999999 8999999988 4555554443 122345778888888777652111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCe-eecCCccEEEEEecCccccc-------CChhHHHHHHHHHHHhcCeEEeCC
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKVAGIR-CLKSNAGLFCWVDMRHLLVS-------NTFEAEKELWKKIIFEVGLNISPG 395 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~g~f~~~~l~~~~~~-------~~~~~~~~l~~~ll~~~gI~v~pg 395 (464)
++..++.++..+..++.|.+.+..+++. ..++.+ .|+++.+...... .......+++..++ ++||.++|+
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~ 400 (434)
T 3l44_A 323 EGLYEKLDELGATLEKGILEQAAKHNIDITLNRLK-GALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPS 400 (434)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEET-TEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeec-cEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeec
Confidence 1123333332233333344444444443 333444 5777777432110 11112234666665 679999987
Q ss_pred CCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 396 SSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 396 ~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. .+++|+++. .+++++++++++|++++++.+
T Consensus 401 ~------~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~~ 431 (434)
T 3l44_A 401 K------YEAWFLTTE-HTKEDIEYTIEAVGRAFAALA 431 (434)
T ss_dssp T------TCCEECCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred C------CCcEEEecc-cCHHHHHHHHHHHHHHHHHHH
Confidence 4 246898765 599999999999999987653
No 149
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=5.3e-27 Score=238.28 Aligned_cols=360 Identities=9% Similarity=0.025 Sum_probs=220.3
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+ .+++. ++.+.+++.+.. .....|....+..+++.++++++.+..+.
T Consensus 54 ~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~~- 119 (451)
T 3oks_A 54 IVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQV-------------GDFTHTCFMVTPYEGYVAVCEQLNRLTPV- 119 (451)
T ss_dssp EEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHH-------------TTCSCCTTTTSCCHHHHHHHHHHHHHSSC-
T ss_pred EEEECCCCEEEEcCCCccccccCCCCHHHHHHHHHHH-------------HhcccccCCccCCHHHHHHHHHHHHhCCc-
Confidence 4444456678999987 55553 466666666542 22334554445678888888888776431
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCC-------------CcEEEEEecCCC---
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRP-------------GVEIVPIHCSSS--- 166 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~-------------g~~~~~v~~~~~--- 166 (464)
...++|++|+|+++++..+++.+.. .++.|++.+++|+++...+.... ...+..++....
T Consensus 120 --~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (451)
T 3oks_A 120 --RGDKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRD 197 (451)
T ss_dssp --CSSEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHH
T ss_pred --CCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccc
Confidence 1257899999999999999987653 45899999999987654322110 113444543310
Q ss_pred -----CCcc---cCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCC--CCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 167 -----NGFR---ITISALENAYQQAQTLNLKVKGVLITNPSNPLG--TAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 167 -----~~~~---~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG--~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+.-. -+++.+++.+++.. +++..++++++|.|++| ...+.+.+++|.++|++||+++|+||+|.++..
T Consensus 198 ~~~g~~~~~~~~~~~~~~~~~l~~~~--~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~ 275 (451)
T 3oks_A 198 AEFGKELATDGELAAKRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFAR 275 (451)
T ss_dssp GGGCTTTTTCHHHHHHHHHHHHHHHT--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred cccccccchhhHHHHHHHHHHHHhhc--CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence 0000 12444445554321 22334567778876666 344677799999999999999999999987543
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLS 314 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~ 314 (464)
.+. . ... .... .... +.||||.+| .|+|+||++++ +.+.+.+... ...+..++++|.++.
T Consensus 276 ~g~--~-~~~-~~~~---------~~pd---i~t~sK~l~-~G~~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~ 337 (451)
T 3oks_A 276 TGA--M-FAC-EHEG---------IDPD---LIVTAKGIA-GGLPLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAAL 337 (451)
T ss_dssp TSS--S-SGG-GGGT---------CCCS---EEEECGGGG-TTSSCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHH
T ss_pred ccc--c-hhh-hhcC---------CCCC---eeeehhhhh-CCcceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHH
Confidence 332 1 111 1111 1122 238999998 59999999984 4454444322 223457888998888
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecCCccEEEEEecCccc-ccCChhHHHHHHHHHHHhcCeEE
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLL-VSNTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~-~~~~~~~~~~l~~~ll~~~gI~v 392 (464)
++|+...- ++..++.++..+..++.+.+.+.+++ +...++. |.|+|+.+.... .........+++..++ ++||.+
T Consensus 338 aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v 414 (451)
T 3oks_A 338 ATIETIES-EGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIV 414 (451)
T ss_dssp HHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEEC
T ss_pred HHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEE
Confidence 88763211 12233333333333344444444443 3333444 458888874310 0011123345666665 679999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.|+..| .+++||+++. .+++++++++++|++++++
T Consensus 415 ~~~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 415 LSCGTY----GNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp EEECTT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred ecCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 998655 3589998876 6899999999999999864
No 150
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.96 E-value=8e-28 Score=242.45 Aligned_cols=326 Identities=12% Similarity=0.147 Sum_probs=221.6
Q ss_pred EeecccccccH-HHHHHHHHhhhhhHHhhhcccccccccccCCC-CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC
Q 037587 40 QMGLAENQLSF-DLLESWLASNQEAVELKRNGESLFRELALFQD-YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAG 117 (464)
Q Consensus 40 ~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G 117 (464)
+|+.+++++++ +.+.+++.+... . ..|++ ..+..++|++++++++ .++|++|+|
T Consensus 20 ~l~~~~p~~~~p~~~~~a~~~~~~-------------~-~~y~~~~~~~~~l~~~la~~~~----------~~~v~~~~g 75 (424)
T 2po3_A 20 PLLVGRPNRIDRARLYERLDRALD-------------S-QWLSNGGPLVREFEERVAGLAG----------VRHAVATCN 75 (424)
T ss_dssp CEETTCCCCCCHHHHHHHHHHHHH-------------H-TCCSSSCHHHHHHHHHHHHHHT----------SSEEEEESC
T ss_pred cccccCCCCCChHHHHHHHHHHHh-------------c-CCcccCCHHHHHHHHHHHHHhC----------CCeEEEeCC
Confidence 68888888864 555665554321 1 24776 5678999999999985 258999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN 197 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~ 197 (464)
+++++..++.++. +||+|+++.|+|+.+...+... |++++.+++++ ++|.+|++++++.+++ ++++|+++
T Consensus 76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~- 145 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWI-GLTPVFADIDP-DTGNLDPDQVAAAVTP------RTSAVVGV- 145 (424)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTSSBCHHHHGGGCCT------TEEEEEEE-
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHc-CCEEEEEecCC-CcCCcCHHHHHHhhCc------CCcEEEEE-
Confidence 9999999999985 7899999999999998888776 99999999875 4678999999887753 78888886
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc-ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCC
Q 037587 198 PSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS-GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFS 276 (464)
Q Consensus 198 P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g 276 (464)
||||.. .++++|+++|+++|+++|+||+|. ++.+.+. ++..+ .. +++.||||..+
T Consensus 146 --~~tG~~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-----~~~~~-------------~d-i~~~S~sk~K~ 201 (424)
T 2po3_A 146 --HLWGRP---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR-----PAGSL-------------GD-AEVFSFHATKA 201 (424)
T ss_dssp --CGGGCC---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-----ETTSS-------------SS-EEEEECCTTSS
T ss_pred --CCCCCc---CCHHHHHHHHHHcCCEEEEECccccCCeECCe-----ecccc-------------cC-EEEEeCCCCCC
Confidence 489987 467888899999999999999998 4444322 21111 22 78999996666
Q ss_pred CCccEEEEEEecCHHHHHHHHHhcccCC-----C-----C-hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 037587 277 MPGFRVGMIYSNNERVVSAATKMSSFGL-----V-----S-SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGL 345 (464)
Q Consensus 277 ~~GlRiG~l~~~~~~~~~~~~~~~~~~~-----~-----s-~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l 345 (464)
++|+|+||++++++.+.+.+........ . + .+.+.+++..+.. .+.+++..++.++.++++.+.|
T Consensus 202 l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L 277 (424)
T 2po3_A 202 VNAFEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHL 277 (424)
T ss_dssp SCCSSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh
Confidence 6778999999975666555554332210 0 0 1122222222221 2234555566666777888888
Q ss_pred HhC-CCeeec-CCcc----EEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCC--------------CCCe
Q 037587 346 KVA-GIRCLK-SNAG----LFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCN--------------EPGW 405 (464)
Q Consensus 346 ~~~-g~~~~~-~~~g----~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~--------------~~~~ 405 (464)
.++ |+.+.+ +.++ +++++.++...... ...++...+ .++||.+++. |... .+++
T Consensus 278 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l~~~L-~~~gI~v~~~--~~~~~~~~~~~~~~g~~~~~~~ 351 (424)
T 2po3_A 278 ADLPGVLVADHDRHGLNNHQYVIVEIDEATTGI---HRDLVMEVL-KAEGVHTRAY--FSPGCHELEPYRGQPHAPLPHT 351 (424)
T ss_dssp CSCTTEEECCGGGGSCCCCCCEEEEECHHHHSS---CHHHHHHHH-HHTTEECBCT--TCSCGGGSTTTTTSCCCCCHHH
T ss_pred ccCCCccccCCCCCCccccEEEEEEECCccchh---hHHHHHHHH-HHCCCceecc--cCCccccchhhhhcCCCCChhH
Confidence 876 777765 3332 23446665310000 122455544 6789999872 2210 0122
Q ss_pred -------EEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 406 -------FRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 406 -------~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+|+++.. .+++++++++++|++++++..
T Consensus 352 ~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~ 387 (424)
T 2po3_A 352 ERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRGR 387 (424)
T ss_dssp HHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 6666434 789999999999999887654
No 151
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.96 E-value=2.2e-27 Score=236.50 Aligned_cols=298 Identities=11% Similarity=0.116 Sum_probs=208.9
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEE
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEI 158 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~ 158 (464)
|.+..+..+++++++++++ .+++++|+|+++++..++.++ +++||+|+++.|+|+.+...+... |+++
T Consensus 35 ~~~~~~~~~l~~~la~~~~----------~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~ 103 (393)
T 1mdo_A 35 ITTGPKNQELEAAFCRLTG----------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLL-GANP 103 (393)
T ss_dssp CSSSHHHHHHHHHHHHHHC----------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEE
T ss_pred cCCChHHHHHHHHHHHHhC----------CCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHHHHHHHC-CCEE
Confidence 3344567899999999985 247999999999999999999 899999999999999998888776 9999
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc-ccC
Q 037587 159 VPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT-VFD 237 (464)
Q Consensus 159 ~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~-~~~ 237 (464)
+.+++++ +++.+|++++++.+++ ++++|+++ ||||...+ +++|.++|+++|+++|+||+|+.. .+.
T Consensus 104 ~~v~~~~-~~~~~d~~~l~~~l~~------~~~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~ 170 (393)
T 1mdo_A 104 VMVDVDR-DTLMVTPEHIEAAITP------QTKAIIPV---HYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYK 170 (393)
T ss_dssp EEECBCT-TTCCBCHHHHHHHCCT------TEEEECCB---CGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEET
T ss_pred EEEeccC-CcCCCCHHHHHHhcCC------CceEEEEe---CCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeEC
Confidence 9999875 3578999999988754 78888776 48999865 778888899999999999999852 232
Q ss_pred CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC--------------
Q 037587 238 SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG-------------- 303 (464)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~-------------- 303 (464)
+. . + . . .++++.||||..+++|.|+||++++++.+.+.+......+
T Consensus 171 ~~-----~---~-~---------~--~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T 1mdo_A 171 GR-----H---I-G---------A--RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRA 230 (393)
T ss_dssp TE-----E---T-T---------S--SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC----------
T ss_pred Ce-----e---c-C---------C--CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccchhhhccccc
Confidence 11 1 1 0 1 5678899994434455699999997566655554432211
Q ss_pred ------------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-C-----CccEEEEEec
Q 037587 304 ------------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-S-----NAGLFCWVDM 365 (464)
Q Consensus 304 ------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~-----~~g~f~~~~l 365 (464)
..+.+...++...+.. +++..+..++.++++.+.|.+.++++.. + .+++++|+.+
T Consensus 231 ~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (393)
T 1mdo_A 231 PQAEVLAPGYKYNLPDLNAAIALAQLQK-------LDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRV 303 (393)
T ss_dssp -CCEESSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEEC
T ss_pred ccccccccCccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEe
Confidence 1233333333333322 3334444455677788888887766542 2 3456789998
Q ss_pred CcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC--------------CC-----CCCeEEEEeec-CCHHHHHHHHHHH
Q 037587 366 RHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH--------------CN-----EPGWFRICFAN-ITEETLQVALQRI 425 (464)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~--------------~~-----~~~~~Ris~~~-~~~e~l~~~l~~l 425 (464)
+...... ...++...+. ++||.+++|..+. .. ..+++||+++. .++++++.++++|
T Consensus 304 ~~~~~~~---~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 379 (393)
T 1mdo_A 304 DEARCGI---TRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITAL 379 (393)
T ss_dssp CHHHHSS---CHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHH
T ss_pred ccccccc---CHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence 7310000 1224666664 6799999886541 00 13479999985 6899999999999
Q ss_pred HHHHHhh
Q 037587 426 KVFAQSC 432 (464)
Q Consensus 426 ~~~l~~~ 432 (464)
+++++.+
T Consensus 380 ~~~~~~~ 386 (393)
T 1mdo_A 380 HQIAGQG 386 (393)
T ss_dssp HHHHC--
T ss_pred HHHHhcC
Confidence 9987654
No 152
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.96 E-value=2.9e-28 Score=239.92 Aligned_cols=283 Identities=14% Similarity=0.162 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh-HHHHHHHHHHhcCC---CCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS-TAANETLMFCLADP---GDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~-~~al~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.++++.+++++ | .. ++++|++|+|+ ++++..++.+++.+ ||.|+++.++|... ..+... | +++.++
T Consensus 51 ~~l~~~la~~~----g--~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~-g-~~~~v~ 120 (360)
T 1w23_A 51 EQAQNLLRELL----Q--IP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLL-G-ETHIAA 120 (360)
T ss_dssp HHHHHHHHHHH----T--CC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTT-S-EEEEEE
T ss_pred HHHHHHHHHHh----C--CC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHh-C-CeEEee
Confidence 34555555555 3 21 35799999999 99999999998865 56777777777532 334545 9 999999
Q ss_pred cCCCCCcccCHHHHHH-HHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 163 CSSSNGFRITISALEN-AYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~-~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+++++++ +|++++++ .+. +++++|++++|+||||.+++ ++ ++++|+++|+||+|+.+ ..
T Consensus 121 ~~~~~~~-~d~~~l~~~~i~------~~~k~v~~~~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~---~~-- 180 (360)
T 1w23_A 121 STKANSY-QSIPDFSEFQLN------ENDAYLHITSNNTIYGTQYQ--NF------PEINHAPLIADMSSDIL---SR-- 180 (360)
T ss_dssp ECGGGTS-CSCCCGGGCCCC------TTEEEEEEESEETTTTEECS--SC------CCCCSSCEEEECTTTTT---SS--
T ss_pred cccccCc-CCccchHhhccC------CCCCEEEEeCCCCCcceecc--cc------cccCCceEEEechhhcC---CC--
Confidence 8753333 68888877 653 37999999999999999987 32 23799999999999853 12
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--------------ccCCCCh
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--------------SFGLVSS 307 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--------------~~~~~s~ 307 (464)
+ .++.. . .+++.|+||.+|++| +||++++++ +.+.+.... .+.+.+.
T Consensus 181 ~-~~~~~-------------~--di~~~s~sK~~~~~G--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (360)
T 1w23_A 181 P-LKVNQ-------------F--GMIYAGAQKNLGPSG--VTVVIVKKD-LLNTKVEQVPTMLQYATHIKSDSLYNTPPT 241 (360)
T ss_dssp C-CCGGG-------------C--SEEEEETTTTTSCTT--CEEEEEEHH-HHCSCCTTCCGGGCHHHHHHTTTCSSCCCH
T ss_pred C-cCccc-------------C--CEEEEEcccccCCCC--cEEEEEcHH-HHhhcccCCcchhhhhhhhhccCCCCCCCH
Confidence 1 12111 1 267899999999777 899999654 333222211 1133455
Q ss_pred HHHHHHHHHcCCchhhHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eee--cC-CccEEEEEecCcccccCChhHHHHHH
Q 037587 308 QTQYLLSRMLSDKKFTCN-YMKENRKRLRKRKEMLVSGLKVAG-I-RCL--KS-NAGLFCWVDMRHLLVSNTFEAEKELW 381 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g-~-~~~--~~-~~g~f~~~~l~~~~~~~~~~~~~~l~ 381 (464)
..+.++..+++... .. ++++.++.++++++++.+.|++++ + .+. +. .+++++|++++.. ....+++
T Consensus 242 ~~~~~~~~al~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 313 (360)
T 1w23_A 242 FSIYMLRNVLDWIK--DLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------ELNQQFL 313 (360)
T ss_dssp HHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH------HHHHHHH
T ss_pred HHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC------ccHHHHH
Confidence 56666666554211 11 467778888899999999999875 5 543 22 3566899998742 1223466
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 382 KKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 382 ~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..+ .++||.++||..+ ++++||+++. .+++++++++++|++++++
T Consensus 314 ~~l-~~~gi~~~~~~~~----~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 314 AKA-KEQGFVGLNGHRS----VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp HHH-HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHCCeeeecCCCC----CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 665 5689999998754 5789999986 5899999999999998765
No 153
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=2e-27 Score=241.21 Aligned_cols=353 Identities=12% Similarity=0.068 Sum_probs=214.7
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+ .++.+.+++.+.. .....|....+..+.++++++++.+..+
T Consensus 37 ~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~-- 101 (448)
T 3dod_A 37 KVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQL-------------GKIAHSTLLGMTNVPATQLAETLIDISP-- 101 (448)
T ss_dssp EEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHH-------------TTCSCCCCSSSEEHHHHHHHHHHHHHSC--
T ss_pred EEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHH-------------HhccCccccccCCHHHHHHHHHHHHhCC--
Confidence 4444456678999876 4444 3466666666542 2222333344567888888888887653
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC----CC----CeEEEcCCCCCChhhhcccCCCc------------EEEEEecC
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD----PG----DAFLLPTPYYPGFDRDLKWRPGV------------EIVPIHCS 164 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~----~g----d~Vlv~~p~y~~~~~~~~~~~g~------------~~~~v~~~ 164 (464)
...++|++|+|+++++..+++++.. +| |.|++.+|+|+++........|. .+..++.+
T Consensus 102 --~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (448)
T 3dod_A 102 --KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP 179 (448)
T ss_dssp --TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC
T ss_pred --CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC
Confidence 3567999999999999999998765 44 99999999998765443322121 12233322
Q ss_pred CCCCccc-----------CHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 165 SSNGFRI-----------TISALENAYQQAQTLNLKVKGVLITNPS-NPLGT-AMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 165 ~~~~~~~-----------d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
..|.. |+++|++.++.. ..++++|++..++ |++|. +.+.+.+++|.++|++||+++|+||+|
T Consensus 180 --~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~ 254 (448)
T 3dod_A 180 --YVYRSESGDPDECRDQCLRELAQLLEEH---HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVA 254 (448)
T ss_dssp --CCTTSSSCCHHHHHHHHHHHHHHHHHHH---GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTT
T ss_pred --ccccCCccchhhhhHHHHHHHHHHHHhC---CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccc
Confidence 22222 378888888631 1256665555445 88885 567788999999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH-------h--cc
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK-------M--SS 301 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~-------~--~~ 301 (464)
.++...+. .+ .. .... .... +.||||+++ +| +|+||++++ +.+.+.+.. . ..
T Consensus 255 ~g~g~~g~--~~-a~-~~~~---------~~~d---i~t~sK~l~-~G~~~ig~v~~~-~~~~~~~~~~~~~~~~~~~~~ 316 (448)
T 3dod_A 255 TGFGRTGK--MF-AC-EHEN---------VQPD---LMAAGKGIT-GGYLPIAVTFAT-EDIYKAFYDDYENLKTFFHGH 316 (448)
T ss_dssp TTTTTTSS--SS-GG-GGGT---------CCCS---EEEECGGGG-TTSSCCEEEEEE-HHHHHTTCSCGGGCCCCCCCC
T ss_pred cCCCcccc--hh-hh-hhcC---------CCCC---EEEeccccc-CCcCceEEEEEC-HHHHHHhhhccccCCcccccC
Confidence 97543333 21 11 1111 1122 347999998 69 599999994 445554433 1 12
Q ss_pred cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCC-eeecCCccEEEEEecCcccccCC-h--h--
Q 037587 302 FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGI-RCLKSNAGLFCWVDMRHLLVSNT-F--E-- 375 (464)
Q Consensus 302 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~g~f~~~~l~~~~~~~~-~--~-- 375 (464)
.+..+++++.++.++|+..+- ++..++.++..+..++.+.+ +..++. ...++. |.|+|+.++....... . .
T Consensus 317 t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 393 (448)
T 3dod_A 317 SYTGNQLGCAVALENLALFES-ENIVEQVAEKSKKLHFLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRR 393 (448)
T ss_dssp TTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGC
T ss_pred CCCcCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhH
Confidence 234678888888888763211 12233444444444444555 544432 223333 4588888865322110 0 0
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
...+++..++ ++||.+.|+ .+++||+++. .+++++++++++|++++++.
T Consensus 394 ~~~~~~~~l~-~~Gv~~~~~-------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 394 IGYKVSLKMR-ELGMLTRPL-------GDVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp HHHHHHHHHH-HTTEECCEE-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCcEEecc-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0235667776 569999886 2689997664 68999999999999998764
No 154
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.95 E-value=3.1e-27 Score=238.34 Aligned_cols=344 Identities=11% Similarity=0.054 Sum_probs=213.1
Q ss_pred CCCCCCCCceEEeeccc--cccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||++.+. |++. ++.+.+++.+.. .....|.. ..+++.++++++.+.++
T Consensus 45 ~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~-------------~~~~~~~~---~~~~~~~la~~l~~~~~-- 106 (427)
T 3fq8_A 45 YAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAM-------------EKGTSFGA---PCALENVLAEMVNDAVP-- 106 (427)
T ss_dssp EEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHH-------------TTCSCCSS---CCHHHHHHHHHHHHHST--
T ss_pred EEEECCCCEEEECCCchhhhccCCCCHHHHHHHHHHH-------------HhCCCcCC---CCHHHHHHHHHHHHhCC--
Confidence 33344556789999875 5553 566777666542 12222322 35677777777776543
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCcE-------------------EEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGVE-------------------IVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~~-------------------~~~v~~ 163 (464)
.+++|++|+|+++++..+++... ..++.|++.+|+|+++...+....|.. ++.++.
T Consensus 107 ---~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (427)
T 3fq8_A 107 ---SIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY 183 (427)
T ss_dssp ---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET
T ss_pred ---CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC
Confidence 57899999999999999995431 235789999999987654433221221 222222
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC-HHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT-HQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s-~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
+ |+++|++.+++. ..++++|+++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+. .
T Consensus 184 ~-------d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~--~ 250 (427)
T 3fq8_A 184 N-------DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY--G 250 (427)
T ss_dssp T-------CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT--T
T ss_pred C-------CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc--c
Confidence 1 789999988651 225666666555777887665 555999999999999999999999975 3222 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----cccCCCChHHHHHHHHHc
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----SSFGLVSSQTQYLLSRML 317 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l 317 (464)
....... .... +.||||++| +|+|+||+++ ++.+.+.+... ...++.+++++.++.+++
T Consensus 251 --~~~~~~~---------~~~d---i~t~sK~~~-~G~~~G~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal 314 (427)
T 3fq8_A 251 --GVQEKFG---------VTPD---LTTLGKIIG-GGLPVGAYGG-KREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTL 314 (427)
T ss_dssp --HHHHHTT---------CCCS---EEEECGGGG-TTSSCEEEEE-CHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred --hhhHhcC---------CCCC---hhhhhhhhh-CCcceEEEEE-cHHHHHhhccCCCccccCCCCcCHHHHHHHHHHH
Confidence 1111111 1112 459999999 8999999998 45555544331 122345778888877776
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccccc-------CChhHHHHHHHHHHHhcCe
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVS-------NTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~-------~~~~~~~~l~~~ll~~~gI 390 (464)
+..+. ++..++.++..+..++.+.+.+...++.......|+|+|++++..... .......+++..++ ++||
T Consensus 315 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi 392 (427)
T 3fq8_A 315 ELLRQ-PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGI 392 (427)
T ss_dssp HHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTE
T ss_pred HHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCc
Confidence 52110 112233333333333344444444454433444567899998653111 11112335666665 6799
Q ss_pred EEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 391 NISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 391 ~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
.++|+.. ..+|+++. .+++++++++++|++++++
T Consensus 393 ~v~~~~~------~r~~~~~~-~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 393 YLAPSQF------EAGFTSLA-HTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp ECCSSTT------SCEECCTT-CCHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC------CCEEeeCc-CCHHHHHHHHHHHHHHHHh
Confidence 9998752 24555544 5899999999999999875
No 155
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.95 E-value=3.8e-27 Score=237.89 Aligned_cols=345 Identities=13% Similarity=0.092 Sum_probs=215.4
Q ss_pred CCCCCCCCceEEeeccc--cccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||++.+. |++. +|.+.+++.+.... .....|+ .....+|++++++++.
T Consensus 46 ~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~-----------~~~~~~~-~~~~~~l~~~la~~~~------ 107 (429)
T 3k28_A 46 KVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAER-----------GTSFGAP-TEIENKLAKLVIERVP------ 107 (429)
T ss_dssp EEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHH-----------CSCCSSC-CHHHHHHHHHHHHHST------
T ss_pred EEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhh-----------CcCcCCC-CHHHHHHHHHHHHhCC------
Confidence 33344566789999874 5553 56777776664221 1112233 2344677777777652
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcc------------
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFR------------ 170 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~------------ 170 (464)
.+++|++|+|+++++..+++.+.. +++.|++.+|+|+++...+....|..+..+......++.
T Consensus 108 ---~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (429)
T 3k28_A 108 ---SIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAY 184 (429)
T ss_dssp ---TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEET
T ss_pred ---CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCC
Confidence 468999999999999999987654 568999999999876554433323322222221111111
Q ss_pred cCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhh
Q 037587 171 ITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIME 248 (464)
Q Consensus 171 ~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~ 248 (464)
-|++++++.+++. ..++++ ++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+. .....
T Consensus 185 ~d~~~le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~----~~~~~ 255 (429)
T 3k28_A 185 NDLESVKYAFEQF---GDDIAC-VIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY----NCGQG 255 (429)
T ss_dssp TCHHHHHHHHHHH---GGGEEE-EEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST----THHHH
T ss_pred CCHHHHHHHHHhC---CCCEEE-EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc----chHHH
Confidence 1789999988752 124554 55556 55566555 6778999999999999999999999875 3222 11111
Q ss_pred hhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----cccCCCChHHHHHHHHHcCCchhh
Q 037587 249 AVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----SSFGLVSSQTQYLLSRMLSDKKFT 323 (464)
Q Consensus 249 l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~ 323 (464)
... .... +.||||++| +|+|+||++++ +.+.+.+... ...++.+++++.++.++++..+
T Consensus 256 ~~~---------~~~d---i~t~sK~~~-~G~~iG~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-- 319 (429)
T 3k28_A 256 YYG---------VTPD---LTCLGKVIG-GGLPVGAYGGK-AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-- 319 (429)
T ss_dssp HHT---------CCCS---EEEECGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC--
T ss_pred HhC---------CCCc---eehhhhhhc-CCCCeEEEEEc-HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH--
Confidence 211 1122 348999998 69999999994 4454444331 2234578889999888887542
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh----CCC-eeecCCccEEEEEecCcccc-------cCChhHHHHHHHHHHHhcCeE
Q 037587 324 CNYMKENRKRLRKRKEMLVSGLKV----AGI-RCLKSNAGLFCWVDMRHLLV-------SNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 324 ~~~~~~~~~~~~~~~~~l~~~l~~----~g~-~~~~~~~g~f~~~~l~~~~~-------~~~~~~~~~l~~~ll~~~gI~ 391 (464)
++.++.++++++++.+.|++ ++. ...++.+ .|+++.+..... ........+++..++ ++||.
T Consensus 320 ----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~ 393 (429)
T 3k28_A 320 ----PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAG-SMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVF 393 (429)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEE
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeec-cEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeE
Confidence 23344444555555555544 333 3344445 477777743210 011122345666665 67999
Q ss_pred EeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 392 ISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 392 v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++|+. .+++|+++. .+++++++++++|++++++.
T Consensus 394 v~~~~------~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 394 LPPSQ------FEGLFLSTV-HSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp CCSST------TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred EecCC------CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence 99873 346888765 59999999999999998765
No 156
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.95 E-value=5.4e-28 Score=238.40 Aligned_cols=288 Identities=14% Similarity=0.125 Sum_probs=201.8
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCC-c-EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPN-K-LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~-~-i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v 161 (464)
..++++++.+.+.+.+| ++++ + +++|+|+++++..++.+++++||+|+++.+.+... ...++.. | +++.+
T Consensus 47 ~~~~~~~~~~~la~~~g----~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~-g-~~~~v 120 (362)
T 2c0r_A 47 YEAVHNEAQARLLALLG----NPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLI-G-DTHVA 120 (362)
T ss_dssp HHHHHHHHHHHHHHHTT----CCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHH-S-CEEEE
T ss_pred HHHHHHHHHHHHHHHhC----CCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHh-C-CeEEE
Confidence 35567777777777665 4553 6 56789999999999999999999999887764332 2444555 8 89888
Q ss_pred ecCCC--CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 162 HCSSS--NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 162 ~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
+++.+ .++.+|+++++ +. +++++|++++|+||||.+++ ++++| +|+++|+|++|... ..
T Consensus 121 ~~~~~~~~~~~~~~~~~~--i~------~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~---~~ 181 (362)
T 2c0r_A 121 ASSEASNYMTLPKLQEIQ--LQ------DNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDIL---SR 181 (362)
T ss_dssp EECGGGTTCSCCCGGGCC--CC------TTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTT---SS
T ss_pred ecccccccccCCCHHHcc--cC------CCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhcc---CC
Confidence 87632 22334655543 32 37999999999999999755 34444 79999999999842 22
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH--------------hcccCCC
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK--------------MSSFGLV 305 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~--------------~~~~~~~ 305 (464)
+ .+ + . +..+++.|+||++|++| +||++++++.+ +.+.. ....+++
T Consensus 182 --~-~~---~-~-----------~~d~~~~s~~K~~g~~G--~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~t~ 240 (362)
T 2c0r_A 182 --P-FD---L-N-----------QFGLVYAGAQKNLGPSG--VTVVIVREDLV-AESPKHLPTMLRYDTYVKNNSLYNTP 240 (362)
T ss_dssp --C-CC---G-G-----------GCSEEEEETTTTTCCSS--CEEEEEEGGGS-SSCCTTSCGGGCHHHHHHTTTCSSCC
T ss_pred --c-cc---h-h-----------HCcEEEEeccccccCcC--cEEEEEcHHHH-hhccccCchHHhHHHHhhccCcCCCc
Confidence 1 12 1 1 11367789999999888 89999865432 22211 0223456
Q ss_pred ChHHHHHHHHHcCCchhhHH-HHHHHHHHHHHHHHHHHHHHHhCC-C-eeecC---CccEEEEEecCcccccCChhHHHH
Q 037587 306 SSQTQYLLSRMLSDKKFTCN-YMKENRKRLRKRKEMLVSGLKVAG-I-RCLKS---NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 306 s~~~q~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g-~-~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+.+.|.++..+++... .. .+++.++.++++++++.+.|+++| + ++..+ .++.++++.++.. ....+
T Consensus 241 ~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 312 (362)
T 2c0r_A 241 PSFGIYMVNEVLKWIE--ERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE------ELEKE 312 (362)
T ss_dssp CHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH------HHHHH
T ss_pred hHHHHHHHHHHHHHHH--HhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc------chHHH
Confidence 7788888887776321 11 467788889999999999999987 6 66421 2344678888632 12335
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++..| .++||.+.||..| .+++|||++. .++++++++++.|+++++++
T Consensus 313 ~~~~L-~~~gi~~~~g~~~----~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 313 FVKAS-EQEGFVGLKGHRS----VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp HHHHH-HHTTEESCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHCCCeeccCCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 66665 5779999888765 3579999986 57999999999999998765
No 157
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.95 E-value=1.7e-26 Score=234.44 Aligned_cols=295 Identities=16% Similarity=0.186 Sum_probs=202.0
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~ 153 (464)
..|. ..|.+ +++++++++.+.+| . +++++++|+++++..++. ++++||.|++++|+|+.+... +...
T Consensus 125 ~~Y~-~~g~~-~~~~l~~~la~~~g----~--~~~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~ 195 (464)
T 1ibj_A 125 YDYT-RSGNP-TRDALESLLAKLDK----A--DRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRS 195 (464)
T ss_dssp CSBT-TTCCH-HHHHHHHHHHHHHT----C--SEEEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGG
T ss_pred cccc-CCCCH-HHHHHHHHHHHHhC----C--CeEEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHc
Confidence 3465 34544 78888888887765 2 377777888899998875 789999999999999988653 4445
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|++++.++++ |++++++++.+ ++++|++++|+||||.+++ +++|+++|+++|+++|+||+|..
T Consensus 196 -G~~v~~v~~~-------d~~~l~~~i~~------~tk~v~l~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 196 -GVVVKRVNTT-------KLDEVAAAIGP------QTKLVWLESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp -TCEEEEECTT-------SHHHHHHHCCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTC
T ss_pred -CCEEEEeCCC-------CHHHHHHHhcc------CceEEEEeCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcc
Confidence 9999998863 78899887753 7999999999999999985 78889999999999999999974
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHhcc--cCCCChHHH
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKMSS--FGLVSSQTQ 310 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~~~--~~~~s~~~q 310 (464)
..+ +.. ..+ ++++++.|+||.++. +|+|+||++++++.+.+.+..... .+.++++.|
T Consensus 259 g~~------~~~-~~~-------------~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~ 318 (464)
T 1ibj_A 259 PVL------SRP-LEL-------------GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDC 318 (464)
T ss_dssp TTT------CCG-GGT-------------TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHH
T ss_pred ccc------CCh-hhc-------------CCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHH
Confidence 211 111 111 567889999999864 489999999976666665554432 234678888
Q ss_pred HHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH----------HHHHhC-CCeeecCC---ccEEEEEecCcccccCChhH
Q 037587 311 YLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV----------SGLKVA-GIRCLKSN---AGLFCWVDMRHLLVSNTFEA 376 (464)
Q Consensus 311 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----------~~l~~~-g~~~~~~~---~g~f~~~~l~~~~~~~~~~~ 376 (464)
.++...++.... .++..........+++. +.|+++ ++.+.+++ .|.+++++++. ...
T Consensus 319 ~a~~~al~~~~~---r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~------~~~ 389 (464)
T 1ibj_A 319 WLCLRGIKTMAL---RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS------VAL 389 (464)
T ss_dssp HHHHHHHTTHHH---HHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC------HHH
T ss_pred HHHHhchhhHHH---HHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC------HHH
Confidence 888888775432 12222222222222222 122222 34444443 23478888742 112
Q ss_pred HHHHHHHHHHhcCeEEeCCC------------CCCC---------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 377 EKELWKKIIFEVGLNISPGS------------SCHC---------NEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~------------~f~~---------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
...++..+ +..||.+++|. .+.. ..++++||+++. |++++++++|++++++
T Consensus 390 ~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 390 SKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFKT 461 (464)
T ss_dssp HHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHHS
T ss_pred HHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHhh
Confidence 22344444 35799998885 1211 125789999994 8899999999998864
No 158
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=1.1e-27 Score=244.86 Aligned_cols=302 Identities=15% Similarity=0.122 Sum_probs=218.6
Q ss_pred CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh----cCCCC-----eEEEcCCCCCChhhhcccC
Q 037587 83 YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL----ADPGD-----AFLLPTPYYPGFDRDLKWR 153 (464)
Q Consensus 83 ~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l----~~~gd-----~Vlv~~p~y~~~~~~~~~~ 153 (464)
..|..++++++++++.+.+| ++. .+++++|+++++..++.++ .++|| +|+++.|+|+.+...+...
T Consensus 102 ~~g~~~l~~~l~~~la~~~g----~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTG----MDA-ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHT----CSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHC----CCc-eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 44667888888888888776 332 4668899999999865554 35787 9999999999888888776
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
|++++.+++++ ++.+|+++|++.+.+ ++++|++++| ||||.+. +++++|+++|+++|+++|+||+|..
T Consensus 177 -G~~vv~v~~~~--~~~~d~~~L~~~i~~------~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~ 244 (474)
T 1wyu_B 177 -GYQVREIPSGP--EGEVDLEALKRELGP------HVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLN 244 (474)
T ss_dssp -TCEEEEECBCT--TSSBCHHHHHHHCST------TEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred -CCEEEEecCCC--CCCcCHHHHHHhhCC------CceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhh
Confidence 99999999863 578999999998854 7899999998 6899873 4688999999999999999999976
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-c---cEEEEEEecCHHHHHHHH-Hh---------
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-G---FRVGMIYSNNERVVSAAT-KM--------- 299 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-G---lRiG~l~~~~~~~~~~~~-~~--------- 299 (464)
..++ . .+...+ +..+++.|+||+|+.+ | +|+||++++++. .+.+. ..
T Consensus 245 ~~~g-~----~~~~~~-------------g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l-~~~l~~~~~~~~g~~~~ 305 (474)
T 1wyu_B 245 AIMG-W----ARPGDM-------------GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL-APYLPVPLVERGEEGFY 305 (474)
T ss_dssp GTTT-T----CCHHHH-------------TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG-GGGCCSCEEEECSSCEE
T ss_pred hhcc-C----CCcccC-------------CCcEEEEeCccccccCCCCCCCCeEEEEEcHHH-HHhCCCCeeeccCCeeE
Confidence 5432 1 122222 3457788999999766 4 699999996643 33222 00
Q ss_pred ------------cccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEE-EEEecC
Q 037587 300 ------------SSFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLF-CWVDMR 366 (464)
Q Consensus 300 ------------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f-~~~~l~ 366 (464)
.. .+.+.+.+.++..++.... .+.+++..+.+.++++++.+.|++.|+++..+...+. +|++++
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~aa~~~l~~~g--~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 382 (474)
T 1wyu_B 306 LDFDRPKSIGRVRS-FYGNFLALVRAWAYIRTLG--LEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPP 382 (474)
T ss_dssp EECCCTTCCCCSSS-TTSCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCS
T ss_pred ecccCcccCccccc-CcCcHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcC
Confidence 11 1245566776666665322 3457777888888999999999988887633332221 566663
Q ss_pred cccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 367 HLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.. ....+++..|+ ++||.+ |+..|+....+++||+++. .+++++++++++|++++++
T Consensus 383 ~~------~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 383 EG------FRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp TT------CCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred CC------CCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 11 11235777776 559985 6666643346789999986 5799999999999999876
No 159
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.95 E-value=1.2e-26 Score=236.83 Aligned_cols=322 Identities=15% Similarity=0.223 Sum_probs=215.9
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCe---EEEcCCCCCChhhhcc
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD----PGDA---FLLPTPYYPGFDRDLK 151 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~---Vlv~~p~y~~~~~~~~ 151 (464)
.|.+..+..+|+++++++++ .++|++|+|+++++..++.+++. +||. |+++.+.|..+...+.
T Consensus 71 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~ 140 (467)
T 1ax4_A 71 AYAGSRNYYDLKDKAKELFN----------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVE 140 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHH
T ss_pred ccccCccHHHHHHHHHHHcC----------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHh
Confidence 57666678999999999984 26899999999999999999988 9998 9998777666666666
Q ss_pred cCCCcEEEEEecCC----C----CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhhCC
Q 037587 152 WRPGVEIVPIHCSS----S----NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 152 ~~~g~~~~~v~~~~----~----~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~~~ 222 (464)
.. |.+++.++.+. . .++.+|+++|++++++.. ..++++|++++||||| |.+++.+++++|+++|++||
T Consensus 141 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~--~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~g 217 (467)
T 1ax4_A 141 LN-GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG--ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217 (467)
T ss_dssp HT-TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC--GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHT
T ss_pred cc-CCceecccccccccccccCCcccccCHHHHHHHHHhcC--CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcC
Confidence 66 88888776431 0 134689999999997521 1268999999999999 89999999999999999999
Q ss_pred eEEEEeccccc--c--------ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecCH-
Q 037587 223 IHIVSDEIYSG--T--------VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNNE- 290 (464)
Q Consensus 223 ~~lI~Deay~~--~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~~- 290 (464)
+++|+||++.. . .+.+ .++..+.+++. ...+ +++.|+||.+|++ | ||++++++
T Consensus 218 i~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~ 282 (467)
T 1ax4_A 218 IFVVMDSARFCENAYFIKARDPKYKN-----ATIKEVIFDMY-----KYAD--ALTMSAKKDPLLNIG---GLVAIRDNE 282 (467)
T ss_dssp CCEEEECTTHHHHHHHHHHHCGGGTT-----CCHHHHHHHHG-----GGCS--EEEEETTSTTCCSSC---EEEEESSCH
T ss_pred CEEEEEchhhhhcchhccccccccCC-----Cchhhhhhhhc-----cccc--eEEEeccccCCCCcc---eEEEeCCHH
Confidence 99999998642 1 1211 12222221000 0012 4568999999876 5 77877633
Q ss_pred HHHHHHHHhc-------ccCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEE
Q 037587 291 RVVSAATKMS-------SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWV 363 (464)
Q Consensus 291 ~~~~~~~~~~-------~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~ 363 (464)
.+.+.+.... .+...+...+.++...+....- .+.+++ ..++++.+.+.|.+.|+++..+.+|+++|+
T Consensus 283 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~----~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 357 (467)
T 1ax4_A 283 EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE-EEYLHY----RIGQVKYLGDRLREAGIPIQYPTGGHAVFV 357 (467)
T ss_dssp HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC-HHHHHH----HHHHHHHHHHHHHHTTCCBCSSCCSSEEEE
T ss_pred HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh-hhHHHH----HHHHHHHHHHHHHhCCCCcccCCCceEEEE
Confidence 4444333221 1222333333333323321100 112222 224557788888777888877788899999
Q ss_pred ecCcc---cccCChhHHHHHHHHHHHhcCeEEeC-CCCC-CC---------CCCCeEEEEeec--CCHHHHHHHHHHHHH
Q 037587 364 DMRHL---LVSNTFEAEKELWKKIIFEVGLNISP-GSSC-HC---------NEPGWFRICFAN--ITEETLQVALQRIKV 427 (464)
Q Consensus 364 ~l~~~---~~~~~~~~~~~l~~~ll~~~gI~v~p-g~~f-~~---------~~~~~~Ris~~~--~~~e~l~~~l~~l~~ 427 (464)
++... ..... ....+++..|+.++||.+.| |..| +. ...+++||+++. .+++++++++++|++
T Consensus 358 ~~~~~~~~~~~~~-~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 436 (467)
T 1ax4_A 358 DCKKLVPQIPGDQ-FPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIG 436 (467)
T ss_dssp ESTTTCTTSCGGG-CHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHT
T ss_pred ehhhhccccccCC-CCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHH
Confidence 94221 00001 12346777775788999999 5431 11 113789999983 689999999999999
Q ss_pred HHHhhCc
Q 037587 428 FAQSCNP 434 (464)
Q Consensus 428 ~l~~~~~ 434 (464)
++++.+.
T Consensus 437 ~~~~~~~ 443 (467)
T 1ax4_A 437 LKEKFAT 443 (467)
T ss_dssp THHHHTT
T ss_pred HHHhhhc
Confidence 9987653
No 160
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=4e-27 Score=243.21 Aligned_cols=310 Identities=13% Similarity=0.136 Sum_probs=222.0
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------CeEEEcCCCCCChhhh
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKL--VLTAGSTAANETLMFCLADPG--------DAFLLPTPYYPGFDRD 149 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i--~it~G~~~al~~~~~~l~~~g--------d~Vlv~~p~y~~~~~~ 149 (464)
|..+.+..++++.+++++.+.+| .+.+++++ ++|+|+++++..++.++..+| |+|+++.|+|..+...
T Consensus 131 ~~~~p~~~~le~~l~~~la~~~g--~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~ 208 (514)
T 3mad_A 131 PDLWPSTAKFEAEVVAMTAHMLG--GDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA 208 (514)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTT--GGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHcC--CCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH
Confidence 33334556788888888877766 22334788 999999999999999998776 9999999999999988
Q ss_pred cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 150 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+... |++++.+++++ ++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||
T Consensus 209 ~~~~-G~~v~~v~~~~--~~~~d~~~Le~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 209 AQYF-GIKLVRTPLDA--DYRADVAAMREAITP------NTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp HHHH-TCEEEEECBCT--TSCBCHHHHHHHCCT------TEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEEC
T ss_pred HHHc-CCeeEEeeeCC--CCCCCHHHHHHHhcc------CCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEec
Confidence 8877 99999999874 678999999998864 7899999999999999977 6778889999999999999
Q ss_pred cccccccC---CCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcc-----
Q 037587 230 IYSGTVFD---SPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSS----- 301 (464)
Q Consensus 230 ay~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~----- 301 (464)
+|+++.+. ..+.....+... ..+..+++.|++|.++ +|.++|+++++++.+.........
T Consensus 277 a~~~~~~~~~~~~g~~~~~~~~~-----------~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 344 (514)
T 3mad_A 277 CLGGFILPWAERLGYPVPPFDFR-----------LEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGG 344 (514)
T ss_dssp TTTTTTHHHHHHTTCCCCCCSTT-----------STTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTC
T ss_pred ccccccchhHHhcCCCCCccccc-----------CCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCC
Confidence 99976431 000000111101 2245678899999974 788999999977654432111110
Q ss_pred -------cCCCChH---HHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEEEEEecCcccc
Q 037587 302 -------FGLVSSQ---TQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLFCWVDMRHLLV 370 (464)
Q Consensus 302 -------~~~~s~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f~~~~l~~~~~ 370 (464)
.++.+.. .+.++...+. ...+++..+.+.++++++.+.|++. |+++..+..+ ++|+..+..
T Consensus 345 ~~~~~~~~gs~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~-- 416 (514)
T 3mad_A 345 LYFSPTFAGSRPGALSATAWAAMLSLG-----EEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL-- 416 (514)
T ss_dssp SEEESSSCSSCCHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS--
T ss_pred cccCCccCCCCchHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC--
Confidence 0112222 2333333332 2345667777788889999999987 8888776666 677765321
Q ss_pred cCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHHhhCc
Q 037587 371 SNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 371 ~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+..++...|. ++||.+ +|..| ++++|++++. .+++++++++++|++++++.+.
T Consensus 417 -----~~~~l~~~L~-~~Gi~v-~g~~~----~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 417 -----NIYQVMEEMA-GRGWRL-NGLHR----PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp -----CHHHHHHHHH-TTTCBC-EEETT----TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHH-hcCCEe-ccCCC----CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1224666665 669988 55433 4679999974 4579999999999999987653
No 161
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=1.4e-27 Score=239.80 Aligned_cols=326 Identities=12% Similarity=0.040 Sum_probs=217.4
Q ss_pred CceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccc-cCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCCCcE
Q 037587 36 SGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELA-LFQD--YHGFPDAKKELVKLMARIRGNKVKFDPNKL 112 (464)
Q Consensus 36 ~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i 112 (464)
++.+.|+.+.+..+++.+.+++.+..... . + ..... .|+. .....++++.++++++ +++++|
T Consensus 27 ~~~~yld~~~~~~~~~~v~~a~~~~l~~~-~---~---~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~~v 91 (416)
T 1qz9_A 27 EGVIYLDGNSLGARPVAALARAQAVIAEE-W---G---NGLIRSWNSAGWRDLSERLGNRLATLIG--------ARDGEV 91 (416)
T ss_dssp TTCEECCTTTSCCCBTTHHHHHHHHHHTC-C---C---CCGGGHHHHTSGGGHHHHHHHHHHTTTT--------CCTTSE
T ss_pred CCeEeecCCCcCCCcHHHHHHHHHHHHHH-H---h---ccCccccchhhHHHHHHHHHHHHHHHcC--------CCcccE
Confidence 46688888877655566666665532100 0 0 00000 1110 1233567777777664 567899
Q ss_pred EEeCChHHHHHHHHHHhc------CCCCeE-EEcCCCCCChhhhcc---cCC--CcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFCLA------DPGDAF-LLPTPYYPGFDRDLK---WRP--GVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~------~~gd~V-lv~~p~y~~~~~~~~---~~~--g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
++|+|+++++..++.+++ ++||.| +++.++|+.+...+. ... |++++.++. ++++++.+
T Consensus 92 ~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i 162 (416)
T 1qz9_A 92 VVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAI 162 (416)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHC
T ss_pred EEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHh
Confidence 999999999998888876 899875 454557765443221 112 788888874 57777766
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCC
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDD 260 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (464)
.+ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|+ ++.. . .++..+
T Consensus 163 ~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~---~g~~--~-~~~~~~----------- 216 (416)
T 1qz9_A 163 DQ------DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHS---AGAV--P-VDLHQA----------- 216 (416)
T ss_dssp ST------TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTT---TTTS--C-CCHHHH-----------
T ss_pred CC------CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccc---ccCc--C-CChhhc-----------
Confidence 43 7899999999999999987 6778889999999999999997 3322 1 122222
Q ss_pred CCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHh-------------------------cccCCCChHHHHHHH
Q 037587 261 LWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKM-------------------------SSFGLVSSQTQYLLS 314 (464)
Q Consensus 261 ~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~-------------------------~~~~~~s~~~q~~~~ 314 (464)
+..+++.|+||.++ +|.++ ||++++++.+ +.+... ...++.+...+.++.
T Consensus 217 --~~d~~~~s~~K~l~-~g~~~~g~l~~~~~~~-~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 292 (416)
T 1qz9_A 217 --GADYAIGCTYKYLN-GGPGSQAFVWVSPQLC-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVE 292 (416)
T ss_dssp --TCSEEEECSSSTTC-CCTTCCCEEEECTTTT-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHH
T ss_pred --CCCEEEecCcccCC-CCCCCeEEEEECHHHH-hccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHH
Confidence 24477899999985 67777 9999965532 222211 112235556666555
Q ss_pred HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCC----ccEEEEEecCcccccCChhHHHHHHHHHHH
Q 037587 315 RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSN----AGLFCWVDMRHLLVSNTFEAEKELWKKIIF 386 (464)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~----~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~ 386 (464)
++++... .+++++.++.++++++++.+.|.+. |+++..+. .+.++|++++. ..++...|.
T Consensus 293 ~al~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~l~- 360 (416)
T 1qz9_A 293 CGLDVFA--QTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE---------GYAVIQALI- 360 (416)
T ss_dssp HHHHHHT--TSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT---------HHHHHHHHH-
T ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC---------HHHHHHHHH-
Confidence 5554211 1235667777888888899999886 88887663 24478998863 124666664
Q ss_pred hcCeEEeCCCCCCCCCCCeEEEEee--cCCHHHHHHHHHHHHHHHHhhC
Q 037587 387 EVGLNISPGSSCHCNEPGWFRICFA--NITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 387 ~~gI~v~pg~~f~~~~~~~~Ris~~--~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++||.+... ..+++||+++ ..+++++++++++|++++++..
T Consensus 361 ~~gi~~~~~------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 361 DRGVIGDYR------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp TTTEECEEE------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred hCCcEeccC------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 679997532 3578999997 3689999999999999988654
No 162
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.95 E-value=9.1e-27 Score=236.49 Aligned_cols=346 Identities=10% Similarity=0.049 Sum_probs=218.3
Q ss_pred CCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCC-CCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDY-HGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
.....+||++.+. +.+ +++.+.+++.+.. .... +... .+..++++.+++.+.+..+ .
T Consensus 47 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~-------------~~~~-~~~~~~~~~~~~~~l~~~la~~~~----~ 108 (449)
T 3a8u_X 47 DKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQL-------------STLD-YSPGFQYGHPLSFQLAEKITDLTP----G 108 (449)
T ss_dssp TTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHT-------------TTCS-CCCSSSCCCHHHHHHHHHHHTTSS----T
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHH-------------HhCC-CccccccCCHHHHHHHHHHHHhCC----C
Confidence 3445678987664 444 3466666666542 1111 2111 3445666777777765433 4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhh-hcccC-------------CCcEEEEEecCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDR-DLKWR-------------PGVEIVPIHCSS 165 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~-~~~~~-------------~g~~~~~v~~~~ 165 (464)
.+++|++|+|+++++..+++++.. +||.|++.+|+|+++.. .+... .|+..++++...
T Consensus 109 ~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~ 188 (449)
T 3a8u_X 109 NLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLA 188 (449)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCG
T ss_pred CCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccc
Confidence 678999999999999999988764 67999999999987643 22222 133444433211
Q ss_pred CCCc-ccC--------HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 166 SNGF-RIT--------ISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 166 ~~~~-~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
...| .+| +++|++.+++.. .++++ +++++| +||||. ..+.+.+++|.++|+++|+++|+||+|.++
T Consensus 189 ~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~ 265 (449)
T 3a8u_X 189 SNAYSRGMPKEGGIALADELLKLIELHD--ASNIA-AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGF 265 (449)
T ss_dssp GGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEE-EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred cCccccCChHHHHHHHHHHHHHHHHhcC--CCCEE-EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Confidence 1111 145 889998886420 02555 455667 478997 557899999999999999999999999764
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-----------ccc
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-----------SSF 302 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-----------~~~ 302 (464)
...+. . .. ..... ....++ ||||.++ +| +|+||++++ +.+.+.+... ...
T Consensus 266 g~~g~--~-~~-~~~~~---------~~~di~---s~sK~l~-~G~~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~t 327 (449)
T 3a8u_X 266 GRTGS--M-FG-ADSFG---------VTPDLM---CIAKQVT-NGAIPMGAVIAS-TEIYQTFMNQPTPEYAVEFPHGYT 327 (449)
T ss_dssp TTTSS--S-SH-HHHHT---------CCCSEE---EECGGGG-TTSSCCEEEEEE-HHHHHHHHTCSSCTTSCSSCCCCT
T ss_pred cccCc--c-hh-hhhcC---------CCCCEE---EEccccc-CCCCceEEEEEC-HHHHHHhhccCcccccccccccCC
Confidence 33222 1 11 11211 112322 9999998 68 999999985 4555555442 112
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ce---eecCCccEEEEEecCcccccCChhHHH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IR---CLKSNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~---~~~~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
+..+++++.++.++++..+ + +...+.++++++++.+.|++++ ++ ..++. |+|+|++++....... ....
T Consensus 328 ~~~~~~~~aa~~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~i~~~~~~~~~~-~~~~ 400 (449)
T 3a8u_X 328 YSAHPVACAAGLAALCLLQ---K--ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNF-GLAGAIQIAPRDGDAI-VRPF 400 (449)
T ss_dssp TTTCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEE-TTEEEEEECCBTTBSS-HHHH
T ss_pred CcccHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeee-EEEEEEEEecCccccc-ccHH
Confidence 3457788888777775321 1 1234455566666777776542 22 22333 5689999875321110 0122
Q ss_pred HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 379 ELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++...++ ++||.++|+. +++||+++. .+++++++++++|++++++.
T Consensus 401 ~~~~~l~-~~Gv~v~~~g-------~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 401 EAGMALW-KAGFYVRFGG-------DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp HHHHHHH-HHTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-HCCcEEecCC-------CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4667776 5699999861 689999763 69999999999999998753
No 163
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.95 E-value=7.4e-27 Score=236.32 Aligned_cols=328 Identities=14% Similarity=0.098 Sum_probs=215.7
Q ss_pred CCCceEEeeccccc--c--cHHHHHHHHHhhhhhHHhhhccccccccc-ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 34 NPSGIIQMGLAENQ--L--SFDLLESWLASNQEAVELKRNGESLFREL-ALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 34 ~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
+...+|||..+.+. + +++.+.+++.+..+. .... ..|+ .....++++.++++++
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~----------~~~~~~~~~-~~~~~~l~~~la~~~g---------- 132 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDK----------LTLTSRAFY-NNVLGEYEEYITKLFN---------- 132 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTT----------CSCCCTTSE-ESSHHHHHHHHHHHHT----------
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHh----------cCcccCccC-CHHHHHHHHHHHHhcC----------
Confidence 44568999886543 3 346677766654211 0111 1232 1234666666666652
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---------CCC-CeEEEcCCCCCChhh-hcccCCC------------cEEEEEecCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLA---------DPG-DAFLLPTPYYPGFDR-DLKWRPG------------VEIVPIHCSS 165 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~---------~~g-d~Vlv~~p~y~~~~~-~~~~~~g------------~~~~~v~~~~ 165 (464)
.++|++++|+++++..++.++. .+| |.|++.+|+|++... .+... | ..++.++.
T Consensus 133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~-g~~~~~~~~~p~~~~v~~~~~-- 209 (439)
T 2oat_A 133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSS-TDPTSYDGFGPFMPGFDIIPY-- 209 (439)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTC-CCHHHHTTSCSCCTTEEEECS--
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcC-CChhcccCCCCCCCCeEEeCC--
Confidence 5789999999999999998864 357 899999999987643 33322 3 35556653
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
.|+++|++.++. +++++|+ ++| +|++|. .++.+.+++|.++|+++|+++|+||+|.++...+. .+
T Consensus 210 -----~d~~~le~~l~~-----~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~--~~ 276 (439)
T 2oat_A 210 -----NDLPALERALQD-----PNVAAFM-VEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR--WL 276 (439)
T ss_dssp -----SCHHHHHHHTTS-----TTEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--SS
T ss_pred -----CCHHHHHHHhCC-----CCEEEEE-EECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc--ch
Confidence 278999888741 2666555 556 577896 56889999999999999999999999976433222 11
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCc
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~ 320 (464)
. .+... ....++ ||||.+| +| +|+||+++++ .+.+.+... ...+..+++++.++.++++..
T Consensus 277 -~-~~~~~---------~~~Di~---t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~ 340 (439)
T 2oat_A 277 -A-VDYEN---------VRPDIV---LLGKALS-GGLYPVSAVLCDD-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVL 340 (439)
T ss_dssp -G-GGGGT---------CCCSEE---EECGGGG-TTSSCCEEEEECH-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHH
T ss_pred -h-HHHhC---------CCCcEE---Eeccccc-CCCCCeEEEEECH-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHH
Confidence 1 11111 112222 9999999 79 9999999954 444433321 222346778888777776532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCee---ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCC
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVAGIRC---LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSS 397 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~ 397 (464)
+ + +...+.++++++++.+.|+++++++ .++. |.|+|++++.... ....+++..++ ++||.+.|+
T Consensus 341 ~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-g~~~~v~l~~~~~----~~~~~l~~~l~-~~Gv~v~~~-- 407 (439)
T 2oat_A 341 E---E--ENLAENADKLGIILRNELMKLPSDVVTAVRGK-GLLNAIVIKETKD----WDAWKVCLRLR-DNGLLAKPT-- 407 (439)
T ss_dssp H---H--TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEE-TTEEEEEECCCSS----CCHHHHHHHHH-HTTEECCBS--
T ss_pred h---h--hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEee-eeEEEEEEecCcc----HHHHHHHHHHH-HCCeEEecC--
Confidence 1 1 1345566777788888888765442 2334 4588898874310 01235777776 579999984
Q ss_pred CCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 398 CHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 398 f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+.+++||+++. .+++++++++++|++++++
T Consensus 408 ----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 408 ----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp ----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 25789998865 6899999999999998864
No 164
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=4e-27 Score=239.36 Aligned_cols=342 Identities=11% Similarity=0.039 Sum_probs=215.7
Q ss_pred CCC--ceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCC
Q 037587 34 NPS--GIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKF 107 (464)
Q Consensus 34 ~~~--~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~ 107 (464)
+.. .+||+..+ .|.+. +|.+.+++.+... ....+....+..+...++++.+.+..+ .
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~-------------~~~~~~~~~~~~~~~~~L~e~la~~~~----~ 133 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLR-------------VMNHVMFGGLTHEPAARLAKLLVDITP----A 133 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHH-------------HCSCCCSSSEECHHHHHHHHHHHHHSS----T
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHH-------------hccCccccccCCHHHHHHHHHHHHhCC----C
Confidence 455 78999876 55664 5667777666422 111111111223445555555554433 4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcC-------CC-CeEEEcCCCCCChhhhcccCCC-------------cEEEEEecCCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLAD-------PG-DAFLLPTPYYPGFDRDLKWRPG-------------VEIVPIHCSSS 166 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~~g-------------~~~~~v~~~~~ 166 (464)
..++|++|+|+++++..+++++.. +| +.|++.+++|.++...+....+ ..+..++.+..
T Consensus 134 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 213 (457)
T 3tfu_A 134 GLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR 213 (457)
T ss_dssp TEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS
T ss_pred CcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc
Confidence 567999999999999999988764 55 5899999999876533322201 12222333221
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITN-PSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
.....|+++|++.+++. ..++++|++.. ++||+|.++ +.+.+++|.++|+++|+++|+||+|.++...+. . .
T Consensus 214 ~~~~~d~~~le~~l~~~---~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~--~-~ 287 (457)
T 3tfu_A 214 DYDPAYSAAFEAQLAQH---AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA--L-F 287 (457)
T ss_dssp SCCHHHHHHHHHHHHHH---GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS--S-S
T ss_pred ccCHHHHHHHHHHHHhC---CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc--h-h
Confidence 11124788899888742 23677777776 789999876 777899999999999999999999987533332 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH-------hcccCCCChHHHHHHHHH
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK-------MSSFGLVSSQTQYLLSRM 316 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~ 316 (464)
. .+... ..++++ ||||.++ .| +|+||++++ +.+.+.+.. ....+..++++++++.++
T Consensus 288 a-~~~~~---------~~pdii---t~sK~l~-gG~~~lG~v~~~-~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aa 352 (457)
T 3tfu_A 288 A-ADHAG---------VSPDIM---CVGKALT-GGYLSLAATLCT-ADVAHTISAGAAGALMHGPTFMANPLACAVSVAS 352 (457)
T ss_dssp T-HHHHT---------CCCSEE---EECGGGG-TTSSCCEEEEEE-HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHH
T ss_pred H-hHhcC---------CCceEE---EEChhhh-CCCcceEEEEEc-HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHH
Confidence 1 11211 113333 9999987 56 799999995 455555531 112234678888888777
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEE
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI 392 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v 392 (464)
|+..+- +...+.+++..+++.+.|+++ ++...++.| +|++++++.... ..+++..++ ++||.+
T Consensus 353 L~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G-~~~~i~l~~~~~------~~~~~~~l~-~~Gv~v 419 (457)
T 3tfu_A 353 VELLLG-----QDWRTRITELAAGLTAGLDTARALPAVTDVRVCG-AIGVIECDRPVD------LAVATPAAL-DRGVWL 419 (457)
T ss_dssp HHHHHT-----SCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECS-SCEEEEESSCCC------HHHHHHHHH-HTTEEC
T ss_pred HHHHhh-----hHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCC-eEEEEEECCccc------HHHHHHHHH-HCCeEE
Confidence 652110 112233334445555555543 344444455 588888875321 235677776 569999
Q ss_pred eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 393 SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 393 ~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+|+ .+++||+++. .+++++++++++|++++++..
T Consensus 420 ~~~-------~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 420 RPF-------RNLVYAMPPYICTPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp CCB-------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred Eec-------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 874 2589999765 689999999999999998654
No 165
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=9.2e-27 Score=238.30 Aligned_cols=344 Identities=15% Similarity=0.112 Sum_probs=225.1
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCC----cE
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPN----KL 112 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~----~i 112 (464)
+.|+|..++|+.+ +.+.+++.+..... . .++ ......|....+..++++.+.+++.+.+| ++++ +|
T Consensus 45 ~~i~L~a~e~~~~-~~V~eA~~~~l~~~-~-~~g---~p~~~~y~~~~~~~~le~~~~~~~a~~~g----~~~~~~~~~V 114 (483)
T 1rv3_A 45 VGLELIASENFAS-RAVLEALGSCLNNK-Y-SLG---YPGQRYYGGTEHIDELETLCQKRALQAYG----LDPQCWGVNV 114 (483)
T ss_dssp SSEECCTTCCCCC-HHHHHHHTSGGGTC-C-CCE---ETTEESSSCCHHHHHHHHHHHHHHHHHTT----CCTTTEEEEC
T ss_pred cCeEEEcCCCCCC-HHHHHHHHHHHhcc-C-ccc---CCCccccCcchhHHHHHHHHHHHHHHHhC----CCcccCceEE
Confidence 4699988888754 44555554431100 0 000 00001122223346778777788877766 4553 48
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc--------ccCCC--cEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL--------KWRPG--VEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~--------~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
++++|+ +++..++.++++|||+|++++|+|.++.... ... | .+++++++++ .++.+|+++|++.+.+
T Consensus 115 ~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~-G~~~~~v~~~~~~-~~~~iD~d~le~~i~~ 191 (483)
T 1rv3_A 115 QPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISAT-SIFFESMAYKVNP-DTGYIDYDRLEENARL 191 (483)
T ss_dssp CCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHH-HHHSEEEEECBCT-TTCSBCHHHHHHHHHH
T ss_pred EECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccc-cceEEEEECcccc-CCCcCCHHHHHHHHhh
Confidence 888888 8888888999999999999999998775422 222 4 4555555553 3578999999999973
Q ss_pred HhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc-cccCCCCCCccchhhhhhccCcCCCCCC
Q 037587 183 AQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG-TVFDSPSSSFISIMEAVMDRNIDESDDL 261 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 261 (464)
. ++++|++ +++||+ .+++ +++|.++|+++|+++|+|++|.. +.+.+. . .+.. +
T Consensus 192 ~-----~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~-~~p~---~---------- 245 (483)
T 1rv3_A 192 F-----HPKLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--V-PSPF---E---------- 245 (483)
T ss_dssp H-----CCSEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--S-CCGG---G----------
T ss_pred c-----CCcEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--C-CCCC---C----------
Confidence 2 7898888 899998 7766 77888899999999999999863 222222 1 1111 1
Q ss_pred CCcEEEEcCCCcCCCCCccEEEEEEecCH--------------HHHHHHHHh-cc--cCCCChHHHHHHHHHcCCchhhH
Q 037587 262 WSRIHIVYSLSKDFSMPGFRVGMIYSNNE--------------RVVSAATKM-SS--FGLVSSQTQYLLSRMLSDKKFTC 324 (464)
Q Consensus 262 ~~~vi~l~S~SK~~g~~GlRiG~l~~~~~--------------~~~~~~~~~-~~--~~~~s~~~q~~~~~~l~~~~~~~ 324 (464)
...+++.|+||++ .|+|.||++++++ .+...+... .+ .++.+.....++..++.... .
T Consensus 246 -~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~--~ 320 (483)
T 1rv3_A 246 -HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAM--T 320 (483)
T ss_dssp -TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHT--S
T ss_pred -CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHh--C
Confidence 1236789999987 6888899998754 123333222 11 12233333444444443211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC-ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe----CCCCCC
Q 037587 325 NYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN-AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS----PGSSCH 399 (464)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~----pg~~f~ 399 (464)
..+++.++++.++++++.+.|.+.|+++..+. .++++|++++... . . ..++ ..+|++.||.+. ||..+.
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g--~--~-~~~~-~~~L~~~gI~v~~~~~pg~~~~ 394 (483)
T 1rv3_A 321 PEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKG--T--D-GGRA-EKVLEACSIACNKNTCPGDKSA 394 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGT--C--C-HHHH-HHHHHHTTEECEEECCSSCSCT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCC--C--C-HHHH-HHHHHhCCcEEecCCCCCCCcC
Confidence 23566777888899999999999899887653 3568889886421 0 1 1123 455678899999 887422
Q ss_pred CCCCCeEEEEeec-CC----HHHHHHHHHHHHHHHHh
Q 037587 400 CNEPGWFRICFAN-IT----EETLQVALQRIKVFAQS 431 (464)
Q Consensus 400 ~~~~~~~Ris~~~-~~----~e~l~~~l~~l~~~l~~ 431 (464)
..++++||+++. .+ ++++++++++|+++++.
T Consensus 395 -~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 395 -LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp -TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 246789999975 34 89999999999999876
No 166
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.95 E-value=2e-26 Score=232.87 Aligned_cols=331 Identities=15% Similarity=0.136 Sum_probs=204.3
Q ss_pred CCCCceEEeecccc--cc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAEN--QL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~n--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.+...+|||+.+.+ ++ ++|.+.+++.+..+ ....|.. ....+++..+++.+.+..+
T Consensus 62 ~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~-------------~~~~~~~-~~~~~~~~~l~~~la~~~g------ 121 (433)
T 1z7d_A 62 VNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAK-------------NLTICSR-AFFSVPLGICERYLTNLLG------ 121 (433)
T ss_dssp TTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHT-------------TCSCCCT-TSEEHHHHHHHHHHHHHHT------
T ss_pred CCCCEEEEcccchhhcccCCCCHHHHHHHHHHHH-------------hCCCccC-CcCCHHHHHHHHHHHhhcC------
Confidence 34556899987543 43 34667776666421 1111111 1123444455555444332
Q ss_pred CCcEEEeCChHHHHHHHHHHhc---------CCC-CeEEEcCCCCCChhhhcccCCC------------cEEEEEecCCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLA---------DPG-DAFLLPTPYYPGFDRDLKWRPG------------VEIVPIHCSSS 166 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~---------~~g-d~Vlv~~p~y~~~~~~~~~~~g------------~~~~~v~~~~~ 166 (464)
.++|++++|+++++..+++++. .+| +.|++.+|+|+++...+....| ..++.+|.
T Consensus 122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~--- 198 (433)
T 1z7d_A 122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY--- 198 (433)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT---
T ss_pred CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC---
Confidence 5789999999999999998753 467 9999999999876443222213 23444442
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
.|++.|++.++. +++++| +++| +|+||.+ +|.+.+++|.++|+++|+++|+||+|.++...+. . .
T Consensus 199 ----~d~~~le~~l~~-----~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~--~-~ 265 (433)
T 1z7d_A 199 ----DDLEALEEELKD-----PNVCAF-IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK--L-L 265 (433)
T ss_dssp ----TCHHHHHHHHTS-----TTEEEE-EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS--S-S
T ss_pred ----CCHHHHHHHhCC-----CCEEEE-EEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc--c-h
Confidence 278999988841 267655 4556 5778975 6888999999999999999999999986433222 1 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--cccCCCChHHHHHHHHHcCCch
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--SSFGLVSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--~~~~~~s~~~q~~~~~~l~~~~ 321 (464)
. .+... ....+ .||||.+| +| +|+||+++++ .+.+.+... ...+..+++++.++.++++..+
T Consensus 266 ~-~~~~~---------~~~di---~t~sK~l~-~G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~ 330 (433)
T 1z7d_A 266 C-VHHYN---------VKPDV---ILLGKALS-GGHYPISAVLAND-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLI 330 (433)
T ss_dssp G-GGGGT---------CCCSE---EEECGGGG-TTSSCCEEEEECH-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred h-hHhcC---------CCCCE---EEECcccc-CCCCCeEEEEECH-HHHhhhccccccccCCCCHHHHHHHHHHHHHHH
Confidence 1 11111 11222 28999999 89 9999999954 444433321 1223467788887777765321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhC--CCe---eecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVA--GIR---CLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS 396 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~---~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~ 396 (464)
+ +...+.++++++++.+.|+++ +++ ..++. |.|+|++++... ....+++..++ ++||.+.|+
T Consensus 331 ---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~-g~~~~i~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~- 397 (433)
T 1z7d_A 331 ---N--EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGK-GLLCAIEFKNEL-----VNVLDICLKLK-ENGLITRDV- 397 (433)
T ss_dssp ---H--TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEE-TTEEEEEECTTT-----CCHHHHHHHHH-HTTEECCEE-
T ss_pred ---h--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEee-eeEEEEEEccCh-----hHHHHHHHHHH-HCCeEEecC-
Confidence 1 123444555666666666654 332 23344 458889887421 01235677776 579999986
Q ss_pred CCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 397 SCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 397 ~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+.+++||+++. .+++++++++++|++++++.
T Consensus 398 -----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 398 -----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp -----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 25689998875 68999999999999998764
No 167
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.7e-27 Score=236.83 Aligned_cols=342 Identities=13% Similarity=0.096 Sum_probs=217.0
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCC---CCCcHHHH--HHHH-HHHHHHcCCCCCCCCC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQD---YHGFPDAK--KELV-KLMARIRGNKVKFDPN 110 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr--~~ia-~~~~~~~~~~~~~~~~ 110 (464)
+.|+|..++|+.+ +.+.+++.+.... .....|+. +.|...++ ++++ +++.+.+| ++.
T Consensus 46 ~~i~l~~~~~~~~-~~v~~a~~~~~~~-----------~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g----~~~- 108 (447)
T 3h7f_A 46 DTLEMIASENFVP-RAVLQAQGSVLTN-----------KYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG----AEF- 108 (447)
T ss_dssp HSEECCTTCCCCC-HHHHHHHTSGGGG-----------CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT----CSE-
T ss_pred CceeEecCCCCCC-HHHHHHHHHHhcC-----------CccccCCcccccCccHHHHHHHHHHHHHHHHHcC----CCc-
Confidence 5689988888764 4455555443110 00112221 12444444 5555 66666554 333
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh-hhc--ccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD-RDL--KWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~--~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++++|+++++..++.+++++||+|+++.|+|..+. ... ... .+..++++++++ +++.+|++++++.+.+.
T Consensus 109 ~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~--- 184 (447)
T 3h7f_A 109 ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEF--- 184 (447)
T ss_dssp EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHH---
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhc---
Confidence 2333777889999999999999999999999998732 211 111 144666777654 34679999999998652
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc-cccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG-TVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
++++|++++|+||++. ++++|.++|+++|+++|+||+|.. +.+.+. . .+.. + ...
T Consensus 185 --~~~~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~-~~~~---~-----------~~d 240 (447)
T 3h7f_A 185 --RPKVIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--H-PSPV---P-----------HAD 240 (447)
T ss_dssp --CCSEEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--S-CCST---T-----------TCS
T ss_pred --CCeEEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--C-CCCC---C-----------CCc
Confidence 6788888899999986 578899999999999999999743 223222 1 1111 1 123
Q ss_pred EEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-cccC--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SSFG--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLV 342 (464)
Q Consensus 266 i~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 342 (464)
+++.|+||++ +|+|.||++++++ +.+.+... ..+. +.....+.++..++... ....+++.++.+.++++++.
T Consensus 241 i~~~s~sK~l--~G~~gG~i~~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~ 315 (447)
T 3h7f_A 241 VVSTTVHKTL--GGGRSGLIVGKQQ-YAKAINSAVFPGQQGGPLMHVIAGKAVALKIA--ATPEFADRQRRTLSGARIIA 315 (447)
T ss_dssp EEEEESSGGG--CCCSCEEEEECGG-GHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCcCC--CCCCeEEEEECHH-HHHHHhhhcCCcccCCccHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHH
Confidence 6789999987 5889999999554 44444433 2222 22233333333333221 12235667778888889999
Q ss_pred HHHHhC-----CCeeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeec
Q 037587 343 SGLKVA-----GIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFAN 412 (464)
Q Consensus 343 ~~l~~~-----g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~ 412 (464)
+.|.+. |+++.. +..++++|+++..... . .+.+..+++++||.+. |+..+++..++++||++..
T Consensus 316 ~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~ 389 (447)
T 3h7f_A 316 DRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL----D--GQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPA 389 (447)
T ss_dssp HHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC----C--HHHHHHHHHHTTEECBC-------------CEEEEECHH
T ss_pred HHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC----C--HHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHH
Confidence 999887 888765 3345688888853211 1 1345666778899998 6643333446789998753
Q ss_pred -----CCHHHHHHHHHHHHHHHHhhCc
Q 037587 413 -----ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 413 -----~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+++++++++++.|.+++++...
T Consensus 390 ~~~~~~~~eei~~~~~~l~~~l~~~~~ 416 (447)
T 3h7f_A 390 LATRGFGDTEFTEVADIIATALATGSS 416 (447)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHSGGG
T ss_pred HhhCCCCHHHHHHHHHHHHHHHhccCc
Confidence 4689999999999999987654
No 168
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=1.5e-26 Score=231.39 Aligned_cols=193 Identities=22% Similarity=0.277 Sum_probs=145.1
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWR 153 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~ 153 (464)
.+|+. .+..+|++++|++++ .+ +.|++++| ++++..++. ++++||.|+++.|+|++.... ++..
T Consensus 62 ~r~~~-p~~~~l~~~la~~~g--------~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~ 129 (403)
T 3cog_A 62 SRSGN-PTRNCLEKAVAALDG--------AK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEF 129 (403)
T ss_dssp ----C-HHHHHHHHHHHHHHT--------CS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGG
T ss_pred cCCCC-chHHHHHHHHHHHhC--------CC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHc
Confidence 34543 346899999999986 22 66777776 589999998 899999999999999874432 3445
Q ss_pred CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC-eEEEEecccc
Q 037587 154 PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR-IHIVSDEIYS 232 (464)
Q Consensus 154 ~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~-~~lI~Deay~ 232 (464)
|++++.++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|+++|+++| +++|+||+|.
T Consensus 130 -G~~v~~v~~~-------d~~~l~~~i~~------~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~ 192 (403)
T 3cog_A 130 -GLKISFVDCS-------KIKLLEAAITP------ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFM 192 (403)
T ss_dssp -TCEEEEECTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTT
T ss_pred -CCEEEEECCC-------CHHHHHHhcCc------CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCc
Confidence 9999998864 68888887753 7899999999999999986 788899999999 9999999998
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcc-cC-CCChHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSS-FG-LVSSQT 309 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~-~~-~~s~~~ 309 (464)
...+. . ++ .+ +.+++++|+||.+|.+| +|+||++++++.+.+.+..... +. ..+++.
T Consensus 193 ~~~~~-~-----~~-~~-------------~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~ 252 (403)
T 3cog_A 193 SPYFQ-R-----PL-AL-------------GADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPID 252 (403)
T ss_dssp CTTTC-C-----TT-TT-------------TCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred ccccC-C-----cc-cc-------------CCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHH
Confidence 65332 1 11 11 46688999999998766 5799999966666555544332 22 357778
Q ss_pred HHHHHHHcCC
Q 037587 310 QYLLSRMLSD 319 (464)
Q Consensus 310 q~~~~~~l~~ 319 (464)
+.++...++.
T Consensus 253 ~~~~~~~l~~ 262 (403)
T 3cog_A 253 CYLCNRGLKT 262 (403)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHhhhhH
Confidence 8777777765
No 169
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.95 E-value=5.2e-26 Score=227.40 Aligned_cols=294 Identities=15% Similarity=0.130 Sum_probs=200.8
Q ss_pred HHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-c--ccCCCc--EEEEEecCC
Q 037587 91 KELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-L--KWRPGV--EIVPIHCSS 165 (464)
Q Consensus 91 ~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~--~~~~g~--~~~~v~~~~ 165 (464)
++++++++ ++++.|++++| ++++..++.+++++||.|+++.|+|+.+... . ... |. +++.+++++
T Consensus 76 ~~la~~~g--------~~~~~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~ 145 (405)
T 2vi8_A 76 ERAKQLFG--------AEHANVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFS-GVQYNFVAYGVDP 145 (405)
T ss_dssp HHHHHHHT--------CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHH-HHHSEEEEECBCT
T ss_pred HHHHHHhC--------CCceEEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhc-cceeEEEeccccc
Confidence 45666553 45555556677 9999999999999999999999999887542 1 222 44 777777653
Q ss_pred CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccc
Q 037587 166 SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFIS 245 (464)
Q Consensus 166 ~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~ 245 (464)
.++.+|++++++.+++. ++++|++ +|+|+ |... ++++|.++|+++|+++|+||+|....+... ....
T Consensus 146 -~~~~~d~~~l~~~i~~~-----~~~~v~~-~~~~~-~~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~~~ 212 (405)
T 2vi8_A 146 -ETHVIDYDDVREKARLH-----RPKLIVA-AAAAY-PRII---DFAKFREIADEVGAYLMVDMAHIAGLVAAG--LHPN 212 (405)
T ss_dssp -TTCSBCHHHHHHHHHHH-----CCSEEEE-CCSSC-CSCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTT--SSCC
T ss_pred -ccCCcCHHHHHHHHHhc-----CCeEEEE-eCCCC-CccC---CHHHHHHHHHHcCCEEEEEccccccccccC--cCCC
Confidence 35779999999998752 5677666 56554 3443 378899999999999999999984322221 1011
Q ss_pred hhhhhhccCcCCCCCCCCcEEEEcCCCcCCC-CCccEEEEEEecCHHHHHHHHHhcccCC---CChHHHHHHHHHcCCch
Q 037587 246 IMEAVMDRNIDESDDLWSRIHIVYSLSKDFS-MPGFRVGMIYSNNERVVSAATKMSSFGL---VSSQTQYLLSRMLSDKK 321 (464)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g-~~GlRiG~l~~~~~~~~~~~~~~~~~~~---~s~~~q~~~~~~l~~~~ 321 (464)
.+ . ...++++||||+++ +.| ||++++ +.+.+.+......+. .+.....++.++++...
T Consensus 213 --~~-~-----------~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~ 274 (405)
T 2vi8_A 213 --PV-P-----------YAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEAL 274 (405)
T ss_dssp --ST-T-----------TCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHH
T ss_pred --cc-c-----------cCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHH
Confidence 11 1 12277899999996 666 999995 555555554432221 23333334344554211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCC---
Q 037587 322 FTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSS--- 397 (464)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~--- 397 (464)
..++++.++.++++++++.+.|++.|+++..+ .+++++|++++... . ...++...| .++||.++||..
T Consensus 275 --~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l-~~~gi~v~~g~~~~~ 346 (405)
T 2vi8_A 275 --QDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQ--L---TGKTAEKVL-DEVGITVNKNTIPYD 346 (405)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGT--C---CHHHHHHHH-HHHTEECEEECCTTC
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCC--C---CHHHHHHHH-HHcCceeccCcCccc
Confidence 23567788888999999999999889888764 35679999987421 0 122455554 678999999863
Q ss_pred -CCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHhhC
Q 037587 398 -CHCNEPGWFRICFAN-----ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 398 -f~~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~~ 433 (464)
++...++++||+++. ++++++++++++|++++++.+
T Consensus 347 ~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 347 PESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp SSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred cCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 333345789999984 579999999999999987665
No 170
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.95 E-value=8.6e-27 Score=226.89 Aligned_cols=276 Identities=14% Similarity=0.153 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v~~ 163 (464)
++++++|++++ .+ +.+++++| ++++..++.+++++||.|+++.|+|+.+...+ ... |++++.++.
T Consensus 2 ~l~~~la~~~g--------~~-~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~ 70 (331)
T 1pff_A 2 ALEGKIAKLEH--------AE-ACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKF-GVEVDFIDM 70 (331)
T ss_dssp HHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHT-TCEEEEECT
T ss_pred hHHHHHHHHhC--------CC-eEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhc-CCEEEEeCC
Confidence 68999999986 33 55555555 89999999999999999999999999876654 235 999988875
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh-CCeEEEEeccccccccCCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS-KRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~-~~~~lI~Deay~~~~~~~~~~~ 242 (464)
.|++.+++.+++ ++++|++++|+||||.+++ +++|.++|++ +|+++|+||+|....+. .
T Consensus 71 -------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~-~--- 130 (331)
T 1pff_A 71 -------AVPGNIEKHLKP------NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT-N--- 130 (331)
T ss_dssp -------TSTTHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC-C---
T ss_pred -------CCHHHHHHhhcC------CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC-C---
Confidence 367888887653 7899999999999999986 7888999999 99999999999854332 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE-EEEEEecCHHHHHHHHHhccc-C--CCChHHHHHHHHHcC
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR-VGMIYSNNERVVSAATKMSSF-G--LVSSQTQYLLSRMLS 318 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR-iG~l~~~~~~~~~~~~~~~~~-~--~~s~~~q~~~~~~l~ 318 (464)
+. .. ++++++.|+||.+|.+|.| +||++++++.+.+.+...... + ..+++.+.++...++
T Consensus 131 --~~-~~-------------~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (331)
T 1pff_A 131 --PL-DL-------------GVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTL 194 (331)
T ss_dssp --GG-GG-------------TCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred --hh-hc-------------CCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence 11 11 5678899999999989999 899999653566666554443 2 456667666555543
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC---------------CCeeec----CCccEEEEEecCcccccCChhHHHH
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA---------------GIRCLK----SNAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------------g~~~~~----~~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
. .....+...++...+.+.+++. ++++.+ ..++ ++.+.++. . +
T Consensus 195 ~-------~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~-~ 256 (331)
T 1pff_A 195 T-------LDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGS-MIAFDVDG---------L-E 256 (331)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCS-EEEEECSS---------H-H
T ss_pred h-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce-EEEEEECC---------H-H
Confidence 2 1122222333333344444322 222221 1344 66677651 1 1
Q ss_pred HHHHHHHhcCeEEeCCCCCC------------------------CCCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 380 LWKKIIFEVGLNISPGSSCH------------------------CNEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~------------------------~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
....+++++||.+++++.-+ ...++++||+++. .++++++.+++.|+++
T Consensus 257 ~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 257 KAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 24455678899887653111 0125799999987 5677788777777653
No 171
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=9.3e-26 Score=224.49 Aligned_cols=279 Identities=16% Similarity=0.157 Sum_probs=191.6
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~ 160 (464)
+..+++++++++++ .+ +.|++++| ++++..++.+++++||.|+++.|+|++.... +... |++++.
T Consensus 53 ~~~~l~~~la~~~~--------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~ 121 (386)
T 1cs1_A 53 TRDVVQRALAELEG--------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG-CYRVLF 121 (386)
T ss_dssp HHHHHHHHHHHHHT--------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTT-SCEEEE
T ss_pred cHHHHHHHHHHHhC--------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhc-CCEEEE
Confidence 45889999999986 23 66777666 8999999999999999999999999864443 2444 999998
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+. .
T Consensus 122 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~-~- 183 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAE------KPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ-N- 183 (386)
T ss_dssp ECTT-------CHHHHHHHHHT------CCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC-C-
T ss_pred eCCC-------CHHHHHHhhcc------CCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC-C-
Confidence 8753 78999998864 7899999999999999986 778888999999999999999865332 1
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhccc--CCCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSSF--GLVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 317 (464)
.. .+ +.++++.|+||.+|.+|.|+ ||++++++.+.+.+...... ...+++.+.++...+
T Consensus 184 ----~~-~~-------------~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l 245 (386)
T 1cs1_A 184 ----PL-AL-------------GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGL 245 (386)
T ss_dssp ----GG-GG-------------TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHH
T ss_pred ----cc-cc-------------CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Confidence 11 11 46688999999998899997 99999775555544443322 235667776665555
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-Ce-e-ec----------------CCccEEEEEecCcccccCChhHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IR-C-LK----------------SNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~-~-~~----------------~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
+. +....+.+.++++.+.+.|+++. +. + .+ ..++ ++.+.++.. .
T Consensus 246 ~~-------~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~- 308 (386)
T 1cs1_A 246 RT-------LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGA-MLSFELDGD--------E- 308 (386)
T ss_dssp TT-------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESSC--------H-
T ss_pred cH-------HHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCce-EEEEEECCC--------H-
Confidence 42 23334445556667777776642 21 1 11 1254 565666531 1
Q ss_pred HHHHHHHHhcCeEEeCCCCCC-------------------------CCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 379 ELWKKIIFEVGLNISPGSSCH-------------------------CNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~pg~~f~-------------------------~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
+.....+.++||.+++++ |+ ...++++||+++. ++.++.+++|.+++++
T Consensus 309 ~~~~~~l~~~gi~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 309 QTLRRFLGGLSLFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRA 382 (386)
T ss_dssp HHHHHHHHTCSSSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHH
Confidence 123445578899987421 11 0125799999986 3344444555544443
No 172
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.95 E-value=7.3e-26 Score=231.22 Aligned_cols=355 Identities=11% Similarity=0.039 Sum_probs=226.4
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||+..+ .+.+. +|.+.+++.+.. .....+....+..+++.++++++.+.++
T Consensus 47 ~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l-------------~~~~~~~~~~~~~~~~~~la~~l~~~~~-- 111 (476)
T 3i5t_A 47 YVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQA-------------MVLPYASPWYMATSPAARLAEKIATLTP-- 111 (476)
T ss_dssp EEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHH-------------HHCCCCCTTTCBCHHHHHHHHHHHTTSS--
T ss_pred EEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHH-------------HhccCcccCccCCHHHHHHHHHHHhcCC--
Confidence 3334455678999877 56553 567777766642 2222222224668889999999987643
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhhhcccCC--------------CcEEEEEe
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDRDLKWRP--------------GVEIVPIH 162 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~~--------------g~~~~~v~ 162 (464)
...++|++++|+++++..+++++.. .++.|++.+|+|+++...+.... +...++.|
T Consensus 112 --~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 189 (476)
T 3i5t_A 112 --GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSP 189 (476)
T ss_dssp --TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCC
T ss_pred --CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCC
Confidence 4567999999999999999998753 36799999999988764432221 22233333
Q ss_pred cCCCCCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 163 CSSSNGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 163 ~~~~~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
....+ +..+ +++|++.+.+.. ..++++|++..++|++|. +.+.+.+++|.++|+++|+++|+||+|.+
T Consensus 190 ~~~~~-~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g 266 (476)
T 3i5t_A 190 NPRHA-GNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTG 266 (476)
T ss_dssp CGGGC-TTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred ccccc-CCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccC
Confidence 21111 1222 678888776421 135677666666788885 77889999999999999999999999998
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh---------cccC
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM---------SSFG 303 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~---------~~~~ 303 (464)
+...+. . ........ ..+.++ +|||++| .| +|+|++++ ++.+.+.+... ...+
T Consensus 267 ~gr~G~--~-~~~~~~~~---------v~pdi~---t~sK~l~-~G~~plg~v~~-~~~i~~~~~~~~~~~~~~~~~~t~ 329 (476)
T 3i5t_A 267 FGRCGE--W-FASEKVFG---------VVPDII---TFAKGVT-SGYVPLGGLAI-SEAVLARISGENAKGSWFTNGYTY 329 (476)
T ss_dssp TTTTSS--S-CHHHHTTC---------CCCSEE---EECGGGG-TTSSCCEEEEE-CHHHHHTTSGGGCTTCEECCCCTT
T ss_pred CccccC--c-eeeecccC---------CCcchh---hhhhhhc-CCCcCeEEEEE-CHHHHHHHhcCCcccccccccCCC
Confidence 533332 1 12110111 112333 7899998 69 99999999 55565555432 1224
Q ss_pred CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccC-Chh---
Q 037587 304 LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSN-TFE--- 375 (464)
Q Consensus 304 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~-~~~--- 375 (464)
..++++++++.++|+..+- +...+.++++.+++.+.|+++ .+...++.|. |+++++....... .+.
T Consensus 330 ~~np~a~aAa~aaL~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~-~~~i~~~~~~~~~~~~~~~~ 403 (476)
T 3i5t_A 330 SNQPVACAAALANIELMER-----EGIVDQAREMADYFAAALASLRDLPGVAETRSVGL-VGCVQCLLDPTRADGTAEDK 403 (476)
T ss_dssp TTCHHHHHHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT-EEEEEECCC-----CCHHHH
T ss_pred CcCHHHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eeEEEEecCccccccccchh
Confidence 5678888888888763211 123334444555555555543 2344455554 7778876431111 100
Q ss_pred -HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 376 -AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 376 -~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
...+++..++ ++||.++|+. +++||++.. .+++++++++++|++++++...
T Consensus 404 ~~~~~~~~~l~-~~Gv~v~~~g-------~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 404 AFTLKIDERCF-ELGLIVRPLG-------DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp HHHHHHHHHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HCCCEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1335666665 5699999841 689999654 6999999999999999876653
No 173
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.95 E-value=2.8e-27 Score=236.42 Aligned_cols=282 Identities=12% Similarity=0.078 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCC-CCcEEE-eCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh-hhhcccC-CCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFD-PNKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYYPGF-DRDLKWR-PGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~-~~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~~~~-~g~~~~~v~ 162 (464)
.++|+.++++++ ++ +++|++ |+|+++++.+++.+++++| .+.+..+.|... ...+... .|.+++.++
T Consensus 81 ~~~~~~la~~~g--------~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~ 151 (398)
T 2fyf_A 81 GRVRSGLAELFS--------LPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIIT 151 (398)
T ss_dssp HHHHHHHHHHTT--------CCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEE
T ss_pred HHHHHHHHHHhC--------CCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEe
Confidence 445555555553 44 468998 9999999999999999887 223333323210 1112221 167788888
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSS 242 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~ 242 (464)
++ .++..+.+ + .+++++|++++|+||||.+++.+++.++ +|+++|+||+|+.+ .. +
T Consensus 152 ~~--~g~~~~~~-----i------~~~~~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~---~~--~ 207 (398)
T 2fyf_A 152 SD--PGSAPEPQ-----T------DPSVDVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAG---GL--P 207 (398)
T ss_dssp CC--TTCCCCCC-----C------CTTCSEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTT---TS--C
T ss_pred cC--CCCCCCcc-----c------cCCCCEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccC---Cc--c
Confidence 76 23433321 1 2378999999999999999998877664 79999999999843 12 1
Q ss_pred ccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----------------------
Q 037587 243 FISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM----------------------- 299 (464)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~----------------------- 299 (464)
.+ + . +..+++.|+||++|++| ++||++++++ +.+.+++.
T Consensus 208 -~~---~-~-----------~~di~~~s~sK~~~~~g-g~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (398)
T 2fyf_A 208 -VD---I-A-----------ETDAYYFAPQKNFASDG-GLWLAIMSPA-ALSRIEAIAATGRWVPDFLSLPIAVENSLKN 269 (398)
T ss_dssp -CC---G-G-----------GCSEEEECTTSTTCSCS-SEEEEEECHH-HHHHHHHHHHTTCCCCGGGCHHHHHHHHTTT
T ss_pred -cC---c-c-----------cCcEEEEecCcccCCCC-ceEEEEECHH-HHHHhhcccccCCCCCcEEehHHHhhhcccC
Confidence 11 1 1 12367899999999776 5999999554 43333211
Q ss_pred cccCCCChHHHHHHHHHcCCchhhHHH--HHHHHHHHHHHHHHHHHHHHhC-CCeeec--C--CccEEEEEecCcccccC
Q 037587 300 SSFGLVSSQTQYLLSRMLSDKKFTCNY--MKENRKRLRKRKEMLVSGLKVA-GIRCLK--S--NAGLFCWVDMRHLLVSN 372 (464)
Q Consensus 300 ~~~~~~s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~--~--~~g~f~~~~l~~~~~~~ 372 (464)
..+++.+...+.++..+++.. .+. +++.++.++++++++.+.|+++ |+++.. + .+++++|++++....
T Consensus 270 ~~~~t~~~~~~~a~~~al~~~---~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 344 (398)
T 2fyf_A 270 QTYNTPAIATLALLAEQIDWL---VGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVD-- 344 (398)
T ss_dssp CCSSCCCHHHHHHHHHHHHHH---HHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSC--
T ss_pred CCCCCCCHHHHHHHHHHHHHH---HHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCC--
Confidence 123445566666666666421 222 6677888888999999999988 888763 3 356689999864211
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..+++..|. ++||.+++|. ...+.+++||+++. .+++++++++++|++++++
T Consensus 345 ----~~~l~~~L~-~~gI~v~~g~--~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 345 ----AGTVAKILR-ANGIVDTEPY--RKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp ----HHHHHHHHH-HTTCBCCSCC--TTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHH-HCCcEEecCc--ccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 235667765 5599999873 22235789999986 6899999999999998765
No 174
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.95 E-value=4.1e-26 Score=232.72 Aligned_cols=354 Identities=13% Similarity=0.049 Sum_probs=220.0
Q ss_pred CCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccc-cCCCCCCcHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELA-LFQDYHGFPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+|||..+ .|++. +|.+.+++.+... ... .|....+..+.+.++++.+.+..+
T Consensus 48 ~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~-------------~~~~~~~~~~~~~~~~~~lae~l~~~~~- 113 (472)
T 3hmu_A 48 WLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMR-------------ELPYYNTFFKTTHVPAIALAQKLAELAP- 113 (472)
T ss_dssp EEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHH-------------HCSCCCSSSSEECHHHHHHHHHHHHHSC-
T ss_pred EEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHH-------------hccccccccccCCHHHHHHHHHHHHhCC-
Confidence 3344456678999877 66664 5677777666422 111 233333446677777777766543
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCeEEEcCCCCCChhhhcccCCCc-----------EEEEEecC
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLAD--------PGDAFLLPTPYYPGFDRDLKWRPGV-----------EIVPIHCS 164 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~~g~-----------~~~~v~~~ 164 (464)
...++|++++|+++++..+++++.. +++.|++.+|+|+++...+....|. .+..++.+
T Consensus 114 ---~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p 190 (472)
T 3hmu_A 114 ---GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQP 190 (472)
T ss_dssp ---TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCC
T ss_pred ---CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCC
Confidence 4567999999999999999998864 4689999999998876443322121 23344422
Q ss_pred C--C-CCcccC--------HHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 165 S--S-NGFRIT--------ISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 165 ~--~-~~~~~d--------~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
. . +++ .+ ++.|++.+.+.. ..++++|++..++|++|.+. +.+.+++|.++|+++|+++|+||+|.
T Consensus 191 ~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~ 267 (472)
T 3hmu_A 191 NWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVIC 267 (472)
T ss_dssp CHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT
T ss_pred ccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 1 0 111 23 677887776421 12555555544467777755 88889999999999999999999999
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh----cccCCCChH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM----SSFGLVSSQ 308 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~----~~~~~~s~~ 308 (464)
++...+. . .. .+... ..+.++ +|||++|..|+|+||++++ +.+.+.+... ...+..+++
T Consensus 268 gfgr~G~--~-~a-~~~~~---------v~pdi~---t~sK~l~gg~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~ 330 (472)
T 3hmu_A 268 GFGRTGN--W-FG-TQTMG---------IRPHIM---TIAKGLSSGYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPV 330 (472)
T ss_dssp TTTTTSS--S-CH-HHHHT---------CCCSEE---EECGGGTTTSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHH
T ss_pred CCcccCc--c-ch-hHHhC---------CCCcee---eechhhhcCCcceEEEEEC-HHHHHhcccCCccccCCCCCCHH
Confidence 8533332 1 11 12211 112333 7899998445999999994 5555555311 112346788
Q ss_pred HHHHHHHHcCCchhhHHHHHHHHHHHH-HHHHHHHHHHHh---C-CCeeecCCccEEEEEecCcccccC-C-----hhHH
Q 037587 309 TQYLLSRMLSDKKFTCNYMKENRKRLR-KRKEMLVSGLKV---A-GIRCLKSNAGLFCWVDMRHLLVSN-T-----FEAE 377 (464)
Q Consensus 309 ~q~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~---~-g~~~~~~~~g~f~~~~l~~~~~~~-~-----~~~~ 377 (464)
+++++.++|+..+- +...+.++ ++.+++.+.|++ + .+...++.|. |+++++....... . ....
T Consensus 331 a~aAa~aaL~~~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~-~~~i~~~~~~~~~~~~~~~~~~~~ 404 (472)
T 3hmu_A 331 AAAVALENLRILEE-----ENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGM-MASIALTPNKASRAKFASEPGTIG 404 (472)
T ss_dssp HHHHHHHHHHHHHH-----TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETT-EEEEEECSCGGGTCCBSSCTTHHH
T ss_pred HHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eEEEEEecCccccccccchhHHHH
Confidence 99888888763211 11223333 344444444443 3 2344455554 7777775321110 0 1113
Q ss_pred HHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 378 KELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+++..++ ++||+++|+. +++||++.. .+++++++++++|++++++..
T Consensus 405 ~~~~~~l~-~~Gv~v~~~g-------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 405 YICRERCF-ANNLIMRHVG-------DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHH-HTTBCCEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCcEEEecC-------CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35666665 6799999862 689999654 699999999999999987664
No 175
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.94 E-value=1.2e-26 Score=231.31 Aligned_cols=329 Identities=12% Similarity=0.128 Sum_probs=212.5
Q ss_pred CCCCCCCceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCC-CCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 30 DQLHNPSGIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQ-DYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 30 ~~~~~~~~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
....+..++++|+.+.+.+++ .+.+++.+... ...|+ +..+..++|+++|++++ .
T Consensus 16 ~~~~~~~~~~~l~~~~p~~~~-~~~~a~~~~~~--------------~~~~~~~~~~~~~l~~~la~~~~--------~- 71 (391)
T 3dr4_A 16 YFQGHMSDLPRISVAAPRLDG-NERDYVLECMD--------------TTWISSVGRFIVEFEKAFADYCG--------V- 71 (391)
T ss_dssp ------------CCCCCCCCS-SHHHHHHHHHH--------------HTCCSSCSHHHHHHHHHHHHHHT--------C-
T ss_pred hhhhhcCCCceeccCCCCCCH-HHHHHHHHHHH--------------cCCccCCChHHHHHHHHHHHHhC--------C-
Confidence 333445678899988877664 34444443211 12455 55678999999999986 2
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
+++++++|+++++..++.++ +++||+|+++.|+|+.+...+... |++++.+++++ +++.+|++.+++.+++
T Consensus 72 -~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~d~~~l~~~~~~----- 143 (391)
T 3dr4_A 72 -KHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYC-GATPVLVDNDP-RTFNLDAAKLEALITP----- 143 (391)
T ss_dssp -SEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHT-TCEEEEECBCT-TTCSBCGGGSGGGCCT-----
T ss_pred -CcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHHHHHHC-CCEEEEEecCc-cccCcCHHHHHHhcCC-----
Confidence 27888999999999999999 899999999999999998888877 99999999875 3578999999987753
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEE
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHI 267 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~ 267 (464)
++++|+ |+||||...+ +++|.++|+++|+++|+|++|+....... .....+ . .+.
T Consensus 144 -~~~~v~---~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~----~~~~~~-------------~-di~ 198 (391)
T 3dr4_A 144 -RTKAIM---PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRG----KKSGSL-------------G-DCA 198 (391)
T ss_dssp -TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT----EETTSS-------------S-SEE
T ss_pred -CceEEE---EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECC----eeeccc-------------C-CEE
Confidence 777766 5689999865 67788889999999999999984222111 111001 1 255
Q ss_pred EcCCC--cCCCCCccEEEEEEecCHHHHHHHHHhcccC----------------CCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 268 VYSLS--KDFSMPGFRVGMIYSNNERVVSAATKMSSFG----------------LVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 268 l~S~S--K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----------------~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
+.||| |.+ +|.+.|+++++++.+.+.+......+ ..+.+..++....+ +.+++
T Consensus 199 ~~S~s~~K~l--~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~-------~~~~~ 269 (391)
T 3dr4_A 199 TFSFFGNAII--TTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQL-------ERVDE 269 (391)
T ss_dssp EEECBTTSSS--CCBSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHH-------HTHHH
T ss_pred EEECCCCCcC--CcCCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHH-------HHHHH
Confidence 67766 766 44579999987777766655443221 12222222222111 12344
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeeecC------Ccc-EEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCC---C
Q 037587 330 NRKRLRKRKEMLVSGLKVAGIRCLKS------NAG-LFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSC---H 399 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~~g~~~~~~------~~g-~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f---~ 399 (464)
..+..++..+++.+.|.+.|+.+..+ ..+ +.+++.++.... ....++...| .++||.++++... .
T Consensus 270 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~l~~~L-~~~GI~v~~~~~p~~~~ 344 (391)
T 3dr4_A 270 HLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLS----TTRDQVIKDL-DALGIESRPVFHPMHIM 344 (391)
T ss_dssp HHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCS----SCHHHHHHHH-HHTTCCCEECCCCGGGS
T ss_pred HHHHHHHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccc----hhHHHHHHHH-HHCCCceeecCCccccC
Confidence 44555666677888888777776544 122 234666664200 1122466666 4679999987521 0
Q ss_pred C--------C-------CCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 400 C--------N-------EPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 400 ~--------~-------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+ . ..+.+||++.. .++++++.++++|++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 345 PPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp GGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 0 0 12469999977 79999999999998754
No 176
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=2.7e-26 Score=227.07 Aligned_cols=323 Identities=13% Similarity=0.129 Sum_probs=217.8
Q ss_pred ceEEeecccccccHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeC
Q 037587 37 GIIQMGLAENQLSFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTA 116 (464)
Q Consensus 37 ~~i~l~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~ 116 (464)
.+++|+.+.+.+.. +.+++.+... ...|.+..+..+++++++++++ .+++++++
T Consensus 7 ~~~~l~~~~~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~~l~~~la~~~~----------~~~~~~~~ 60 (374)
T 3uwc_A 7 PYSYLERQFADIEP--YLNDLREFIK--------------TADFTLGAELEKFEKRFAALHN----------APHAIGVG 60 (374)
T ss_dssp CSCCHHHHTSSCHH--HHHHHHHHHH--------------HTCCSSCHHHHHHHHHHHHHTT----------CSEEEEES
T ss_pred eeeccccCCCCchH--HHHHHHHHHH--------------cCCcccChhHHHHHHHHHHHhC----------CCcEEEeC
Confidence 45788887776655 5665555321 1246666678999999999975 23788999
Q ss_pred ChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEE
Q 037587 117 GSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLI 195 (464)
Q Consensus 117 G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil 195 (464)
|+++++..++.++ +++||+|+++.|+|+.+...+... |++++.++.+ .++.+|++++++.+++ ++++|+
T Consensus 61 ~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~-g~~~~~~~~~--~~~~~d~~~l~~~~~~------~~~~v~- 130 (374)
T 3uwc_A 61 TGTDALAMSFKMLNIGAGDEVITCANTFIASVGAIVQA-GATPVLVDSE--NGYVIDPEKIEAAITD------KTKAIM- 130 (374)
T ss_dssp CHHHHHHHHHHHTTCCTTCEEEEESSSCHHHHHHHHHT-TCEEEEECBC--TTSSBCGGGTGGGCCT------TEEEEC-
T ss_pred CHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-CCEEEEEecC--CCCCcCHHHHHHhCCC------CceEEE-
Confidence 9999999999999 999999999999999998888877 9999999987 4678899999987754 677666
Q ss_pred eCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC--
Q 037587 196 TNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS-- 272 (464)
Q Consensus 196 ~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S-- 272 (464)
|+||||...+ +++|.++|+++|+++|+||+|.... +... .... -..+++.|+|
T Consensus 131 --~~n~~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~~~-----~~~~--------------~~d~~~~s~~~~ 186 (374)
T 3uwc_A 131 --PVHYTGNIAD---MPALAKIAKKHNLHIVEDACQTILGRINDK-----FVGS--------------WGQFACFSLHPL 186 (374)
T ss_dssp --CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTE-----ETTS--------------SSSEEEEECSSS
T ss_pred --EeCCcCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeCCe-----eccc--------------cccEEEEeCCCC
Confidence 8899999875 7778888999999999999998532 2211 1100 1235677866
Q ss_pred cCCCCCccEEEEEEecCHHHHHHHHHhcccC--------------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHH
Q 037587 273 KDFSMPGFRVGMIYSNNERVVSAATKMSSFG--------------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRK 338 (464)
Q Consensus 273 K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~--------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (464)
|.+|.+|. .|+++++++.+.+.+....... ..+.+...+....+. . +++..++.++..
T Consensus 187 K~l~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~---~----~~~~~~~~~~~~ 258 (374)
T 3uwc_A 187 KNLNVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMN---Q----LETITEKRRGIA 258 (374)
T ss_dssp SSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGG---G----HHHHHHHHHHHH
T ss_pred CcCCccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHH---H----HHHHHHHHHHHH
Confidence 99984475 8999987777766655543210 123333333222221 1 333444555666
Q ss_pred HHHHHHHHhCC--Ceeec-CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC--------------C
Q 037587 339 EMLVSGLKVAG--IRCLK-SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC--------------N 401 (464)
Q Consensus 339 ~~l~~~l~~~g--~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~--------------~ 401 (464)
+++.+.|.+.+ +.+.. +.++...|..++-.. .+..++...| .++||.++++..... .
T Consensus 259 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~ 332 (374)
T 3uwc_A 259 HLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRV-----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGD 332 (374)
T ss_dssp HHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEE-----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTS
T ss_pred HHHHHHhccCCCeEEeccCCCCCceeeEEEEEEc-----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCC
Confidence 77788887764 55432 222222221111000 0122455555 567999998752110 0
Q ss_pred -------CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 402 -------EPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 402 -------~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..+.+||++.. .+++++++++++|++++++.+
T Consensus 333 ~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 333 FPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLEKH 372 (374)
T ss_dssp CHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTTT
T ss_pred CccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 01579999877 799999999999999997653
No 177
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=9.6e-26 Score=226.79 Aligned_cols=306 Identities=13% Similarity=0.162 Sum_probs=203.7
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCc
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
.+|++..|..++++.+.+.+.+.+| ++ ++++++++++++..++.++ +++||.|+++.|+|..+...+... |+
T Consensus 32 ~~~~~~~g~~~l~~~l~~~la~~~g----~~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 104 (418)
T 2c81_A 32 AISGYWTGEESMERKFAKAFADFNG----VP--YCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATAVLNV-NA 104 (418)
T ss_dssp STTSBCCSSCCHHHHHHHHHHHHHT----CS--EEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TC
T ss_pred cccCcccCCHHHHHHHHHHHHHHhC----CC--cEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHHHHHc-CC
Confidence 3477666755555555555554444 33 4666777789999999999 899999999999999998888876 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV- 235 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~- 235 (464)
+++.+++++ ++|.+|++.+++.+++ ++++|+++ ||||... ++++|.++|+++|+++|+||+|+.+.
T Consensus 105 ~~~~~~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~---~~~~i~~~~~~~~~~li~D~a~~~~~~ 171 (418)
T 2c81_A 105 LPVFVDVEA-DTYCIDPQLIKSAITD------KTKAIIPV---HLFGSMA---NMDEINEIAQEHNLFVIEDCAQSHGSV 171 (418)
T ss_dssp EEEEECBCT-TTCSBCHHHHGGGCCT------TEEEECCB---CCTTCCC---CHHHHHHHHHHTTCEEEEECTTCTTCE
T ss_pred EEEEEecCC-CCCCcCHHHHHHhhCC------CCeEEEEe---CCcCCcc---cHHHHHHHHHHCCCEEEEECcccccCc
Confidence 999999864 3678999999987753 78887765 5899874 57888899999999999999999754
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC--CcCCCCCccEEEEEEecCHHHHHHHHHhcccC----------
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL--SKDFSMPGFRVGMIYSNNERVVSAATKMSSFG---------- 303 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~--SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~---------- 303 (464)
+.+. .+..+ . .+++.|| ||.+|. | |+||++++++.+.+.+.......
T Consensus 172 ~~~~-----~~~~~-------------~-~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 230 (418)
T 2c81_A 172 WNNQ-----RAGTI-------------G-DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSEL 230 (418)
T ss_dssp ETTE-----ETTSS-------------S-SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGC
T ss_pred cCCE-----ecccc-------------c-ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCcccccccccc
Confidence 3322 11111 1 2567777 999995 8 99999996666655554332211
Q ss_pred ---CC------C--------hHHHHHHH-HHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-cCCc-cEE--
Q 037587 304 ---LV------S--------SQTQYLLS-RMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL-KSNA-GLF-- 360 (464)
Q Consensus 304 ---~~------s--------~~~q~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~-g~f-- 360 (464)
.. . ...+.++. ..+. .+++..+..++.++++.+.|.++ |+++. ++++ +.+
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 303 (418)
T 2c81_A 231 MHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ-------ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY 303 (418)
T ss_dssp CTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT-------THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred ccchhhccccccccCcCCCcCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence 00 0 11122211 1121 13444455556677888888887 78776 4555 222
Q ss_pred -EE-EecCcccccCChhHHHHHHHHHHHhcCeE---EeCCCCCCC---------------------------CC------
Q 037587 361 -CW-VDMRHLLVSNTFEAEKELWKKIIFEVGLN---ISPGSSCHC---------------------------NE------ 402 (464)
Q Consensus 361 -~~-~~l~~~~~~~~~~~~~~l~~~ll~~~gI~---v~pg~~f~~---------------------------~~------ 402 (464)
++ +.++.... .. ....++...|.+++||. ++++..... ..
T Consensus 304 ~~~~~~~~~~~~-~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (418)
T 2c81_A 304 YGYVFRFDPVKF-GG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERA 381 (418)
T ss_dssp SEEEEEECGGGT-TT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHH
T ss_pred EEEEEEEccccc-cc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHH
Confidence 22 66653100 00 11235667765444999 888752100 00
Q ss_pred -CCeEEEEeec-C-CHHHHHHHHHHHHHHHHhhC
Q 037587 403 -PGWFRICFAN-I-TEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 403 -~~~~Ris~~~-~-~~e~l~~~l~~l~~~l~~~~ 433 (464)
.+.+||++.. . ++++++.++++|++++++.+
T Consensus 382 ~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 382 SGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp HHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred HhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 1479999976 7 89999999999999987643
No 178
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-26 Score=237.87 Aligned_cols=312 Identities=10% Similarity=0.092 Sum_probs=222.6
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC-----CC---CeEEEcCCCCCChhhhcc
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD-----PG---DAFLLPTPYYPGFDRDLK 151 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~-----~g---d~Vlv~~p~y~~~~~~~~ 151 (464)
|....|..++++.+++++.+.+| .+.+++++++|+|+++++..++.++.+ +| |.|+++.|+|..+...+.
T Consensus 99 ~~~~~~~~~l~~~~~~~la~~~g--~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~ 176 (497)
T 3mc6_A 99 PDVFPAVRKMESEVVSMVLRMFN--APSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAY 176 (497)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTT--CCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHH
T ss_pred cccChHHHHHHHHHHHHHHHHhC--CCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHH
Confidence 44445667888899998888876 223378999999999999999999865 46 899999999999988888
Q ss_pred cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.. |++++.+++++ +++.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|
T Consensus 177 ~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~ 245 (497)
T 3mc6_A 177 YF-GMKLRHVELDP-TTYQVDLGKVKKFINK------NTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCL 245 (497)
T ss_dssp HS-CCEEEEECBCT-TTCSBCTTTTGGGCCS------SEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTT
T ss_pred Hc-CCeEEEEecCc-ccCcCCHHHHHHHHhh------CCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcc
Confidence 77 99999999875 3678999999988754 7899999999999999976 667888899999999999999
Q ss_pred cccccC--CC-CC-CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCC--
Q 037587 232 SGTVFD--SP-SS-SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLV-- 305 (464)
Q Consensus 232 ~~~~~~--~~-~~-~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~-- 305 (464)
+++... .. +. ..+.+. . ...+..+++.|++|.++ +|.++||++++++.+..........+..
T Consensus 246 ~~~~~~f~~~~~~~~~~~~~-~----------~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (497)
T 3mc6_A 246 GSFIVSFMEKAGYKNLPLLD-F----------RVPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNPAWTGGL 313 (497)
T ss_dssp THHHHGGGTTTTCCSCCCCS-T----------TSTTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBTTCTTSC
T ss_pred hhhhhhhhhhhcccCCcccc-c----------cCCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccccccCCC
Confidence 864321 10 00 000110 1 02245677889999874 7888999999776554321111111100
Q ss_pred ----------C---hHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC--CCeee-cCCccEEEEEecCccc
Q 037587 306 ----------S---SQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA--GIRCL-KSNAGLFCWVDMRHLL 369 (464)
Q Consensus 306 ----------s---~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g~~~~-~~~~g~f~~~~l~~~~ 369 (464)
+ ..++.++...+... .+++..+.+.++++++.+.|.+. |+++. ++.++ ++++..+.
T Consensus 314 ~~~~~~~g~~~~~~~~a~~aal~~l~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v~~~~~~-- 385 (497)
T 3mc6_A 314 YGSPTLAGSRPGAIVVGCWATMVNMGEN-----GYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VISFSSKT-- 385 (497)
T ss_dssp BCCSSSCSSCBHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EEEEECTT--
T ss_pred cCCcCcccCCcchhHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EEEEeCCC--
Confidence 0 23345554444332 34556667777888999999984 88876 45565 44455432
Q ss_pred ccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCcc
Q 037587 370 VSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 370 ~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
.+..++...|. ++||.++++.. +..+|++++..+++++++++++|++++++.+..
T Consensus 386 -----~~~~~l~~~L~-~~Gi~v~~~~~-----~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 386 -----LNIHELSDRLS-KKGWHFNALQK-----PVALHMAFTRLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp -----TTHHHHHHHHH-TTTCBCEECCS-----SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred -----CCHHHHHHHHH-hCCEEEecCCC-----CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11234666664 67999886643 346899998778999999999999999887643
No 179
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.94 E-value=1.8e-25 Score=227.26 Aligned_cols=332 Identities=10% Similarity=0.045 Sum_probs=203.4
Q ss_pred CCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.....+|||+.+. +++ +++.+.+++.+.. .....| .+..++++++++++.+.++ .
T Consensus 54 ~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~-------------~~~~~~---~~~~~~~~~la~~l~~~~~-----~ 112 (453)
T 2cy8_A 54 VDGNVYLDFFGGHGALVLGHGHPRVNAAIAEAL-------------SHGVQY---AASHPLEVRWAERIVAAFP-----S 112 (453)
T ss_dssp TTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHH-------------TTTCSS---CSSCHHHHHHHHHHHHHCT-----T
T ss_pred CCCCEEEECcccHhhcccCCCCHHHHHHHHHHH-------------HhCCCC---CCCCHHHHHHHHHHHhhCC-----C
Confidence 3455789998875 433 4566777766642 111123 2457899999999987642 5
Q ss_pred CCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhcccC----------CCcE------EEEEecCCCCCc
Q 037587 109 PNKLVLTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLKWR----------PGVE------IVPIHCSSSNGF 169 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~~----------~g~~------~~~v~~~~~~~~ 169 (464)
+++|++|+|+++++..++++ +.+ ++.|++.+|+|+++...+... .|+. ++.++.
T Consensus 113 ~~~v~~~~gg~eA~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 185 (453)
T 2cy8_A 113 IRKLRFTGSGTETTLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP------ 185 (453)
T ss_dssp CSEEEEESCHHHHHHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT------
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC------
Confidence 78999999999999999988 665 467888889998765433211 1221 223321
Q ss_pred ccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchh
Q 037587 170 RITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIM 247 (464)
Q Consensus 170 ~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~ 247 (464)
.|+++|++.+++. ++++++ ++++| +||||.++ +.+++++|.++|++||+++|+||+|.++ ..+. . .. .
T Consensus 186 -~d~~~le~~l~~~---~~~~~~-vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~--~-~~-~ 255 (453)
T 2cy8_A 186 -DDIEGMREVFANH---GSDIAA-FIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN--H-GM-Q 255 (453)
T ss_dssp -TCHHHHHHHHHHH---GGGEEE-EEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT--T-HH-H
T ss_pred -CCHHHHHHHHHhc---CCCEEE-EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc--h-hh-h
Confidence 3789999988742 125655 55666 47799765 6999999999999999999999999975 3222 1 11 1
Q ss_pred hhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-------hcccCCCChHHHHHHHHHcCC-
Q 037587 248 EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-------MSSFGLVSSQTQYLLSRMLSD- 319 (464)
Q Consensus 248 ~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~- 319 (464)
+... .... +.||||+++ +|+|+||+++++ .+.+.+.. ....+..+++++.++.++++.
T Consensus 256 ~~~~---------~~~d---i~s~sK~l~-~G~~~G~v~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~ 321 (453)
T 2cy8_A 256 ALLD---------VQPD---LTCLAKASA-GGLPGGILGGRE-DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTI 321 (453)
T ss_dssp HHHT---------CCCS---EEEEEGGGG-TTSSCEEEEECH-HHHTTSSSCC---------CCCCHHHHHHHHHHHHHH
T ss_pred HHhC---------CCCc---EEEEChhhh-CCcceEEEechH-HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHH
Confidence 1111 1122 339999998 699999999954 44443322 112234677888887776654
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCee-ecCCccEEEEEecCc-----c-----cc---cCChhHHHHHH
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRC-LKSNAGLFCWVDMRH-----L-----LV---SNTFEAEKELW 381 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~-~~~~~g~f~~~~l~~-----~-----~~---~~~~~~~~~l~ 381 (464)
. . +...+.++++++++.+.|++ +++.. .++.+ .|+|++++. . .. ........+++
T Consensus 322 ~-~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 394 (453)
T 2cy8_A 322 L-E-----DDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRF-SGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMR 394 (453)
T ss_dssp H-H-----TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCT-TEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHH
T ss_pred h-h-----hhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEee-eEEEEEEeccccccccccccccccccccHHHHHHHH
Confidence 1 0 11222333344444444433 34433 44554 588999874 1 00 00112234577
Q ss_pred HHHHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 382 KKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 382 ~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
..++ ++||.+.|+ +.+|+++. .+++++++++++|++++++..
T Consensus 395 ~~l~-~~Gv~v~~~--------~~~~l~~~-~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 395 MALI-LEGVDIGGR--------GSVFLSAQ-HEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp HHHH-HTTEECBTT--------TEEECCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HCCeEEeCC--------CCEEeecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 7776 579999653 23777644 699999999999999988764
No 180
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.94 E-value=2e-25 Score=225.63 Aligned_cols=338 Identities=15% Similarity=0.099 Sum_probs=211.5
Q ss_pred CCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||+.+. +++ +++.+.+++.+... ....|. +..++++.+++.+.+..+
T Consensus 49 ~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~-------------~~~~~~---~~~~~~~~l~~~la~~~~-- 110 (434)
T 2epj_A 49 YLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALA-------------RGWLYG---APGEAEVLLAEKILGYVK-- 110 (434)
T ss_dssp EEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHH-------------TCSCCS---SCCHHHHHHHHHHHHHHC--
T ss_pred EEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHH-------------hCCCCC---CCCHHHHHHHHHHHHhCC--
Confidence 33334456789998875 444 45667777666421 111121 234555556666555432
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhccc-------------CCCc------EEEEEe
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLKW-------------RPGV------EIVPIH 162 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~-------------~~g~------~~~~v~ 162 (464)
.+++|++|+|+++++..++++ +. +++.|++.+|+|+++...+.. ..|+ .++.++
T Consensus 111 ---~~~~v~~~~sgseA~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~ 186 (434)
T 2epj_A 111 ---RGGMIRFVNSGTEATMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTP 186 (434)
T ss_dssp ---TTCEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEE
T ss_pred ---CCCEEEEeCCHHHHHHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecC
Confidence 468999999999999999987 44 467888889999876543211 1132 244554
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
. .|++.|++.+++. +.++++ ++++| +||||.++ +.+.+++|.++|+++|+++|+||+|.++ ..+.
T Consensus 187 ~-------~d~~~le~~l~~~---~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~- 253 (434)
T 2epj_A 187 Y-------NDVEALERVFAEY---GDRIAG-VIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL- 253 (434)
T ss_dssp T-------TCHHHHHHHHHHH---GGGEEE-EEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-
T ss_pred C-------CCHHHHHHHHHhC---CCCEEE-EEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-
Confidence 3 2789999988752 125554 55566 57799876 6999999999999999999999999975 2222
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----cccCCCChHHHHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----SSFGLVSSQTQYLLSR 315 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~ 315 (464)
. .. .+... .... +.||||.+| +|+|+||++++ +.+.+.+... ...+..+++++.++.+
T Consensus 254 -~-~~-~~~~~---------~~~d---i~s~sK~l~-~G~~~G~v~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a 316 (434)
T 2epj_A 254 -E-GA-QGYFN---------IEGD---IIVLGKIIG-GGFPVGAVAGS-REVMSLLTPQGKVFNAGTFNAHPITMAAGLA 316 (434)
T ss_dssp -T-HH-HHHHT---------CCCS---EEEEEGGGG-TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHH
T ss_pred -c-hh-hHHhC---------CCCC---eeeecchhc-CCcceeeeeec-HHHHHhhccCCCcccCCCCCcCHHHHHHHHH
Confidence 1 11 11111 1122 349999999 59999999995 4454443331 1123467788877777
Q ss_pred HcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCee-ecCCccEEEEEecCccc-c------cCChhHHHHHHHH
Q 037587 316 MLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRC-LKSNAGLFCWVDMRHLL-V------SNTFEAEKELWKK 383 (464)
Q Consensus 316 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~-~~~~~g~f~~~~l~~~~-~------~~~~~~~~~l~~~ 383 (464)
+++..+ + +...+.++++++++.+.|+++ ++.. .++. |.|+|++++... . ........+++..
T Consensus 317 ~l~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (434)
T 2epj_A 317 TLKALE---E--EPVYSVSREAAKALEEAASEVLDRTGLPYTINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEE 390 (434)
T ss_dssp HHHHHH---H--SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHH---h--cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHH
Confidence 765321 1 123344445555555555543 5532 3444 458899886410 0 0011223457777
Q ss_pred HHHhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhh
Q 037587 384 IIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 384 ll~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~ 432 (464)
++ ++||.+.||.. .++|+++. .+++++++++++|++++++.
T Consensus 391 l~-~~Gv~v~~~~~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 391 ML-RRGVFIAPSNL------EAVFTGLP-HQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HH-HTTEECCSSTT------SCEECCTT-CSHHHHHHHHHHHHHHHHHH
T ss_pred HH-HCCeEEeccCC------CcEEEecc-CCHHHHHHHHHHHHHHHHHH
Confidence 65 67999998742 24777754 59999999999999998764
No 181
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.94 E-value=3.8e-25 Score=222.89 Aligned_cols=331 Identities=14% Similarity=0.087 Sum_probs=210.3
Q ss_pred CCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFD 108 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~ 108 (464)
.....+|||+.+. +++ +++.+.+++.+..+ ....|. +..++++.+++.+.+.++ .
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~-------------~~~~~~---~~~~~~~~l~~~l~~~~~-----~ 107 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLE-------------RGLTFG---APSPLEVALAKKVKRAYP-----F 107 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHH-------------TCSCCS---SCCHHHHHHHHHHHHHCT-----T
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHH-------------hCCCCC---CCCHHHHHHHHHHHHhCC-----C
Confidence 3455689998875 444 45677777666421 111221 335667777777766532 4
Q ss_pred CCcEEEeCChHHHHHHHHHH---hcCCCCeEEEcCCCCCChhhhccc-------------CCCc------EEEEEecCCC
Q 037587 109 PNKLVLTAGSTAANETLMFC---LADPGDAFLLPTPYYPGFDRDLKW-------------RPGV------EIVPIHCSSS 166 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~-------------~~g~------~~~~v~~~~~ 166 (464)
+++|++++|+++++..++++ +. +++.|++.+|+|+++...+.. ..|+ .++.++.
T Consensus 108 ~~~v~~~~~g~ea~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~--- 183 (424)
T 2e7u_A 108 VDLVRFVNSGTEATMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY--- 183 (424)
T ss_dssp CCEEEEESSHHHHHHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT---
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC---
Confidence 68999999999999999986 54 457899999999886543211 1132 2444442
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCC-CCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCcc
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNP-LGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFI 244 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NP-tG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~ 244 (464)
.|++.|++.+++. +.+++ +++++|+|+ ||.++ +.+.+++|.++ +++|+++|+||+|.++ ..+. .
T Consensus 184 ----~d~~~le~~l~~~---~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~--~-- 249 (424)
T 2e7u_A 184 ----NDPEGLREVLKRR---GEEIA-AIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF--G-- 249 (424)
T ss_dssp ----TCHHHHHHHHHHH---GGGEE-EEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST--T--
T ss_pred ----CCHHHHHHHHHhC---CCCEE-EEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch--h--
Confidence 2789999888642 12454 566678665 89765 78899999999 9999999999999975 2222 1
Q ss_pred chhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-----cccCCCChHHHHHHHHHcCC
Q 037587 245 SIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-----SSFGLVSSQTQYLLSRMLSD 319 (464)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-----~~~~~~s~~~q~~~~~~l~~ 319 (464)
...+... .... +.||||++| +|+|+||+++++ .+.+.+... ...+..+++++.++.++++.
T Consensus 250 ~~~~~~~---------~~~d---i~s~sK~l~-~G~~~G~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~ 315 (424)
T 2e7u_A 250 GATELLG---------LKPD---LVTLGKILG-GGLPAAAYAGRR-EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLEL 315 (424)
T ss_dssp HHHHHHT---------CCCS---EEEECGGGG-TTSSCEEEEECH-HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHhC---------CCcc---hhhhhhhhh-CCcceEEEEEcH-HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHH
Confidence 1111211 1122 239999999 699999999954 454444331 11234677888888777753
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCee-ecCCccEEEEEecCccc-c------cCChhHHHHHHHHHHHh
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRC-LKSNAGLFCWVDMRHLL-V------SNTFEAEKELWKKIIFE 387 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~-~~~~~g~f~~~~l~~~~-~------~~~~~~~~~l~~~ll~~ 387 (464)
.+ + .++..+.++++++++.+.|++ +++.. .++.| .|+|++++... . ........+++..++ +
T Consensus 316 ~~---~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 389 (424)
T 2e7u_A 316 LE---E-NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVG-SMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-D 389 (424)
T ss_dssp HH---H-CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEET-TEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-T
T ss_pred HH---h-ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeec-eEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-H
Confidence 21 1 123344455555555555554 35532 34444 58999987411 0 001122335777766 6
Q ss_pred cCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 388 VGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 388 ~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
+||.+.||.. ..+|+++. .+++++++++++|++++
T Consensus 390 ~Gv~v~~~~~------~~~~~~~~-~t~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 390 RGIYWPPSNF------EAAFLSVA-HREEDVEKTLEALRKAL 424 (424)
T ss_dssp TTEECCSSSS------SCEECCTT-CCHHHHHHHHHHHHHHC
T ss_pred CCeEEeccCC------CceEeecc-CCHHHHHHHHHHHHHhC
Confidence 8999998752 24777754 69999999999998763
No 182
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.94 E-value=9.2e-26 Score=230.14 Aligned_cols=292 Identities=11% Similarity=0.069 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCe---EEEcCCCCCChhh----hcccCCCcEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDA---FLLPTPYYPGFDR----DLKWRPGVEIV 159 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~---Vlv~~p~y~~~~~----~~~~~~g~~~~ 159 (464)
.++++.++++++ +++++|++|+|+++++.+++.+++++|+. |+++.|+|++... .++.. |+++.
T Consensus 114 ~~l~~~la~~~g--------~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~-G~~~~ 184 (465)
T 3e9k_A 114 ESIVGLMKDIVG--------ANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLH-GLNIE 184 (465)
T ss_dssp HHHHGGGHHHHT--------CCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHT-TCCHH
T ss_pred HHHHHHHHHHcC--------CCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHc-CCcce
Confidence 567888888775 67899999999999999999999877655 9999999987433 44445 77642
Q ss_pred -----EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 160 -----PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 160 -----~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
..+. ++++.+|++++++.+++. ++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.
T Consensus 185 ~~~v~~~~~--~~~~~~d~~~l~~~i~~~---~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~- 255 (465)
T 3e9k_A 185 ESMRMIKPR--EGEETLRIEDILEVIEKE---GDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV- 255 (465)
T ss_dssp HHEEEECCC--TTCSSCCHHHHHHHHHHH---GGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT-
T ss_pred eeeEEEecC--CCCCccCHHHHHHHHHhc---CCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc-
Confidence 2233 346778999999999742 237899999999999999987 56788889999999999999973
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-hcc------------
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-MSS------------ 301 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-~~~------------ 301 (464)
+.. + .++..+ +..+++.|++|.++....++|+++++++.+ +.+.. ...
T Consensus 256 --g~~--~-~~~~~~-------------~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~-~~~~~~~~g~~~~~~~~~~~~ 316 (465)
T 3e9k_A 256 --GNV--E-LYLHDW-------------GVDFACWCSYKYLNAGAGGIAGAFIHEKHA-HTIKPALVGWFGHELSTRFKM 316 (465)
T ss_dssp --TTS--C-CCHHHH-------------TCCEEEECSSSTTCCCTTCCCEEEECGGGT-TTSCCSSCCGGGBCHHHHTTC
T ss_pred --CCc--C-Cchhhc-------------CCCEEEECcccccccCCCceEEEEEcHHHH-hhcCCcccCccCCCCCccccc
Confidence 222 1 222222 455788999999931223789998854432 11110 000
Q ss_pred --------------cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh-----------CCCeeecCC
Q 037587 302 --------------FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV-----------AGIRCLKSN 356 (464)
Q Consensus 302 --------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----------~g~~~~~~~ 356 (464)
.++.+.+...++.+++.... ...+++.++.+.+.++++.+.|++ .|+++..+.
T Consensus 317 ~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~ 394 (465)
T 3e9k_A 317 DNKLQLIPGVCGFRISNPPILLVCSLHASLEIFK--QATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPS 394 (465)
T ss_dssp CSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCS
T ss_pred CCCcCcCCChHHhccCCccHHHHHHHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCC
Confidence 01344444555555544211 112677778888888889998887 578887665
Q ss_pred ----ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHH
Q 037587 357 ----AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 357 ----~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~ 430 (464)
.|.++++.++. ... ++...|. ++||.++.. .++++|+++ .. .++++++++++.|+++++
T Consensus 395 ~~~~~g~~~~~~~~~--~~~------~l~~~L~-~~Gi~v~~~------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~ 459 (465)
T 3e9k_A 395 HVEERGCQLTITFSV--PNK------DVFQELE-KRGVVCDKR------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILD 459 (465)
T ss_dssp SGGGBCSCEEEEECC--TTC------CHHHHHH-TTTEECEEE------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHT
T ss_pred CHhhcccEEEEEecC--CHH------HHHHHHH-HCCEEEecC------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHH
Confidence 25588888862 222 2556654 679998732 367999998 34 689999999999999986
Q ss_pred hh
Q 037587 431 SC 432 (464)
Q Consensus 431 ~~ 432 (464)
+.
T Consensus 460 ~~ 461 (465)
T 3e9k_A 460 SA 461 (465)
T ss_dssp C-
T ss_pred hc
Confidence 54
No 183
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=3.2e-25 Score=219.26 Aligned_cols=293 Identities=13% Similarity=0.064 Sum_probs=204.2
Q ss_pred CCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChhhhcccCCCcEEE
Q 037587 83 YHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL---ADPGDAFLLPTPYYPGFDRDLKWRPGVEIV 159 (464)
Q Consensus 83 ~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~ 159 (464)
.....+++++++++++ .+ ++++|+|+++++..++.++ +++||+|+++.|+|+.+...+... |++++
T Consensus 31 ~~~~~~l~~~la~~~~--------~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~ 99 (375)
T 2fnu_A 31 GKRSLLFEEALCEFLG--------VK--HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLES-GYTPV 99 (375)
T ss_dssp SHHHHHHHHHHHHHHT--------CS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHT-TCEEE
T ss_pred ChHHHHHHHHHHHHhC--------CC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHC-CCEEE
Confidence 3456899999999985 33 8999999999999999999 899999999999999998888776 99999
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCC
Q 037587 160 PIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 160 ~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~ 239 (464)
.+++++++ .+|++.+++.+.+ ++++|++++| ||.+.+ +++|.++|+++|+++|+||+|+...+...
T Consensus 100 ~~~~~~~~--~~d~~~l~~~i~~------~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~~~ 165 (375)
T 2fnu_A 100 FAGIKNDG--NIDELALEKLINE------RTKAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLSDSSHALGSEYQN 165 (375)
T ss_dssp ECCBCTTS--SBCGGGSGGGCCT------TEEEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEETT
T ss_pred EeccCCCC--CCCHHHHHhhcCc------CceEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEEECccccCCeECC
Confidence 99987532 6899999887753 7888888866 999876 67788889899999999999984322111
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCC--cCCCCCccEEEEEEe-cCHHHHHHHHHhccc--------------
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS--KDFSMPGFRVGMIYS-NNERVVSAATKMSSF-------------- 302 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S--K~~g~~GlRiG~l~~-~~~~~~~~~~~~~~~-------------- 302 (464)
.. +. ..+ .+++.||| |.+|. | +|++++ +++.+.+.+......
T Consensus 166 ----~~----~~---------~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
T 2fnu_A 166 ----KK----VG---------GFA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKS 224 (375)
T ss_dssp ----EE----TT---------SSS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESS
T ss_pred ----ee----cc---------ccC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCcccccccccccc
Confidence 11 11 112 36778888 99984 7 688777 446565555443211
Q ss_pred -C---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----Cc-cEEEEEecCcccccC
Q 037587 303 -G---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS----NA-GLFCWVDMRHLLVSN 372 (464)
Q Consensus 303 -~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~-g~f~~~~l~~~~~~~ 372 (464)
. .++.+...++...+ + ++++..+.++++++++.+.|+++ |+.+.++ .+ ++++|+.++...
T Consensus 225 ~~~~~~~~~~~~a~~~~~~---~----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (375)
T 2fnu_A 225 IGHNFRLNEIQSALGLSQL---K----KAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKF--- 294 (375)
T ss_dssp CCCBCCCCHHHHHHHHHHH---T----THHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGG---
T ss_pred ccccCCCCHHHHHHHHHHH---H----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccc---
Confidence 1 12333222222221 1 24556667777888999999987 7777654 12 345577776320
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCCC-------CC-------CC-----CCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGSS-------CH-------CN-----EPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~~-------f~-------~~-----~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.....++...| .++||.++.+.. |+ .. ..+++||+++. .++++++.++++|++++++.
T Consensus 295 -~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 295 -FTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp -GGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred -cchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 00223466666 567999983211 10 00 02579999986 68999999999999998765
Q ss_pred C
Q 037587 433 N 433 (464)
Q Consensus 433 ~ 433 (464)
+
T Consensus 373 ~ 373 (375)
T 2fnu_A 373 K 373 (375)
T ss_dssp C
T ss_pred c
Confidence 4
No 184
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.94 E-value=7.6e-26 Score=226.70 Aligned_cols=287 Identities=16% Similarity=0.169 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc----CCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW----RPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~~g~~~~~v~~ 163 (464)
..++++++.+.+..| .+++++++|+++++..++.+++++||.|+++.|+|+++...+.. . |++++.++.
T Consensus 81 p~~~~l~~~la~~~g------~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-g~~~~~v~~ 153 (414)
T 3ndn_A 81 PTVSVFEERLRLIEG------APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRW-GVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHHHT------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHT-TCEEEEECT
T ss_pred hHHHHHHHHHHHHHC------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHc-CcEEEEeCC
Confidence 344444444444333 35788999999999999999999999999999999987766543 5 999999986
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSF 243 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~ 243 (464)
+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....+..+
T Consensus 154 ~-------d~~~l~~ai~~------~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~---- 213 (414)
T 3ndn_A 154 D-------DLSQWERALSV------PTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQG---- 213 (414)
T ss_dssp T-------CHHHHHHHTSS------CCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCC----
T ss_pred C-------CHHHHHHhcCC------CCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCc----
Confidence 4 78999888754 7899999999999999976 77788899999999999999984322111
Q ss_pred cchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-cccC-CCChHHHHHHHHHcCCc
Q 037587 244 ISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-SSFG-LVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-~~~~-~~s~~~q~~~~~~l~~~ 320 (464)
. .+ +..+++.|+||.+|.+| +|+|+++++++.+.+.++.. ..+. ..++....++...++.
T Consensus 214 ~---~~-------------g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~- 276 (414)
T 3ndn_A 214 F---PL-------------GVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET- 276 (414)
T ss_dssp G---GG-------------TCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG-
T ss_pred h---hc-------------CCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH-
Confidence 1 11 34578999999999778 89999999665554344322 2222 2444444444433332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecCC----------------ccEEEEEecCcccccCChhHHHHHHH
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-CLKSN----------------AGLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
+..+.+...+++..+.+.|+++ ++. +..|. .|.++++.++.... .......+++.
T Consensus 277 ------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~-~~~~~~~~~~~ 349 (414)
T 3ndn_A 277 ------LAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED-VAKQRAFEVLD 349 (414)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG-GHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc-ccHHHHHHHHH
Confidence 3344455566777888888776 332 22221 35689999864200 00112223444
Q ss_pred HHHHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 383 KIIFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 383 ~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
.+ +..++.+.+|..+.. ..++++|||++. |+.+.+++.|++++
T Consensus 350 ~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 350 KM-RLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp HC-SSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred hC-ccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 43 345777777765432 135789999995 44556666666654
No 185
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.94 E-value=1.1e-24 Score=217.68 Aligned_cols=280 Identities=16% Similarity=0.164 Sum_probs=191.7
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~ 160 (464)
...++++.++++++ .+ +.++++++++++..++.+++++||.|+++.|+|+++...+ ... |++++.
T Consensus 66 ~~~~l~~~la~~~g--------~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~-g~~~~~ 134 (398)
T 1gc0_A 66 TLNLLEARMASLEG--------GE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEF-GVKLRH 134 (398)
T ss_dssp HHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGG-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------CC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHc-CCEEEE
Confidence 45678888888775 22 4455555579999999999999999999999999876654 445 999988
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+ |++.+++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....+. .
T Consensus 135 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~-~- 196 (398)
T 1gc0_A 135 VDMA-------DLQALEAAMTP------ATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQ-R- 196 (398)
T ss_dssp ECTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHC-C-
T ss_pred ECCC-------CHHHHHHhcCC------CCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccC-C-
Confidence 8753 78899888754 7899999999999999985 788899999999999999999864332 1
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhccc---CCCChHHHHHHHHH
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSSF---GLVSSQTQYLLSRM 316 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~~---~~~s~~~q~~~~~~ 316 (464)
.+ .+ +.++++.|+||.+|.+|.|+ ||++++++.+.+.+...... +..+++.+.++...
T Consensus 197 ----~~-~~-------------~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 1gc0_A 197 ----PL-EL-------------GADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRG 258 (398)
T ss_dssp ----GG-GG-------------TCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHH
T ss_pred ----ch-hh-------------CceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhc
Confidence 11 11 45688999999999899998 99998655454344433222 34677777777666
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------eeec----CCccEEEEEecCcccccCChhHH
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-I--------------RCLK----SNAGLFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~--------------~~~~----~~~g~f~~~~l~~~~~~~~~~~~ 377 (464)
++. +....+.+.++...+.+.|.+++ + .+.. ..++ ++.++++..
T Consensus 259 l~~-------~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~l~~~--------- 321 (398)
T 1gc0_A 259 IKT-------LNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGG-MIAFELKGG--------- 321 (398)
T ss_dssp HTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTT-EEEEEETTH---------
T ss_pred cch-------HHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCce-EEEEEECCC---------
Confidence 653 22333444555566666666541 1 1111 2355 555676521
Q ss_pred HHHHHHHHHhcCeEEeC---CCCCC------------C---------CCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 378 KELWKKIIFEVGLNISP---GSSCH------------C---------NEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~p---g~~f~------------~---------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
.+....++.+.|+.++. |+... . ..++++|||++. .++++++.+.++|+++
T Consensus 322 ~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 322 IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 12345667788888765 32100 0 114799999987 4566777777776653
No 186
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.94 E-value=5.8e-25 Score=221.88 Aligned_cols=340 Identities=12% Similarity=0.063 Sum_probs=203.2
Q ss_pred CCCCCCCCceEEeeccc--ccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAE--NQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~--n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+||++.+. |++ .+|.+.+++.+.... .....|+ .+.+..+++.+.+..+
T Consensus 46 ~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~-----------~~~~~~~-----~~~~~~la~~l~~~~~-- 107 (429)
T 4e77_A 46 YLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVER-----------GLSFGAP-----TEMEVKMAQLVTDLVP-- 107 (429)
T ss_dssp EEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT-----------CSCCSSC-----CHHHHHHHHHHHHHST--
T ss_pred EEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHh-----------CcccCCC-----CHHHHHHHHHHHhhCC--
Confidence 33344566789998775 444 356677766654211 0111232 2444445555444322
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCCCc-------------------EEEEEec
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRPGV-------------------EIVPIHC 163 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~g~-------------------~~~~v~~ 163 (464)
.+++|++|+|+++++..+++... .+++.|++.+++|+++...+....+. .+..++.
T Consensus 108 ---~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (429)
T 4e77_A 108 ---TMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY 184 (429)
T ss_dssp ---TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT
T ss_pred ---CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC
Confidence 47899999999999999998543 35678999999998765422111011 1122211
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCC--CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAM--THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~--s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.|+++|++.+++. +.++ ++++++|+||+|-.+ +.+.+++|.++|+++|+++|+||+|.++ ..+.
T Consensus 185 -------~d~~~le~~l~~~---~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~-- 250 (429)
T 4e77_A 185 -------NDLASVRQAFEQY---PQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL-- 250 (429)
T ss_dssp -------TCHHHHHHHHHHS---TTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT--
T ss_pred -------CCHHHHHHHHHhc---CCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc--
Confidence 1789999888641 2244 456678876655433 3455999999999999999999999975 2222
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-----hcccCCCChHHHHHHHHH
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-----MSSFGLVSSQTQYLLSRM 316 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-----~~~~~~~s~~~q~~~~~~ 316 (464)
. ...+... .... +.||||.+| +|+|+||++++ +.+.+.+.. ....++.+++++.++.++
T Consensus 251 ~--~~~~~~~---------~~pd---i~t~sK~~~-~G~~~G~~~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aa 314 (429)
T 4e77_A 251 A--GAQDYYH---------VIPD---LTCLGKIIG-GGMPVGAFGGR-REVMNALAPTGPVYQAGTLSGNPIAMAAGFAC 314 (429)
T ss_dssp T--CHHHHTT---------CCCS---EEEEEGGGG-TTSCCEEEEEC-HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHH
T ss_pred c--hHHHhcC---------CCCC---eeeeccccc-CCCCeEEEEEC-HHHHHHhccCCCccccCCCCCCHHHHHHHHHH
Confidence 1 1111211 1122 349999999 89999999994 445444432 122235778888887777
Q ss_pred cC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccC--------ChhHHHHHHHHHH
Q 037587 317 LS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSN--------TFEAEKELWKKII 385 (464)
Q Consensus 317 l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~--------~~~~~~~l~~~ll 385 (464)
++ +.++ .++.++..+..++.|.+.+..+++....+..|+|+|++++...... ......+++..++
T Consensus 315 l~~~~~~~~----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 390 (429)
T 4e77_A 315 LTEISQVGV----YETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML 390 (429)
T ss_dssp HHHHTSTTH----HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHhcCH----HHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH
Confidence 65 3332 3333333333334444444555554444445679999987531100 1112245677765
Q ss_pred HhcCeEEeCCCCCCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 386 FEVGLNISPGSSCHCNEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 386 ~~~gI~v~pg~~f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++||.++|+.. ..+|+++. .+++++++++++|++++++
T Consensus 391 -~~Gi~v~~~~~------~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 391 -EEGVYLAPSAF------EAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp -HTTEECCSSTT------SCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred -HCCeEEeecCC------CCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 56999998742 34677654 5999999999999998864
No 187
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.94 E-value=8.5e-26 Score=230.41 Aligned_cols=320 Identities=14% Similarity=0.190 Sum_probs=203.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CeEEEcCCCCCChhhh
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP-----G----DAFLLPTPYYPGFDRD 149 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~-----g----d~Vlv~~p~y~~~~~~ 149 (464)
.|.+..+..+|+++++++++ .+++++|+|+++++..++.+++++ | |.|++..+.|..+...
T Consensus 69 ~y~~~~~~~~l~~~la~~~~----------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~ 138 (467)
T 2oqx_A 69 AYSGSRSYYALAESVKNIFG----------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGH 138 (467)
T ss_dssp CSSSCHHHHHHHHHHHHHHC----------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHH
T ss_pred eeccCchhHHHHHHHHHHhC----------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhh
Confidence 57766677899999999984 368999999999999999999888 8 9988774333323333
Q ss_pred cccCCCcEEEEEec----CCC----CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC-CCCCCHHHHHHHHHHHhh
Q 037587 150 LKWRPGVEIVPIHC----SSS----NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL-GTAMTHQELNHLINFSKS 220 (464)
Q Consensus 150 ~~~~~g~~~~~v~~----~~~----~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt-G~~~s~~~l~~i~~~~~~ 220 (464)
.... |..++.... +.. ..+.+|+++|++++++.. .+++++|++++|+||| |.+++.+++++|.++|++
T Consensus 139 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~ 215 (467)
T 2oqx_A 139 SQIN-GCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKK 215 (467)
T ss_dssp HHHT-TCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHH
T ss_pred hhcc-CcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 3333 665554321 111 235689999999997521 1368899999999998 899999999999999999
Q ss_pred CCeEEEEeccccc----------cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCC-ccEEEEEEecC
Q 037587 221 KRIHIVSDEIYSG----------TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMP-GFRVGMIYSNN 289 (464)
Q Consensus 221 ~~~~lI~Deay~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~-GlRiG~l~~~~ 289 (464)
||+++|+|+++.. ..+.+. +...+..+.. ...+ +++.|+||.+|++ | ||+++++
T Consensus 216 ~gi~li~D~a~~~e~~~~~~~~~~~~~g~-----~~~~~~~~~~-----~~~d--~~~~s~sK~~g~~~G---g~~~~~~ 280 (467)
T 2oqx_A 216 YDIPVVMDSARFAENAYFIKQREAEYKDW-----TIEQITRETY-----KYAD--MLAMSAKKDAMVPMG---GLLCMKD 280 (467)
T ss_dssp TTCCEEEECTTHHHHHHHHHHHCGGGTTS-----CHHHHHHHHG-----GGCS--EEEEESSSTTCCSSC---EEEEECS
T ss_pred cCCEEEEEchhhhhhhhhcccccccccCc-----cHHHHhhhhh-----ccCC--eEEEecccccCCCCc---eEEEecC
Confidence 9999999965532 112222 2222210000 0112 3478999999877 5 8888865
Q ss_pred H---HHHHHHHHhc--c-----cCCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccE
Q 037587 290 E---RVVSAATKMS--S-----FGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGL 359 (464)
Q Consensus 290 ~---~~~~~~~~~~--~-----~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~ 359 (464)
+ .....++... . +...+.....++...+. .++. ++..+...++++++.+.|++.|+++. +.+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~--~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~ 354 (467)
T 2oqx_A 281 DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLY--DGMN---LDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGH 354 (467)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHH--HTTC---HHHHHHHHHHHHHHHHHHHHTTCCEE-EECSS
T ss_pred hhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhH--hhhh---HHHHHHHHHHHHHHHHHHHHCCCeee-cCCce
Confidence 5 2222232221 1 11122222222222211 1111 12223345667788888888788877 66778
Q ss_pred EEEEecCc---ccccCChhHHHHHHHHHHHhcCeEEeCCCCC--CC---------CCCCeEEEEeec--CCHHHHHHHHH
Q 037587 360 FCWVDMRH---LLVSNTFEAEKELWKKIIFEVGLNISPGSSC--HC---------NEPGWFRICFAN--ITEETLQVALQ 423 (464)
Q Consensus 360 f~~~~l~~---~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f--~~---------~~~~~~Ris~~~--~~~e~l~~~l~ 423 (464)
++|++++. ......+ ...+++..|+.++||.+.|+..| +. ...+++|++++. .++++++++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~ 433 (467)
T 2oqx_A 355 AAFVDAGKLLPHIPADQF-PAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIE 433 (467)
T ss_dssp CEEEEHHHHSTTSCGGGC-HHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHH
T ss_pred EEEEechhhcccCCcccc-cHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHH
Confidence 99998853 1111111 12345777757889999985532 11 013789999984 58999999999
Q ss_pred HHHHHHHhhC
Q 037587 424 RIKVFAQSCN 433 (464)
Q Consensus 424 ~l~~~l~~~~ 433 (464)
+|++++++.+
T Consensus 434 ~l~~~l~~~~ 443 (467)
T 2oqx_A 434 AFKHVKENAA 443 (467)
T ss_dssp HHHHHHHSGG
T ss_pred HHHHHHhhhh
Confidence 9999998754
No 188
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.94 E-value=2.9e-25 Score=221.16 Aligned_cols=278 Identities=14% Similarity=0.142 Sum_probs=190.9
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~ 160 (464)
...+|++++|++++ .+ ++++++++++++..++.+++++||.|+++.|+|+++... ++.. |++++.
T Consensus 60 ~~~~l~~~la~~~g--------~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g~~~~~ 128 (389)
T 3acz_A 60 TVEQFEEMVCSIEG--------AA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRF-GIEVDL 128 (389)
T ss_dssp HHHHHHHHHHHHHT--------CS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHhC--------CC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CCEEEE
Confidence 35688999998875 23 566666777999999999999999999999999976655 3545 999999
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++. .|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..+.+ ..
T Consensus 129 v~~-------~d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~-~~- 190 (389)
T 3acz_A 129 IDT-------SDVEKVKAAWKP------NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCF-LK- 190 (389)
T ss_dssp ECT-------TCHHHHHHTCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC-
T ss_pred ECC-------CCHHHHHHhcCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-cC-
Confidence 885 278898887754 7899999999999999986 77888889999999999999986432 12
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcc-cC-CCChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSS-FG-LVSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~l 317 (464)
++ .+ +.++++.|+||.+|.+|.|+ ||++++++.+.+.+..... ++ ..++..+.++...+
T Consensus 191 ----~~-~~-------------~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l 252 (389)
T 3acz_A 191 ----PL-EL-------------GADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGM 252 (389)
T ss_dssp ----GG-GT-------------TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred ----cc-cc-------------CCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc
Confidence 11 11 45688999999999899998 9999977344444443332 22 34566666666666
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC---------------Ceee----cCCccEEEEEecCcccccCChhHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG---------------IRCL----KSNAGLFCWVDMRHLLVSNTFEAEK 378 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g---------------~~~~----~~~~g~f~~~~l~~~~~~~~~~~~~ 378 (464)
+.. ....+...+....+.+.|++++ +.+. ...++ ++.+.++. .
T Consensus 253 ~~l-------~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~-~~~~~l~~---------~- 314 (389)
T 3acz_A 253 KTL-------PIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGS-TFLFEMKS---------F- 314 (389)
T ss_dssp TTH-------HHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCS-EEEEEESS---------H-
T ss_pred cHH-------HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCe-EEEEEECC---------H-
Confidence 542 1222333344455555555531 1111 11244 66677752 0
Q ss_pred HHHHHHHHhcCeEEeC---C------CCCCC---------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 379 ELWKKIIFEVGLNISP---G------SSCHC---------------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 379 ~l~~~ll~~~gI~v~p---g------~~f~~---------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
+....++.+.||.+++ | ..+.. ..++++|||++. ++.+.+++.|.++++
T Consensus 315 ~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 315 EAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp HHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 1345566778998876 3 22210 115799999985 366777777777764
No 189
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.94 E-value=2.3e-24 Score=217.21 Aligned_cols=282 Identities=15% Similarity=0.144 Sum_probs=192.5
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
..+++++++++++ .+ +.|++++|+ +++..++.+++++||.|+++.|+|+++... +... |++++.+
T Consensus 116 ~~~l~~~lA~l~g--------~~-~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~v~~v 184 (445)
T 1qgn_A 116 TVVLEEKISALEG--------AE-STLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKM-GITATVI 184 (445)
T ss_dssp HHHHHHHHHHHHT--------CS-EEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGG-TCEEEEE
T ss_pred HHHHHHHHHHHhC--------CC-cEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-CCEEEEe
Confidence 3588888888875 33 556666665 999999999999999999999999876653 4455 9999998
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCce-EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKV-KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~-~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+.+ |++++++++++ ++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+ ..
T Consensus 185 ~~~-------d~~~l~~ai~~------~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~-~~- 246 (445)
T 1qgn_A 185 DPA-------DVGALELALNQ------KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN-QK- 246 (445)
T ss_dssp CSS-------CHHHHHHHHHH------SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT-CC-
T ss_pred CCC-------CHHHHHHHhcc------CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc-CC-
Confidence 753 78999999876 67 99999999999999986 66788899999999999999985321 11
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh-cccCC-CChHHHHHHHHHc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM-SSFGL-VSSQTQYLLSRML 317 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~-~~~~~-~s~~~q~~~~~~l 317 (464)
. ..+ +..++++|+||.+|..| +++||++++++ +.+.+... ..+.. .+++...++...+
T Consensus 247 ----~-~~~-------------g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~~~l~~~~~~~g~~~~~~~a~~~~~~l 307 (445)
T 1qgn_A 247 ----A-LAL-------------GADLVLHSATKFLGGHNDVLAGCISGPLK-LVSEIRNLHHILGGALNPNAAYLIIRGM 307 (445)
T ss_dssp ----T-TTT-------------TCSEEEECTTTTTTCSSSCCCEEEEECHH-HHHHHHHHHHHHCCCCCHHHHHHHHHHG
T ss_pred ----c-ccc-------------CCEEEEECCcccccccccceEEEEEECHH-HHHHHHHHHHHhCCCCCHHHHHHHHHhH
Confidence 1 111 45578999999998554 47999999544 44444332 22332 3444444444444
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eeecC----------------CccEEEEEecCcccccCChhHHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCLKS----------------NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~----------------~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+. +..+.+.+.+++..+.+.|+++ ++ .+..| ..|.++++.++.. ......
T Consensus 308 ~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-----~~~~~~ 375 (445)
T 1qgn_A 308 KT-------LHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-----LLTTAK 375 (445)
T ss_dssp GG-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-----HHHHHH
T ss_pred HH-------HHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-----HHHHHH
Confidence 32 2333444555677788888876 44 34322 1344778888631 011222
Q ss_pred HHHHHHHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHHHh
Q 037587 380 LWKKIIFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~ 431 (464)
++..+ +..++.++.|+.+.. ..++.+|||++ .|+++.+++.|++++++
T Consensus 376 ~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG---~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 376 FVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG---VEDFDDLKADILQALDS 444 (445)
T ss_dssp HHHHC-SSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC---SSCHHHHHHHHHHHHHH
T ss_pred HHHhC-CCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec---cCCHHHHHHHHHHHHhh
Confidence 33322 223777777765421 12479999998 35799999999988864
No 190
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.93 E-value=1.8e-24 Score=215.64 Aligned_cols=281 Identities=17% Similarity=0.163 Sum_probs=194.4
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v 161 (464)
..+|++.||++++ .+++++++|+++++..++.+++++||+|+++.|+|+++...+ ... |.+++.+
T Consensus 68 ~~~l~~~la~~~g----------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~-g~~~~~v 136 (392)
T 3qhx_A 68 RTALEAALAAVED----------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGW-NVEYTPV 136 (392)
T ss_dssp HHHHHHHHHHHTT----------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGG-TCEEEEE
T ss_pred HHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhc-CcEEEEe
Confidence 4577778887764 236889999999999999999999999999999998766554 445 9999998
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. +...
T Consensus 137 ~~~-------d~~~l~~~i~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~-~~~~-- 197 (392)
T 3qhx_A 137 ALA-------DLDAVRAAIRP------TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASP-ALQQ-- 197 (392)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCT-TTCC--
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccc-ccCC--
Confidence 864 78999988764 8999999999999999976 778889999999999999999853 2211
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHhcc-c-CCCChHHHHHHHHHcC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKMSS-F-GLVSSQTQYLLSRMLS 318 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~~~-~-~~~s~~~q~~~~~~l~ 318 (464)
. ..+ +..+++.|+||.+|.+| +|+||++++++.+.+.+..... + ...++..+.++...++
T Consensus 198 ---~-~~~-------------~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 198 ---P-LSL-------------GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp ---G-GGG-------------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ---h-HHh-------------CCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 1 111 45588999999999777 8999999976666555544332 2 3356677777766665
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC-eeecCC----------------ccEEEEEecCcccccCChhHHHHH
Q 037587 319 DKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI-RCLKSN----------------AGLFCWVDMRHLLVSNTFEAEKEL 380 (464)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~-~~~~~~----------------~g~f~~~~l~~~~~~~~~~~~~~l 380 (464)
. +....+...++...+.+.|+++ ++ .+..|. .|.++++.++.. ......+
T Consensus 261 ~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~-----~~~~~~~ 328 (392)
T 3qhx_A 261 T-------LVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAG-----RTAAEQL 328 (392)
T ss_dssp T-------HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTC-----HHHHHHH
T ss_pred H-------HHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCc-----HHHHHHH
Confidence 4 2233444555666777777765 33 222111 144788888641 1112233
Q ss_pred HHHHHHhcCeEEeCCCCCCC------------------CCCCeEEEEeecCCHHHHHHHHHHHHHHH
Q 037587 381 WKKIIFEVGLNISPGSSCHC------------------NEPGWFRICFANITEETLQVALQRIKVFA 429 (464)
Q Consensus 381 ~~~ll~~~gI~v~pg~~f~~------------------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l 429 (464)
...+ +..|+.+..|+.+.. ..++.+|||++. |+.+..++.|.+++
T Consensus 329 ~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 329 CAKT-NIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp HHHC-SSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred HHhC-CCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 3333 445777777765331 135689999985 34455555555543
No 191
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.93 E-value=2.8e-24 Score=214.40 Aligned_cols=301 Identities=12% Similarity=0.101 Sum_probs=203.1
Q ss_pred CCCCCC--cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCc
Q 037587 80 FQDYHG--FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 80 Y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
|.+..| ..++|+++|++++ . ++|++|+|+++++..++.++ +++||.|+++.|+|+.+...+... |+
T Consensus 26 ~~~~~g~~~~~l~~~la~~~~--------~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~-g~ 94 (394)
T 1o69_A 26 YIAPLGEFVNRFEQSVKDYSK--------S--ENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAPICYL-KA 94 (394)
T ss_dssp TTSCTTHHHHHHHHHHHHHHC--------C--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHHHHHT-TC
T ss_pred CccCCChHHHHHHHHHHHHhC--------C--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHHHHHc-CC
Confidence 555557 7899999999985 2 68999999999999999999 899999999999999998888876 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc-ccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS-GTV 235 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~-~~~ 235 (464)
+++.++++ .+|.+|++.+++.+++. ..++++|++++ |||.. .++++|.++|+++|+++|+||+|+ +..
T Consensus 95 ~~~~v~~~--~~~~~d~~~l~~~i~~~---~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~ 163 (394)
T 1o69_A 95 KPVFIDCD--ETYNIDVDLLKLAIKEC---EKKPKALILTH---LYGNA---AKMDEIVEICKENDIVLIEDAAEALGSF 163 (394)
T ss_dssp EEEEECBC--TTSSBCHHHHHHHHHHC---SSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTTCEEEEECTTCTTCE
T ss_pred EEEEEEeC--CCCCcCHHHHHHHHhcc---cCCceEEEEEC---CCCCh---hhHHHHHHHHHHcCCEEEEECcCcccce
Confidence 99999987 46789999999988641 11578888884 89976 467788889999999999999998 443
Q ss_pred cCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCC-----------
Q 037587 236 FDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL----------- 304 (464)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~----------- 304 (464)
+.+. ....+ .+ +.+.||||..+++|.|+||++++++.+.+.+.....++.
T Consensus 164 ~~~~-----~~~~~------------~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 224 (394)
T 1o69_A 164 YKNK-----ALGTF------------GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDY 224 (394)
T ss_dssp ETTE-----ETTSS------------SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSC
T ss_pred eCCc-----ccccc------------cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCcccccccc
Confidence 3322 11011 12 345566433344677999999965666665554433221
Q ss_pred -----CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC----ccE-EEEEecCccc-----
Q 037587 305 -----VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN----AGL-FCWVDMRHLL----- 369 (464)
Q Consensus 305 -----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~g~-f~~~~l~~~~----- 369 (464)
++.+...++...+ ++ +++..+.+++.++++.+.|.+. +++.++. +++ ++++.++...
T Consensus 225 g~~~~~~~~~aa~~l~~l---~~----l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 296 (394)
T 1o69_A 225 GYNYRLSNVLGAIGVAQM---EV----LEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALINFDKNELNA 296 (394)
T ss_dssp CCBCBCCHHHHHHHHHHH---TT----HHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEESCCGGGSCC
T ss_pred CcccCcCHHHHHHHHHHH---HH----HHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEecchhhcccc
Confidence 1222222222222 22 4445667778888889999887 6665542 343 3667765310
Q ss_pred ---------ccC-ChhHHHHHHHHHHHhcCeEEeCCCCCC---C--CCC-------------CeEEEEeec-CCHHHHHH
Q 037587 370 ---------VSN-TFEAEKELWKKIIFEVGLNISPGSSCH---C--NEP-------------GWFRICFAN-ITEETLQV 420 (464)
Q Consensus 370 ---------~~~-~~~~~~~l~~~ll~~~gI~v~pg~~f~---~--~~~-------------~~~Ris~~~-~~~e~l~~ 420 (464)
... ......++...| .++||.+++|..+. + ..- ..+|+.... .++++++.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~ 375 (394)
T 1o69_A 297 CQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYE 375 (394)
T ss_dssp CCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHH
T ss_pred ccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHH
Confidence 000 001233566665 56899999985321 0 000 234444443 78999999
Q ss_pred HHHHHHHHHH
Q 037587 421 ALQRIKVFAQ 430 (464)
Q Consensus 421 ~l~~l~~~l~ 430 (464)
++++|+++++
T Consensus 376 ~~~~l~~~~~ 385 (394)
T 1o69_A 376 ISKLILKSIK 385 (394)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 192
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.93 E-value=5.2e-24 Score=213.74 Aligned_cols=285 Identities=17% Similarity=0.165 Sum_probs=191.9
Q ss_pred ccCCCC--CCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cc
Q 037587 78 ALFQDY--HGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LK 151 (464)
Q Consensus 78 ~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~ 151 (464)
..|... ....++++.++++++ .+++++++|+++++..++.+++++||.|+++.|+|...... +.
T Consensus 48 ~~y~~~~~~~~~~l~~~la~~~g----------~~~~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~ 117 (412)
T 2cb1_A 48 YVYARQKDPTAKALEERLKALEG----------ALEAVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLS 117 (412)
T ss_dssp CSBTTTCCHHHHHHHHHHHHHHT----------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTT
T ss_pred cCcCCCCChHHHHHHHHHHHHhC----------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHH
Confidence 356543 235778888888875 23799999999999999999999999999999999865543 34
Q ss_pred cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.. |++++.++. |++++++.+++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|
T Consensus 118 ~~-g~~~~~~~~--------~~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~ 179 (412)
T 2cb1_A 118 LM-GVTVRYVDP--------EPEAVREALSA------KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTF 179 (412)
T ss_dssp TT-TCEEEEECS--------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGG
T ss_pred Hc-CCEEEEECC--------CHHHHHHHhcc------CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCC
Confidence 44 999988874 37888887754 7899999999999999986 788889999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecC-H--------------------
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNN-E-------------------- 290 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~-~-------------------- 290 (464)
....+... .. .. +.++++.|+||.++.+|.|+|++++.+ .
T Consensus 180 ~~~~~~~~-----~~-~~-------------~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (412)
T 2cb1_A 180 GAAGALCR-----PL-AW-------------GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW 240 (412)
T ss_dssp GTTTTSCC-----GG-GG-------------TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred ccccccCC-----cc-cc-------------CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence 86422111 11 11 467889999999988999999988644 2
Q ss_pred ------HHHHHHHHhc--ccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee--cC---
Q 037587 291 ------RVVSAATKMS--SFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL--KS--- 355 (464)
Q Consensus 291 ------~~~~~~~~~~--~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~--~~--- 355 (464)
.+.+.++... .+. ..++....++...++. +....+...+..+++.+.|.+. ++.+. +.
T Consensus 241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~ 313 (412)
T 2cb1_A 241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPE 313 (412)
T ss_dssp HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTT
T ss_pred hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCC
Confidence 2222232221 121 2233333333333321 2233334456667788888876 66633 21
Q ss_pred ------------CccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCC---------CCCC--------------
Q 037587 356 ------------NAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGS---------SCHC-------------- 400 (464)
Q Consensus 356 ------------~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~---------~f~~-------------- 400 (464)
..+.++.+.+ . .. +.+..++++.||.+ .++ .+..
T Consensus 314 ~p~~~~~~~~~~~~~~iv~~~~-~--~~-------~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~ 382 (412)
T 2cb1_A 314 DPAHRNARKYLASGGPILTLDL-G--DL-------ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQA 382 (412)
T ss_dssp CTTHHHHHHHCSSSCSEEEEEC-S--SH-------HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHT
T ss_pred CccHHHHHHhCCCCceEEEEEe-C--CH-------HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhc
Confidence 1233666776 2 11 23455667789998 664 1210
Q ss_pred -CCCCeEEEEeec-CCHHHHHHHHHHHHH
Q 037587 401 -NEPGWFRICFAN-ITEETLQVALQRIKV 427 (464)
Q Consensus 401 -~~~~~~Ris~~~-~~~e~l~~~l~~l~~ 427 (464)
..++.+|+|++. .++++++.++++|++
T Consensus 383 g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 383 GVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 015789999987 456777777777653
No 193
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.93 E-value=3.2e-25 Score=225.33 Aligned_cols=316 Identities=12% Similarity=0.026 Sum_probs=215.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCc-----EEEeCChHHHHHHHHHHhcC--------CC-----CeEEEcC
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNK-----LVLTAGSTAANETLMFCLAD--------PG-----DAFLLPT 140 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-----i~it~G~~~al~~~~~~l~~--------~g-----d~Vlv~~ 140 (464)
.|....+..++++++.+++.+.+| ++.++ +++|+|+++++..++.++.. +| +.|++++
T Consensus 72 ~~~~~~~~~~l~~~~~~~la~l~g----~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~ 147 (452)
T 2dgk_A 72 DKEEYPQSAAIDLRCVNMVADLWH----APAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP 147 (452)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTT----CCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS
T ss_pred ChhhChhHHHHHHHHHHHHHHHhC----CCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC
Confidence 344445667888888888888776 45554 99999999999999988754 45 5899999
Q ss_pred CCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh
Q 037587 141 PYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220 (464)
Q Consensus 141 p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~ 220 (464)
+|..+...+... |++++.+++++ ++|.+|+++|++++.+ ++++|++++|+||||.+.+ +++|.++|++
T Consensus 148 -~h~~~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~ 215 (452)
T 2dgk_A 148 -VQICWHKFARYW-DVELREIPMRP-GQLFMDPKRMIEACDE------NTIGVVPTFGVTYTGNYEF---PQPLHDALDK 215 (452)
T ss_dssp -CCHHHHHHHHHT-TCEEEECCCBT-TBCSCCHHHHHHHCCT------TEEEEECBBSCTTTCBBCC---HHHHHHHHHH
T ss_pred -CcHHHHHHHHHc-CceEEEEecCC-CCCeECHHHHHHHHhh------CCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 998888888777 99999999874 4688999999998864 7899999999999999965 6667778878
Q ss_pred C------CeEEEEecccccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH
Q 037587 221 K------RIHIVSDEIYSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV 292 (464)
Q Consensus 221 ~------~~~lI~Deay~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~ 292 (464)
+ ++++++|++|+.+.. ... ..... + . ..+...+..|++| ++++|+++||++++++.+
T Consensus 216 ~~~~~~~~~~l~vD~a~~~~~~~~~~~--~~~~~--~-~---------~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~ 280 (452)
T 2dgk_A 216 FQADTGIDIDMHIDAASGGFLAPFVAP--DIVWD--F-R---------LPRVKSISASGHK-FGLAPLGCGWVIWRDEEA 280 (452)
T ss_dssp HHHHHCCCCCEEEECTTGGGTHHHHCT--TCCCS--T-T---------STTEEEEEEETTT-TTCCCSSCEEEEESSGGG
T ss_pred HhhccCCCCcEEEEcccHHHHHHhhCc--cchhh--c-C---------CCCCcEEEECccc-ccCCCCCeEEEEEcCHHH
Confidence 4 999999999987532 111 11000 1 0 1134556789999 556899999999965432
Q ss_pred -HHHHHHhcccC-----------CC---ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--
Q 037587 293 -VSAATKMSSFG-----------LV---SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-- 354 (464)
Q Consensus 293 -~~~~~~~~~~~-----------~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-- 354 (464)
.+.+.....+. +. ..+.+.++...+. .+.+++..+.+.++++++.+.|++. ++++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 355 (452)
T 2dgk_A 281 LPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQNASYQVAAYLADEIAKLGPYEFICTG 355 (452)
T ss_dssp SCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred HHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCC
Confidence 12221111111 11 2234444444442 2345667777888889999999988 587764
Q ss_pred ---CCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 355 ---SNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 355 ---~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
+..+ ++.+.++.... ... ...++...|. ++||.++.+.... ..+.+++||+++. .++++++.+++.|++++
T Consensus 356 ~~~~~~~-~v~f~~~~~~~-~~~-~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~ 431 (452)
T 2dgk_A 356 RPDEGIP-AVCFKLKDGED-PGY-TLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASL 431 (452)
T ss_dssp CTTTBSS-EEEEEECTTCC-CSC-CHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCeE-EEEEEecCccc-ccC-CHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 3445 56666653210 000 1124666664 6799765322111 1134589999987 67899999999999998
Q ss_pred HhhCc
Q 037587 430 QSCNP 434 (464)
Q Consensus 430 ~~~~~ 434 (464)
+..+.
T Consensus 432 ~~~~~ 436 (452)
T 2dgk_A 432 KYLSD 436 (452)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76653
No 194
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.93 E-value=6.9e-25 Score=218.61 Aligned_cols=282 Identities=16% Similarity=0.129 Sum_probs=186.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~ 160 (464)
+..++|++||++++ .+ +.++++++++++..++. ++++||.|+++.|+|++... .++.. |++++.
T Consensus 56 ~~~~lr~~la~~~g--------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~v~~ 123 (393)
T 1n8p_A 56 NRENLERAVAALEN--------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAH-GVETSF 123 (393)
T ss_dssp HHHHHHHHHHHHTT--------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTT-CSCCEE
T ss_pred hHHHHHHHHHHHhC--------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHc-CcEEEE
Confidence 35789999999875 23 45555556999999999 99999999999999985443 34545 999988
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC----CeEEEEecccccccc
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK----RIHIVSDEIYSGTVF 236 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~----~~~lI~Deay~~~~~ 236 (464)
++.+ | +++++++++ ++++|++++|+||||.+++ +++|.++|+++ |+++|+||+|..+.+
T Consensus 124 v~~~-------d-~~l~~~i~~------~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKE------NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp ESSH-------H-HHHHHHSCS------SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred eCCC-------h-HHHHHhccc------CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 8753 5 677776643 7899999999999999986 77788888899 999999999987544
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHHHHHHHHhcc-cC-CCChHHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERVVSAATKMSS-FG-LVSSQTQYLL 313 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~~~~~~~~~~-~~-~~s~~~q~~~ 313 (464)
. . ...+ +.++++.|+||.+|.+|+|+ ||++++++.+.+.+..... +. ..++..+.++
T Consensus 187 ~-~------~~~~-------------~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~ 246 (393)
T 1n8p_A 187 S-N------PLNF-------------GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLT 246 (393)
T ss_dssp C-C------GGGG-------------TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred C-C------HHHc-------------CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 2 2 1112 45688999999999899999 9999855555554443322 22 3455555555
Q ss_pred HHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC--Ce-e-ecC--------------C--c-cEEEEEecCcccccC
Q 037587 314 SRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG--IR-C-LKS--------------N--A-GLFCWVDMRHLLVSN 372 (464)
Q Consensus 314 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g--~~-~-~~~--------------~--~-g~f~~~~l~~~~~~~ 372 (464)
...++. +....+...++...+.+.|.+.. +. + .+. . . |.++++.++..
T Consensus 247 ~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~---- 315 (393)
T 1n8p_A 247 HRGLKT-------LHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG---- 315 (393)
T ss_dssp HHHHTT-------HHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC----
T ss_pred Hhccch-------HHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc----
Confidence 555543 22333444555666777776652 22 2 110 1 1 44788888631
Q ss_pred ChhHHHHHHHHHHHhcCeEEeCCC----------CCCC-----------CCCCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 373 TFEAEKELWKKIIFEVGLNISPGS----------SCHC-----------NEPGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 373 ~~~~~~~l~~~ll~~~gI~v~pg~----------~f~~-----------~~~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
......++..+ +..++.+..|+ .++. ..++.+|+|++. .++++++.+.++|+++
T Consensus 316 -~~~~~~~l~~l-~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 316 -AEAASKFASST-RLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp -HHHHHHHHHHC-SSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhC-CcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 01122233322 23344544442 2210 114789999998 4567777777777654
No 195
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.93 E-value=1.8e-24 Score=219.58 Aligned_cols=340 Identities=11% Similarity=0.070 Sum_probs=209.7
Q ss_pred CCCCceEEeeccc--ccc--cHHHHH-H-HHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCCCC
Q 037587 33 HNPSGIIQMGLAE--NQL--SFDLLE-S-WLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVK 106 (464)
Q Consensus 33 ~~~~~~i~l~~~~--n~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~ 106 (464)
.+...++|++.+. +++ .+|.+. + ++.+.... ......|.. .+..+.+..+++.+.+..+ .
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~----------~~~~~~~~~-~~~~~~~~~la~~la~~~~---~ 116 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQ----------AALNKPSNS-DVYSVAMARFVETFARVLG---D 116 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHH----------HHTCCCCTT-TCCCHHHHHHHHHHHHHHC---C
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHH----------HHhcCCCCc-ccCCHHHHHHHHHHHHhcC---C
Confidence 3445688986553 444 346666 5 65551100 111112221 1233444555555544433 1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---C----------C-CCeEEEcCCCCCChhhhcccCCCc-------------EEE
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLA---D----------P-GDAFLLPTPYYPGFDRDLKWRPGV-------------EIV 159 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~---~----------~-gd~Vlv~~p~y~~~~~~~~~~~g~-------------~~~ 159 (464)
..+++|++|+|+++++..+++++. . + ||.|++.+|+|+++...+....|. .++
T Consensus 117 ~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (449)
T 2cjg_A 117 PALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRI 196 (449)
T ss_dssp TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEE
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcE
Confidence 357899999999999999987542 2 2 899999999998765543222121 455
Q ss_pred EEecCCCCCc--------ccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCC-CCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 160 PIHCSSSNGF--------RITISALENAYQQAQTLNLKVKGVLITNP-SNPLG-TAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 160 ~v~~~~~~~~--------~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG-~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
.+|.+..+.. ..+++.|++.+++ .++++++|+ ++| +|||| ..++.+++++|.++|+++|+++|+||
T Consensus 197 ~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~---~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE 272 (449)
T 2cjg_A 197 DAPYMRPGLDEPAMAALEAEALRQARAAFET---RPHDIACFV-AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDE 272 (449)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH---STTTEEEEE-ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEcCCCchhhccccchhhHHHHHHHHHHHHh---cCCceEEEE-EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEec
Confidence 5554320011 2355667777753 123676655 556 68999 58899999999999999999999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH-----HHH--hccc
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA-----ATK--MSSF 302 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~-----~~~--~~~~ 302 (464)
+|.++.+.+. . ... .... ....+ .||||.+ |+||+++++ .+.+. ... ....
T Consensus 273 v~~g~g~~g~--~-~~~-~~~~---------~~~di---~t~sK~l-----~iG~~~~~~-~~~~~l~~~~~~~~~~~~t 330 (449)
T 2cjg_A 273 VQTGCGLTGT--A-WAY-QQLD---------VAPDI---VAFGKKT-----QVCGVMAGR-RVDEVADNVFAVPSRLNST 330 (449)
T ss_dssp TTTTTTTTSS--S-STH-HHHT---------CCCSE---EEECGGG-----SSEEEEECG-GGGGSTTCTTTSTTSSCCS
T ss_pred cccCCCccCc--c-eee-cccC---------CCceE---EEecCcc-----cEEEEEECH-HHhhhhhhcccCCcccccC
Confidence 9997544332 1 121 1111 11233 3899987 789999965 44332 111 1122
Q ss_pred CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-----C-CeeecCCccEEEEEecCcccccCChhH
Q 037587 303 GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-----G-IRCLKSNAGLFCWVDMRHLLVSNTFEA 376 (464)
Q Consensus 303 ~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----g-~~~~~~~~g~f~~~~l~~~~~~~~~~~ 376 (464)
+..+++++.++.++++... + +...+.++++++++.+.|+++ + +...++.++ |++++++.. ..
T Consensus 331 ~~~n~~~~~aa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~-~~~~~~~~~------~~ 398 (449)
T 2cjg_A 331 WGGNLTDMVRARRILEVIE---A--EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGL-MCAFSLPTT------AD 398 (449)
T ss_dssp SSSCHHHHHHHHHHHHHHH---H--HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETT-EEEEECSSH------HH
T ss_pred CCCCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccE-EEEEEECCh------HH
Confidence 3467888888888775321 1 123344455556666666543 2 444555655 677888642 12
Q ss_pred HHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 377 EKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 377 ~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
..+++..|+ ++||.+.|+. .+++||+++. .+++++++++++|++++++
T Consensus 399 ~~~~~~~l~-~~Gv~v~~~g------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 399 RDELIRQLW-QRAVIVLPAG------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp HHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HCCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 335777776 5799999863 4789998765 6899999999999999875
No 196
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.93 E-value=1.1e-24 Score=215.15 Aligned_cols=289 Identities=14% Similarity=0.161 Sum_probs=200.8
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVE 157 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~ 157 (464)
.|.+..+..++++++|++++ . +++++++|+++++..++.++ +++||.|+++.|+|..+...+... |++
T Consensus 30 ~~~~~~~~~~l~~~la~~~~--------~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~~~~~~-G~~ 98 (367)
T 3nyt_A 30 QYILGPEVTELEDRLADFVG--------A--KYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALL-GAK 98 (367)
T ss_dssp CCSSCHHHHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHHHHHT-TCE
T ss_pred CccCChHHHHHHHHHHHHhC--------C--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHHHHHHc-CCE
Confidence 45555567899999999985 2 37999999999999999999 899999999999999998888877 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc-cc
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT-VF 236 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~-~~ 236 (464)
++.++++++ .+.+|++.+++.+++ ++++|+ |+||||...+ +++|.++|+++|+++|+|++|+.. .+
T Consensus 99 ~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~D~a~~~g~~~ 165 (367)
T 3nyt_A 99 PVYVDIDPR-TYNLDPQLLEAAITP------RTKAII---PVSLYGQCAD---FDAINAIASKYGIPVIEDAAQSFGASY 165 (367)
T ss_dssp EEEECBCTT-TCSBCGGGTGGGCCT------TEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEEECTTTTTCEE
T ss_pred EEEEecCCc-cCCcCHHHHHHhcCc------CCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEEEECccccCCeE
Confidence 999998753 478999999988753 787766 7889997754 777888899999999999999742 12
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCC--CcCCCCCccEEEEEEecCHHHHHHHHHhccc------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSL--SKDFSMPGFRVGMIYSNNERVVSAATKMSSF------------ 302 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~--SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~------------ 302 (464)
.+. ....+ + .+++.|| +|.+|.+|. .|+++++++.+.+.++.....
T Consensus 166 ~~~-----~~~~~-------------~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g 225 (367)
T 3nyt_A 166 KGK-----RSCNL-------------S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVG 225 (367)
T ss_dssp TTE-----ETTSS-------------S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCC
T ss_pred CCe-----eccCC-------------C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccC
Confidence 221 11001 2 4677887 899985586 899999777777666554332
Q ss_pred --CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecC-Cc---cE-EEEEecCcccccCChh
Q 037587 303 --GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKS-NA---GL-FCWVDMRHLLVSNTFE 375 (464)
Q Consensus 303 --~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~---g~-f~~~~l~~~~~~~~~~ 375 (464)
+..+.+.++++...++. +++..++.++..+++.+.|.+.++.+... .+ ++ ++++.++.
T Consensus 226 ~~~~~~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 290 (367)
T 3nyt_A 226 VNSRLDTLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDN-------- 290 (367)
T ss_dssp CBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSS--------
T ss_pred cCCCccHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCC--------
Confidence 22455555555444432 22333444555667777888776544322 11 11 23334331
Q ss_pred HHHHHHHHHHHhcCeEEeCCCCCCC--------CC----------CCeEEEEeec-CCHHHHHHHHHHHHHH
Q 037587 376 AEKELWKKIIFEVGLNISPGSSCHC--------NE----------PGWFRICFAN-ITEETLQVALQRIKVF 428 (464)
Q Consensus 376 ~~~~l~~~ll~~~gI~v~pg~~f~~--------~~----------~~~~Ris~~~-~~~e~l~~~l~~l~~~ 428 (464)
..++...| +++||.++++..... .. ...+|+++.. +++++++.+++.|++.
T Consensus 291 -~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 291 -RESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp -HHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred -HHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 12355555 567999987643110 00 2368999877 7999999999998764
No 197
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.92 E-value=9.3e-25 Score=216.11 Aligned_cols=298 Identities=12% Similarity=0.169 Sum_probs=197.5
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcE
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVE 157 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~ 157 (464)
.|.+..+..++|+++|++++ . +++++++|+++++..++.++ +++||+|+++.|+|..+...+... |++
T Consensus 31 ~~~~~~~~~~l~~~la~~~~--------~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~-g~~ 99 (373)
T 3frk_A 31 WFILGDEDKKFEQEFADYCN--------V--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALAVSYT-GAK 99 (373)
T ss_dssp CCSSSHHHHHHHHHHHHHHT--------S--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHHHHHH-SCE
T ss_pred CccCCchHHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCE
Confidence 35555677999999999986 2 37899999999999999999 899999999999999998888777 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-c
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-F 236 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~ 236 (464)
++.++.++ +++.+|++++++.+++ ++++|+ |+||||...+ +++|.++|+++|+++|+|++|+... +
T Consensus 100 ~~~~~~~~-~~~~~d~~~l~~~l~~------~~~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~ 166 (373)
T 3frk_A 100 PIFVEPDI-RTYNIDPSLIESAITE------KTKAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIEDAAQAHGSLY 166 (373)
T ss_dssp EEEECEET-TTTEECGGGTGGGCCT------TEEEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEECTTCTTCEE
T ss_pred EEEEeccc-cccCcCHHHHHHhcCC------CCeEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEECCcccCCEE
Confidence 99999874 3578899999988754 788777 6789999865 6678888889999999999998432 2
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCC--cCCCCCccEEEEEEecCHHHHHHHHHhcccC-----------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLS--KDFSMPGFRVGMIYSNNERVVSAATKMSSFG----------- 303 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~S--K~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~----------- 303 (464)
... .... -..+++.||| |.+|..| +.|+++++++.+.+.++.....+
T Consensus 167 ~~~-----~~~~--------------~~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g 226 (373)
T 3frk_A 167 KGM-----KVGS--------------LGDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKG 226 (373)
T ss_dssp TTE-----ETTS--------------SSSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCC
T ss_pred CCE-----eccc--------------cccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCcccccc
Confidence 211 1100 1236678877 9887325 48999987776666555443321
Q ss_pred ---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcccccCChhHHHH
Q 037587 304 ---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 304 ---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
..+.+..++....+.. +++..+..++..+++.+.|.+.++.+.. +.++...|..++-... +..+
T Consensus 227 ~~~~~~~~~aa~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 294 (373)
T 3frk_A 227 FNSRLDELQAGFLRVKLKY-------LDKWNEERRKIAQKYIAGINNPNVIIPVEADYAKHVWYTFVIRSE-----KRDE 294 (373)
T ss_dssp CBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHCCCTTEECCCCCTTEECCCSSEEEEES-----SHHH
T ss_pred ccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCceEeccCCCCCceeeEEEEEEeC-----CHHH
Confidence 1233333333222221 3334444555666777777766643321 1111111111110000 1224
Q ss_pred HHHHHHHhcCeEEeCCCCCCCC--------------C-------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 380 LWKKIIFEVGLNISPGSSCHCN--------------E-------PGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~--------------~-------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+...| .++||.++++...... . .+.+|++++. .++++++.+++.|+++..+++
T Consensus 295 l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~ 369 (373)
T 3frk_A 295 LQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEHH 369 (373)
T ss_dssp HHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC----
T ss_pred HHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhhc
Confidence 55555 5679999876521100 0 1579999987 899999999999998766554
No 198
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.92 E-value=2.2e-23 Score=214.64 Aligned_cols=323 Identities=11% Similarity=0.152 Sum_probs=218.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-----C-eEEEcCCCCCC
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD--------PG-----D-AFLLPTPYYPG 145 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~--------~g-----d-~Vlv~~p~y~~ 145 (464)
|....+..++.+.+.+++.+.+|. +.+++++++|+|+++++..++.++.. +| + .|+++.++|+.
T Consensus 124 ~~~~~~~~~le~~~~~~la~~~g~--~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s 201 (504)
T 2okj_A 124 YEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 201 (504)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhChHHHHHHHHHHHHHHHHhCC--CCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence 443334456777777777777661 12267999999999999999988753 56 6 79999999998
Q ss_pred hhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 146 FDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 146 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
+...+... |. +++.+|++ .++.+|+++|++++++....+.++++|++++|+||||.+.+ +++|.++|+++|
T Consensus 202 ~~~~~~~~-g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g 275 (504)
T 2okj_A 202 IKKAGAAL-GFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYN 275 (504)
T ss_dssp HHHHHHHT-TSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHc-CCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcC
Confidence 88877765 65 89999986 36789999999999865444556899999999999999854 778889999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHH-HHHHhcc
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVS-AATKMSS 301 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~-~~~~~~~ 301 (464)
+++++|++|+...+..+ .+.....-+. ...+++.|++|.++.| .++|+++++++.+.. .+.....
T Consensus 276 ~~lhvD~a~~~~~~~~~--~~~~~~~g~~-----------~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~~ 341 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSR--KHRHKLNGIE-----------RANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCAG 341 (504)
T ss_dssp CEEEEEETTGGGGGGCT--TTGGGGTTGG-----------GCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCCS
T ss_pred CEEEEehhhhhHHHhCH--hhHhhcCCcc-----------cCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCCc
Confidence 99999999997655433 2212111111 2235678999999844 689999997653333 2222211
Q ss_pred cCC----------------------CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec---C
Q 037587 302 FGL----------------------VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK---S 355 (464)
Q Consensus 302 ~~~----------------------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~---~ 355 (464)
+.. ..++.+.++..++. .+.+++..+...+.++++.+.|++. |+++.. +
T Consensus 342 ~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p 416 (504)
T 2okj_A 342 YLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEP 416 (504)
T ss_dssp SSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCC
T ss_pred cccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCC
Confidence 110 12455555555553 2335666677778889999999886 888764 6
Q ss_pred CccEEEEEecCccccc--CC--h-----hHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEee-c-CCHHHHHHHHHH
Q 037587 356 NAGLFCWVDMRHLLVS--NT--F-----EAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFA-N-ITEETLQVALQR 424 (464)
Q Consensus 356 ~~g~f~~~~l~~~~~~--~~--~-----~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~-~-~~~e~l~~~l~~ 424 (464)
..+++++...+..... .. + ....++...|+ +.|+.+..+..+. ...+++|++++ . .++++++.++++
T Consensus 417 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~-~~~~~lRis~~~~~~t~edi~~~~~~ 494 (504)
T 2okj_A 417 EHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQG-DKANFFRMVISNPAATQSDIDFLIEE 494 (504)
T ss_dssp SSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEET-TEEEEEEECCCCTTCCHHHHHHHHHH
T ss_pred CeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEEC-CceEEEEEEeCCCCCCHHHHHHHHHH
Confidence 7776766555532110 00 0 01224666665 4575443322222 12368999997 3 689999999999
Q ss_pred HHHHHHh
Q 037587 425 IKVFAQS 431 (464)
Q Consensus 425 l~~~l~~ 431 (464)
|++++++
T Consensus 495 l~~~~~~ 501 (504)
T 2okj_A 495 IERLGQD 501 (504)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 9988764
No 199
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.92 E-value=1.1e-23 Score=212.94 Aligned_cols=295 Identities=14% Similarity=0.094 Sum_probs=199.2
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh---------cCCCCeEEEcCCCCCChhhhc
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL---------ADPGDAFLLPTPYYPGFDRDL 150 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l---------~~~gd~Vlv~~p~y~~~~~~~ 150 (464)
|.+..+..++++++|++++ .+ ++++++++++++..++.++ +++||.|+++.|+|+.+...+
T Consensus 58 ~~~~~~~~~l~~~la~~~g--------~~--~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~ 127 (437)
T 3bb8_A 58 LTTGRFNDAFEKKLGEYLG--------VP--YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT 127 (437)
T ss_dssp CBSCHHHHHHHHHHHHHHT--------CS--EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH
T ss_pred cCCChHHHHHHHHHHHHHC--------CC--cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH
Confidence 4444567999999999986 22 5777788889999999998 789999999999999998888
Q ss_pred ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC-CCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 151 KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN-PSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 151 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~-P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
... |++++.+++++ +++.+|++.+++.+.+ ++++|++++ |+|| .++++|.++|+++|+++|+|+
T Consensus 128 ~~~-g~~~~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~g~~-------~~~~~i~~l~~~~~~~li~D~ 192 (437)
T 3bb8_A 128 IQN-GLIPVFVDVDI-PTYNVNASLIEAAVSD------KTKAIMIAHTLGNL-------FDLAEVRRVADKYNLWLIEDC 192 (437)
T ss_dssp HHT-TCEEEECCEET-TTTEECGGGHHHHCCT------TEEEEEEECGGGCC-------CCHHHHHHHHHHHTCEEEEEC
T ss_pred HHc-CCEEEEEeccC-ccCCcCHHHHHHhcCC------CCeEEEEeCCCCCh-------hcHHHHHHHHHHcCCEEEEEC
Confidence 776 99999998864 2578999999988754 789999884 5555 357888899999999999999
Q ss_pred cccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC------
Q 037587 230 IYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG------ 303 (464)
Q Consensus 230 ay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~------ 303 (464)
+|+....... .. + .. . . .+++.||+|.++++|.|+|+++++++.+...+.....+.
T Consensus 193 a~~~g~~~~~----~~---~-~~--------~-~-d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (437)
T 3bb8_A 193 CDALGSTYDG----KM---A-GT--------F-G-DIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCA 254 (437)
T ss_dssp TTCTTCEETT----EE---T-TS--------S-S-SEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC---
T ss_pred ccccCceECC----ee---c-cc--------c-c-CEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccc
Confidence 9983211111 11 1 10 0 1 256789999988999999999997676655433321110
Q ss_pred -----------------------------------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 304 -----------------------------------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 304 -----------------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
.++.+...++...++. +.+..++.++..+++.+.|.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~~~~~~~~~l~~~L~~~ 327 (437)
T 3bb8_A 255 PGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVEKRKANFKYLKDALQSC 327 (437)
T ss_dssp -------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHGGGG
T ss_pred cccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhcc
Confidence 1234444444444322 1222233355567788888877
Q ss_pred -CCeeecCC--------ccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC-CC----------------
Q 037587 349 -GIRCLKSN--------AGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC-NE---------------- 402 (464)
Q Consensus 349 -g~~~~~~~--------~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~-~~---------------- 402 (464)
|+.+.+.. .++.+.++.+.... ..++...| .++||.++++..... ..
T Consensus 328 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~ 400 (437)
T 3bb8_A 328 ADFIELPEATENSDPSWFGFPITLKEDSGVS------RIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTN 400 (437)
T ss_dssp TTTEECCCCCTTEECCCSSEEEEECGGGSSC------HHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHH
T ss_pred CCccccCCCCCCCceeeEEEEEEECCcCcCc------HHHHHHHH-HHCCCceeccCCcccccCchhhccCccccCCCcH
Confidence 66555321 12233344431111 12455665 467999998754210 00
Q ss_pred -----CCeEEEEeec-CCHHHHHHHHHHHHHHHHh
Q 037587 403 -----PGWFRICFAN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 403 -----~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
.+.+||+++. .++++++.+++.|+++++.
T Consensus 401 ~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~~ 435 (437)
T 3bb8_A 401 TDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFGL 435 (437)
T ss_dssp HHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTTT
T ss_pred HHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHcc
Confidence 1249999877 7999999999999987653
No 200
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.92 E-value=1.9e-23 Score=214.18 Aligned_cols=322 Identities=12% Similarity=0.122 Sum_probs=217.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCC-----CCCcEEEeCChHHHHHHHHHHhcCC---------CC--------e-
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKF-----DPNKLVLTAGSTAANETLMFCLADP---------GD--------A- 135 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~~i~it~G~~~al~~~~~~l~~~---------gd--------~- 135 (464)
.|....+..++++.+++++.+.+|.+... ....+++|+|+|+++..++.++..+ || .
T Consensus 104 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 104 SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 34444456789999999998887732100 1246899999999999988775321 42 3
Q ss_pred -EEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHH
Q 037587 136 -FLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214 (464)
Q Consensus 136 -Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i 214 (464)
|+++.++|..+...+... |++++.+|++ .++.+|+++|++++++..+.+..+.+|++++|+||||.+ +++++|
T Consensus 184 ~v~~s~~~h~s~~~~~~~~-G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~---~~l~~I 257 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLIG-GVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSF---DNLLEV 257 (486)
T ss_dssp EEEEETTCCHHHHHHHHHH-TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHH
T ss_pred EEEECCCCcHHHHHHHHhC-CCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCC---CCHHHH
Confidence 788999999988888877 9999999986 478899999999998743334445688999999999987 568889
Q ss_pred HHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH-H
Q 037587 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV-V 293 (464)
Q Consensus 215 ~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-~ 293 (464)
+++|+++|+++++|++|+...+..+ .+.....-+. ....+..+++|.++.| +++|+++++++.. .
T Consensus 258 ~~la~~~~~~lhvD~a~g~~~~~~~--~~~~~~~g~~-----------~adsi~~~~hK~~~~p-~~~G~l~~~~~~~l~ 323 (486)
T 1js3_A 258 GPICHEEDIWLHVDAAYAGSAFICP--EFRHLLNGVE-----------FADSFNFNPHKWLLVN-FDCSAMWVKRRTDLT 323 (486)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGST--TTGGGGTTGG-----------GCSEEEECHHHHSSCC-SSCEEEEESCHHHHH
T ss_pred HHHHHHcCCEEEEehhhHHHHHHCH--HHHHHhcCcc-----------ccCeeEEchhhhcCCC-cceEEEEEeCHHHHH
Confidence 9999999999999999987544322 1222111111 1224457899999855 8999999977653 2
Q ss_pred HHHHHhccc--------------------C--CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 294 SAATKMSSF--------------------G--LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 294 ~~~~~~~~~--------------------~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
+.+.....+ . ....+.+.++...+. .+.+++..+.+.++++++.+.|.+. |+
T Consensus 324 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~ 398 (486)
T 1js3_A 324 GAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAFVLQDPRF 398 (486)
T ss_dssp GGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 222100000 0 012344554444442 2346666777778888999999887 88
Q ss_pred eee-cCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHH
Q 037587 351 RCL-KSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKV 427 (464)
Q Consensus 351 ~~~-~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~ 427 (464)
++. ++..+++. +.++.. .....++...|.+ .|+.+.++..+. +.+++|++++. .++++++.++++|++
T Consensus 399 ~~~~~~~~~~v~-f~~~~~-----~~~~~~l~~~L~~-~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~ 469 (486)
T 1js3_A 399 EVCAEVTLGLVC-FRLKGS-----DGLNEALLERINS-ARKIHLVPCRLR--GQFVLRFAICSRKVESGHVRLAWEHIRG 469 (486)
T ss_dssp EECSCCCSSEEE-EEESSC-----HHHHHHHHHHHHH-HTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEeCCCceeEEE-EEecCh-----HHHHHHHHHHHHh-cCCEEEEEEEEC--CEEEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 876 36666544 455421 0112356677654 476543333332 35689999854 478999999999999
Q ss_pred HHHhhCc
Q 037587 428 FAQSCNP 434 (464)
Q Consensus 428 ~l~~~~~ 434 (464)
++++...
T Consensus 470 ~~~~~~~ 476 (486)
T 1js3_A 470 LAAELLA 476 (486)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9876653
No 201
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.92 E-value=4.2e-24 Score=219.51 Aligned_cols=312 Identities=12% Similarity=0.045 Sum_probs=212.0
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCcEE---EeCChHHHHHHHHHHhcCC--------CC-----eEEEcCCCCCChh
Q 037587 84 HGFPDAKKELVKLMARIRGNKVKFDPNKLV---LTAGSTAANETLMFCLADP--------GD-----AFLLPTPYYPGFD 147 (464)
Q Consensus 84 ~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~---it~G~~~al~~~~~~l~~~--------gd-----~Vlv~~p~y~~~~ 147 (464)
.+..++.+.+.+++.+.+| .+.+++++. +|+|+++++.+++.++..+ |+ .|+++.++|..+.
T Consensus 91 p~~~~le~~~~~~la~l~g--~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~ 168 (502)
T 3hbx_A 91 PVTTELQNRCVNMIAHLFN--APLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE 168 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTT--CCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhC--CCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH
Confidence 3456777788888877766 222255544 4899999999998887655 76 8999999999888
Q ss_pred hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC------
Q 037587 148 RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK------ 221 (464)
Q Consensus 148 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~------ 221 (464)
..+... |++++.+++++ +++.+|++++++++.+ ++++|++++|+||||.+.+ +++|.++|+++
T Consensus 169 ~~~~~~-G~~~~~v~~~~-~~~~~d~~~l~~~i~~------~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~ 237 (502)
T 3hbx_A 169 KFARYF-EVELKEVKLSE-GYYVMDPQQAVDMVDE------NTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGW 237 (502)
T ss_dssp HHHHHT-TCEEEEECCBT-TBCSCCHHHHHHHCCT------TEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCC
T ss_pred HHHHHc-CceeEEEecCC-CcCcCCHHHHHHHHhh------CCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCC
Confidence 888877 99999999874 4588999999998865 7889999999999999965 56677777787
Q ss_pred CeEEEEecccccccc--CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHH-HHHHH
Q 037587 222 RIHIVSDEIYSGTVF--DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVV-SAATK 298 (464)
Q Consensus 222 ~~~lI~Deay~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~-~~~~~ 298 (464)
|+++++|++|+++.. ... ....... ......+..|.+|.++ ++.++||++..++... ..+..
T Consensus 238 ~~~l~VD~A~~~~~~p~~~~--~~~~~~~------------~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~~~~~~ 302 (502)
T 3hbx_A 238 DTPIHVDAASGGFIAPFLYP--ELEWDFR------------LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLPEELIF 302 (502)
T ss_dssp CCCEEEECTTGGGTHHHHCT--TCCCSTT------------STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSCGGGCE
T ss_pred CCeEEEECCccchhhhhhCc--ccccccC------------CCCceEEEECcccccC-CCCCeEEEEEeCHHHhhHHhcc
Confidence 999999999986431 111 1111000 1144566789999874 7778999887654332 21111
Q ss_pred hccc-----------CCC---ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CeeecC--CccEEE
Q 037587 299 MSSF-----------GLV---SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG-IRCLKS--NAGLFC 361 (464)
Q Consensus 299 ~~~~-----------~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~--~~g~f~ 361 (464)
...+ ++. ....+.++...+.. +.+.+..+...+..+++.+.|++++ +++..+ ..+ ++
T Consensus 303 ~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~-~v 376 (502)
T 3hbx_A 303 HINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH-----EGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVP-LV 376 (502)
T ss_dssp EECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSS-EE
T ss_pred CcccccCCCCCccccCCchHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCce-EE
Confidence 1111 111 12334343333332 2345566666777789999999985 888765 454 77
Q ss_pred EEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCC-CCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 362 WVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCH-CNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 362 ~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~-~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.++++.... . ...++...| .++||.|....... ..+..++||+++. .++++++.+++.|++++++.+.
T Consensus 377 ~f~~~~~~~---~-~~~~l~~~L-~~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 377 AFSLKDSSC---H-TEFEISDML-RRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp EEEESSCSS---C-CHHHHHHHH-HTTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCc---C-CHHHHHHHH-HhCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 777764211 1 112455665 57799975433221 1234689999986 7899999999999999887664
No 202
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.92 E-value=7e-23 Score=210.82 Aligned_cols=327 Identities=11% Similarity=0.131 Sum_probs=221.6
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------------CCCeEEEcCCCC
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLAD--------------PGDAFLLPTPYY 143 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~--------------~gd~Vlv~~p~y 143 (464)
..|....+..++++.+++++.+.+|. +.+++.+++|+|+++++..++.++.. +++.|+++.++|
T Consensus 125 ~~~~~~p~~~~le~~~~~~l~~~~g~--~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 125 FTYEIAPVFVLMEQITLKKMREIVGW--SSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTC--CSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCcccCchHHHHHHHHHHHHHHHhCC--CCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 35665566788999999999988872 23357899999999999988887654 567899999999
Q ss_pred CChhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh
Q 037587 144 PGFDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS 220 (464)
Q Consensus 144 ~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~ 220 (464)
..+...+... |+ +++.++.+. ++.+|+++|++++++....+..+++|++++|+||||.+ +++++|+++|++
T Consensus 203 ~s~~~~~~~~-g~g~~~~~~v~~d~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v---d~l~~I~~ia~~ 276 (511)
T 3vp6_A 203 YSIKKAGAAL-GFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPIQEIADICEK 276 (511)
T ss_dssp THHHHHHHHT-TSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB---CCHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCCCCcEEEeecCC--CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc---ccHHHHHHHHHH
Confidence 9998888876 87 899999863 57899999999998755555558999999999999998 568889999999
Q ss_pred CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHH-HHh
Q 037587 221 KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAA-TKM 299 (464)
Q Consensus 221 ~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~-~~~ 299 (464)
+|+++++|++|+...+..+ .+.. .... ......++.+++|+++.| ..+|+++.+++.+.... ...
T Consensus 277 ~~~~lhvD~a~~~~~~~~~--~~~~---~~~g--------~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~~~~ 342 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSR--KHRH---KLNG--------IERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMH 342 (511)
T ss_dssp HTCEEEEEETTGGGGGGCT--TTGG---GGTT--------GGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCC
T ss_pred cCCEEEEEccchhhHhhCh--hhhh---hccC--------CccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHhccC
Confidence 9999999999987544332 2221 1110 012345677999999744 67899888665443322 111
Q ss_pred cccC----------------------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec--
Q 037587 300 SSFG----------------------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-- 354 (464)
Q Consensus 300 ~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-- 354 (464)
..+. ....+...++..++. .+.+++..+++.+..+++.+.|++. |+++..
T Consensus 343 ~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~ 417 (511)
T 3vp6_A 343 ASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMVFNG 417 (511)
T ss_dssp CTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSS
T ss_pred CccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 1110 011233333333332 3456777788888889999999887 888765
Q ss_pred -CCccEEEEEecCcccccC--Chh-------HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHH
Q 037587 355 -SNAGLFCWVDMRHLLVSN--TFE-------AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVAL 422 (464)
Q Consensus 355 -~~~g~f~~~~l~~~~~~~--~~~-------~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l 422 (464)
+..+.++|.-.|...... ... ...++.+.|++ .|+.+.. ..+...+.+++|++++. .++++++.++
T Consensus 418 ~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~-~G~~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll 495 (511)
T 3vp6_A 418 EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVG-YQPQGDKANFFRMVISNPAATQSDIDFLI 495 (511)
T ss_dssp CCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHH-HTSCEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHH
T ss_pred CCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHH
Confidence 566655443334332211 000 12246666654 5765443 11111223579999943 6889999999
Q ss_pred HHHHHHHHhhC
Q 037587 423 QRIKVFAQSCN 433 (464)
Q Consensus 423 ~~l~~~l~~~~ 433 (464)
+.|+++-+..+
T Consensus 496 ~~i~~~~~~~~ 506 (511)
T 3vp6_A 496 EEIERLGQDLH 506 (511)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHhhh
Confidence 99998766543
No 203
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=2.3e-23 Score=206.62 Aligned_cols=300 Identities=11% Similarity=0.088 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh--hhcccCCC--cEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD--RDLKWRPG--VEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~~g--~~~~~v~~ 163 (464)
++.+.+++.+.+.++ .+ +.|++|+|+++++..++..+ .+||+|++..++|.++. ..+... | .+++.++.
T Consensus 35 ~~~~~~~~~l~~~~~----~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~ 107 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYN----AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKG-KFAKSSTVLTA 107 (379)
T ss_dssp HHHHHHHHHHHHHHT----CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHH-CCSSEEEEEEC
T ss_pred HHHHHHHHHHHHHhC----CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHh-CCCCceEEEec
Confidence 455555555555444 33 68899999999999988654 69999999999986542 223333 4 47777776
Q ss_pred CCC------CC-cccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccccc
Q 037587 164 SSS------NG-FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVF 236 (464)
Q Consensus 164 ~~~------~~-~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~ 236 (464)
+.. .. ..+|++++++.+++. ++++|++++++||||.+++.+++++|.++|+++|+++|+|++++ .
T Consensus 108 ~~~g~~~~~~~~~~~d~~~l~~~i~~~-----~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g-- 179 (379)
T 3ke3_A 108 ERTEDTEAPKPFAPVDIETAVAKIKED-----KSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G-- 179 (379)
T ss_dssp EESSCCSSCCCEECCCHHHHHHHHHHH-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T--
T ss_pred cccccccccCCCCCCCHHHHHHHHhhc-----CCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C--
Confidence 421 11 247999999998642 67889999999999999999999999999999999999999975 2
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--c-------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--S------------- 301 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~------------- 301 (464)
.. . ..+..+ +..+++.|++|.++ .+..+|+++++++ +.+.+.... .
T Consensus 180 -~~--~-~~~~~~-------------~~d~~~~s~~K~l~-~~~g~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 240 (379)
T 3ke3_A 180 -CV--W-LDMKEL-------------GIDVLISAPQKGWS-STPCAGLVMLSAA-AIKKVESTESNCFSLDLKQWLTIMR 240 (379)
T ss_dssp -TC--C-CCHHHH-------------TCSEEEECTTTTTC-SCCCEEEEEECHH-HHHHHHTCCCSCSTTCHHHHHHHHH
T ss_pred -Cc--c-cccccc-------------CCCEEEecchhhcC-CCCceEEEEECHH-HHHhhhcCCCCceeecHHHHHHHHH
Confidence 12 1 222222 34577889999986 3345899998544 433333210 0
Q ss_pred --------c-CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCC---ccEEEEEecCccc
Q 037587 302 --------F-GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSN---AGLFCWVDMRHLL 369 (464)
Q Consensus 302 --------~-~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~g~f~~~~l~~~~ 369 (464)
+ ++.+...+.++.++++.-. +..+++.+++++++++++.+.|+++|+++..+. ++....+..+.
T Consensus 241 ~~~~g~~~~~~t~~~~~~~a~~aal~~~~--~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~-- 316 (379)
T 3ke3_A 241 AYENGGHAYHATMPTDSLRQFRDAILEAK--EIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTER-- 316 (379)
T ss_dssp HHHTTSCCCSSCCCHHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSC--
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHHHHHH--HhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCC--
Confidence 1 1445555566655554211 112566777888888999999999998876543 22223233321
Q ss_pred ccCChhHHHHHHHHHHHhcCeEEeCCCCCCC---CCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 370 VSNTFEAEKELWKKIIFEVGLNISPGSSCHC---NEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 370 ~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~---~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+..+.. .|.++||.+.+|..+.. ...+.+||++.. .+++++++++++|++++++.
T Consensus 317 ------~~~~~~~-~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 317 ------DDMHKGS-AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp ------HHHHSSH-HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred ------cchHHHH-HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 0111223 34678999999886543 225789999975 68899999999999998765
No 204
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=3.9e-25 Score=223.97 Aligned_cols=288 Identities=13% Similarity=0.056 Sum_probs=186.0
Q ss_pred CCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEE
Q 037587 82 DYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPI 161 (464)
Q Consensus 82 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v 161 (464)
+.....++++.+|+ ++ .+ +++++|+|+++++..++.+++++||.|+++.|+|..+...+... |++++.+
T Consensus 55 ~~~~~~~~~~~la~-~g--------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~-G~~~~~v 123 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HS--------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDIS-QQEGHFI 123 (446)
T ss_dssp CSSHHHHHHHHHCS-CT--------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHH-TCCEEEC
T ss_pred cchHHHHHHHHHHh-cC--------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHc-CCeEEEE
Confidence 34455788888888 75 33 68999999999999999999999999999999999988888776 9999998
Q ss_pred ecCCCCC----cccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc-ccc
Q 037587 162 HCSSSNG----FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG-TVF 236 (464)
Q Consensus 162 ~~~~~~~----~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~-~~~ 236 (464)
+...+.+ +.+|++++ +. +++++|++++| |+||.+++ +++|+++|+++|+++|+||+|+. +.|
T Consensus 124 ~~~~~~~~~~~~~~d~~~l---~~------~~~~~v~~~~~-n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 124 ETHQSPLTNHYNKVNLSRL---NN------DGHKLVVLTYP-NYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EEEECTTTSSEEEEEC----------------CCEEEEESS-CTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred eCeeccccCcCCCCCHHHH---cC------CCceEEEEECC-CCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 8722223 56788877 22 27889999995 66999987 67888999999999999999986 223
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHH-HHHHHh-c--ccCCCChHHHHH
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVV-SAATKM-S--SFGLVSSQTQYL 312 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~-~~~~~~-~--~~~~~s~~~q~~ 312 (464)
.+. ..+...+ +..+++.|+||+++ ++.++||++++++.+. ..+... . ..++.+.....+
T Consensus 191 ~~~---~~~~~~~-------------g~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aa 253 (446)
T 2x3l_A 191 QGF---PDSTLNY-------------QADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMAS 253 (446)
T ss_dssp TTS---CCCGGGG-------------TCSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred CCC---CCChHHc-------------CCCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHH
Confidence 321 1222222 22378999999653 3344799998655332 122211 1 122233333323
Q ss_pred HHHHcCCchhhHHH-HHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeE
Q 037587 313 LSRMLSDKKFTCNY-MKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN 391 (464)
Q Consensus 313 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~ 391 (464)
+..+++ ++... .++..+...+..+.+.+ .|+++..+..+.++|+.++. .. ..++...|. ++||.
T Consensus 254 l~~a~~---~l~~~g~~~~~~~~~~l~~~l~~----~g~~~~~~~~~~~l~i~~~~-~~------~~~l~~~L~-~~GI~ 318 (446)
T 2x3l_A 254 LESAAQ---FYKTYDSTLFFAKRAQLIECLEN----KGFEMLQVDDPLKLLIKYEG-FT------GHDIQNWFM-NAHIY 318 (446)
T ss_dssp HHHHHH---HHHHCCCHHHHHHHHHHHHHHHH----HTCEEEECSSTTEEEEECTT-SC------HHHHHHHHH-HTTEE
T ss_pred HHHHHH---HHHHhCHHHHHHHHHHHHHHHHH----cCCEECcCCCCeEEEEEeCC-cC------HHHHHHHHH-HCCCE
Confidence 222221 11110 01122222333333333 37888766555589998861 11 224666665 55999
Q ss_pred Ee-CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 392 IS-PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 392 v~-pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+. +| .+++|++++. .+++++ +++++|+++++...
T Consensus 319 v~~~g-------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~~ 354 (446)
T 2x3l_A 319 LELAD-------DYQALAILPLWHHDDTY-LFDSLLRKIEDMIL 354 (446)
T ss_dssp ESEEC-------SSCEEEECCCCCTTCCC-CHHHHHHHHHTCCC
T ss_pred EEecC-------CCEEEEEeecCCCHHHH-HHHHHHHHHHHhhc
Confidence 97 44 3579999986 578889 99999999987664
No 205
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.91 E-value=7.2e-24 Score=215.45 Aligned_cols=301 Identities=11% Similarity=0.062 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGST-AANETLMFCLAD--PGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~-~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.++.+.+.+++.+.+| ++++ +++|+|++ .++..++.++.. +|+.|+++.+.|+.+...++.. |++++.+++
T Consensus 132 ~~~~~~~~~~la~~~g----~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~-G~~~~~v~~ 205 (456)
T 2z67_A 132 YALTNKILESFFKQLG----LNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFV-GMNMRLVET 205 (456)
T ss_dssp HHHHHHHHHHHHHHTT----CCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHT-TCEEEEECC
T ss_pred HHHHHHHHHHHHHHcC----CCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHc-CCCceEEEE
Confidence 4455556666666555 4555 99999999 455545555433 6778999999999888888776 999999886
Q ss_pred CC-CCCcccCHHHHHHHH-HHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SS-SNGFRITISALENAY-QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~-~~~~~~d~~~l~~~i-~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.+ ++++.+|+++|++++ +... ..++.+|++++||||||.+.+ +++|.++|+++|+++++|++|+...++..
T Consensus 206 ~~~~~~~~~d~~~l~~~i~~~~~--~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~-- 278 (456)
T 2z67_A 206 VLDGDRVYVPVEDIENAIKKEIE--LGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYL-- 278 (456)
T ss_dssp EEETTEEECCHHHHHHHHHHHHH--TTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHH--
T ss_pred eccCCCCCcCHHHHHHHHHHHhh--CCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhh--
Confidence 32 356889999999998 4211 126777888999999999955 67788888899999999999986433111
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCC-CC-hHHHHHHHHHcCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGL-VS-SQTQYLLSRMLSD 319 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~-~s-~~~q~~~~~~l~~ 319 (464)
+....... . ...+++.|++|.++ +++++||++++++.+.+.+......+. .+ .+.+.++...+.
T Consensus 279 --~~~~~~~~---------~-~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~- 344 (456)
T 2z67_A 279 --EKLKKAFK---------Y-RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG- 344 (456)
T ss_dssp --HHHHHHHT---------S-CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-
T ss_pred --HHHHHhhC---------C-CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-
Confidence 11111111 0 22356789999764 678999999966555544432221111 11 233333333332
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEec--CcccccCChhHHHHHHHHHHHhcCe---
Q 037587 320 KKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDM--RHLLVSNTFEAEKELWKKIIFEVGL--- 390 (464)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l--~~~~~~~~~~~~~~l~~~ll~~~gI--- 390 (464)
.+.+++..+.+.+.++++.+.|++. |+.+.+++ + ++++.+ +.. ..++...|. ++||
T Consensus 345 ----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~-~-~v~~~~~~~~~--------~~~l~~~L~-~~gi~~~ 409 (456)
T 2z67_A 345 ----SKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE-S-PIASCISVNSD--------PVEIAAKLY-NLRVTGP 409 (456)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC-C-SSEEEEECSSC--------HHHHHHHHH-HTTEESC
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCCC-C-eEEEEEecccH--------HHHHHHHHH-HcCCCcc
Confidence 2345677778888889999999887 88777777 4 556666 321 124666665 5565
Q ss_pred EEe------CCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 391 NIS------PGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 391 ~v~------pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
.+. +|..|.....+++|++++. .+++++++++++|++++
T Consensus 410 rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 410 RGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp EEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred eEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 443 2333333335799999985 68999999999998754
No 206
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.91 E-value=9.8e-24 Score=211.96 Aligned_cols=280 Identities=18% Similarity=0.134 Sum_probs=184.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh----hcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR----DLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~~g~~~~~v 161 (464)
..+|++.+|++++ . +..++++++++++..++.+++++||.|++++|+|.++.. .+... |++++.+
T Consensus 84 ~~~le~~lA~l~g--------~--~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~-G~~~~~v 152 (430)
T 3ri6_A 84 VEDLEQRLKNLTG--------A--LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSF-GIEVRFV 152 (430)
T ss_dssp HHHHHHHHHHHHT--------C--SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHC--------C--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHc-CCEEEEe
Confidence 4677888888764 2 235566666799999999999999999999999987776 44556 9999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+...+.
T Consensus 153 ~~~-------d~~~l~~ai~~------~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~---- 212 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDE------TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL---- 212 (430)
T ss_dssp CTT-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----
T ss_pred CCC-------CHHHHHHhhCC------CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 864 78999888754 8999999999999999986 667888899999999999999843221
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEe--cCHHH-------------------HHHHHH-h
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYS--NNERV-------------------VSAATK-M 299 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~--~~~~~-------------------~~~~~~-~ 299 (464)
....+ +..+++.|+||.+|.+|..+|.++. .+... .+.... .
T Consensus 213 ---~~~~~-------------g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~ 276 (430)
T 3ri6_A 213 ---EAKRL-------------GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVF 276 (430)
T ss_dssp ---CGGGG-------------TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHH
T ss_pred ---ChHHc-------------CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHH
Confidence 11111 4568899999999866655555544 22111 111111 1
Q ss_pred cccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecCC----------------ccEE
Q 037587 300 SSFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-CLKSN----------------AGLF 360 (464)
Q Consensus 300 ~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~----------------~g~f 360 (464)
..+. ..++....++... .+.+..+.++..++...+.+.|+++ ++. |..|. ||+.
T Consensus 277 ~~~g~~~~~~~a~l~l~~-------l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~ 349 (430)
T 3ri6_A 277 QNLGPSLSPHNAYLQSLG-------LETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSI 349 (430)
T ss_dssp HHHCCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred HhcCCCCCHHHHHHHHhh-------hhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceE
Confidence 1222 2333333222221 1224445556667778888888876 454 44333 5558
Q ss_pred EEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCC---------------------CCCCeEEEEeecCCHHHHH
Q 037587 361 CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHC---------------------NEPGWFRICFANITEETLQ 419 (464)
Q Consensus 361 ~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~---------------------~~~~~~Ris~~~~~~e~l~ 419 (464)
+|++++.. ....+++..+ +-.++.+.+|..+.. ..++++|||++. |+.+
T Consensus 350 lsf~l~~~------~~~~~~~~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~ 419 (430)
T 3ri6_A 350 LTFELESK------EASYRFMDAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIE 419 (430)
T ss_dssp EEEECSSH------HHHHHHHHHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHH
T ss_pred EEEEECCH------HHHHHHHHhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHH
Confidence 99999721 2222333333 234566677776652 135789999985 4455
Q ss_pred HHHHHHHHHH
Q 037587 420 VALQRIKVFA 429 (464)
Q Consensus 420 ~~l~~l~~~l 429 (464)
.+++.|++++
T Consensus 420 dl~~dl~~al 429 (430)
T 3ri6_A 420 DLKEDILQAL 429 (430)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 5666666554
No 207
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.90 E-value=2e-22 Score=207.14 Aligned_cols=316 Identities=11% Similarity=0.163 Sum_probs=210.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCC-CcEEEeCChHHHHHHHHHHh----c---------CC------CC-eEEE
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDP-NKLVLTAGSTAANETLMFCL----A---------DP------GD-AFLL 138 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~l----~---------~~------gd-~Vlv 138 (464)
|....+..++.+.+.+++.+.+| +++ +.+++|+|+++++..++.++ + .+ |+ .|++
T Consensus 132 ~~~~~~~~~le~~~~~~la~~~g----~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~ 207 (497)
T 2qma_A 132 WDQASSATYVEQKVVNWLCDKYD----LSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVC 207 (497)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHTT----CCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEE
T ss_pred hhhChHHHHHHHHHHHHHHHHhC----CCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEE
Confidence 44333456777787777777765 344 78999999999999988873 3 12 46 7999
Q ss_pred cCCCCCChhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHH
Q 037587 139 PTPYYPGFDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLI 215 (464)
Q Consensus 139 ~~p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~ 215 (464)
+.++|..+...+... |. +++.+|++ .++.+|+++|++.+++....+.++.+|++++|+||||... ++++|.
T Consensus 208 s~~~h~s~~~~~~~~-g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~---~l~~I~ 281 (497)
T 2qma_A 208 SKKSHFTVQKSASWM-GLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAID---DLDFIA 281 (497)
T ss_dssp ETTSCTHHHHHHHHT-TSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC---CHHHHH
T ss_pred CCCchHHHHHHHHHc-CCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCC---CHHHHH
Confidence 999998887777665 65 78999986 3678999999999976433333355888899999999974 477888
Q ss_pred HHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHH
Q 037587 216 NFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSA 295 (464)
Q Consensus 216 ~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~ 295 (464)
++|+++|+++++|++|+...+... +.. ....+ ....+++.|++|.++.| .++|+++++++...+.
T Consensus 282 ~l~~~~~~~l~vD~a~~~~~~~~~---~~~---~~~gi--------~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~ 346 (497)
T 2qma_A 282 DMAVKHDMWMHVDGAYGGALILSS---HKS---RLKGV--------ERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKF 346 (497)
T ss_dssp HHHHHHTCEEEEEETTGGGGGGST---TGG---GGTTG--------GGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGG
T ss_pred HHHHHcCCEEEEehhhhHHHHhCc---chH---hhcCc--------ccCCEEEEcchhccCCC-cceEEEEEeCHHHHHH
Confidence 999999999999999987544221 111 11111 02235678999998745 6999999866543222
Q ss_pred HHHhcccC-C-----C-------------ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeee-c
Q 037587 296 ATKMSSFG-L-----V-------------SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCL-K 354 (464)
Q Consensus 296 ~~~~~~~~-~-----~-------------s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~ 354 (464)
+.....+. . . ..+.+.++...+. .+.+++..+.+.+.++++.+.|++. ++++. +
T Consensus 347 ~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~ 421 (497)
T 2qma_A 347 LLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVG-----PKALGDMYDHLLAQTLEVADMIRTNDQFELLAE 421 (497)
T ss_dssp GCC--------------------CCSCCCTHHHHHHHHHHTC-----HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSC
T ss_pred hcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcC
Confidence 11101110 0 0 1223333334443 2335566677778889999999986 78774 5
Q ss_pred CCccEEEEEecCcccccCChh-HHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHHHHHHHh
Q 037587 355 SNAGLFCWVDMRHLLVSNTFE-AEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 355 ~~~g~f~~~~l~~~~~~~~~~-~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l~~~l~~ 431 (464)
+.++ ++++++.... .... ...++...+. +.|+.+.++..+. +.+++|+++ +. .++++++.++++|++++++
T Consensus 422 ~~~~-~v~f~~~~~~--~~~~~l~~~l~~~l~-~~G~~~~~~~~~~--g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 422 PSLS-TVLFRATHET--ADLDELNKALRLEAL-TRGIAVLGETIVD--GKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp CSSS-EEEEEECCSS--SCHHHHHHHHHHHHH-HHTSCBCEEEEET--TEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCce-EEEEEEcCCc--cCHHHHHHHHHHHHH-hCCCEEEEeeEEC--CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 6666 6666765321 1111 1123555554 5699887654432 356899998 33 6899999999999998865
No 208
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=3.7e-22 Score=197.69 Aligned_cols=292 Identities=17% Similarity=0.189 Sum_probs=191.8
Q ss_pred CcHHHHHHH-HHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 85 GFPDAKKEL-VKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-ADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 85 g~~~lr~~i-a~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
...+|++++ |++++ ..+++++++|+++++..++.++ +++||.|+++.|+|..+...+... |++++.++
T Consensus 37 ~~~~l~~~~~a~~~g---------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~-G~~~~~v~ 106 (377)
T 3ju7_A 37 INQRFEQTIMSGFFQ---------NRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPLAAIWC-GLEPYFID 106 (377)
T ss_dssp HHHHHHHHHHHHTST---------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHHHHHHhC---------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHHHHc-CCEEEEEe
Confidence 358899999 98874 2567899999999999999998 899999999999999998888777 99999999
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCc--eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLK--VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~--~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
+++ ++|.+|++++++++... + +++|+ |+||+|...+ +++|.++|+ +|+++|+|++|+.......
T Consensus 107 ~~~-~~~~~d~~~l~~~i~~~-----~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~~- 172 (377)
T 3ju7_A 107 ISI-DDWYMDKTVLWDKIEEL-----KEEVAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNGG- 172 (377)
T ss_dssp BCT-TTCSBCHHHHHHHHHHH-----GGGEEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEETT-
T ss_pred cCC-ccCCcCHHHHHHHHhcC-----CCCceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeECC-
Confidence 874 46889999999988321 4 88766 6789999876 566777888 9999999999973221111
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcC--CCcCCCCCccEEEEEEecCHHHHHHHHHhccc--------------CC
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYS--LSKDFSMPGFRVGMIYSNNERVVSAATKMSSF--------------GL 304 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S--~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~--------------~~ 304 (464)
..+... ..+ +.+.| .+|.++ +| +.|+++++++.+.+.++.+..+ ..
T Consensus 173 ---~~~g~~-----------~~d--~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~ 234 (377)
T 3ju7_A 173 ---MHYGQD-----------FSG--MIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCK 234 (377)
T ss_dssp ---EETTTT-----------CSS--EEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCC
T ss_pred ---EeccCC-----------CCc--EEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCC
Confidence 111000 012 33445 479998 46 6889988888777766665432 12
Q ss_pred CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CeeecCCc--c--EEEEEecCcccccCChhHH
Q 037587 305 VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAG---IRCLKSNA--G--LFCWVDMRHLLVSNTFEAE 377 (464)
Q Consensus 305 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g---~~~~~~~~--g--~f~~~~l~~~~~~~~~~~~ 377 (464)
++.+.++++...+.. ++...++.++.++++.+.|.+++ +.+.+..+ . .|+.+.++... ..
T Consensus 235 ~~~~~aa~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 301 (377)
T 3ju7_A 235 MSEYAAAIGIATMKK-------WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV------RN 301 (377)
T ss_dssp CCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS------CH
T ss_pred CCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh------hH
Confidence 444444444444432 23333344445555666776663 33332221 1 13344554311 11
Q ss_pred HHHHHHHHHhcCeEEeCCCC--CCCC--------C---------CCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 378 KELWKKIIFEVGLNISPGSS--CHCN--------E---------PGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~pg~~--f~~~--------~---------~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.++...| +++||.++.+.. ++.. . .+.+|+.+.. +++++++.+++.|++++.+.
T Consensus 302 ~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 302 KQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 2455555 678999987652 1110 0 2369999976 79999999999999888764
No 209
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.90 E-value=1.2e-21 Score=202.01 Aligned_cols=321 Identities=12% Similarity=0.146 Sum_probs=210.3
Q ss_pred CCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC------eEEEcCCCCCC
Q 037587 80 FQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLA-------D-PGD------AFLLPTPYYPG 145 (464)
Q Consensus 80 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~-------~-~gd------~Vlv~~p~y~~ 145 (464)
|....+..++.+.+.+++.+.+| ++++++++|+|+++++..++.++. + +|+ .|+++.++|+.
T Consensus 140 ~~~s~~~~~le~~~~~~la~l~g----~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 140 YEIAPVFVLMEEEVLRKLRALVG----WSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHT----CSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhhchHHHHHHHHHHHHHHHHhC----CCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 43333445666666666666555 457899999999999998888763 2 575 89999999988
Q ss_pred hhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 146 FDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 146 ~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
+...+... |. +++.+|+++ ++.+|+++|++++++....+.++++|++++|+||||.+.+ +++|.++|+++|
T Consensus 216 ~~~~~~~~-g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~g 289 (515)
T 2jis_A 216 IQKGAAFL-GLGTDSVRVVKADE--RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRHG 289 (515)
T ss_dssp HHHHHHHT-TSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHT
T ss_pred HHHHHHHc-CCCCCcEEEEecCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHcC
Confidence 88877766 77 899999863 5789999999999865444556899999999999999865 778888999999
Q ss_pred eEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCH--HHHHHHHHhc
Q 037587 223 IHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE--RVVSAATKMS 300 (464)
Q Consensus 223 ~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~--~~~~~~~~~~ 300 (464)
+++++|++|+...+..+ .+.. .+... ....+++.|++|.++ .+.++|+++++++ .+...+....
T Consensus 290 ~~l~vD~a~~~~~~~~~--~~~~---~~~g~--------~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~~~~~~~ 355 (515)
T 2jis_A 290 LWLHVDAAWGGSVLLSQ--THRH---LLDGI--------QRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKRCHGSQA 355 (515)
T ss_dssp CEEEEEETTGGGGGGCT--TTGG---GGTTG--------GGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHHHHCC--
T ss_pred CeEEEehhhhhHHHhCh--hhHh---hcCCC--------ccCCEEEECcccccC-CCCCeeEEEEeChHHHHHHHhcCCc
Confidence 99999999997655433 2221 11110 123467889999987 4467999998765 3332211000
Q ss_pred ccC------------------C----CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeec-CC
Q 037587 301 SFG------------------L----VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLK-SN 356 (464)
Q Consensus 301 ~~~------------------~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~ 356 (464)
.+. . ...+.+.++..++. .+.+++..+...+.++++.+.|++. |+++.. +.
T Consensus 356 ~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~ 430 (515)
T 2jis_A 356 SYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFELVMEPE 430 (515)
T ss_dssp -------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCS
T ss_pred hhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Confidence 000 0 11334444444443 2335666677778888999999887 887764 44
Q ss_pred ccEEEEEecCccccc----CChhHHH-----HHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEe-ec-CCHHHHHHHHHHH
Q 037587 357 AGLFCWVDMRHLLVS----NTFEAEK-----ELWKKIIFEVGLNISPGSSCHCNEPGWFRICF-AN-ITEETLQVALQRI 425 (464)
Q Consensus 357 ~g~f~~~~l~~~~~~----~~~~~~~-----~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~-~~-~~~e~l~~~l~~l 425 (464)
.+.+++..+|..... ....... .+...+. +.|+........ ....+++|+++ +. .++++++.++++|
T Consensus 431 ~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~-~~~~~~lRis~~~~~~t~edid~~~~~l 508 (515)
T 2jis_A 431 FVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPH-GTRGNFFRVVVANSALTCADMDFLLNEL 508 (515)
T ss_dssp SSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEE-TTEEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred eeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEE-CCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 555555444432211 1111111 2444454 457654311100 11246899999 44 6899999999999
Q ss_pred HHHHHh
Q 037587 426 KVFAQS 431 (464)
Q Consensus 426 ~~~l~~ 431 (464)
++++++
T Consensus 509 ~~~~~~ 514 (515)
T 2jis_A 509 ERLGQD 514 (515)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 988754
No 210
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.89 E-value=9e-22 Score=196.22 Aligned_cols=280 Identities=16% Similarity=0.168 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc-----cCCCcEEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK-----WRPGVEIVPI 161 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-----~~~g~~~~~v 161 (464)
.+|++.++++++ .+.+++++++++++.. +..++++||.|+++.|+|++....+. .. |++++.+
T Consensus 70 ~~l~~~la~l~g----------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~-g~~~~~v 137 (400)
T 3nmy_A 70 FAYERCVAALEG----------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTA-GLDFSFV 137 (400)
T ss_dssp HHHHHHHHHHHT----------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHH-CCEEEEE
T ss_pred HHHHHHHHHHhC----------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhc-CeEEEEE
Confidence 566667776653 2356777777999998 56788999999999999985554432 24 8999988
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....+..+
T Consensus 138 ~~~-------d~~~l~~~i~~------~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~-- 199 (400)
T 3nmy_A 138 DLT-------DPAAFKAAIRA------DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRP-- 199 (400)
T ss_dssp CTT-------SHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCG--
T ss_pred CCC-------CHHHHHHHhcc------CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCCh--
Confidence 764 78999888754 7899999999999999986 78888899999999999999975322211
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEE--EEecCHHHHHHHHHhccc--CCCChHHHHHHHHHc
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGM--IYSNNERVVSAATKMSSF--GLVSSQTQYLLSRML 317 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~--l~~~~~~~~~~~~~~~~~--~~~s~~~q~~~~~~l 317 (464)
. .+ +.++++.|+||.+|.+|.++|. ++..++.+.+.+...... ...++....++...+
T Consensus 200 --~---~~-------------g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l 261 (400)
T 3nmy_A 200 --L---SL-------------GADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGL 261 (400)
T ss_dssp --G---GG-------------TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHH
T ss_pred --h---hc-------------CCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhH
Confidence 1 11 4558899999999877777755 555566665555443322 234566655555555
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCe-eecC----------------CccEEEEEecCcccccCChhHHHH
Q 037587 318 SDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIR-CLKS----------------NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~----------------~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+. +..+.+...++...+.+.|+++ .+. +..| ..|.+++++++... .....
T Consensus 262 ~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~-----~~~~~ 329 (400)
T 3nmy_A 262 KT-------LPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF-----DAAKR 329 (400)
T ss_dssp TT-------HHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH-----HHHHH
T ss_pred hH-------HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH-----HHHHH
Confidence 43 2334455566777788888776 332 3221 23568889886321 11112
Q ss_pred HHHHHHHhcCeEEeCCCCCC----------C-----------CCCCeEEEEeecCCHHHHHHHHHHHHHHHH
Q 037587 380 LWKKIIFEVGLNISPGSSCH----------C-----------NEPGWFRICFANITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~----------~-----------~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~ 430 (464)
++..+ +-.++.+..|..+. . -.++.+|+|++. |+.+.+++.|+++++
T Consensus 330 ~~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 330 FCEKT-ELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp HHHHC-SSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred HHHcC-CcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 22222 22233344443322 0 125789999996 345556667777765
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.89 E-value=2e-22 Score=201.65 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=147.7
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh----cccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD----LKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~~g~~~~~v 161 (464)
..++++.+|++++ . +++++++|+++++.+++.+++++||.|+++.|.|.+.... ++.. |+++..+
T Consensus 84 ~~~le~~lA~l~g--------~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~-G~~v~~v 152 (415)
T 2fq6_A 84 HFSLQQAMCELEG--------G--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKL-GVTTSWF 152 (415)
T ss_dssp HHHHHHHHHHHHT--------C--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGG-TCEEEEE
T ss_pred HHHHHHHHHHHhC--------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CcEEEEE
Confidence 3568888888875 2 3577788999999999999999999999999999876643 3445 9999888
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhh--CCeEEEEeccccccccCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKS--KRIHIVSDEIYSGTVFDSP 239 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~--~~~~lI~Deay~~~~~~~~ 239 (464)
+.+ |++++++++++ ++++|++++|+||||.+++ +++|+++|++ +|+++|+|++|+...+ ..
T Consensus 153 ~~~-------d~~~le~ai~~------~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~~ 215 (415)
T 2fq6_A 153 DPL-------IGADIVKHLQP------NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-FK 215 (415)
T ss_dssp CTT-------CGGGGGGGCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-SC
T ss_pred CCC-------CHHHHHHhhcc------CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-CC
Confidence 753 67888887754 7899999999999999986 6778889999 9999999999985322 11
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccE-EEEEEecCHHHHHHHHHhcc-cC-CCChHHHHHHHHH
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFR-VGMIYSNNERVVSAATKMSS-FG-LVSSQTQYLLSRM 316 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR-iG~l~~~~~~~~~~~~~~~~-~~-~~s~~~q~~~~~~ 316 (464)
++ .+ +..+++.|+||.+|.+|.+ +||++++++ +.+.+..... +. ..++....++...
T Consensus 216 -----p~-~~-------------g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~~~~~~a~~~~~~ 275 (415)
T 2fq6_A 216 -----AL-DF-------------GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQMVDADTAYITSRG 275 (415)
T ss_dssp -----GG-GG-------------TCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred -----cc-cc-------------CCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 11 12 4568899999999977755 699998654 3333333222 22 2344433333222
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC
Q 037587 317 LSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA 348 (464)
Q Consensus 317 l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 348 (464)
++ .+..+.+...++...+.+.|++.
T Consensus 276 l~-------~l~~r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 276 LR-------TLGVRLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hh-------HHHHHHHHHHHHHHHHHHHHHcC
Confidence 22 23444455566667777777765
No 212
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.89 E-value=1.5e-21 Score=198.28 Aligned_cols=303 Identities=12% Similarity=0.086 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCc---EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh--------hcccCCC
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNK---LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR--------DLKWRPG 155 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~---i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~~g 155 (464)
.+|.+...+++.+.+| ++.+. .+.++++++++..++.++++|||+|+++++.|.++.. .+... |
T Consensus 99 ~~lE~~a~~~~a~l~g----~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~-g 173 (490)
T 2a7v_A 99 DEIELLCQRRALEAFD----LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISAT-S 173 (490)
T ss_dssp THHHHHHHHHHHHHTT----CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------
T ss_pred HHHHHHHHHHHHHHcC----CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHc-C
Confidence 4666444455555544 45542 3455678999999999999999999999999865431 12223 5
Q ss_pred cE--EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc-
Q 037587 156 VE--IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS- 232 (464)
Q Consensus 156 ~~--~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~- 232 (464)
.. ++.+++++ ..+.+|++++++.+... ++++|+++.|+||+. . ++++|.++|+++|+++++|+++.
T Consensus 174 ~~~~~~~~~vd~-~~~~iD~d~le~~l~~~-----~~klIi~~~s~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~ 242 (490)
T 2a7v_A 174 IFFESMPYKLNP-KTGLIDYNQLALTARLF-----RPRLIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHIS 242 (490)
T ss_dssp -------CCBCT-TTCSBCHHHHHHHHHHH-----CCSEEEECCSSCCSC--C---CHHHHHHHHHHTTCEEEEECGGGH
T ss_pred CeEEEEeccccc-ccCCcCHHHHHHHHhhc-----CCcEEEEcCCCCCCc--c---cHHHHHHHHHHcCCEEEEcccccc
Confidence 44 34444443 35689999999998653 678888888898863 2 47889999999999999999975
Q ss_pred ccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCH--------------HHHHHHHH
Q 037587 233 GTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE--------------RVVSAATK 298 (464)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~--------------~~~~~~~~ 298 (464)
++.+.+. . .+.. . ...+++.|+||++ .|.|.|+++++++ .+.+.+++
T Consensus 243 glv~~g~--~-~~~~---~-----------~aDiv~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~ 303 (490)
T 2a7v_A 243 GLVAAKV--I-PSPF---K-----------HADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINF 303 (490)
T ss_dssp HHHHTTS--S-CCGG---G-----------TCSEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHH
T ss_pred ccccCCc--C-CCCC---C-----------CCCEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHH
Confidence 2222222 1 1111 1 1236789999987 4667799998653 23444443
Q ss_pred hcccC---CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcccccCCh
Q 037587 299 MSSFG---LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHLLVSNTF 374 (464)
Q Consensus 299 ~~~~~---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~~~~~~~ 374 (464)
..... ..+.....++..++... ..+..++..+++.++++++.+.|.+.|+++.. +..++++|++++....
T Consensus 304 ~~~~g~qggp~~~~iaAla~Al~~~--~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~---- 377 (490)
T 2a7v_A 304 AVFPSLQGGPHNHAIAAVAVALKQA--CTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGL---- 377 (490)
T ss_dssp HHTTTTCCSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTC----
T ss_pred HhcccCCCCchHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCC----
Confidence 32221 12333333333333321 11234566777788889999999999998875 3345688999864210
Q ss_pred hHHHHHHHHHHHhcCeEEeCCCCCC---CCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHhh
Q 037587 375 EAEKELWKKIIFEVGLNISPGSSCH---CNEPGWFRICFAN-----ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 375 ~~~~~l~~~ll~~~gI~v~pg~~f~---~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~~ 432 (464)
. . +.+..+|++.||.+..+..++ +..++.+||+... .++++++++++.|.+++...
T Consensus 378 ~-~-~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 378 D-G-ARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp C-H-HHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred C-H-HHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence 1 1 124555678899998543332 2235679997732 47899999999999988754
No 213
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.89 E-value=2.3e-21 Score=198.17 Aligned_cols=322 Identities=11% Similarity=0.074 Sum_probs=220.9
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHHcCCCCCC------CCCcEEEeCChHHHHHHHHHHhcC-------------------C
Q 037587 78 ALFQDYHGFPDAKKELVKLMARIRGNKVKF------DPNKLVLTAGSTAANETLMFCLAD-------------------P 132 (464)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~------~~~~i~it~G~~~al~~~~~~l~~-------------------~ 132 (464)
..|....+..++++.+++++.+.+|.+... .....++|+|+++++..++.+... +
T Consensus 108 ~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~ 187 (481)
T 4e1o_A 108 FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNA 187 (481)
T ss_dssp SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHT
T ss_pred CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccC
Confidence 456666677899999999999988732110 013678999999999988877532 5
Q ss_pred CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHH
Q 037587 133 GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELN 212 (464)
Q Consensus 133 gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~ 212 (464)
++.|+++.++|..+...+... |.+++.+|++ .++.+|+++|+++|++....+..+.+|+++.++|+||.+ ++++
T Consensus 188 ~~~v~~s~~~H~s~~~~~~~~-g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~i---d~l~ 261 (481)
T 4e1o_A 188 RLVAYASDQAHSSVEKAGLIS-LVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF---DCLS 261 (481)
T ss_dssp TEEEEEETTSCHHHHHHHHHH-TCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHH
T ss_pred CeEEEEcCcchHHHHHHHHhC-CCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCc---CCHH
Confidence 679999999999888888766 9999999986 467899999999998754444457888999999999988 4588
Q ss_pred HHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH
Q 037587 213 HLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV 292 (464)
Q Consensus 213 ~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~ 292 (464)
+|+++|+++|+++++|++|+...+..+ .+.. +.... .....+..+++|.++.| .-+|+++..++..
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~~--~~~~---~~~gi--------~~aDsi~~~~hK~l~~p-~g~g~l~~~~~~~ 327 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLCP--EFRG---FLKGI--------EYADSFTFNPSKWMMVH-FDCTGFWVKDKYK 327 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGSG--GGGG---GGTTG--------GGCSEEEECHHHHSSCC-SSCEEEEESBHHH
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhCh--hhHH---HhcCc--------ccCCEEEEChHHhcCCC-CceEEEEEeCHHH
Confidence 899999999999999999986533322 1222 11110 01234567999998755 4578887766654
Q ss_pred HH-HHHHhcccC------------------C--CChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Q 037587 293 VS-AATKMSSFG------------------L--VSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GI 350 (464)
Q Consensus 293 ~~-~~~~~~~~~------------------~--~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~ 350 (464)
.. .+.....+. + ...+.+.++...+. .+.+++..+...++++++.+.|++. |+
T Consensus 328 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~ 402 (481)
T 4e1o_A 328 LQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVRNDPSF 402 (481)
T ss_dssp HHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred HHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 32 111111110 0 12344444444442 3346667777888889999999987 88
Q ss_pred eeecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHH
Q 037587 351 RCLKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVF 428 (464)
Q Consensus 351 ~~~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~ 428 (464)
++..+....+++++++.. .....++..++.++..+.+.|+... +..++|++++. .++++++.++++|+++
T Consensus 403 ~~~~~~~~~~v~f~~~~~-----~~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 474 (481)
T 4e1o_A 403 EIPAKRHLGLVVFRLKGP-----NSLTENVLKEIAKAGRLFLIPATIQ---DKLIIRFTVTSQFTTRDDILRDWNLIRDA 474 (481)
T ss_dssp ECCSCCCSSEEEEEESSC-----HHHHHHHHHHHHHHCSSBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEecCCceeEEEEEeCCc-----hHHHHHHHHHHHhCCeEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 886544444777777531 1223457777765533555554322 35689999865 4789999999999998
Q ss_pred HHhh
Q 037587 429 AQSC 432 (464)
Q Consensus 429 l~~~ 432 (464)
+++.
T Consensus 475 ~~~l 478 (481)
T 4e1o_A 475 ATLI 478 (481)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 214
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.89 E-value=8.5e-22 Score=200.90 Aligned_cols=351 Identities=14% Similarity=0.124 Sum_probs=211.9
Q ss_pred CCCCCCCCceEEeeccccc--c--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQ--L--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||..+... + .+|.+.+++.+...... ......|+. ....++++++++.+.+..+
T Consensus 56 ~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~--------~~~~~~~~~-~~~~~l~~~la~~l~~~~~-- 124 (472)
T 1ohv_A 56 YLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVST--------FINRPALGI-LPPENFVEKLRESLLSVAP-- 124 (472)
T ss_dssp EEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHH--------HHCCCCTTT-SCBTTHHHHHHHTGGGGCC--
T ss_pred EEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcc--------ccccccccc-ccHHHHHHHHHHHHHHhCC--
Confidence 4444456678999876432 3 35667777766422100 011123432 2357899999997765432
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--------C-----------------CC---CeEEEcCCCCCChhhhcccCCCc
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--------D-----------------PG---DAFLLPTPYYPGFDRDLKWRPGV 156 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--------~-----------------~g---d~Vlv~~p~y~~~~~~~~~~~g~ 156 (464)
...++|++++|+++++..+++++. . || +.|++.+++|+++...+....|.
T Consensus 125 --~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~ 202 (472)
T 1ohv_A 125 --KGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHS 202 (472)
T ss_dssp --TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCS
T ss_pred --CCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCC
Confidence 356799999999999999998773 1 46 89999999998876544222122
Q ss_pred E-------------EEEEecC--C-CCC--c-----ccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCC-CCCHHHHH
Q 037587 157 E-------------IVPIHCS--S-SNG--F-----RITISALENAYQQAQTLNLKVKGVLITNPSNPLGT-AMTHQELN 212 (464)
Q Consensus 157 ~-------------~~~v~~~--~-~~~--~-----~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~-~~s~~~l~ 212 (464)
. .+++|.. + ... + ..|++.|++.+++....+.++++|++...+|++|. ..+.+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~ 282 (472)
T 1ohv_A 203 KAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFR 282 (472)
T ss_dssp CHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHH
T ss_pred ccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHH
Confidence 1 1122210 0 000 1 12578888888653211226777666555788996 56789999
Q ss_pred HHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH
Q 037587 213 HLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV 292 (464)
Q Consensus 213 ~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~ 292 (464)
+|.++|+++|+++|+||+|.++.+.+. +.....+ . . ...+.+.||||.+ +.| ||++ ++ .+
T Consensus 283 ~l~~l~~~~g~lli~DEv~~g~g~~g~---~~~~~~~-g---------v-~~~~Di~t~sK~~-l~G---G~~~-~~-~~ 342 (472)
T 1ohv_A 283 KLRDISRKHGCAFLVDEVQTGGGSTGK---FWAHEHW-G---------L-DDPADVMTFSKKM-MTG---GFFH-KE-EF 342 (472)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTSS---SSGGGGG-C---------C-SSCCSEEEECGGG-SSE---EEEE-CG-GG
T ss_pred HHHHHHHHhCCEEEEeCcccCCCCCCC---chhcccc-C---------C-CCCCCEEEEcccc-ccC---CccC-ch-hh
Confidence 999999999999999999986433221 1122111 0 0 0002244899995 445 7776 33 33
Q ss_pred HHHHHHhccc--CCCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC--C----CeeecCCccEEEEEe
Q 037587 293 VSAATKMSSF--GLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA--G----IRCLKSNAGLFCWVD 364 (464)
Q Consensus 293 ~~~~~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~~~~~~~~g~f~~~~ 364 (464)
.. ......+ +..+++++.++.++|+... + +...+.++++++++.+.|+++ + +....+.+ .|++++
T Consensus 343 ~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g-~~~~~~ 415 (472)
T 1ohv_A 343 RP-NAPYRIFNTWLGDPSKNLLLAEVINIIK---R--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRG-TFCSFD 415 (472)
T ss_dssp SC-SSSSSSCCSSSSCHHHHHHHHHHHHHHH---H--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEET-TEEEEE
T ss_pred cc-cccccccCccCccHHHHHHHHHHHHHHH---h--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCc-eEEEEE
Confidence 21 1111111 2356788887777665211 0 122344455555555555543 1 33344554 477778
Q ss_pred cCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 365 MRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 365 l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++.. ....+++..|+ ++||.+.|+. .+++||+++. .+++++++++++|++++++.
T Consensus 416 ~~~~------~~~~~~~~~l~-~~Gv~~~~~g------~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 416 TPDE------SIRNKLISIAR-NKGVMLGGCG------DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp CSSH------HHHHHHHHHHH-HTTEECEEET------TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred eCCh------hHHHHHHHHHH-HCCeEEecCC------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 7631 22345777776 5799999852 4689998876 78999999999999998764
No 215
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.88 E-value=1.9e-21 Score=194.53 Aligned_cols=254 Identities=13% Similarity=0.117 Sum_probs=175.7
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChh-------
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL---TAGSTAANETLMFCLADPGDAFLLPT-PYYPGFD------- 147 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~------- 147 (464)
.|++. |..+|++.+|++++ .+ ..++ ++|+++++..++.++++|||+|++++ |.|..+.
T Consensus 69 ~y~~~-~~~~Le~~lA~l~g--------~e--~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 69 GYGDI-GRDSLDAVYARVFN--------TE--SALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT--------CS--EEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSC
T ss_pred CCCHH-HHHHHHHHHHHHhC--------Cc--ceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccc
Confidence 34443 46778888888875 22 2345 78889999999999999999999999 9998776
Q ss_pred ----hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC----CCCCCCCCCCHHHHHHHHHHHh
Q 037587 148 ----RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN----PSNPLGTAMTHQELNHLINFSK 219 (464)
Q Consensus 148 ----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~----P~NPtG~~~s~~~l~~i~~~~~ 219 (464)
..+... |++++.+++++ ++.+|++++++++++ .+++++|++++ |+||||.+ .++++|+++|+
T Consensus 138 ~~~~~~l~~~-G~~~~~v~~~~--~g~~D~e~l~~~l~~----~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~ 207 (427)
T 3i16_A 138 NSNMGSLKEF-GINYKQVDLKE--DGKPNLEEIEKVLKE----DESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVK 207 (427)
T ss_dssp CCSSCCTGGG-TCEEEECCCCT--TSSCCHHHHHHHHHT----CTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred cchHHHHHHc-CCEEEEecCcc--CCCcCHHHHHHHhhC----CCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHH
Confidence 334445 99999998864 356899999999872 12899999999 99999876 78999999999
Q ss_pred h--CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHH
Q 037587 220 S--KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAA 296 (464)
Q Consensus 220 ~--~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~ 296 (464)
+ +|+++|+|++|+.+.+... + . .. +..++++|+||.+|.+| .+.||++++ +.+.+.+
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~--p-~---~~-------------gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l 267 (427)
T 3i16_A 208 NIRKDIICFVDNCYGEFMDTKE--P-T---DV-------------GADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKT 267 (427)
T ss_dssp HHCTTSEEEEECTTTTTSSSSC--G-G---GG-------------TCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHH
T ss_pred HhCCCCEEEEECCCccccccCC--c-c---cc-------------CCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHH
Confidence 9 9999999999986543322 1 1 11 34588999999998555 667999995 5555555
Q ss_pred HHh-cccC---CCCh-HHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCcc----EEEEEecCc
Q 037587 297 TKM-SSFG---LVSS-QTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAG----LFCWVDMRH 367 (464)
Q Consensus 297 ~~~-~~~~---~~s~-~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~f~~~~l~~ 367 (464)
+.. .... ..++ +. ++..+++. .+....++++..+++..+.+.|+++|++++|+.+. ..+.+.+..
T Consensus 268 ~~~~~~~~~g~~~~~~~~--~a~~~l~g----l~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 268 SYRLTVPGIGGECGSTFG--VVRSMYQG----LFLAPHISMEALKGAILCSRIMELAGFEVMPKYDEKRSDIIQSIKFND 341 (427)
T ss_dssp HHHHSCTTTGGGCCCCTT--CHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCEEEECSS
T ss_pred HHhcccCccCccCCccHH--HHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCccEEEEEEECC
Confidence 442 1111 0111 11 01111211 12245566777888899999999999988765332 255566642
Q ss_pred ccccCChhHHHHHHHHHH
Q 037587 368 LLVSNTFEAEKELWKKII 385 (464)
Q Consensus 368 ~~~~~~~~~~~~l~~~ll 385 (464)
.+...++++.+.
T Consensus 342 ------~~~~~~f~~~l~ 353 (427)
T 3i16_A 342 ------KDKLIEFCKGIQ 353 (427)
T ss_dssp ------HHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHh
Confidence 133445666654
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.88 E-value=5.4e-21 Score=190.25 Aligned_cols=292 Identities=13% Similarity=0.129 Sum_probs=190.9
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHh-------cCCCCeEEEcCCCCCChhhhcc
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCL-------ADPGDAFLLPTPYYPGFDRDLK 151 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l-------~~~gd~Vlv~~p~y~~~~~~~~ 151 (464)
.|.+..+..++++++|++++ .+ ++++++++++++..++.++ +++||.|+++.|+|..+...+.
T Consensus 29 ~~~~~~~~~~l~~~la~~~~--------~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~ 98 (390)
T 3b8x_A 29 MFTMGEYVKQYETQFAKTFG--------SK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQ 98 (390)
T ss_dssp CCSSCHHHHHHHHHHHHHHT--------CS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHC--------CC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHH
Confidence 34455567899999999986 22 5677777778999999998 7899999999999999988887
Q ss_pred cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 152 WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 152 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.. |++++.++++++ .+.+|++.+++.+++ ++++|+++| ++|.. .++++|.++|+++|+++|+|++|
T Consensus 99 ~~-g~~~~~~~~~~~-~~~~d~~~l~~~i~~------~~~~v~~~~---~~g~~---~~~~~i~~l~~~~~~~li~D~a~ 164 (390)
T 3b8x_A 99 QY-GLRVKFVDIDIN-TLNIDIESLKEAVTD------STKAILTVN---LLGNP---NNFDEINKIIGGRDIILLEDNCE 164 (390)
T ss_dssp HT-TCEEEEECBCTT-TCSBCHHHHHHHCCT------TEEEEEEEC---GGGCC---CCHHHHHHHHTTSCCEEEEECTT
T ss_pred Hc-CCEEEEEecCcc-ccCcCHHHHHHHhCc------CCeEEEEEC---CccCh---hhHHHHHHHHHHcCCEEEEECcC
Confidence 76 999999998753 478999999998754 789998885 45554 45888999999999999999999
Q ss_pred cccccCCCCCCccchhhhhhccCcCCCCCCCCcEE-EEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccC-------
Q 037587 232 SGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIH-IVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFG------- 303 (464)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi-~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~------- 303 (464)
+....... .. + . ....+. +....+|.++ +| +.|+++++++.+.+.++......
T Consensus 165 ~~g~~~~~----~~---~-g---------~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~ 225 (390)
T 3b8x_A 165 SMGATFNN----KC---A-G---------TFGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPK 225 (390)
T ss_dssp CTTCEETT----EE---T-T---------SSSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCS
T ss_pred cccCEECC----cc---c-c---------cccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHHHHHhcCCCccccc
Confidence 83211111 01 1 0 001111 1123355554 34 34999987755554443322110
Q ss_pred --------------------------CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecC-
Q 037587 304 --------------------------LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKS- 355 (464)
Q Consensus 304 --------------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~- 355 (464)
.++.+...++...+ +++++..+..++.++++.+.|+++ |+.+..+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 298 (390)
T 3b8x_A 226 KNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQET 298 (390)
T ss_dssp EETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCC
T ss_pred cccccccccccccccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCC
Confidence 03334443333332 234566666777888889999886 7776543
Q ss_pred -CccE-EEEEecCcccccCChhHHHHHHHHHHHhcCeEEeC---CCCCCC-C---------C----------CCeEEEEe
Q 037587 356 -NAGL-FCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISP---GSSCHC-N---------E----------PGWFRICF 410 (464)
Q Consensus 356 -~~g~-f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~p---g~~f~~-~---------~----------~~~~Ris~ 410 (464)
.+++ .+++.++.... ....++...| .++||.+++ |+.+.. . . .+.+||++
T Consensus 299 ~~~~~~~~~i~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~ 373 (390)
T 3b8x_A 299 GESSWFGFSFIIKKDSG----VIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGN 373 (390)
T ss_dssp SBCCCCEEEEEECTTSC----CCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEEC
T ss_pred CCcccEEEEEEecCcCc----ccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeC
Confidence 2343 25556552100 0122455555 568999986 321111 0 0 13599999
Q ss_pred ec-CCHHHHHHHHHHH
Q 037587 411 AN-ITEETLQVALQRI 425 (464)
Q Consensus 411 ~~-~~~e~l~~~l~~l 425 (464)
+. .++++++.+++.|
T Consensus 374 ~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 374 HQIELFDEIDYLREVL 389 (390)
T ss_dssp CSSCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHhh
Confidence 87 7999999998876
No 217
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.88 E-value=2.3e-21 Score=197.82 Aligned_cols=320 Identities=11% Similarity=0.084 Sum_probs=215.6
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCC-----CCCcEEEeCChHHHHHHHHHHhcC-------------------CCC
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKF-----DPNKLVLTAGSTAANETLMFCLAD-------------------PGD 134 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~~i~it~G~~~al~~~~~~l~~-------------------~gd 134 (464)
.|....+..++++.+++++.+.+|.+... .....++|+|+++++..++.+... +++
T Consensus 104 ~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 104 TWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred CccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 46555567899999999999887732110 013689999999999888777521 346
Q ss_pred eEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHH
Q 037587 135 AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHL 214 (464)
Q Consensus 135 ~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i 214 (464)
.|+++.++|..+...+... |++++.+|+++ ++ +|+++|+++|++....+..+.+|+++.++|+||.+ +++++|
T Consensus 184 ~vi~s~~~H~s~~~~~~~~-g~~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~---~~l~~I 256 (475)
T 3k40_A 184 VGYCSDQAHSSVERAGLLG-GVKLRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF---DYLDEC 256 (475)
T ss_dssp EEEEETTSCHHHHHHHHHH-TCEEEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHH
T ss_pred EEEECCCchHHHHHHHHHc-CCceEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCc---CCHHHH
Confidence 8999999999888888776 99999999863 56 99999999998754444457888999999999998 458889
Q ss_pred HHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH-H
Q 037587 215 INFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV-V 293 (464)
Q Consensus 215 ~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-~ 293 (464)
+++|+++|+++++|++|+...+..+ .+.. ..... .....+..+++|.++ ....+|+++..++.. .
T Consensus 257 ~~la~~~~~~lhvD~A~~~~~~~~~--~~~~---~~~gi--------~~~Ds~~~~~hK~l~-~p~g~g~l~~~~~~~l~ 322 (475)
T 3k40_A 257 GPVGNKHNLWIHVDAAYAGSAFICP--EYRH---LMKGI--------ESADSFNFNPHKWML-VNFDCSAMWLKDPSWVV 322 (475)
T ss_dssp HHHHHHTTCEEEEECTTGGGGGGSG--GGGG---GGTTG--------GGCSEEEECHHHHSS-CCSSCEEEEESSGGGC-
T ss_pred HHHHHHhCCeEEEeHHhHHHHHhCH--hhHH---HhcCc--------ccCCEEEECchhccC-CCCceEEEEEeCHHHHH
Confidence 9999999999999999986433222 1111 11110 022456789999886 335578888765433 2
Q ss_pred HHHHHhcccC----------------CC----ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 037587 294 SAATKMSSFG----------------LV----SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRC 352 (464)
Q Consensus 294 ~~~~~~~~~~----------------~~----s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~ 352 (464)
+.+.....+. .. ..+.+.++...+. .+.+++..++..++.+++.+.|++. |+++
T Consensus 323 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l 397 (475)
T 3k40_A 323 NAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVADSRFEL 397 (475)
T ss_dssp --------------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSTTEEE
T ss_pred HHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 2221111110 00 1233333333332 3345667777888889999999987 8888
Q ss_pred ecCCccEEEEEecCcccccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec--CCHHHHHHHHHHHHHHHH
Q 037587 353 LKSNAGLFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN--ITEETLQVALQRIKVFAQ 430 (464)
Q Consensus 353 ~~~~~g~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~--~~~e~l~~~l~~l~~~l~ 430 (464)
..+.....+++.++.. .....++..++.++.++.+.|+..+ +..++|++++. .++++++.++++|+++++
T Consensus 398 ~~~~~~~iv~f~~~~~-----~~~~~~l~~~L~~~g~~~~~~~~~~---g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~ 469 (475)
T 3k40_A 398 AAEINMGLVCFRLKGS-----NERNEALLKRINGRGHIHLVPAKIK---DVYFLRMAICSRFTQSEDMEYSWKEVSAAAD 469 (475)
T ss_dssp SSCCBTTEEEEEESSC-----HHHHHHHHHHHHHHTSCBCEEEEET---TEEEEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred ecCCceEEEEEEeCCc-----hHHHHHHHHHHHhCCcEEEEeeEEC---CEEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 7544434677776531 1223467777776544455554433 35689999875 478999999999999887
Q ss_pred hh
Q 037587 431 SC 432 (464)
Q Consensus 431 ~~ 432 (464)
+.
T Consensus 470 ~~ 471 (475)
T 3k40_A 470 EM 471 (475)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 218
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.88 E-value=2.5e-21 Score=194.70 Aligned_cols=156 Identities=18% Similarity=0.162 Sum_probs=124.0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v 161 (464)
..+++++++++++ .+ +.|++ +++++++..++.+++++||.|+++.|+|+++...+ ... |++++.+
T Consensus 60 ~~~l~~~la~~~g--------~~-~~v~~-~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 128 (421)
T 2ctz_A 60 VDVLEKRLAALEG--------GK-AALAT-ASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRL-GIEVRFT 128 (421)
T ss_dssp HHHHHHHHHHHHT--------CS-EEEEE-SSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHT-TCEEEEC
T ss_pred HHHHHHHHHHHhC--------CC-ceEEe-cCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHc-CCEEEEE
Confidence 4788899998885 22 34544 45599999999999999999999999998776654 445 9999888
Q ss_pred -ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc-cccccCCC
Q 037587 162 -HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY-SGTVFDSP 239 (464)
Q Consensus 162 -~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay-~~~~~~~~ 239 (464)
+.+ |++++++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++| +. .+...
T Consensus 129 ~~~~-------d~~~l~~~i~~------~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~-g~~~~ 191 (421)
T 2ctz_A 129 SREE-------RPEEFLALTDE------KTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMG-GYLLR 191 (421)
T ss_dssp CTTC-------CHHHHHHHCCT------TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGG-GTSCC
T ss_pred CCCC-------CHHHHHHhhcc------CCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcccc-cccCC
Confidence 643 78899888754 8899999999999999988 788899999999999999999 52 23222
Q ss_pred CCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEec
Q 037587 240 SSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSN 288 (464)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~ 288 (464)
.+ .. +..+++.|+||.+|.+|.|+|++++.
T Consensus 192 -----~~-~~-------------~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 192 -----PL-AW-------------GAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp -----GG-GG-------------TCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred -----cc-cc-------------CCeEEEECCcccccCCCCcEEEEEEe
Confidence 11 11 34578899999999889999988874
No 219
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.88 E-value=5.6e-21 Score=190.41 Aligned_cols=251 Identities=16% Similarity=0.108 Sum_probs=175.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChhh------
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL---TAGSTAANETLMFCLADPGDAFLLPT-PYYPGFDR------ 148 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~------ 148 (464)
.|++. |..+|++.+|++++ . +..++ ++|+++++..++.+++++||.|+++. |.|..+..
T Consensus 55 ~y~~~-~~~~Le~~lA~l~g--------~--e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g 123 (409)
T 3jzl_A 55 GYDDE-GRDTLERVYATVFK--------T--EAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRK 123 (409)
T ss_dssp CTTCH-HHHHHHHHHHHHHT--------C--SEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSS
T ss_pred CCChh-HHHHHHHHHHHHhC--------C--CcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhccc
Confidence 45443 46778888888875 2 33445 88999999999999999999999998 99998874
Q ss_pred ----hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC----CCCCCCCCCCHHHHHHHHHHHhh
Q 037587 149 ----DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN----PSNPLGTAMTHQELNHLINFSKS 220 (464)
Q Consensus 149 ----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~----P~NPtG~~~s~~~l~~i~~~~~~ 220 (464)
.++.. |++++.+++++ ++.+|++++++++++ ++++|++++ |+||||.+ .++++|+++|++
T Consensus 124 ~~~~~l~~~-G~~~~~v~~~~--~g~~d~e~l~~ai~~------~tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~ 191 (409)
T 3jzl_A 124 QGQGSLKDF-HIGYSSVPLLE--NGDVDFPRIAKKMTP------KTKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKN 191 (409)
T ss_dssp SSSSCTGGG-TCEEEECCCCT--TSCCCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHH
T ss_pred chhhHHHHc-CCEEEEeCCCC--CCCcCHHHHHHhccC------CCeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHh
Confidence 34445 99999998864 567899999998754 789999999 99999987 689999999999
Q ss_pred --CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHH
Q 037587 221 --KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAAT 297 (464)
Q Consensus 221 --~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~ 297 (464)
+|+++|+|++|+.+.+... + . .. +..++++|+||.+|.+| .+.||++++ +.+.+.+.
T Consensus 192 ~~~~~~livD~a~~~~~~~~~--p-~---~~-------------g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~ 251 (409)
T 3jzl_A 192 INPEVIVFVDNCYGEFVEYQE--P-P---EV-------------GADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCG 251 (409)
T ss_dssp HCTTCEEEEECTTCTTTSSCC--S-G---GG-------------TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHH
T ss_pred hCCCCEEEEeCCcccccccCC--c-c---cc-------------CCeEEEECccccCCccCCceEEEEEeC-HHHHHHHH
Confidence 9999999999987543322 1 1 11 34588999999998555 446999995 55555444
Q ss_pred Hh-cc--c--CCCChHH-HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc----cEEEEEecCc
Q 037587 298 KM-SS--F--GLVSSQT-QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNA----GLFCWVDMRH 367 (464)
Q Consensus 298 ~~-~~--~--~~~s~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----g~f~~~~l~~ 367 (464)
.. .. . ...+.+. +.++...+ +....++++..++...+.+.|+++|+++.|... ...+.+.+..
T Consensus 252 ~~~~~~~~g~~~g~~~~~~~~~l~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~v~p~~~~~~~~~i~~i~l~~ 324 (409)
T 3jzl_A 252 YRLTTPGIGREAGASLYSLLEMYQGF-------FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHN 324 (409)
T ss_dssp HHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSCCEEECSC
T ss_pred HHhccccccccccccHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCccEEEEEEeCC
Confidence 32 21 1 0111111 22222222 224455667778889999999999998866432 2245555542
Q ss_pred ccccCChhHHHHHHHHHH
Q 037587 368 LLVSNTFEAEKELWKKII 385 (464)
Q Consensus 368 ~~~~~~~~~~~~l~~~ll 385 (464)
.+...++++.|.
T Consensus 325 ------~~~~~~~~~~L~ 336 (409)
T 3jzl_A 325 ------KEKMVAFAQAIQ 336 (409)
T ss_dssp ------HHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHH
Confidence 133445666664
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.88 E-value=1.9e-21 Score=194.41 Aligned_cols=252 Identities=15% Similarity=0.114 Sum_probs=174.4
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHcCCCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChh-------
Q 037587 79 LFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVL---TAGSTAANETLMFCLADPGDAFLLPT-PYYPGFD------- 147 (464)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~------- 147 (464)
.|++. |..+|++.+|++++ .+..++ ++|+++++..++.++++|||+|++++ |.|..+.
T Consensus 70 ~Y~~~-g~~~Le~~lA~l~g----------~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 70 GYNDI-GRDSLDRVYANIFN----------TESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp CTTCH-HHHHHHHHHHHHHT----------CSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCch-hHHHHHHHHHHHhC----------CCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhcccc
Confidence 35444 56788888888875 233455 78889999999999999999999999 9998775
Q ss_pred ----hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeC----CCCCCCCCCCHHHHHHHHHHHh
Q 037587 148 ----RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITN----PSNPLGTAMTHQELNHLINFSK 219 (464)
Q Consensus 148 ----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~----P~NPtG~~~s~~~l~~i~~~~~ 219 (464)
..++.. |++++.++. +++.+|++++++++++ .+++++|++++ |+||||.+ .++++|+++|+
T Consensus 139 ~~~~~~l~~~-G~~~~~v~~---~~~~~d~e~l~~~i~~----~~~tklV~i~~s~gyp~nptg~v---~dl~~i~~ia~ 207 (427)
T 3hvy_A 139 SKKVGSLREY-GVKYKMVDL---KDGKVDINTVKEELKK----DDSIKLIHIQRSTGYGWRKSLRI---AEIAEIIKSIR 207 (427)
T ss_dssp TCCSCCTGGG-TCEEEECCC---BTTBCCHHHHHHHHHH----CTTEEEEEEESSCCSSSSCCCCH---HHHHHHHHHHH
T ss_pred chhhhHHHHc-CCEEEEecC---CCCCcCHHHHHHHhhC----CCCCEEEEEECCCCCCCCccccH---HHHHHHHHHHH
Confidence 334445 999999887 2567899999999873 12899999999 99999876 78999999999
Q ss_pred h--CCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHH
Q 037587 220 S--KRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAA 296 (464)
Q Consensus 220 ~--~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~ 296 (464)
+ +|+++|+|++|+.+.+... + . .. +..++++|+||.+|.+| .+.||++++ +.+.+.+
T Consensus 208 ~~~~g~~livD~a~~~~~~~~~--p-~---~~-------------gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l 267 (427)
T 3hvy_A 208 EVNENVIVFVDNCYGEFVEEKE--P-T---DV-------------GADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQA 267 (427)
T ss_dssp HHCSSSEEEEECTTCTTTSSSC--G-G---GG-------------TCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHH
T ss_pred HhCCCCEEEEECCccccccCCC--C-c---cc-------------CCeEEEECCcccccccccceEEEEEEC-HHHHHHH
Confidence 9 8999999999986543322 1 1 11 34588999999998444 556999985 5555555
Q ss_pred HHhc-ccC---CCCh-HH-HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCcc----EEEEEecC
Q 037587 297 TKMS-SFG---LVSS-QT-QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAG----LFCWVDMR 366 (464)
Q Consensus 297 ~~~~-~~~---~~s~-~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g----~f~~~~l~ 366 (464)
+... ... ..++ +. ..++...+ +....++++..++...+.+.|+++|+++.|..+. ..+.+.+.
T Consensus 268 ~~~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~g~~V~p~~~~~~~~li~~~~l~ 340 (427)
T 3hvy_A 268 TFRVTVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELAGFDVLPKYNDKRTDIIQAIKFN 340 (427)
T ss_dssp HHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHTTCEEESCTTSCCSSSEEEEECS
T ss_pred HHHhhcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCCceEEEEEeCC
Confidence 4422 111 0111 21 22222211 1234566677788889999999999988765332 25566664
Q ss_pred cccccCChhHHHHHHHHHH
Q 037587 367 HLLVSNTFEAEKELWKKII 385 (464)
Q Consensus 367 ~~~~~~~~~~~~~l~~~ll 385 (464)
. .+...++++.+.
T Consensus 341 ~------~~~~~~f~~~l~ 353 (427)
T 3hvy_A 341 D------EKKLIDFIKGIQ 353 (427)
T ss_dssp S------HHHHHHHHHHHH
T ss_pred C------HHHHHHHHHHhc
Confidence 2 133345666553
No 221
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.80 E-value=2.5e-24 Score=217.47 Aligned_cols=339 Identities=9% Similarity=0.012 Sum_probs=207.0
Q ss_pred CCCCCCCCceEEeeccccc--c--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcCCC
Q 037587 29 YDQLHNPSGIIQMGLAENQ--L--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNK 104 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~~n~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~ 104 (464)
|..+.+...+|||..+..+ + .+|.+.+++.+.... .....|+. ....+|.+.|++++.
T Consensus 93 ~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~-----------~~~~~~~~-~~~~~Lae~L~~~~p------ 154 (465)
T 2yky_A 93 RFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAV-----------GLNLSTQT-ENEALFAEAVCDRFP------ 154 (465)
Confidence 4444456678999887553 3 346666666654211 11123432 234677777777652
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcc---cCCCc--EEEEEecCCCCCcccCHHHHH
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLK---WRPGV--EIVPIHCSSSNGFRITISALE 177 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~---~~~g~--~~~~v~~~~~~~~~~d~~~l~ 177 (464)
..+.+++++++++++..+++.+. ..++.|++.+++|+++...+. ...|+ .++.++. .|++.|+
T Consensus 155 ---~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~ 224 (465)
T 2yky_A 155 ---SIDLVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTA 224 (465)
Confidence 34689999999999999998752 345899999999987654332 01133 2233321 2678888
Q ss_pred HHHHHHhhcCCceEEEEEeCCCCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcC
Q 037587 178 NAYQQAQTLNLKVKGVLITNPSNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNID 256 (464)
Q Consensus 178 ~~i~~~~~~~~~~~~vil~~P~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~ 256 (464)
+.+++. +.++++|++...+++||.+. +.+.+++|.++|+++|+++|+||+|. +..+ . .... +.
T Consensus 225 ~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~---~~a~-~~------- 288 (465)
T 2yky_A 225 DLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-G---GGAQ-EM------- 288 (465)
Confidence 888631 13677766643356699655 57889999999999999999999998 5221 1 1111 11
Q ss_pred CCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH-------hcccCCCChHHHHHHHHHcCCchhhHHHHHH
Q 037587 257 ESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK-------MSSFGLVSSQTQYLLSRMLSDKKFTCNYMKE 329 (464)
Q Consensus 257 ~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~-------~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 329 (464)
.+....+.||||.+| .|+|+||++++++ +.+.+.. ....+..++++++++.+.|+.-.- +.
T Consensus 289 -----~gv~pDi~t~sK~lg-~G~piG~v~~~~~-i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~-----~~ 356 (465)
T 2yky_A 289 -----LGISADLTTLGKYIG-GGMSFGAFGGRRD-LMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT-----RQ 356 (465)
Confidence 122233559999999 5999999999654 4443433 112234677888877766653210 11
Q ss_pred HHHHHHHHHHHHHHHHHh----CCCeeecCCccEEEEEecCc-cccc------CChhHHHHHHHHHHHhcCeEEeCCCCC
Q 037587 330 NRKRLRKRKEMLVSGLKV----AGIRCLKSNAGLFCWVDMRH-LLVS------NTFEAEKELWKKIIFEVGLNISPGSSC 398 (464)
Q Consensus 330 ~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g~f~~~~l~~-~~~~------~~~~~~~~l~~~ll~~~gI~v~pg~~f 398 (464)
..+.++++.+++.+.|++ +++.......|.++|+.++. .... .+.....+++..++ ++||++.|+. |
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~ 434 (465)
T 2yky_A 357 AASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-M 434 (465)
Confidence 223333333444444433 34333333456788888864 1100 00111235677776 6799999875 3
Q ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhC
Q 037587 399 HCNEPGWFRICFANITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 399 ~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~ 433 (464)
. . +++. .+++++++++++|++++++.+
T Consensus 435 ~----~---~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 435 Y----A---LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 2 1 5654 589999999999999987654
No 222
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.87 E-value=2.4e-21 Score=195.92 Aligned_cols=286 Identities=14% Similarity=0.127 Sum_probs=179.8
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChH---HHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGST---AANETLMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVE 157 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~---~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~ 157 (464)
|..++.+.+.+.+.+.+| ++++++++++|++ +++.+++ ..++||+|+++.|+|+.+...++ .. |++
T Consensus 105 g~~~~~~~~~~~la~~~g----~~~~~i~~~~g~taa~ea~~~a~--~~~~gd~Viv~~~~h~s~~~~~~~~a~~~-G~~ 177 (438)
T 1wyu_A 105 GVLQATFEYQTMIAELAG----LEIANASMYDGATALAEGVLLAL--RETGRMGVLVSQGVHPEYRAVLRAYLEAV-GAK 177 (438)
T ss_dssp HHHHHHHHHHHHHHHHHT----SSEECSCBSSHHHHHHHHHHHHH--HHHTCCEEEEETTSCHHHHHHHHHHHHHT-TCE
T ss_pred hHHHHHHHHHHHHHHHhC----CCccceEEeCcHHHHHHHHHHHH--hcCCCCEEEEcCccCHhHHHHHHHHHHHC-CCE
Confidence 434444444444444434 5677899999999 5554443 24689999999999988875543 35 999
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc-cccccc
Q 037587 158 IVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI-YSGTVF 236 (464)
Q Consensus 158 ~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea-y~~~~~ 236 (464)
++.++.+ ++.+|+++ +. +++++|++++| ||||.+.+ +++|+++|+++|+++|+|.. .+ +
T Consensus 178 v~~v~~~---~~~~d~~~----i~------~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a---~ 237 (438)
T 1wyu_A 178 LLTLPLE---GGRTPLPE----VG------EEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLS---L 237 (438)
T ss_dssp EEEECCB---TTBCCCCC----CC------TTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTG---G
T ss_pred EEEEcCc---CCccCHHH----hC------CCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhh---c
Confidence 9999862 34677666 32 37899999999 99999974 77788899999999996622 21 2
Q ss_pred CCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCC----CCCccEEEEEEecCHHHHHHH----------------
Q 037587 237 DSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDF----SMPGFRVGMIYSNNERVVSAA---------------- 296 (464)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~----g~~GlRiG~l~~~~~~~~~~~---------------- 296 (464)
+.. . ....+ +..+++.| +|.| ++.|.|+||++++++ +.+.+
T Consensus 238 g~~--~--~~~~~-------------g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~ 298 (438)
T 1wyu_A 238 GVL--K--PPGAY-------------GADIAVGD-GQSLGLPMGFGGPHFGFLATKKA-FVRQLPGRLVSETVDVEGRRG 298 (438)
T ss_dssp GTB--C--CHHHH-------------TCSEEEEE-CTTTTCCCGGGCSCCEEEEECGG-GGGGCCSCCEEEEEBTTSCEE
T ss_pred cCc--C--CCccC-------------CCCEEEEC-CcccCCCccCCCCCeeEEEEcHH-HHHhCCCceeccccccCCCcc
Confidence 211 1 11112 22244545 5544 456779999998654 32221
Q ss_pred ------------HHhcccCCC---ChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCccEE
Q 037587 297 ------------TKMSSFGLV---SSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVA-GIRCLKSNAGLF 360 (464)
Q Consensus 297 ------------~~~~~~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~g~f 360 (464)
+......++ +.....++...+.... .+.+++..+.+.++++++.+.|++. |+++..+. ++|
T Consensus 299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~--~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~ 375 (438)
T 1wyu_A 299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALG--PEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFF 375 (438)
T ss_dssp EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBC
T ss_pred eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeE
Confidence 101111112 2222221111122111 2336677778888999999999998 89887654 334
Q ss_pred EEEecCcccccCChhHHHHHHHHHHHhcCeEE--eCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHH
Q 037587 361 CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNI--SPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFA 429 (464)
Q Consensus 361 ~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~v--~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l 429 (464)
.++.+.... ...+++..|. ++||.+ .++..|. ++++||+++. .+++++++++++|++++
T Consensus 376 ~~~~~~~~~------~~~~~~~~L~-~~gi~v~~~~~~~~~---~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 376 NEFALALPK------DPEAVRRALA-ERGFHGATPVPREYG---ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp SEEEEECSS------CHHHHHHHHH-HTTCCCCEECCTTSC---SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCC------CHHHHHHHHH-HCCceeccccccccC---CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 333332110 1235777776 569999 7777664 6799999986 58999999999998764
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.87 E-value=3.2e-21 Score=204.29 Aligned_cols=312 Identities=13% Similarity=0.041 Sum_probs=193.1
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh-cccCCCcEEEEEec
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD-LKWRPGVEIVPIHC 163 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~~g~~~~~v~~ 163 (464)
-..++++.+|++++ .+ ..+++++|+++++..++.+++++||.|+++.|+|..+... +... |++++.++.
T Consensus 174 ~i~e~e~~lA~~~g--------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~-Ga~~v~v~~ 243 (730)
T 1c4k_A 174 PAVAAEKHAARVYN--------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMA-GGRPVYLQT 243 (730)
T ss_dssp HHHHHHHHHHHHTT--------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTT-CCEEEEECE
T ss_pred HHHHHHHHHHHHHC--------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHC-CCEEEEEeC
Confidence 35788899998876 33 4588999999999999999999999999999999888777 6655 999988876
Q ss_pred CCCCCcc----cCHHHH-----HHHHHHH-hh--cCCce-EEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 164 SSSNGFR----ITISAL-----ENAYQQA-QT--LNLKV-KGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 164 ~~~~~~~----~d~~~l-----~~~i~~~-~~--~~~~~-~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
..+ .|. +|++.| ++++++. .. ...++ +++++++| ||+|.+.+ +++|+++|+++++++|+||+
T Consensus 244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECT
T ss_pred Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcc
Confidence 432 333 688888 6665431 00 01112 88999999 69999975 77889999999999999999
Q ss_pred cccc-ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEE-EEEEecCHHH--------HHHHHHh-
Q 037587 231 YSGT-VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRV-GMIYSNNERV--------VSAATKM- 299 (464)
Q Consensus 231 y~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRi-G~l~~~~~~~--------~~~~~~~- 299 (464)
|+.. .|.+.. +..+.... ... +.+.++++++.|+||++ +|++. |+++.+++.+ ...++..
T Consensus 319 h~~~~~f~~~~-~g~~~l~~-~~~-----g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~ 389 (730)
T 1c4k_A 319 WVGYEQFIPMM-RNSSPLLI-DDL-----GPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSF 389 (730)
T ss_dssp TCCGGGSSGGG-GGGCTTSC-CCC-----CTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHH
T ss_pred cccccccCccc-CCcCcccc-ccc-----CCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHH
Confidence 9743 233210 00011111 000 00235789999999986 55554 5564433321 1112211
Q ss_pred ccc--CCCChHHHHHHHH---HcCCchhhHHHHHHHHHHHHHHHHHHHHHHHh--CCCeeecCC----------------
Q 037587 300 SSF--GLVSSQTQYLLSR---MLSDKKFTCNYMKENRKRLRKRKEMLVSGLKV--AGIRCLKSN---------------- 356 (464)
Q Consensus 300 ~~~--~~~s~~~q~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~~~~~~~---------------- 356 (464)
..+ .+++....+++.. .+... ...+..+++.+....+++.|.+ .|+++..+.
T Consensus 390 ~~~~stsp~~~~iaal~aA~~~l~~~-----~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~ 464 (730)
T 1c4k_A 390 NLFMSTSPFYPMYAALDVNAAMQEGE-----AGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMA 464 (730)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHSHH-----HHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHT
T ss_pred HHhCCCCCcHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccccccccccccccccc
Confidence 111 2233333333322 23221 1233344555666667777777 377665432
Q ss_pred ---------------------cc-EE-----EEEecCcc------cccCChhHHHHHHHHHHHhcCeEEeCCCCCCCCCC
Q 037587 357 ---------------------AG-LF-----CWVDMRHL------LVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEP 403 (464)
Q Consensus 357 ---------------------~g-~f-----~~~~l~~~------~~~~~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~ 403 (464)
.+ ++ +.+.+|.. ..... ....++...| +++||.+... +.
T Consensus 465 ~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g-~~~~~l~~~L-~e~GI~v~~~------~~ 536 (730)
T 1c4k_A 465 NNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFG-VPATIVANYL-RDHGIIPEKS------DL 536 (730)
T ss_dssp TCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSC-CCHHHHHHHH-HHTTCCCSEE------CS
T ss_pred ccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccC-CCHHHHHHHH-HHCCcEEEEC------CC
Confidence 11 12 45555421 00111 1122455555 5679988653 24
Q ss_pred CeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 404 GWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 404 ~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+.+|++++. .++++++.++++|.++.+.+.
T Consensus 537 ~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 537 NSILFLMTPAETPAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp SEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 679999876 789999999999999987664
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.86 E-value=1.1e-20 Score=189.81 Aligned_cols=254 Identities=17% Similarity=0.136 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChhhhc----------ccCCCc
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPT-PYYPGFDRDL----------KWRPGV 156 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~~----------~~~~g~ 156 (464)
..++++.+.+.+.+|. .....+++++ ++++++..++.+++++||.|+++. |+|..+...+ +.. |+
T Consensus 65 ~~~~~l~~~la~~~g~--~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~-G~ 140 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGA--EAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEY-NI 140 (431)
T ss_dssp HHHHHHHHHHHHHTTC--SEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGG-TC
T ss_pred hhHHHHHHHHHHHhCC--Ccccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHc-CC
Confidence 3456666666555441 1112233355 668999999999999999999998 9999887544 334 99
Q ss_pred EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe-CCCCCCCCCCCHHHHHHHHHHHhh--CCeEEEEeccccc
Q 037587 157 EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT-NPSNPLGTAMTHQELNHLINFSKS--KRIHIVSDEIYSG 233 (464)
Q Consensus 157 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~-~P~NPtG~~~s~~~l~~i~~~~~~--~~~~lI~Deay~~ 233 (464)
+++.++.++ ++.+|++++++++++ ++++|+++ +||||+|..++.+++++|+++|++ +|+++|+||+|+.
T Consensus 141 ~~~~v~~~~--~~~~d~e~l~~~l~~------~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~ 212 (431)
T 3ht4_A 141 GYNAVPLTE--GGLVDFEAVAAAIHS------NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGE 212 (431)
T ss_dssp EEEECCBCT--TSSBCHHHHHHHCCT------TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred EEEEeCCCC--CCCcCHHHHHhhcCC------CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChh
Confidence 999999864 478999999998864 89999998 589999999999999999999999 9999999999997
Q ss_pred cccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCC-CccEEEEEEecCHHHHHHHHHh-ccc--C-CC-Ch
Q 037587 234 TVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSM-PGFRVGMIYSNNERVVSAATKM-SSF--G-LV-SS 307 (464)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~-~GlRiG~l~~~~~~~~~~~~~~-~~~--~-~~-s~ 307 (464)
+.+... + . .+ +..++++|+||.+|. .+...||++++ +.+.+.+... ... . .. ++
T Consensus 213 ~~~~~~--~-~---~~-------------g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~ 272 (431)
T 3ht4_A 213 FIEEQE--P-C---HV-------------GADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGAS 272 (431)
T ss_dssp TSSSCC--G-G---GT-------------TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCC
T ss_pred hccCCC--c-c---cc-------------CCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCcc
Confidence 654322 1 1 11 334889999999652 11333999995 4555544432 221 1 01 11
Q ss_pred HH-HHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCc----cEEEEEecCcccccCChhHHHHHHH
Q 037587 308 QT-QYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNA----GLFCWVDMRHLLVSNTFEAEKELWK 382 (464)
Q Consensus 308 ~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----g~f~~~~l~~~~~~~~~~~~~~l~~ 382 (464)
+. ..++...+ +....+.++..++...+.+.|+++|+++.|... +..+.+.++. .....++++
T Consensus 273 ~~~~~~~~~~l-------~~~~~~~~~~~~~a~~l~~~L~~~g~~v~p~~~~~~~~li~~i~l~~------~~~~~~~~~ 339 (431)
T 3ht4_A 273 LYSLQEMYQGF-------FLAPHVAGQALKGAIFTAAFLEKLGMNTSPAWNAPRTDLIQSVQFDD------KDRMIAFCQ 339 (431)
T ss_dssp CSCSHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHTCCEESCTTSCCSSSCCEEECCC------HHHHHHHHH
T ss_pred HHHHHHHHhHh-------hhHHHHHHHHHHHHHHHHHHHHhCcCEecCCCCCCCccEEEEEEeCC------HHHHHHHHH
Confidence 11 12222211 123445566777888899999999888765422 2355566652 123345666
Q ss_pred HHHH
Q 037587 383 KIIF 386 (464)
Q Consensus 383 ~ll~ 386 (464)
.+..
T Consensus 340 ~l~~ 343 (431)
T 3ht4_A 340 AIQY 343 (431)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6643
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=3.5e-20 Score=198.04 Aligned_cols=178 Identities=14% Similarity=0.156 Sum_probs=129.6
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCC
Q 037587 86 FPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSS 165 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~ 165 (464)
..++++.++++++ . .+.+++++|+++++..++.+++++||.|+++.|+|.++...+... |++++.++.+.
T Consensus 207 v~~~ee~la~l~G--------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~-G~~~v~v~~~~ 276 (755)
T 2vyc_A 207 FGESEKYAARVFG--------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLT-GAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHHHHT--------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHH-CCEEEEECCCB
T ss_pred HHHHHHHHHHHhC--------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHc-CCEEEEEeCCC
Confidence 4567777777765 2 346889999999999999999999999999999999888877766 99999998753
Q ss_pred CCCcc----c-----CHHHHHHHHHHHh----hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 166 SNGFR----I-----TISALENAYQQAQ----TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 166 ~~~~~----~-----d~~~l~~~i~~~~----~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
+ .|. + |++.+++++++.. +.+.++++++++|| ||+|.+.+ +++|+++|+++++++++||+|+
T Consensus 277 ~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~ 351 (755)
T 2vyc_A 277 N-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_dssp C-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTC
T ss_pred C-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCc
Confidence 2 333 4 8999999997521 12334568999999 79999975 7778999999999999999997
Q ss_pred cc-ccCCCCCCccchhhhh--hccCcCCCCCCCCcEEEEcCCCcCCCCCccE-EEEEEecC
Q 037587 233 GT-VFDSPSSSFISIMEAV--MDRNIDESDDLWSRIHIVYSLSKDFSMPGFR-VGMIYSNN 289 (464)
Q Consensus 233 ~~-~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlR-iG~l~~~~ 289 (464)
.. .|.....+...+ .. .+. ..++++++.|+||++ +|++ .|++++++
T Consensus 352 ~~~~~~~~~~~~~~~--~g~~aD~-------~~~~~iv~~S~hK~L--~g~~~g~~i~~~~ 401 (755)
T 2vyc_A 352 GYARFNPIYADHYAM--RGEPGDH-------NGPTVFATHSTHKLL--NALSQASYIHVRE 401 (755)
T ss_dssp TTGGGCGGGTTSSSS--CSCCCCC-------SSBEEEEEEETTTSS--SCCTTCEEEEEEC
T ss_pred hhcccCcccCCcchh--cCCcCCc-------cCCCeEEEECccccc--cCcCCeeeeeecC
Confidence 53 232110000111 11 111 236788999999986 5655 56776644
No 226
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.77 E-value=4.6e-18 Score=178.76 Aligned_cols=176 Identities=14% Similarity=0.160 Sum_probs=125.6
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
-..++++.+|++++ ....+++++|++.++..++.+++++||.|+++.++|.++...+... |++++.++.+
T Consensus 196 ~i~eaE~~lA~~fG---------a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~ls-Ga~pv~v~~~ 265 (715)
T 3n75_A 196 PHKEAEQYIARVFN---------ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMS-DVTPIYFRPT 265 (715)
T ss_dssp HHHHHHHHHHHHHT---------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHS-CCEEEEECCC
T ss_pred HHHHHHHHHHHHhC---------CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHc-CCEEEEEecc
Confidence 35789999999986 3456788999999999999999999999999999999998888776 9999999876
Q ss_pred CCCCccc---------CHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc
Q 037587 165 SSNGFRI---------TISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV 235 (464)
Q Consensus 165 ~~~~~~~---------d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~ 235 (464)
. +.|.+ |++.+++++++... ..+++++++++| ||+|.+++. ++|.++|+++ .+++||+|+...
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl---~~I~ela~~~--~livDEAH~~~~ 337 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVK--SIHFDSAWVPYT 337 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECH---HHHHHHCCCS--EEEEECTTCTTG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCH---HHHHHHhCcC--cEEEcccccccc
Confidence 4 34554 89999999975210 112348999999 999999874 5566667655 378999998642
Q ss_pred -cCCCCCCccchhhhhhccCcCCCCCCCCcE-EEEcCCCcCCCCCcc-EEEEEEecCH
Q 037587 236 -FDSPSSSFISIMEAVMDRNIDESDDLWSRI-HIVYSLSKDFSMPGF-RVGMIYSNNE 290 (464)
Q Consensus 236 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v-i~l~S~SK~~g~~Gl-RiG~l~~~~~ 290 (464)
|.+. +.....+... ...+.+ +++.|+||+++ |+ ..|+++++++
T Consensus 338 ~f~~~---~~~~~al~~g-------~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~ 383 (715)
T 3n75_A 338 NFSPI---YEGKCGMSGG-------RVEGKVIYETQSTHKLLA--AFSQASMIHVKGD 383 (715)
T ss_dssp GGSGG---GTTSSTTSSS-------CCTTCEEEEEECHHHHSS--CCTTCEEEEEESC
T ss_pred ccCCc---cccccccccC-------cCCCEEEEEEeccccccc--CCCCeeEEEeCch
Confidence 3221 1111111000 012343 66899999974 43 3588877544
No 227
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.73 E-value=1.8e-17 Score=162.73 Aligned_cols=288 Identities=14% Similarity=0.092 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCC-CcEEE-eCChHHHHHHHHHHhcCC--CCeEEEcCCCCCCh--hhhcccCCCcEEEE
Q 037587 87 PDAKKELVKLMARIRGNKVKFDP-NKLVL-TAGSTAANETLMFCLADP--GDAFLLPTPYYPGF--DRDLKWRPGVEIVP 160 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~-~~i~i-t~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~ 160 (464)
.+.|+.++++++ +++ .+|++ |.|+|+++++++..++.+ ||+|++...++.+. ...++.. |..++.
T Consensus 61 ~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~-G~~~~~ 131 (377)
T 3e77_A 61 NNTENLVRELLA--------VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKF-GTINIV 131 (377)
T ss_dssp HHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTT-SEEEEC
T ss_pred HHHHHHHHHHhC--------CCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHh-CCceEE
Confidence 456777777775 443 57888 589999999999999865 89988766554322 2234444 887777
Q ss_pred EecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCC
Q 037587 161 IHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS 240 (464)
Q Consensus 161 v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~ 240 (464)
++.+. ++..+++.++..+ .+++++|.+++-.|.||.+.|. +|+++|+++++|.+.+ ++..
T Consensus 132 ~~~~~--~~~~~~~~~~~~i------~~~t~lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~---~g~~- 191 (377)
T 3e77_A 132 HPKLG--SYTKIPDPSTWNL------NPDASYVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSN---FLSK- 191 (377)
T ss_dssp SCCCS--SSCSCCCGGGCCC------CTTCSCEEEESEETTTTEECSS--------CCCCTTCCEEEECTTT---TTSS-
T ss_pred eccCC--CcCCCCChHHhcc------CCCccEEEEeCccCchheEchh--------hhccCCCEEEEEcccc---cCCC-
Confidence 77643 3345556554433 2478889998888999999885 3678899999999997 4433
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHH-------------HHHHHHhcccCCCCh
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERV-------------VSAATKMSSFGLVSS 307 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~-------------~~~~~~~~~~~~~s~ 307 (464)
+ .++..+ + +++.|..|.+|.+| +|+++.+++.+ ....+....+++++.
T Consensus 192 -~-id~~~~-------------~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v 252 (377)
T 3e77_A 192 -P-VDVSKF-------------G--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPC 252 (377)
T ss_dssp -C-CCGGGC-------------S--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCH
T ss_pred -C-Cchhhc-------------C--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchH
Confidence 1 232211 3 36689999999888 57776644321 001111122345555
Q ss_pred HHHHHHHHHcCCchhhHH--HHHHHHHHHHHHHHHHHHHHHhC-CCeeecC----CccEEEEEecCcccccCChhHHHHH
Q 037587 308 QTQYLLSRMLSDKKFTCN--YMKENRKRLRKRKEMLVSGLKVA-GIRCLKS----NAGLFCWVDMRHLLVSNTFEAEKEL 380 (464)
Q Consensus 308 ~~q~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~----~~g~f~~~~l~~~~~~~~~~~~~~l 380 (464)
....++..+++. +.+ -++...++.++..+++.+.|++. |+.+.+. .++..+.+.++..-... +-+..+
T Consensus 253 ~~i~~l~~al~~---l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~--~~~~~~ 327 (377)
T 3e77_A 253 FSIYVMGLVLEW---IKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDD--ALEKRF 327 (377)
T ss_dssp HHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCH--HHHHHH
T ss_pred HHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCch--hHHHHH
Confidence 555555555442 122 25667777888889999999987 7764431 23344566666311100 111235
Q ss_pred HHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 381 WKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 381 ~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
...+ .++||.+++|.. ..+.+|+|+.. .++++++.+++.|+++++++
T Consensus 328 l~~l-~~~Gi~~~~g~~----~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 328 LDKA-LELNMLSLKGHR----SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp HHHH-HHTTEESCBCCT----TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHCCcEEeCCCC----cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 5555 467999998863 24569999987 78999999999999998875
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.72 E-value=3.1e-16 Score=153.37 Aligned_cols=283 Identities=13% Similarity=0.173 Sum_probs=181.1
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCC-CCcEEE-eCChHHHHHHHHHHhcCCCCeEEEcCC-CCCC-hhhhcccCCCcEEEEE
Q 037587 86 FPDAKKELVKLMARIRGNKVKFD-PNKLVL-TAGSTAANETLMFCLADPGDAFLLPTP-YYPG-FDRDLKWRPGVEIVPI 161 (464)
Q Consensus 86 ~~~lr~~ia~~~~~~~~~~~~~~-~~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~-~~~~~~~~~g~~~~~v 161 (464)
..+.|+.++++++ ++ +.+|++ |+|+|+++++++..++ +||++++... .|.. ....++.. |+++..+
T Consensus 52 ~~~~r~~la~ll~--------~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~-G~~v~~~ 121 (361)
T 3m5u_A 52 HFGAQEKAKKLYE--------LNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQIL-GVNVKTV 121 (361)
T ss_dssp HHHHHHHHHHHHT--------CCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHT-TCCEEEE
T ss_pred HHHHHHHHHHHhC--------CCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHc-CCceEEE
Confidence 3456677777775 44 457887 9999999999999998 8886532222 2321 22234445 8999999
Q ss_pred ecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 162 HCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
+.+..+.+.++++. + ++ +++++|.+++..|.||..++. +++ +|+++++|.+.+ ++..
T Consensus 122 ~~~~~g~~~~~~~~-~--l~------~~t~lv~~~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~---~g~~-- 178 (361)
T 3m5u_A 122 ASSEESNFDHIPRV-E--FS------DNADYAYICSNNTIYGTQYQN--------YPK-TKTPLIVDASSD---FFSR-- 178 (361)
T ss_dssp EECTTTTSCSCCCC-C--CC------TTSSEEEEESEETTTTEECSS--------CCC-CSSCEEEECGGG---TTSS--
T ss_pred ecccCcCCCcCChh-h--cC------CCCCEEEEeCCCCCcceeCCc--------ccc-cCCEEEEEcccc---cCCC--
Confidence 88764433334444 2 43 378889998888999998762 233 499999999987 4433
Q ss_pred CccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHH---------------hcccCCCC
Q 037587 242 SFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATK---------------MSSFGLVS 306 (464)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~---------------~~~~~~~s 306 (464)
+ .++. ...+++.|..|.+|.+| +|+++.+++.+.. +.. ...+++++
T Consensus 179 ~-id~~---------------~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~Tp~ 239 (361)
T 3m5u_A 179 K-VDFS---------------NIALFYGGVQKNAGISG--LSCIFIRKDMLER-SKNKQIPSMLNYLTHAENQSLFNTPP 239 (361)
T ss_dssp C-CCCT---------------TEEEEEEETTTTSSCTT--CEEEEEEHHHHHH-HHTCCCCGGGCHHHHHHTTTCSSCCC
T ss_pred C-CCcc---------------cCCEEEEechhccCCCc--cEEEEEcHHHHhh-hcCCCCCceeehHHHhhcCCCCCCcc
Confidence 1 2211 22367789999999778 6888875443322 211 11224455
Q ss_pred hHHHHHHHHHcCCchhhHHH--HHHHHHHHHHHHHHHHHHHHhCC-C-eeecC---CccEEEEEecCcccccCChhHHHH
Q 037587 307 SQTQYLLSRMLSDKKFTCNY--MKENRKRLRKRKEMLVSGLKVAG-I-RCLKS---NAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 307 ~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~-~~~~~---~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
.....++..+++- +.+. ++...++.++..+++.+.|++++ + ....+ .....+.+.++.. ...+ .+
T Consensus 240 v~~i~~l~~al~~---l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~---~~~~--~~ 311 (361)
T 3m5u_A 240 TFAIYMFNLEMDW---LLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKN---KDLE--PL 311 (361)
T ss_dssp HHHHHHHHHHHHH---HHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSC---TTHH--HH
T ss_pred HHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCc---hhhh--HH
Confidence 5544444444431 1221 56666777788888999999885 5 44321 1223455666531 1112 23
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
+.. .|+++||.+++|... .+.+|+|+.. .++++++.+++.|+++.++++
T Consensus 312 ~~~-~L~~~gI~~~~g~~~----~g~iRiS~~~~~t~edId~l~~al~~~~~~~~ 361 (361)
T 3m5u_A 312 FVK-EAEEAGMIGLKGHRI----LGGIRASIYNALNLDQVKTLCEFMKEFQGKYA 361 (361)
T ss_dssp HHH-HHHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHH-HHHHCCCEEecCCCc----cCeEEEEccCCCCHHHHHHHHHHHHHHHHhcC
Confidence 554 456789999887542 2459999987 789999999999999988753
No 229
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.72 E-value=4.6e-17 Score=160.69 Aligned_cols=287 Identities=13% Similarity=0.094 Sum_probs=184.3
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCC-CcEEE-eCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEE
Q 037587 85 GFPDAKKELVKLMARIRGNKVKFDP-NKLVL-TAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVP 160 (464)
Q Consensus 85 g~~~lr~~ia~~~~~~~~~~~~~~~-~~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~ 160 (464)
-..+.|+.++++++ ++. .+|++ |+|+|+++++++..++.+||+|++..-++.+. ...++.. | ++..
T Consensus 73 ~~~~ar~~la~ll~--------~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~-G-~v~~ 142 (386)
T 3qm2_A 73 VAEEAEQDFRDLLN--------IPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKY-C-APQI 142 (386)
T ss_dssp CCHHHHHHHHHHHT--------CCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTT-S-EEEE
T ss_pred HHHHHHHHHHHHhC--------CCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHh-C-CeEE
Confidence 46889999999997 433 46888 69999999999999999999987554443222 2234444 8 8888
Q ss_pred EecC-CCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 161 IHCS-SSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 161 v~~~-~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
++.+ ++.++.++++.++..++ +++++|.+++-.|.||.. .|.++ |. +|+++++|.+.+ ++.
T Consensus 143 v~~~~~~~G~~~~~~~~~~~l~------~~t~lV~~~h~et~tG~~i~pi~~---i~-----~g~~~~vDa~qs---~g~ 205 (386)
T 3qm2_A 143 IDAKITVDGKRAVKPMREWQLS------DNAAYLHYCPNETIDGIAIDETPD---FG-----PEVVVTADFSST---ILS 205 (386)
T ss_dssp EECEEEETTEEEECCGGGCCCC------TTCSCEEECSEETTTTEECCCCCC---CC-----TTCCEEEECTTT---TTS
T ss_pred EecCcccCCCCCCchHHHhhcC------CCCcEEEEECCcCCcCEecCchhh---hc-----CCCEEEEEcccc---cCC
Confidence 8876 12333356666665553 378888888888889996 55444 32 699999999987 443
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHH-------------HHHHHhcccCCC
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVV-------------SAATKMSSFGLV 305 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~-------------~~~~~~~~~~~~ 305 (464)
. + .++..+ + +++.|..|.+|.+| +|+++.+++.+. ........+++.
T Consensus 206 ~--p-idv~~~-------------~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp 265 (386)
T 3qm2_A 206 A--P-LDVSRY-------------G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTP 265 (386)
T ss_dssp S--C-CCGGGC-------------S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------
T ss_pred C--C-CCcccc-------------C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCC
Confidence 3 1 232222 3 35689999999778 788877543210 011111122334
Q ss_pred ChHHHHHHHHHcCCchhhHHH--HHHHHHHHHHHHHHHHHHHHhCCCe-ee--c-CCccEEEEEecCcccccCChhHHHH
Q 037587 306 SSQTQYLLSRMLSDKKFTCNY--MKENRKRLRKRKEMLVSGLKVAGIR-CL--K-SNAGLFCWVDMRHLLVSNTFEAEKE 379 (464)
Q Consensus 306 s~~~q~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~-~~--~-~~~g~f~~~~l~~~~~~~~~~~~~~ 379 (464)
+.....++..+++ ++.+. ++...++.++..+++.+.|++.|+. .. + ..+...+.+.++.. ..+ .+
T Consensus 266 ~v~~i~~l~~Al~---~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~----~~~--~~ 336 (386)
T 3qm2_A 266 PTFAWYLSGLVFK---WLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADN----TLD--KV 336 (386)
T ss_dssp CCSHHHHHHHHHH---HHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSG----GGH--HH
T ss_pred cHHHHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCc----ccc--HH
Confidence 4444444444443 22222 6667777888888999999887752 21 1 12233555666631 111 23
Q ss_pred HHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 380 LWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 380 l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
+... |+++||.+++|... .+.+|+|+.. .++++++.+++.|+++.+++
T Consensus 337 ~~~~-L~~~gI~~~~g~~~----~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 337 FLEE-SFAAGLHALKGHRV----VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp HHHH-HHHTTEECCBCCTT----TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHCCCEEeCCCCC----cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5555 56789999887543 2459999987 78999999999999998764
No 230
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.72 E-value=1.2e-15 Score=153.13 Aligned_cols=340 Identities=12% Similarity=0.058 Sum_probs=196.6
Q ss_pred CCCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCC-CCCCcHHHHHHHHHHHHHHcC
Q 037587 28 PYDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQ-DYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 28 ~y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~ 102 (464)
.|..+.+...+||+..+ .+.+ ..|.+.+++.++.+ ....+. +..-..+|.+.|++.+.
T Consensus 79 ~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~-------------~~~~~~~~~~~~~~lae~l~~~~p---- 141 (454)
T 4ao9_A 79 AALWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQ-------------GGINLTGHNLLEGRLARLICERFP---- 141 (454)
T ss_dssp TEEEETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHH-------------TCSCCCSEESSHHHHHHHHHHHST----
T ss_pred CEEEECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHh-------------cCCCccCCcHHHHHHHHHHHHhCC----
Confidence 34555667789998755 3444 34667776665422 111111 11223556565655542
Q ss_pred CCCCCCCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCC-----CcEEEEEecCCCCCcccCHHH
Q 037587 103 NKVKFDPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRP-----GVEIVPIHCSSSNGFRITISA 175 (464)
Q Consensus 103 ~~~~~~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~-----g~~~~~v~~~~~~~~~~d~~~ 175 (464)
..+.+.++++++|++..+++... ...++|+...-+|.+......... ......+|. -|++.
T Consensus 142 -----~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~ 209 (454)
T 4ao9_A 142 -----QIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQT 209 (454)
T ss_dssp -----TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHH
T ss_pred -----CCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHH
Confidence 45789999999999999988753 234688888888876543322110 123333332 26888
Q ss_pred HHHHHHHHhhcCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhcc
Q 037587 176 LENAYQQAQTLNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDR 253 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~ 253 (464)
+++.+++. ++++.+|++ -| ....|.+ .+++.+++|.++|+++|+++|.||+..+ .. +. . ...+...
T Consensus 210 l~~~l~~~---~~~iAavIv-EPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~-G~--~--~a~e~~g-- 277 (454)
T 4ao9_A 210 ARAQIERH---GPEIAVVLV-EPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RL-AP--H--GLANKLG-- 277 (454)
T ss_dssp HHHHHHHT---GGGEEEEEE-CSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GG-ST--T--CHHHHHT--
T ss_pred HHHHHhhc---CCceEEEEe-ccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CC-cc--c--cchhccC--
Confidence 88888752 346666555 45 4556755 4677899999999999999999999974 22 22 1 1111111
Q ss_pred CcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHh-cc-----cCCCChHHHHHHHHHc---CCchhhH
Q 037587 254 NIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKM-SS-----FGLVSSQTQYLLSRML---SDKKFTC 324 (464)
Q Consensus 254 ~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~-~~-----~~~~s~~~q~~~~~~l---~~~~~~~ 324 (464)
..+. +-+++|.+| .|+.+|.++++ +.+.+.+... .. .++.++++.+++.+.| .++++ .
T Consensus 278 -------v~PD---i~t~gK~lg-gG~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~-~ 344 (454)
T 4ao9_A 278 -------IRSD---LTTLGKYIG-GGMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEA-A 344 (454)
T ss_dssp -------CCCS---EEEEEGGGG-TTSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHH-H
T ss_pred -------CCCc---EEEeccccC-CCCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccCh-h
Confidence 1122 338999998 89999999984 4454444221 11 1234666666655554 34433 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCccEEEEEecCccc-------ccCChhHHHHHHHHHHHhcCeEEeCCCC
Q 037587 325 NYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLFCWVDMRHLL-------VSNTFEAEKELWKKIIFEVGLNISPGSS 397 (464)
Q Consensus 325 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~g~f~~~~l~~~~-------~~~~~~~~~~l~~~ll~~~gI~v~pg~~ 397 (464)
+.++++-+.+++ .|.+.+.+.++......-|.++.+.+.... ...+......++..++ ++||++.|.
T Consensus 345 ~~~~~~g~~l~~---~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~-- 418 (454)
T 4ao9_A 345 GALAERGEALRA---RLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPR-- 418 (454)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTT--
T ss_pred HHHHHHHHHHHH---HHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCC--
Confidence 233333333333 233333444443222223446666653221 0111112234556666 569999764
Q ss_pred CCCCCCCeEEEEeecCCHHHHHHHHHHHHHHHHhhCc
Q 037587 398 CHCNEPGWFRICFANITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 398 f~~~~~~~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
+++.++.. .|++++++++++|++++.++..
T Consensus 419 ------~~~~~s~~-~T~~dId~~l~al~~~l~~~~a 448 (454)
T 4ao9_A 419 ------GFVVLSLP-LTDADIDRYVAAIGSFIGGHGA 448 (454)
T ss_dssp ------CEEECCTT-CCHHHHHHHHHHHHHHHHHSGG
T ss_pred ------CCEEEeCC-CCHHHHHHHHHHHHHHHHhccc
Confidence 23445544 6899999999999999988653
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.65 E-value=2.3e-14 Score=140.59 Aligned_cols=317 Identities=15% Similarity=0.118 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP----GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~----gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.|-+.++--+=+..| ++ .....++++|+|.++..++.+.+++ ||.|+++..+|.....++... |++++.++.
T Consensus 116 ~ltn~l~ld~L~~~G--~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~-Gl~Pv~V~p 191 (501)
T 3hl2_A 116 KITNSLVLDIIKLAG--VH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITA-GFEPVVIEN 191 (501)
T ss_dssp HHHHHHHHHHHHHTT--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEECE
T ss_pred HHHHHHHHHHHHHcC--CC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHc-CCeEEEEee
Confidence 444444443333444 32 2346889999998877777777664 499999999999999888877 999998876
Q ss_pred CC-CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccc-cCCCC
Q 037587 164 SS-SNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTV-FDSPS 240 (464)
Q Consensus 164 ~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~-~~~~~ 240 (464)
.. ++.+.+|++.++++|++. +.+..++++++| .|..|.+ +++++|+++|+++|+++++|+||.... |...
T Consensus 192 ~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~- 264 (501)
T 3hl2_A 192 VLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMH- 264 (501)
T ss_dssp EEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHH-
T ss_pred eecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhh-
Confidence 21 236889999999999874 223344455444 4433444 479999999999999999999997532 1111
Q ss_pred CCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 241 SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
-+.+..++ ..-.+++.|.+|.+-++ +..|.+...++.+.+.+....+-...++++..+...++.-+
T Consensus 265 -lp~sA~~~------------GrAD~vVqS~HK~llvp-IGG~ii~~~d~e~l~~~~~~yPGr~S~Spsldl~~tLL~lG 330 (501)
T 3hl2_A 265 -LIQQGARV------------GRIDAFVQSLDKNFMVP-VGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLG 330 (501)
T ss_dssp -HHHHHHHH------------SCCCEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHHTSCSCBCSHHHHHHHHHHHHHH
T ss_pred -hHHHHHhc------------CCCcEEEecccccceee-cCceEEEeCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 01122222 01446788999998444 33345556666555544433322223445554555544432
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh----CCCeeecCCcc-EEEEEecCcccccCChhHHHHHHHHHHHhcCeE---E
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLKV----AGIRCLKSNAG-LFCWVDMRHLLVSNTFEAEKELWKKIIFEVGLN---I 392 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~g-~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~gI~---v 392 (464)
.+.+++..++..+...+|.+.|++ +|-++.....| .-+-+.+........ ....++-..|+ .++|. |
T Consensus 331 ---r~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf-~r~vsG~Rv 405 (501)
T 3hl2_A 331 ---SNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLF-TRQVSGARV 405 (501)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHH-HTTCCSCEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHH-hcCCCccee
Confidence 223344444455555556666655 36566543322 344455543311111 12223444444 45553 4
Q ss_pred -eCCC----------CCCCCC----CCeEEEEeec-CCHHHHHHHHHHHHHHHHhhCc
Q 037587 393 -SPGS----------SCHCNE----PGWFRICFAN-ITEETLQVALQRIKVFAQSCNP 434 (464)
Q Consensus 393 -~pg~----------~f~~~~----~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~~~ 434 (464)
.+|. .|+... ..|+=++.+. +++++++.++++|.+++.+.+.
T Consensus 406 v~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~ 463 (501)
T 3hl2_A 406 VPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRK 463 (501)
T ss_dssp ECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555 455421 2467776655 7999999999999999987763
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.62 E-value=1e-13 Score=139.53 Aligned_cols=364 Identities=13% Similarity=0.081 Sum_probs=200.4
Q ss_pred CCCCCCCCCCceEEeecc--ccccc--HHHHHHHHHhhhhhHHhhhcccccccccccCCCCCCcHHHHHHHHHHHHHHcC
Q 037587 27 NPYDQLHNPSGIIQMGLA--ENQLS--FDLLESWLASNQEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRG 102 (464)
Q Consensus 27 ~~y~~~~~~~~~i~l~~~--~n~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~ 102 (464)
..|..+.+...+||+..+ .+.+. .|.+.+++.++... +.....+.. ..+....+++.+.+...
T Consensus 55 G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~----------~~~~~~~~~---~~~~~~~lae~L~~~~p 121 (456)
T 4atq_A 55 GGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAH----------FTHTCFMVT---PYEGYVAVTEQLNRLTP 121 (456)
T ss_dssp TTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHH----------CSCCTTTTS---CCHHHHHHHHHHHHHSS
T ss_pred cCEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhh----------ccCcccCcc---CcHHHHHHHHHHHHhCC
Confidence 345555667789999765 44553 46677777664221 111111111 12333445555544321
Q ss_pred CCCCC-CCCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChhhhcccCC-------------CcEEEEEecCC-
Q 037587 103 NKVKF-DPNKLVLTAGSTAANETLMFCLA--DPGDAFLLPTPYYPGFDRDLKWRP-------------GVEIVPIHCSS- 165 (464)
Q Consensus 103 ~~~~~-~~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~~-------------g~~~~~v~~~~- 165 (464)
. ..+.++++++++|++..+++... ....+|+...-+|++....+.... ...+..+|...
T Consensus 122 ----~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~ 197 (456)
T 4atq_A 122 ----GDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYP 197 (456)
T ss_dssp ----CSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCG
T ss_pred ----CCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccc
Confidence 1 24578999999999999987642 234788998889887542211000 11344444321
Q ss_pred ---CCCcccCHHHHHHHHHHHhh--cCCceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEeccccccccCC
Q 037587 166 ---SNGFRITISALENAYQQAQT--LNLKVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEIYSGTVFDS 238 (464)
Q Consensus 166 ---~~~~~~d~~~l~~~i~~~~~--~~~~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~ 238 (464)
......+.+.+++.++.... .+.++.+|++ -| ..-.|.+ .+.+.++++.++|++||+++|.||+..++.-.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAviv-EPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG 276 (456)
T 4atq_A 198 FREENPEITGAEAAKRAITMIEKQIGGDQVAAIII-EPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTG 276 (456)
T ss_dssp GGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEE-CSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred cccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEe-ccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcc
Confidence 00111134445444443322 1235665555 45 4445654 567789999999999999999999998742222
Q ss_pred CCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhc--ccCCCChHHHHHHHHH
Q 037587 239 PSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS--SFGLVSSQTQYLLSRM 316 (464)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~ 316 (464)
. . ... +... ..+. +-+++|.+| .|+.+|.+++. +.+.+.+.... ..+..++++.+++.+.
T Consensus 277 ~--~-~a~-e~~g---------v~PD---ivt~gK~lg-gg~P~~av~~~-~~i~~~~~~~~~~~Tf~gnpla~aaala~ 338 (456)
T 4atq_A 277 E--W-FAV-DHEG---------VVPD---IITMAKGIA-GGLPLSAITGR-ADLLDAVHPGGLGGTYGGNPVACAAALAA 338 (456)
T ss_dssp S--S-SGG-GGTT---------CCCS---EEEECGGGG-TTSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHH
T ss_pred c--c-ccc-cccC---------CCCc---hhhhhhccc-CcCCceeeEec-HHHHhcccccCCCCCCCCChHHHHhhHHH
Confidence 2 1 111 1110 1123 337899998 89999999984 44443332221 2233567777776666
Q ss_pred cC---CchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec--CCccEEEEEecCccccc-CChhHHHHHHHHHHHhcCe
Q 037587 317 LS---DKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK--SNAGLFCWVDMRHLLVS-NTFEAEKELWKKIIFEVGL 390 (464)
Q Consensus 317 l~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~g~f~~~~l~~~~~~-~~~~~~~~l~~~ll~~~gI 390 (464)
|+ +.++ .+..+++-+.+.++.+.+.+.+...+-+++. -.-|+++-+++...... ........++..++ ++||
T Consensus 339 L~~i~~~~l-~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gv 416 (456)
T 4atq_A 339 IDTMEQHDL-NGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACL-KEGV 416 (456)
T ss_dssp HHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTE
T ss_pred HHHHhhccH-HHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCC
Confidence 54 2222 2233333333333332232222111111110 12356777887543211 12222335666665 6799
Q ss_pred EEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 391 NISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 391 ~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
++.++..+ .+.+||.... ++++++++++++|.++++..
T Consensus 417 l~~~~g~~----~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 417 IILTCGTY----GNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp ECEEECTT----SCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 99875432 4579998876 69999999999999998753
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.57 E-value=2.5e-13 Score=132.63 Aligned_cols=302 Identities=13% Similarity=0.129 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC----cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc-----cc--CCCc
Q 037587 88 DAKKELVKLMARIRGNKVKFDPN----KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL-----KW--RPGV 156 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~----~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~--~~g~ 156 (464)
++.....++..+.++ ++.. ||-.-+|+ .|+..++.+|++|||+|+..+...+++...- .. ..|.
T Consensus 100 ~iE~la~~rak~lF~----a~~A~w~VNVQP~SGs-~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~ 174 (490)
T 3ou5_A 100 EIELLCQRRALEAFD----LDPAQWGVNVQPYSGS-PANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSI 174 (490)
T ss_dssp HHHHHHHHHHHHHTT----CCTTTEEEECCCSSHH-HHHHHHHHHHCC-CCCEECBC-----------------------
T ss_pred HHHHHHHHHHHHHhC----CCccccCCCCCcCCHH-HHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccc
Confidence 344444445555665 5655 56665555 6777888999999999999998887764321 00 0122
Q ss_pred --EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 157 --EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 157 --~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
+.++++++++ ...+|.+++++...+. +|++|+..-...| ..++ .+++.++|.+.|.++++|-++...
T Consensus 175 ~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~-----kPklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaG 243 (490)
T 3ou5_A 175 FFESMPYKLNPK-TGLIDYNQLALTARLF-----RPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISG 243 (490)
T ss_dssp -----CBCEETT-TTEECHHHHHHHHHHH-----CCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHH
T ss_pred cccccccccCCC-CCcccHHHHHHHHhhc-----CCCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhh
Confidence 4555556543 4569999999998875 8997776544344 2344 455555666789999999999654
Q ss_pred ccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCH--------------HHHHHHHHhc
Q 037587 235 VFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNE--------------RVVSAATKMS 300 (464)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~--------------~~~~~~~~~~ 300 (464)
...+. .+++.... ..++..|.+|+| .|-|-|.|.++++ .+.+.+....
T Consensus 244 LVA~g--~~psP~~~--------------ADvVTtTTHKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aV 305 (490)
T 3ou5_A 244 LVAAK--VIPSPFKH--------------ADIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAV 305 (490)
T ss_dssp HHHTT--SSCCGGGT--------------CSEEEEESSSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHH
T ss_pred hhccc--ccCCcccc--------------ceEEeccccccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhc
Confidence 44433 23343333 236688999998 7889999988542 2344444432
Q ss_pred ccC-CCChHHHHHHHHHcCCchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeeec-CCccEEEEEecCcc-cccCChhHH
Q 037587 301 SFG-LVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLK-SNAGLFCWVDMRHL-LVSNTFEAE 377 (464)
Q Consensus 301 ~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~g~f~~~~l~~~-~~~~~~~~~ 377 (464)
-++ ..++..-.+++.+..-.+.+....+...+++.++.+.|.+.|.+.|+++.. ...+..+++++... ...
T Consensus 306 FPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG------ 379 (490)
T 3ou5_A 306 FPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDG------ 379 (490)
T ss_dssp TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCH------
T ss_pred CccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCH------
Confidence 222 222222211111111111112223445556667888899999999998874 33456778888643 121
Q ss_pred HHHHHHHHHhcCeEEe----CCCCCCCCCCCeEEEEeec-----CCHHHHHHHHHHHHHHHHh
Q 037587 378 KELWKKIIFEVGLNIS----PGSSCHCNEPGWFRICFAN-----ITEETLQVALQRIKVFAQS 431 (464)
Q Consensus 378 ~~l~~~ll~~~gI~v~----pg~~f~~~~~~~~Ris~~~-----~~~e~l~~~l~~l~~~l~~ 431 (464)
..++.+|++.||.+. |+.. .+..++.+||+... ..+++++++.+-|.+++..
T Consensus 380 -~~ae~~Le~agItvNkN~iP~D~-sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~~ 440 (490)
T 3ou5_A 380 -ARAERVLELVSITANKNTCPGDR-SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp -HHHHHHHHHTTEECEEECCTTCC-CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHcCcEECCCCCCCCC-CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHHh
Confidence 245677788999985 5542 22235679999843 3678999999998887753
No 234
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.57 E-value=3e-12 Score=129.37 Aligned_cols=348 Identities=14% Similarity=0.184 Sum_probs=192.5
Q ss_pred CCCCCCCCceEEeecc--cccc--cHHHHHHHHHhhhhhHHhhhcccccccccccCCCCCC-cHHHHHHHHHHHHHHcCC
Q 037587 29 YDQLHNPSGIIQMGLA--ENQL--SFDLLESWLASNQEAVELKRNGESLFRELALFQDYHG-FPDAKKELVKLMARIRGN 103 (464)
Q Consensus 29 y~~~~~~~~~i~l~~~--~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~~~~~~~~ 103 (464)
|..+.+...+||+..+ .+.+ ..|.+.+++.++. ..+..|....+ ..+....+|+.+.+...
T Consensus 60 ~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~-------------~~l~~~~~~~~~~~~~~~~lAe~L~~~~p- 125 (473)
T 4e3q_A 60 YIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQY-------------ERFPGYHAFFGRMSDQTVMLSEKLVEVSP- 125 (473)
T ss_dssp EEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHH-------------HHCCCCCCCTTEEEHHHHHHHHHHHHHSS-
T ss_pred EEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHH-------------HhcccccccccccCHHHHHHHHHHHhhCC-
Confidence 5555566788998764 3434 3466766666542 22222322212 24455566666655422
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhc-------CCC-CeEEEcCCCCCChhhhcccCCC-----------cEEEEEecC
Q 037587 104 KVKFDPNKLVLTAGSTAANETLMFCLA-------DPG-DAFLLPTPYYPGFDRDLKWRPG-----------VEIVPIHCS 164 (464)
Q Consensus 104 ~~~~~~~~i~it~G~~~al~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~~g-----------~~~~~v~~~ 164 (464)
.+.+.|+++++++||++.+++... .++ .+|+...-+|++....+....| .....++..
T Consensus 126 ---~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p 202 (473)
T 4e3q_A 126 ---FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCP 202 (473)
T ss_dssp ---CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCC
T ss_pred ---CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCC
Confidence 345689999999999999998642 123 5788888888774322110001 112222221
Q ss_pred CC---CCcccC--------HHHHHHHHHHHhhcCC-ceEEEEEeCC-CCCCCCC-CCHHHHHHHHHHHhhCCeEEEEecc
Q 037587 165 SS---NGFRIT--------ISALENAYQQAQTLNL-KVKGVLITNP-SNPLGTA-MTHQELNHLINFSKSKRIHIVSDEI 230 (464)
Q Consensus 165 ~~---~~~~~d--------~~~l~~~i~~~~~~~~-~~~~vil~~P-~NPtG~~-~s~~~l~~i~~~~~~~~~~lI~Dea 230 (464)
.. +...-. .+++++.+.+ .++ ++.+ ++.-| ..-.|.+ .+++-+++|.++|+++|+++|.||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~~~~iAa-vi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV 278 (473)
T 4e3q_A 203 HYWRYGEEGETEEQFVARLARELEETIQR---EGADTIAG-FFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEV 278 (473)
T ss_dssp CHHHHSCTTCCHHHHHHHHHHHHHHHHHH---HCGGGEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECT
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHh---hCCCceEE-EEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCc
Confidence 00 000001 2334444433 232 4554 45456 4556765 4567899999999999999999999
Q ss_pred ccccccCCCCCCccchhhhhhccCcCCCCCCCCcEEEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHH----hcc----
Q 037587 231 YSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATK----MSS---- 301 (464)
Q Consensus 231 y~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~----~~~---- 301 (464)
..+ |+..+ .+... +... ..+.+ -+++|.++ .| +.+|.++++ +.+.+.+.. ...
T Consensus 279 ~tG--fGRtG-~~fa~-e~~g---------v~PDi---~t~~K~l~-gG~~Pl~av~~~-~~i~~~~~~~~~~~~~~~hg 340 (473)
T 4e3q_A 279 ICG--FGRTG-NTWGC-VTYD---------FTPDA---IISSKNLT-AGFFPMGAVILG-PELSKRLETAIEAIEEFPHG 340 (473)
T ss_dssp TTS--SSTTS-SSCHH-HHTT---------CCCSE---EEECGGGG-TTSSCCEEEEEC-HHHHHHHHHHHHHHSCCCCC
T ss_pred ccc--CCccc-chhHH-HhcC---------CCCCh---HHhccccc-CCCCCccccccc-HHHHHHhccccccccccccC
Confidence 997 43221 11111 1111 11233 37899998 66 999999994 445444332 111
Q ss_pred -cCCCChHHHHHHHHHcCC---chhhHHHHHHHHHHHHHHHHHHHHHHHhC----CCeeecCCccEEEEEecCcccccC-
Q 037587 302 -FGLVSSQTQYLLSRMLSD---KKFTCNYMKENRKRLRKRKEMLVSGLKVA----GIRCLKSNAGLFCWVDMRHLLVSN- 372 (464)
Q Consensus 302 -~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~g~f~~~~l~~~~~~~- 372 (464)
.++.++++.+++.+.|+- .++ .+..+ +.-++|.+.|+++ .+.-... -|+++-+++.......
T Consensus 341 ~T~~Gnpla~Aaala~L~~i~~~~l-~~~~~-------~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~gielv~~~~~~~ 411 (473)
T 4e3q_A 341 FTASGHPVGCAIALKAIDVVMNEGL-AENVR-------RLAPRFEERLKHIAERPNIGEYRG-IGFMWALEAVKDKASKT 411 (473)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHSSH-HHHHH-------HHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTTTTB
T ss_pred CCCCCCcchhhhhhhhhhhhccccH-HHHHH-------HHHHHHHHHHHHHhcCCCeeEEee-cceEEEEEEecCccccc
Confidence 123566766666665542 222 22222 2333344444332 2221222 3567767764321111
Q ss_pred ----ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 373 ----TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 373 ----~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.......+...++ ++||+++|.. +.+|++... ++++++++++++|.+++++.
T Consensus 412 ~~~~~~~~~~~~~~~~~-~~Gll~~~~g-------~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 412 PFDGNLSVSERIANTCT-DLGLICRPLG-------QSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp CCCGGGCHHHHHHHHHH-HTTEECEEET-------TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHH-HCCcEEEecC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1111234555554 6799998742 468988765 79999999999999988764
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.55 E-value=6e-14 Score=151.06 Aligned_cols=218 Identities=14% Similarity=0.120 Sum_probs=128.3
Q ss_pred CceEEEEEeCC-CCCCCCCC-CHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhhccCcCCCCCCCCcE
Q 037587 188 LKVKGVLITNP-SNPLGTAM-THQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVMDRNIDESDDLWSRI 265 (464)
Q Consensus 188 ~~~~~vil~~P-~NPtG~~~-s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v 265 (464)
.++.+|++-.- .+..|... |.+.+++|.++|++||+++|+||++.++...+. .+ . .+... ..+.+
T Consensus 593 ~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~--~f-a-~e~~g---------v~PDi 659 (831)
T 4a0g_A 593 AHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV--ET-T-TELLG---------CKPDI 659 (831)
T ss_dssp CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB--SS-T-HHHHS---------SCCSE
T ss_pred CcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC--ch-h-hHhcC---------CCCcE
Confidence 35665555432 67778754 788899999999999999999999987533333 22 1 11111 11233
Q ss_pred EEEcCCCcCCCCCc-cEEEEEEecCHHHHHHHHHh--------cccCCCChHHHHHHHHHcC---CchhhHHHHHHHHHH
Q 037587 266 HIVYSLSKDFSMPG-FRVGMIYSNNERVVSAATKM--------SSFGLVSSQTQYLLSRMLS---DKKFTCNYMKENRKR 333 (464)
Q Consensus 266 i~l~S~SK~~g~~G-lRiG~l~~~~~~~~~~~~~~--------~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~ 333 (464)
.+|||.+| .| +++|+++++ +.+.+.+... ...+..++++++++.+.|+ +.++ .+.+.++.+.
T Consensus 660 ---itlsK~L~-gG~~Plgav~~~-~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l-~~~~~~~~~~ 733 (831)
T 4a0g_A 660 ---ACFAKLLT-GGMVPLAVTLAT-DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPET-NHNITSQGKT 733 (831)
T ss_dssp ---EEECGGGG-TTSSCCEEEEEC-HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTT-CTTBCTTSSB
T ss_pred ---EEEecccc-cCccCcEEEEEC-HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHH-HHHHHHHHHH
Confidence 38999998 68 899999994 4555544321 1112356777777666554 2222 1111111111
Q ss_pred HHH-HHHHHHHHHHhCC-CeeecCCccEEEEEecCcccccC--ChhHHHHHHHHHHHhcCeEEeCCCCCCCCCCCeEEEE
Q 037587 334 LRK-RKEMLVSGLKVAG-IRCLKSNAGLFCWVDMRHLLVSN--TFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRIC 409 (464)
Q Consensus 334 ~~~-~~~~l~~~l~~~g-~~~~~~~~g~f~~~~l~~~~~~~--~~~~~~~l~~~ll~~~gI~v~pg~~f~~~~~~~~Ris 409 (464)
+++ ..+.+.+.+.++. +....+. |+++.+++....... ......++...++ ++||+++|+ .+.+|++
T Consensus 734 l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~-------g~~lrl~ 804 (831)
T 4a0g_A 734 LRELWDEELVQQISSHSAVQRVVVI-GTLFALELKADASNSGYASLYAKSLLIMLR-EDGIFTRPL-------GNVIYLM 804 (831)
T ss_dssp BCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC---------CHHHHHHHHHHH-HTTEECCCB-------TTEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecCccccccchHHHHHHHHHHH-HCCcEEEec-------CCEEEEE
Confidence 111 0122344455543 3333333 467778775321110 1122335666665 679999975 2579999
Q ss_pred eec-CCHHHHHHHHHHHHHHHHhhC
Q 037587 410 FAN-ITEETLQVALQRIKVFAQSCN 433 (464)
Q Consensus 410 ~~~-~~~e~l~~~l~~l~~~l~~~~ 433 (464)
... ++++++++++++|.+++++.+
T Consensus 805 pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 805 CGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 655 799999999999999987664
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.50 E-value=7.9e-12 Score=124.17 Aligned_cols=315 Identities=16% Similarity=0.123 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 88 DAKKELVKLMARIRGNKVKFDPNKLVLTAGSTAANETLMFCLADP----GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 88 ~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~----gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+.+.+..++-+..| ++ +....++++|+|.+...++.+.+++ ++.|+++..+|..+..++... |+.++.++.
T Consensus 98 ~~e~~~~~~~~~~lG--lp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~-Gl~p~~v~~ 173 (450)
T 3bc8_A 98 KITNSLVLNVIKLAG--VH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTA-GFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHT--CT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHT-TCEEEEECC
T ss_pred HHHHHHHHHHHHhCC--CC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHc-CCeeEEEEe
Confidence 455566666665555 21 2334688999985555555555444 899999999999999988877 999888875
Q ss_pred CC-CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCC
Q 037587 164 SS-SNGFRITISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSS 241 (464)
Q Consensus 164 ~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~ 241 (464)
.. ++.+.+|++.|+++|++.. .+.+++++.+| .+.+|.+ +++++|+++|+++|+++++|+||+.. +...
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~---~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~-~~~~-- 244 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELG---PEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQ-SSKC-- 244 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHC---GGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTT-CHHH--
T ss_pred eecCccCCcCHHHHHHHHHhcC---CCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchh-hhhh--
Confidence 32 2367899999999998742 12456677777 3455666 57899999999999999999999852 2111
Q ss_pred Cccchh-hhhhccCcCCCCCCCCcEEEEcCCCcCCCCCccEEEEEEecCHHHHHHHHHhcccCCCChHHHHHHHHHcCCc
Q 037587 242 SFISIM-EAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMSSFGLVSSQTQYLLSRMLSDK 320 (464)
Q Consensus 242 ~~~~~~-~l~~~~~~~~~~~~~~~vi~l~S~SK~~g~~GlRiG~l~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 320 (464)
..+. +... ...-..++.|.+|++. .....+++..+++...+...........++++......++..+
T Consensus 245 --~~l~~~a~~---------~~~AD~~v~S~HK~l~-a~~~~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G 312 (450)
T 3bc8_A 245 --MHLIQQGAR---------VGRIDAFVQSLDKNFM-VPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLG 312 (450)
T ss_dssp --HHHHHHHHH---------HSCCCEEEEEHHHHHS-CCSSCEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHH
T ss_pred --HhHHHHHhc---------ccCCCEEEECCccCCC-chhccEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHH
Confidence 1111 1111 0023356789999986 4445677776565554444333211123455555544444322
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH----hCCCeeecCCcc-EEEEEecCcccccCChhHHHHHHHHHHHhcC---eEE
Q 037587 321 KFTCNYMKENRKRLRKRKEMLVSGLK----VAGIRCLKSNAG-LFCWVDMRHLLVSNTFEAEKELWKKIIFEVG---LNI 392 (464)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~g-~f~~~~l~~~~~~~~~~~~~~l~~~ll~~~g---I~v 392 (464)
.+.+++..+...+..+++.+.++ ++|..+...+.+ .-..+.+........ .+..++...+. ..| .-+
T Consensus 313 ---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~-~D~tkl~i~~~-~~g~sG~~v 387 (450)
T 3bc8_A 313 ---CSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHD-KAVTQLGSMLF-TRQVSGARA 387 (450)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSS-CHHHHHHHHHH-HTTCCSCEE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccccc-CCCceeEEEec-CCCCcccee
Confidence 22233333333333344444443 336666543211 011223332211111 12233444432 334 333
Q ss_pred eC---------------CCCCCCCCCCeEEEEeec-CCHHHHHHHHHHHHHHHHhh
Q 037587 393 SP---------------GSSCHCNEPGWFRICFAN-ITEETLQVALQRIKVFAQSC 432 (464)
Q Consensus 393 ~p---------------g~~f~~~~~~~~Ris~~~-~~~e~l~~~l~~l~~~l~~~ 432 (464)
.+ |.........++=+.++. .+++++++++++|+++.++.
T Consensus 388 ~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~ 443 (450)
T 3bc8_A 388 VPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIV 443 (450)
T ss_dssp ECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 21 111111123456555554 68999999999999987655
No 237
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=80.19 E-value=5.3 Score=36.48 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=62.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
.-++||.|++..=..+...|.+.|..|++.+-.-......++.. |.+...+..|- -|.+++++.+++..+.-.+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADS-----ANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 34666666665556666778889988887654322233334444 66666776653 2567777777666555457
Q ss_pred eEEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 190 VKGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
++. +++|. .++.+. -++.++++++++.
T Consensus 104 iDi-LVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 104 IDV-LFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEE-EEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCE-EEECCCCCCCCChhhccHHHHHHHHHH
Confidence 774 55555 233332 3578888888875
No 238
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=76.68 E-value=16 Score=32.48 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=53.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADV-----TNEADATAALAFAKQEF 79 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 3445677777666556666778888988877654443333333333 55555565542 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCCC------CCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT------AMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~------~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+. ..+.+++++..+.
T Consensus 80 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 80 GHVHG-LVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp SCCCE-EEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 46664 444442 22222 2456777776654
No 239
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=74.10 E-value=9.9 Score=33.75 Aligned_cols=103 Identities=13% Similarity=0.161 Sum_probs=59.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 78 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADI-----SDPGSVKALFAEIQALT 78 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHC
Confidence 3445777777666556666778888988887654332223333333 55666666553 25677777776654444
Q ss_pred CceEEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
.+++. +++|. ..+.+. -++.++++++.+.
T Consensus 79 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 79 GGIDI-LVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp SCCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46664 44444 233332 3567777777664
No 240
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=73.26 E-value=13 Score=33.30 Aligned_cols=101 Identities=10% Similarity=0.095 Sum_probs=54.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-......+... ++..+..++. |.+.+++.++......
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dv~-------~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-GAVALYGDFS-------CETGIMAFIDLLKTQT 97 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-TCEEEECCTT-------SHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-CCeEEECCCC-------CHHHHHHHHHHHHHhc
Confidence 3445777777666555666778888877776654332222333333 5444443332 5677777777655554
Q ss_pred CceEEEEEeCCC-C-CCCCCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-N-PLGTAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-N-PtG~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. . +.....+.++++++.+.
T Consensus 98 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 98 SSLRA-VVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp SCCSE-EEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred CCCCE-EEECCCccCCCCCCCCHHHHHHHHHH
Confidence 56775 444442 1 22233455556555543
No 241
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=72.83 E-value=16 Score=32.78 Aligned_cols=103 Identities=9% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
+...++||.|++..=..+...|.+.|..|++.+-.-..... .++.. |.++..+..|- -|.+++++.+++..
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-g~~~~~~~~Dv-----t~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-GKEVLGVKADV-----SKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 33446666666655556666788889888876533221211 23334 77888888763 25677777777665
Q ss_pred hcCCceEEEEEeCCC--CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS--NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~--NPtG--~~~s~~~l~~i~~~ 217 (464)
+.-.+++ ++++|.. .+.+ .-++.++++++++.
T Consensus 80 ~~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 80 ETYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 5545777 4666663 3334 24688889888875
No 242
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=72.81 E-value=15 Score=32.92 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=60.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.|+||.|++..=..+...|.+.|..|++.+-.-.......+ . +.++..+..|- -|.+.+++.+++..+.-.++
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~-~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-E-RPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-T-CTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-h-cCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 46777777766667777788999988876543222222222 2 44566666552 25677777776655444577
Q ss_pred EEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 191 KGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 191 ~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
+ ++++|. .++.+. -++.++++++++.
T Consensus 77 D-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 77 D-VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp C-EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred C-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7 455555 233332 3577888888775
No 243
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=70.43 E-value=16 Score=33.15 Aligned_cols=103 Identities=11% Similarity=0.137 Sum_probs=58.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3445677776666556666778888988887654322222223333 55566666552 25677777776654443
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 100 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDV-LVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCE-EEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 46664 444442 2222 23567777777654
No 244
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=70.00 E-value=24 Score=31.60 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=64.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
++...++||.|++..=..+...|.+.|..|++.+-.-..... .+... |.++..+..|- -|.+.+++.+++.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-g~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-GYDAHGVAFDV-----TDELAIEAAFSKL 80 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEeeC-----CCHHHHHHHHHHH
Confidence 344456666666655566667788899998886532221111 12334 77787777663 2578888888777
Q ss_pred hhcCCceEEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
.+...+++ ++++|. .++.+. -++.++++++++.
T Consensus 81 ~~~~G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 81 DAEGIHVD-ILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HHTTCCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCc-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66666777 455655 233332 3578888888775
No 245
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=68.71 E-value=20 Score=31.96 Aligned_cols=103 Identities=9% Similarity=0.094 Sum_probs=58.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDV-----TRQDSIDAAIAATVEHA 80 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeC-----CCHHHHHHHHHHHHHHc
Confidence 3445777777666556666778888988877654322222223333 44455555542 25677777777655555
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ .-.+.+++++..+.
T Consensus 81 g~id~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 81 GGLDI-LVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp SSCCE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 56775 444442 2222 23466777776654
No 246
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=68.40 E-value=19 Score=31.98 Aligned_cols=103 Identities=12% Similarity=0.093 Sum_probs=59.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.++...+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDI-----ADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccC-----CCHHHHHHHHHHHHHHh
Confidence 3446777777766666667778888988887654322222223333 55666666653 25677776666554444
Q ss_pred CceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+. -++.+++++..+.
T Consensus 81 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 81 GAIDL-LHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SSEEE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 46774 444442 22221 2466777776654
No 247
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=68.03 E-value=37 Score=30.02 Aligned_cols=102 Identities=14% Similarity=0.073 Sum_probs=55.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++.....
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 84 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADV-----TSEKDVQTALALAKGKF 84 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHHHHC
Confidence 3445777766665556666777788888776644333333333333 44555555542 25677777766544333
Q ss_pred CceEEEEEeCCC-CCCCC--------CCCHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT--------AMTHQELNHLIN 216 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~--------~~s~~~l~~i~~ 216 (464)
.++++|| .+.. ...+. ..+.+++++..+
T Consensus 85 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 85 GRVDVAV-NCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp SCCCEEE-ECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred CCCCEEE-ECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 4666544 4442 22221 145666666655
No 248
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=67.29 E-value=35 Score=30.57 Aligned_cols=104 Identities=12% Similarity=0.084 Sum_probs=58.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
++..-++||.|++..=..+...|.+.|-.|++..-.-..- ....... |.++..+..|- -|.+++++.+++..
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR-QPRATYLPVEL-----QDDAQCRDAVAQTI 78 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc-CCCEEEEEeec-----CCHHHHHHHHHHHH
Confidence 3334455665555444556667888898777755332221 1112223 55566666653 25667776666655
Q ss_pred hcCCceEEEEEeCCC--CCCCCCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS--NPLGTAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~--NPtG~~~s~~~l~~i~~~ 217 (464)
+.-.+++ ++++|.. .+...-.+.++++++.+.
T Consensus 79 ~~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 4445777 4566652 333445677888777764
No 249
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=66.26 E-value=19 Score=32.49 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=55.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|++.|..|++..-.-.......... +.++..+..|- -|.+.+.+.+++......+
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDV-----TDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeC-----CCHHHHHHHHHHHHHhCCC
Confidence 34666666655555666677888988877654433333333333 44555555542 2567777776655444446
Q ss_pred eEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
++.++ .|.. .+.+. ..+.++++++.+.
T Consensus 80 id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 80 VDVLV-NNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp CSEEE-ECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred CCEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 66544 4442 22222 3566777766654
No 250
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=66.24 E-value=23 Score=31.85 Aligned_cols=103 Identities=8% Similarity=0.014 Sum_probs=58.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|++.|..|++..-.-.......... +.++..+..|- -|.+.+++.++.. ...
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~-~~~ 101 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNV-----TSEDSVLAAIEAA-NQL 101 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHHH-TTS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHH-HHh
Confidence 3445777777666556666778888988877653322222223333 44566666552 2567788777765 333
Q ss_pred CceEEEEEeCC-CCCCC-------CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNP-SNPLG-------TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P-~NPtG-------~~~s~~~l~~i~~~ 217 (464)
.++..++.++. ..+.+ ...+.+++++..+.
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 46665555423 12222 24666777776654
No 251
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=66.12 E-value=32 Score=30.78 Aligned_cols=103 Identities=12% Similarity=0.008 Sum_probs=58.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++.+-.-.......... +.++..+..|- -|.+.+++.+++..+.-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDL-----TNEVSVRALIDFTIDTF 83 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3345777777666556666778888988887665544444444333 44455555542 25677777766554443
Q ss_pred CceEEEEEeCCC-C-C-CC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-N-P-LG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-N-P-tG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. . + .+ .-++.+++++..+.
T Consensus 84 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 84 GRLDI-VDNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp SCCCE-EEECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 46664 444442 2 2 11 13566777776653
No 252
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=65.70 E-value=11 Score=37.75 Aligned_cols=25 Identities=12% Similarity=0.473 Sum_probs=22.4
Q ss_pred CCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 202 LGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 202 tG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
.|..|+.+++++|++.|+++++-||
T Consensus 249 ~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 249 PGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp CCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 3567999999999999999998877
No 253
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=65.64 E-value=14 Score=33.40 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=55.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+...
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 344666666655555566678888988887653322222223333 44555555542 256777777766544444
Q ss_pred ceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+++.+ ++|.. .+.+. -.+.++++++.+.
T Consensus 103 ~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKL-VANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67754 44442 22222 3567777777654
No 254
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=65.16 E-value=17 Score=32.87 Aligned_cols=103 Identities=15% Similarity=0.156 Sum_probs=57.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC---------h------hhhcccCCCcEEEEEecCCCCCcccC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG---------F------DRDLKWRPGVEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~---------~------~~~~~~~~g~~~~~v~~~~~~~~~~d 172 (464)
....++||.|+...=..+...|.+.|..|++.+-.... - ...+... |.++..+..|- -|
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDV-----RD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCT-----TC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccC-----CC
Confidence 33457777776665566667788889888775432110 0 0112223 55666666653 25
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHH
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINF 217 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~ 217 (464)
.+.+++.+++..+...+++. +++|. ..+.+...+.+++++..+.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDV-VVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCE-EEECCCcCcccCcCCHHHHHHHhhh
Confidence 67777776655444446664 44444 2333334667777776654
No 255
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=64.97 E-value=70 Score=28.14 Aligned_cols=102 Identities=10% Similarity=-0.001 Sum_probs=60.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|++..=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++...
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-GGRIVARSLDA-----RNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEECcC-----CCHHHHHHHHHHHH
Confidence 344577777776655666677888898887765433222222 2223 66777777653 25677777777665
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+. .+++. +++|.. .+.+. -.+.+++++..+.
T Consensus 80 ~~-g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 80 AH-APLEV-TIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp HH-SCEEE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hh-CCceE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 55 57774 444442 22222 3566777776654
No 256
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=64.90 E-value=28 Score=30.61 Aligned_cols=99 Identities=10% Similarity=0.122 Sum_probs=52.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|..|++..-.-.......... |+.++..++. |.+.+++.++.......+
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~-------~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVA-------DPASVERGFAEALAHLGR 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-TCEEEECCTT-------CHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCEEEEecCC-------CHHHHHHHHHHHHHHcCC
Confidence 45777766665555666677788988776543211122222233 5444433322 567777766654433346
Q ss_pred eEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
++.+| +|.. .+.+ ...+.++++++.+.
T Consensus 78 id~lv-n~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 78 LDGVV-HYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEE-ECCCCCCCCChhhCCHHHHHHHHHH
Confidence 67544 4442 2222 23466777766654
No 257
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=64.82 E-value=17 Score=31.85 Aligned_cols=100 Identities=13% Similarity=0.202 Sum_probs=53.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+...++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-GNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCceEEECCC-----CCHHHHHHHHHHHHHhcCCC
Confidence 4677776665555666678888988877654322222222222 33455565542 25677777766554443466
Q ss_pred EEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 191 KGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 191 ~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
+.++ +|. ..+.+. .++.++++++.+.
T Consensus 79 d~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 79 ELVL-HCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp SEEE-EECCCC------CCCHHHHHHHHHH
T ss_pred cEEE-ECCCCCCCCChHhCCHHHHHHHHHH
Confidence 6544 444 222222 3466777777664
No 258
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=64.69 E-value=54 Score=29.56 Aligned_cols=104 Identities=13% Similarity=0.142 Sum_probs=60.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-------h---hhhcccCCCcEEEEEecCCCCCcccCHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-------F---DRDLKWRPGVEIVPIHCSSSNGFRITISAL 176 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-------~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 176 (464)
+....++||.|+...=..+...|.+.|..|++..-.-.. . ...+... |.++..+..|- -|.+.+
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v 80 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-GGQALPIVGDI-----RDGDAV 80 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-TSEEEEEECCT-----TSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHH
Confidence 344457777777665566667788889888776443321 1 1112223 66777777653 256777
Q ss_pred HHHHHHHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 177 ENAYQQAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
++.+++..+...+++. +++|.. .+.+. -++.++++++.+.
T Consensus 81 ~~~~~~~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDI-CVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHHSCCSE-EEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777665444446774 444442 22222 3577777777654
No 259
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=64.44 E-value=18 Score=32.58 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=56.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+..
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANL-----SDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 3445677766665555666778888988877654322222333333 55666666653 25677777776554443
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 100 g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 100 EGIDI-LVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp TSCCE-EEECCCCC-----CCCHHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46764 444442 2222 12445566665543
No 260
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=64.37 E-value=25 Score=30.95 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=53.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++.+-.-...........+ +..+..|- -|.+.+++.+++..+...++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~i 76 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN--LFYFHGDV-----ADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT--EEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc--CCeEEeeC-----CCHHHHHHHHHHHHHHcCCC
Confidence 367777766655566677888898887765332222222222212 33444442 25677777776654443467
Q ss_pred EEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 191 KGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 191 ~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+. +++|.. .+.+. ..+.++++++.+.
T Consensus 77 d~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 77 DV-LVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp CE-EEECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 64 444442 22222 3566777776654
No 261
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=63.85 E-value=26 Score=31.08 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=58.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+....++||.|+...=..+...|++.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+.
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADI-----SKEADVDAAVEAALSK 80 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecC-----CCHHHHHHHHHHHHHh
Confidence 34445777777666555666778888988877654332222333333 55566666553 2567777776655444
Q ss_pred CCceEEEEEeCCC--CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS--NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~--NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++.+ +.|.. .+.+ ...+.+++++..+.
T Consensus 81 ~g~id~l-i~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 81 FGKVDIL-VNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp HSCCCEE-EECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred cCCCCEE-EECCccCCCCCCcccCCHHHHHHHHHH
Confidence 3466654 44442 2122 22467777776654
No 262
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=62.64 E-value=45 Score=29.30 Aligned_cols=102 Identities=15% Similarity=0.206 Sum_probs=55.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
...++||.|+...=..+...|.+.|..|++..-.- ......+... |.++..+..|- -|.+.+++.+++.....
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDV-----SQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHHHHHHHc
Confidence 34577777666655666677888888877654322 1111122233 55566666552 25677777666544333
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 81 g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 81 GRCDI-LVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp SCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46664 444442 2222 12466777766654
No 263
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=62.13 E-value=38 Score=30.88 Aligned_cols=103 Identities=12% Similarity=0.149 Sum_probs=57.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCC-cEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPG-VEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g-~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... + .++..+..|- -|.+.+++.+++.
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 113 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL-GAGNVIGVRLDV-----SDPGSCADAARTV 113 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS-SSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-CCCcEEEEEEeC-----CCHHHHHHHHHHH
Confidence 334566666665555566677888898887765433322222 2222 3 4566666553 2567777776655
Q ss_pred hhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...-.+++. +++|.. .+.+. -++.++++++++.
T Consensus 114 ~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 114 VDAFGALDV-VCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHHSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444446664 444442 22222 3577788777764
No 264
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=60.58 E-value=1e+02 Score=28.67 Aligned_cols=101 Identities=14% Similarity=0.146 Sum_probs=57.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----------hhhhcccCCCcEEEEEecCCCCCcccCHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG----------FDRDLKWRPGVEIVPIHCSSSNGFRITISALEN 178 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 178 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. ....+... |.++..+..|- -|.+.+++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-g~~~~~~~~Dv-----~d~~~v~~ 118 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-GGKALPCIVDV-----RDEQQISA 118 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHH
Confidence 3456677666655556667788889887776433221 11122333 66777777653 25677777
Q ss_pred HHHHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 179 AYQQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.+++..+...+++. +++|.. .+.+ ...+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDi-lVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDI-LVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 77765444346764 444442 2222 2356677766554
No 265
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=60.10 E-value=25 Score=31.08 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=55.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.+...+..|- -|.+.+++.+++..+..
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 81 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-GDNGKGMALNV-----TNPESIEAVLKAITDEF 81 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 3345677766665555666678888988877653322222222222 33344555542 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ ..++.++++++.+.
T Consensus 82 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 82 GGVDI-LVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CCCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 46664 444442 2222 23466777776654
No 266
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=59.11 E-value=83 Score=28.01 Aligned_cols=104 Identities=12% Similarity=0.099 Sum_probs=58.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-------hhh---hcccCCCcEEEEEecCCCCCcccCHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-------FDR---DLKWRPGVEIVPIHCSSSNGFRITISAL 176 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-------~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l 176 (464)
+....++||.|++..=..+...|.+.|.+|++..-.-.. ... ..... |.++..+..|- -|.+.+
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v 77 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-GGQGLALKCDI-----REEDQV 77 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-TSEEEEEECCT-----TCHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-CCeEEEEeCCC-----CCHHHH
Confidence 344557777776665556667788889888776433221 111 11222 56777777653 256777
Q ss_pred HHHHHHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 177 ENAYQQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 177 ~~~i~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
++.+++......+++. +++|.. ...+ ...+.++++++.+.
T Consensus 78 ~~~~~~~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 78 RAAVAATVDTFGGIDI-LVNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHHHHHHHSCCCE-EEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCE-EEECCCcccCCCcccCCHHHHHHHHhH
Confidence 7777665444446664 445442 2222 23566777776653
No 267
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=58.63 E-value=47 Score=30.20 Aligned_cols=103 Identities=14% Similarity=0.165 Sum_probs=57.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC---------CCh------hhhcccCCCcEEEEEecCCCCCcccC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY---------PGF------DRDLKWRPGVEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y---------~~~------~~~~~~~~g~~~~~v~~~~~~~~~~d 172 (464)
....++||.|++..=..+...|.+.|..|++.+-.- ..- ...+... |.++..+.+|- -|
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-GRRIIASQVDV-----RD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-CCceEEEECCC-----CC
Confidence 344577777766655666677888898887754220 000 1112223 66677777653 25
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCC-CCCC---CCCCHHHHHHHHHH
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPS-NPLG---TAMTHQELNHLINF 217 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG---~~~s~~~l~~i~~~ 217 (464)
.+.+++.+++......+++. +++|.. .+.+ .-++.++++++++.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDI-VLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCE-EEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 67777777655444346764 444442 2222 23577777777664
No 268
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=57.64 E-value=47 Score=29.32 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=54.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++......
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDV-----TIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345777766665556666778888988776543211122222223 44555565542 246677776665443334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+++.+ ++|.. .+.+ ...+.+++++..+.
T Consensus 79 ~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 1hdc_A 79 SVDGL-VNNAGISTGMFLETESVERFRKVVEI 109 (254)
T ss_dssp CCCEE-EECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 66644 44442 2222 12466666666553
No 269
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=56.83 E-value=33 Score=30.94 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=57.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-----------CCC-----h---hhhcccCCCcEEEEEecCCCCC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-----------YPG-----F---DRDLKWRPGVEIVPIHCSSSNG 168 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-----------y~~-----~---~~~~~~~~g~~~~~v~~~~~~~ 168 (464)
....++||.|++..=..+...|.+.|..|++.+-. +.. . ...+... +.++..+..|-
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv--- 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-NRRIVTAEVDV--- 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT---
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-CCceEEEEcCC---
Confidence 34457777776665566667788889888775322 100 0 0111223 55666676653
Q ss_pred cccCHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC---CCCHHHHHHHHHH
Q 037587 169 FRITISALENAYQQAQTLNLKVKGVLITNPS-NPLGT---AMTHQELNHLINF 217 (464)
Q Consensus 169 ~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~---~~s~~~l~~i~~~ 217 (464)
-|.+.+++.+++......+++. +++|.. .+.+. .++.++++++.+.
T Consensus 86 --~~~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 86 --RDYDALKAAVDSGVEQLGRLDI-IVANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp --TCHHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHhCCCCE-EEECCcccCCCCccccCCHHHHHHHHHH
Confidence 2567777776655444346664 445542 22222 3467777777664
No 270
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=55.88 E-value=19 Score=36.02 Aligned_cols=24 Identities=21% Similarity=0.528 Sum_probs=22.2
Q ss_pred CCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 203 GTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 203 G~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
|..|+.+++++|++.|+++++-||
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VI 248 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVV 248 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 568999999999999999999887
No 271
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=55.75 E-value=41 Score=29.68 Aligned_cols=102 Identities=9% Similarity=0.025 Sum_probs=53.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.++.......
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDV-----SSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 345667666655555666677788888877643222122222222 44455555542 256777777665443334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+++.+ ++|.. .+.+ ...+.+++++..+.
T Consensus 80 ~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 80 TLNVL-VNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp SCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCcccCCHHHHHHHHHh
Confidence 56644 44442 2222 12466677666653
No 272
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=55.38 E-value=1.5e+02 Score=28.48 Aligned_cols=81 Identities=15% Similarity=0.044 Sum_probs=45.7
Q ss_pred cEEEeCChHHHHHHHHHHhcC-CCCeEEEcCCCCCC---------------hhhhcccCCCcEEEEEecCCCCCcccCHH
Q 037587 111 KLVLTAGSTAANETLMFCLAD-PGDAFLLPTPYYPG---------------FDRDLKWRPGVEIVPIHCSSSNGFRITIS 174 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~---------------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 174 (464)
.++||.|++..=..+...|.. .|..|++..-.-.. ....+... |.++..+..|- -|.+
T Consensus 49 vaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~~a~~i~~Dv-----td~~ 122 (405)
T 3zu3_A 49 RVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GLYAKSINGDA-----FSDE 122 (405)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-----TSHH
T ss_pred EEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CCceEEEECCC-----CCHH
Confidence 455555554433445556777 78887764321111 11123334 77777777653 2567
Q ss_pred HHHHHHHHHhhcCCceEEEEEeCC
Q 037587 175 ALENAYQQAQTLNLKVKGVLITNP 198 (464)
Q Consensus 175 ~l~~~i~~~~~~~~~~~~vil~~P 198 (464)
.+++.+++..+.-.+++. +++|.
T Consensus 123 ~v~~~v~~i~~~~G~IDi-LVNNA 145 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQ-VIYSL 145 (405)
T ss_dssp HHHHHHHHHHHHTSCEEE-EEECC
T ss_pred HHHHHHHHHHHHcCCCCE-EEEcC
Confidence 777777776555567774 55554
No 273
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=54.86 E-value=67 Score=27.95 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=57.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-.... ..+... +.++..+..|- -|.+.+++.+++...
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-GFKARGLVLNI-----SDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 345677766665555666677788988876654322111 112223 55666666653 256778877777655
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++.+| .|.. .+.+. -.+.+++++..+.
T Consensus 79 ~~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 79 ENLAIDILV-NNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp TTCCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHHH
Confidence 555677544 4442 22222 3466777766654
No 274
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=54.51 E-value=33 Score=30.74 Aligned_cols=104 Identities=13% Similarity=0.141 Sum_probs=57.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-h---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-F---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+....++||.|++..=..+...|.+.|..|++..-.-.. . ...+... |.++..+..|- -|.+.+++.+++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~ 99 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-GGEAFAVKADV-----SQESEVEALFAA 99 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHH
Confidence 344456676666655556667788889888764321111 1 1112223 55666676653 256777777766
Q ss_pred HhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+...+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 100 ~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 100 VIERWGRLDV-LVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5444446664 444442 2222 23567777777664
No 275
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=54.34 E-value=68 Score=28.41 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=57.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---cc-CCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---KW-RPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+....++||.|++..=..+...|.+.|..|++..-.-....... .. ..+.++..+..|- -|.+.+++.+++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 34455777777666556666778888988877653322111111 11 2133466666553 256777777665
Q ss_pred HhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
......+++. +++|.. .+.+. -.+.+++++..+.
T Consensus 81 ~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 81 CERTLGCASI-LVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHCSCSE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5444346664 444442 22222 3567777777664
No 276
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=54.26 E-value=49 Score=29.65 Aligned_cols=102 Identities=15% Similarity=0.135 Sum_probs=57.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+..|- -|.+.+++.+++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDV-----RAPPAVMAAVDQAL 100 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 345777777666556666778889988877653322111111 112 55666666653 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
....+++. +++|.. .+.+ ..++.++++++.+.
T Consensus 101 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 101 KEFGRIDI-LINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 44446764 444442 2222 12567777777664
No 277
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=54.21 E-value=24 Score=35.26 Aligned_cols=109 Identities=14% Similarity=0.268 Sum_probs=60.0
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC---C---CC-----eEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCH
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD---P---GD-----AFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITI 173 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~---~---gd-----~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 173 (464)
+.++++.|.|+..+..++...+++|.+ . |. ..+...|.|+ ...+-+|-...| +.+
T Consensus 96 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~-------------~RG~mlD~aR~f-~~~ 161 (507)
T 2gjx_A 96 LTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFP-------------HRGLLLDTSRHY-LPL 161 (507)
T ss_dssp EEESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCS-------------EEEEEEETTTSC-CCH
T ss_pred EEEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcc-------------eeeeeeccCCCC-CCH
Confidence 446677899998888877777776532 1 11 1122233332 222222222333 346
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeC-----------C-------CCCCCCCCCHHHHHHHHHHHhhCCeEEEE
Q 037587 174 SALENAYQQAQTLNLKVKGVLITN-----------P-------SNPLGTAMTHQELNHLINFSKSKRIHIVS 227 (464)
Q Consensus 174 ~~l~~~i~~~~~~~~~~~~vil~~-----------P-------~NPtG~~~s~~~l~~i~~~~~~~~~~lI~ 227 (464)
+.+.+.|+......-+.-.+-++. | ..|.|..|+.+++++|++.|+++++-||-
T Consensus 162 ~~ik~~id~mA~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~Ga~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 162 SSILDTLDVMAYNKLNVFHWHLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCTHHHHHHSSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCceEEEEEecccCeeeeccccchhhhccccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 666666654432211211111111 1 12446679999999999999999988873
No 278
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=53.94 E-value=37 Score=30.43 Aligned_cols=103 Identities=10% Similarity=0.154 Sum_probs=56.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC--------CC--C---hh---hhcccCCCcEEEEEecCCCCCccc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY--------YP--G---FD---RDLKWRPGVEIVPIHCSSSNGFRI 171 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~--------y~--~---~~---~~~~~~~g~~~~~v~~~~~~~~~~ 171 (464)
....++||.|++..=..+...|.+.|..|++.+-. +. . .. ...... +.++..+..|- -
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-NRRIVAAVVDT-----R 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----T
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----C
Confidence 34457777776665566667788889888775321 10 0 01 112223 55666666653 2
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
|.+.+++.+++..+...+++. +++|.. .+.+. ..+.++++++.+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDI-IVANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 567777777665444346664 444442 22222 3566777776664
No 279
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=53.50 E-value=1.2e+02 Score=26.77 Aligned_cols=104 Identities=11% Similarity=0.063 Sum_probs=59.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC------hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG------FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~------~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
+....++||.|++..=..+...|.+.|..|++..-.-.. ....+... |.++..+..|- -|.+.+++.+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~ 82 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDL-----SNEEEVAKLF 82 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCC-----CSHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHH
Confidence 344457777777666666777888999888875321110 11112233 66777777663 2567777777
Q ss_pred HHHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 181 QQAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
++..+...+++. +++|.. .+.+. -.+.++++++.+.
T Consensus 83 ~~~~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 83 DFAEKEFGKVDI-AINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHHHCSEEE-EEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 665444446774 444442 22222 3466777776653
No 280
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=52.58 E-value=37 Score=30.52 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=54.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+.+.+++..+...++
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-GDDALCVPTDV-----TDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-TSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4556555554445555677888988877653322222223333 44455555542 25677777776554444467
Q ss_pred EEEEEeCCC--CCCCC--CCCHHHHHHHHHH
Q 037587 191 KGVLITNPS--NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 191 ~~vil~~P~--NPtG~--~~s~~~l~~i~~~ 217 (464)
+. +++|.. .+.+. -++.++++++.+.
T Consensus 104 D~-lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DV-LFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CE-EEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CE-EEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 64 445542 22221 3567777777664
No 281
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=52.46 E-value=33 Score=30.69 Aligned_cols=102 Identities=12% Similarity=0.195 Sum_probs=56.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|++..=..+...|.+.|..|++..-.- .. ....+... |.++..+..|- -|.+.+++.+++..
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-GSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34566666665555566667888898887742211 11 11122233 66677777653 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+...+++. +++|.. .+.+. -++.+++++..+.
T Consensus 92 ~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDI-AVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 44446664 444442 23232 3467777777664
No 282
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=52.46 E-value=66 Score=28.73 Aligned_cols=103 Identities=13% Similarity=0.155 Sum_probs=58.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-GHDAEAVAFDV-----TSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-TCCEEECCCCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344566766666555566677888898888765432211111 2223 55666666553 25677777777665
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
....+++. +++|.. .+.+. -++.++++++.+.
T Consensus 99 ~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDI-LVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCE-EEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 55556775 444442 22221 3567777777654
No 283
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=52.18 E-value=89 Score=28.18 Aligned_cols=103 Identities=14% Similarity=0.156 Sum_probs=58.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF----DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|.+.|..|++..-.-... ....... |.++..+..|- -|.+.+++.+++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-GVKCVLLPGDL-----SDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEESCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 344577777766655666677888898877654332111 1112233 66777777653 2567777777665
Q ss_pred hhcCCceEEEEEeCCC--CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS--NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~--NPtG~--~~s~~~l~~i~~~ 217 (464)
.+...+++. +++|.. .+.+. .++.++++++.+.
T Consensus 120 ~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 120 VRQLGSLNI-LVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHHSSCCE-EEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 444446764 444432 22221 2466777777664
No 284
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=51.74 E-value=83 Score=28.14 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-GGKALPIRCDV-----TQPDQVRGMLDQM 103 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHH
Confidence 3445677777766655666677888898887765432222221 2223 44556666552 2567777777665
Q ss_pred hhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+...+++. +++|.. .+.+ .-.+.++++++.+.
T Consensus 104 ~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 104 TGELGGIDI-AVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHHSCCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444346664 444442 2222 23467777777664
No 285
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=51.40 E-value=45 Score=29.85 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=58.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CCh---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PGF---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+....++||.|+...=..+...|.+.|..|++..-.- ... ...+... |.++..+..|- -|.+.+++.+++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-GGRAVAIRADN-----RDAEAIEQAIRE 102 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHH
Confidence 4445677777766655666677888898877652111 111 1112233 66677777653 256777777766
Q ss_pred HhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+...+++. +++|.. ...+ .-.+.++++++++.
T Consensus 103 ~~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 103 TVEALGGLDI-LVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 5444446664 444442 2222 13467777777664
No 286
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=51.16 E-value=63 Score=28.52 Aligned_cols=103 Identities=13% Similarity=0.199 Sum_probs=57.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-GGKAIGLECNV-----TDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34456676666655556666788889888776533221111 12223 55666676653 25677777766554
Q ss_pred hcCCceEEEEEeCCC--CCCCCCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS--NPLGTAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~--NPtG~~~s~~~l~~i~~~ 217 (464)
+...+++. +++|.. .+...-.+.+++++..+.
T Consensus 85 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 85 DQFGKITV-LVNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HHHSCCCE-EEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 44346664 444442 222224677777776653
No 287
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=51.08 E-value=35 Score=30.55 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-------CCC--hh------hhcccCCCcEEEEEecCCCCCcccC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-------YPG--FD------RDLKWRPGVEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-------y~~--~~------~~~~~~~g~~~~~v~~~~~~~~~~d 172 (464)
....++||.|+...=..+...|++.|..|++.+-. |.. -. ..+... |.++..+..|- -|
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-GSRIVARQADV-----RD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-TCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-CCeEEEEeCCC-----CC
Confidence 34457777776665566667788889888765422 100 00 111222 55666666653 25
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCCCCCHHHHHHHHHH
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPS-NPLGTAMTHQELNHLINF 217 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~~~s~~~l~~i~~~ 217 (464)
.+.+++.+++..+...+++. +++|.. .+.+. +.++++++.+.
T Consensus 86 ~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDI-VVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCE-EEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCE-EEECCCCCCCCC--CHHHHHHHHHH
Confidence 67777777655444346664 444442 22222 45666666553
No 288
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=51.01 E-value=52 Score=29.23 Aligned_cols=101 Identities=9% Similarity=0.087 Sum_probs=52.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+...
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 79 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADV-----SDPKAVEAVFAEALEEFG 79 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 345777766665555666777788888777543221122222222 33455555542 256777777665443334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
+++.+| +|.. .+.+ ...+.++++++.+
T Consensus 80 ~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 80 RLHGVA-HFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp CCCEEE-EGGGGTTTTC----CHHHHHHHHH
T ss_pred CCcEEE-ECCCCCCCCChhhCCHHHHHHHHH
Confidence 666544 4432 2222 1245566665554
No 289
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=50.94 E-value=1.1e+02 Score=26.77 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=56.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|++..=..+...|.+.|..|++. ...-.... ..+... |.++..+..|- -|.+.+++.+++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-GRSALAIKADL-----TNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-TSCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEcCC-----CCHHHHHHHHHHH
Confidence 34457777776665566667788889888775 32222111 112223 55566666552 2567777777665
Q ss_pred hhcCCceEEEEEeCCC-C-CCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-N-PLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-N-PtG~--~~s~~~l~~i~~~ 217 (464)
.+..++++.+ ++|.. . +.+. -++.++++++.+.
T Consensus 81 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 81 ADKFGEIHGL-VHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHHCSEEEE-EECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHhCCCCEE-EECCCccCCCCChhhCCHHHHHHHHHH
Confidence 4444467654 44442 2 2222 3566777766653
No 290
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=50.79 E-value=76 Score=28.34 Aligned_cols=103 Identities=14% Similarity=0.146 Sum_probs=57.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC---------h------hhhcccCCCcEEEEEecCCCCCcccC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG---------F------DRDLKWRPGVEIVPIHCSSSNGFRIT 172 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~---------~------~~~~~~~~g~~~~~v~~~~~~~~~~d 172 (464)
....++||.|+...=..+...|.+.|..|++.+-.-.. - ....... |.++..+..|- -|
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~ 82 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-GRRCISAKVDV-----KD 82 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-CCeEEEEeCCC-----CC
Confidence 34457777766655566667788889888775432100 0 0112223 56666676653 25
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 173 ISALENAYQQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 173 ~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+.+++.+++......+++. +++|.. .+.+ .-++.++++++.+.
T Consensus 83 ~~~v~~~~~~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDI-AITNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCE-EEECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 67777777665444346664 444442 2222 23567777776654
No 291
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=50.75 E-value=46 Score=29.32 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=53.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhccc----C-CCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKW----R-PGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
...++||.|++..=..+...|.+.|..|++..-.-......... . .+.++..++.|- -|.+.+++.+++.
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHH
Confidence 34566776666555566667778888887765332222111111 0 013445555542 2567777777665
Q ss_pred hhcCCceEEEEEeCCC-CCCC-CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLG-TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG-~~~s~~~l~~i~~~ 217 (464)
.+...+++. +++|.. ...+ ...+.+++++..+.
T Consensus 82 ~~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~v 116 (250)
T 3nyw_A 82 HQKYGAVDI-LVNAAAMFMDGSLSEPVDNFRKIMEI 116 (250)
T ss_dssp HHHHCCEEE-EEECCCCCCCCCCSCHHHHHHHHHHH
T ss_pred HHhcCCCCE-EEECCCcCCCCCCCCCHHHHHHHHHH
Confidence 444456774 444442 2222 23455666666553
No 292
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.53 E-value=47 Score=29.77 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=56.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC--------CCC--------hhhhcccCCCcEEEEEecCCCCCccc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY--------YPG--------FDRDLKWRPGVEIVPIHCSSSNGFRI 171 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~--------y~~--------~~~~~~~~~g~~~~~v~~~~~~~~~~ 171 (464)
....++||.|+...=..+...|++.|..|++.+-. |.. ....+... |.++..+..|- -
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~ 87 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-GRKALTRVLDV-----R 87 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-TCCEEEEECCT-----T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-CCeEEEEEcCC-----C
Confidence 34457777776665566667788889888775421 110 01112223 56666666653 2
Q ss_pred CHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 172 TISALENAYQQAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 172 d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
|.+.+++.+++..+...+++. +++|.. .+.+. -++.++++++.+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDV-VVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 567777777655444346664 444442 22222 2466777776654
No 293
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=50.52 E-value=68 Score=28.34 Aligned_cols=102 Identities=9% Similarity=0.043 Sum_probs=52.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++..+...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-GGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-hcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345777766665555666677788988776542211111111222 22344455442 256777777765443334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+++.+ ++|.. .+.+ .-.+.++++++.+.
T Consensus 81 ~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1nff_A 81 GLHVL-VNNAGILNIGTIEDYALTEWQRILDV 111 (260)
T ss_dssp CCCEE-EECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 56644 44442 2222 12466677666653
No 294
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=49.78 E-value=90 Score=27.58 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=56.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|++..=..+...|.+.|-.|++.+-.-... .... +.++..+..|- -|.+.+++.++++ .+
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~----g~ 78 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPR-HPRIRREELDI-----TDSQRLQRLFEAL----PR 78 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCC-CTTEEEEECCT-----TCHHHHHHHHHHC----SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhh-cCCeEEEEecC-----CCHHHHHHHHHhc----CC
Confidence 3466666666555666677888998888765432211 1222 55566666653 2567777777653 36
Q ss_pred eEEEEEeCCC-CCCCCCCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS-NPLGTAMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~-NPtG~~~s~~~l~~i~~~ 217 (464)
++ ++++|.. +.....++.++++++++.
T Consensus 79 iD-iLVNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 79 LD-VLVNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp CS-EEEECCCCCCGGGGGSHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCcccCCHHHHHHHHHH
Confidence 66 4566652 333445677888887775
No 295
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=49.45 E-value=85 Score=27.68 Aligned_cols=102 Identities=16% Similarity=0.096 Sum_probs=56.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|++.|..|++..-.-...... +... |.++..+..|- -|.+.+.+.++....
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 102 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-GGEAESHACDL-----SHSDAIAAFATGVLA 102 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCceeEEEecC-----CCHHHHHHHHHHHHH
Confidence 34566766665555556667778898887765432222111 2223 56666666653 256777777766544
Q ss_pred cCCceEEEEEeCCC--CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS--NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~--NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++.+| .|.. .+.+. ..+.++++++.+.
T Consensus 103 ~~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 103 AHGRCDVLV-NNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp HHSCCSEEE-ECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCccCCCCCcccCCHHHHHHHHHH
Confidence 444677544 4442 22222 3566777766653
No 296
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=49.27 E-value=50 Score=30.40 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=56.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC----------CCChh---hhcccCCCcEEEEEecCCCCCcccCHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY----------YPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISA 175 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~----------y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 175 (464)
...++||.|++..=..+...|++.|..|++.+-. -.... ..+... |.++..+..|- -|.+.
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~ 100 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-GGEAVADGSNV-----ADWDQ 100 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-TCEEEEECCCT-----TSHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHH
Confidence 3446666666555555666788889888875422 11111 112233 66777776653 25677
Q ss_pred HHHHHHHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 176 LENAYQQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 176 l~~~i~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+.+.+++......+++. +++|.. ...+ .-++.++++++.+.
T Consensus 101 v~~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 101 AAGLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 77777665444346664 444442 2222 23566777776654
No 297
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=49.17 E-value=66 Score=28.17 Aligned_cols=101 Identities=14% Similarity=0.124 Sum_probs=54.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPT-PYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|.+.|..|++.. ..-.... ...... +.++..+..|- -|.+.+++.+++..+
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-GFDFYASEGNV-----GDWDSTKQAFDKVKA 87 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCeeEEEecCC-----CCHHHHHHHHHHHHH
Confidence 3466665555544555667788888777643 2222222 122223 55555665542 256777777776655
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
...+++.+ +.|.. .+.+ ..++.+++++..+.
T Consensus 88 ~~g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 88 EVGEIDVL-VNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp HTCCEEEE-EECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred hcCCCCEE-EECCCCCCCCchhhCCHHHHHHHHHH
Confidence 55577754 44442 2222 23566777766654
No 298
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=49.16 E-value=86 Score=27.57 Aligned_cols=102 Identities=14% Similarity=0.203 Sum_probs=56.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... +.++..+..|- -|.+.+++.+++..+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-PGQILTVQMDV-----RNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-TTCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34566666655554556667888898887754332211111 2223 55666666653 256777777766544
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..++++. +++|.. .+.+ ..++.+++++..+.
T Consensus 80 ~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 80 KFGRIDI-LINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp HHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4446664 444442 2222 23567777777664
No 299
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=48.85 E-value=74 Score=28.48 Aligned_cols=101 Identities=14% Similarity=0.084 Sum_probs=56.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++....
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 98 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-GHDVDGSSCDV-----TSTDEVHAAVAAAVER 98 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 346777766655556667788889888776533221111 12223 56666666653 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++. +++|.. .+.+ ..++.++++++.+.
T Consensus 99 ~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 99 FGPIGI-LVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp HCSCCE-EEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 346664 444442 2222 23566777776654
No 300
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=48.51 E-value=72 Score=28.13 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... ..++..+..|- -|.+.+++.+++.....
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-ENGGFAVEVDV-----TKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-TTCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hcCCeEEEEeC-----CCHHHHHHHHHHHHHHc
Confidence 3345777766665555666777888888776543211111222212 21334444432 25677777666544333
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+ ...+.+++++..+.
T Consensus 85 g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (263)
T 3ak4_A 85 GGFDL-LCANAGVSTMRPAVDITDEEWDFNFDV 116 (263)
T ss_dssp TCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 45664 444442 2222 23466677766653
No 301
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.49 E-value=77 Score=28.02 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=58.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-GRRALSVGTDI-----TDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344577777766555666677888898887765432211111 2223 55666676653 25677777777655
Q ss_pred hcCCceEEEEEeCC-C-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNP-S-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P-~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+...+++.+ ++|. . .+.+. ..+.+++++..+.
T Consensus 84 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 84 KAYGRVDVV-INNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HHTSCCSEE-EECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEE-EECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 554567754 4444 2 12222 3566777776654
No 302
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=48.33 E-value=47 Score=30.55 Aligned_cols=102 Identities=16% Similarity=0.185 Sum_probs=56.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-------CCC--h------hhhcccCCCcEEEEEecCCCCCcccCH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-------YPG--F------DRDLKWRPGVEIVPIHCSSSNGFRITI 173 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-------y~~--~------~~~~~~~~g~~~~~v~~~~~~~~~~d~ 173 (464)
...++||.|+...=..+...|.+.|..|++.+-. +.. - ...+... |.++..+..|- -|.
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-GRRIIARQADV-----RDL 119 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-CCeEEEEECCC-----CCH
Confidence 3456666666655556667788889888775322 110 0 0112223 56677776653 256
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 174 SALENAYQQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 174 ~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+.+++.+++......+++. +++|.. .+.+ ..++.++++++++.
T Consensus 120 ~~v~~~~~~~~~~~g~iD~-lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDI-LVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 7777777665444446764 444442 2222 23567777776654
No 303
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=48.09 E-value=58 Score=28.73 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=53.1
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 108 DPNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 108 ~~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+...++||.|+ ...=..+...|.+.|..|++..-.-.. ........ + ++..+..|- -|.+.+++.+++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv-----~~~~~v~~~~~~ 85 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-G-SELVFPCDV-----ADDAQIDALFAS 85 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-T-CCCEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-C-CcEEEECCC-----CCHHHHHHHHHH
Confidence 44567777765 444445556677788887766432110 11111222 2 233444442 256777777776
Q ss_pred HhhcCCceEEEEEeCCC-CCC----CC---CCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPL----GT---AMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPt----G~---~~s~~~l~~i~~~ 217 (464)
..+...+++.+ +.|.. .+. +. ..+.+++++..+.
T Consensus 86 ~~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (271)
T 3ek2_A 86 LKTHWDSLDGL-VHSIGFAPREAIAGDFLDGLTRENFRIAHDI 127 (271)
T ss_dssp HHHHCSCEEEE-EECCCCCCGGGGSSCTTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCccCccccccCccccccCHHHHHHHHhh
Confidence 65555577754 44442 211 22 2566777766654
No 304
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=47.82 E-value=92 Score=27.65 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=52.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|..|++..-.-. . +.......+..+..|- -|.+.+++.++...+...+
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~-~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~ 87 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE---R-LKALNLPNTLCAQVDV-----TDKYTFDTAITRAEKIYGP 87 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH---H-HHTTCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH---H-HHHhhcCCceEEEecC-----CCHHHHHHHHHHHHHHCCC
Confidence 45677766665555666678888877776543211 1 1111122344444442 2567777777665444446
Q ss_pred eEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
++. +++|.. .+.+. ..+.++++++++.
T Consensus 88 iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 117 (266)
T 3p19_A 88 ADA-IVNNAGMMLLGQIDTQEANEWQRMFDV 117 (266)
T ss_dssp EEE-EEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 774 444442 22222 3466777776654
No 305
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=47.61 E-value=48 Score=29.54 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF----DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
+....++||.|+...=..+...|++.|..|++..-.-... ....... |.++..+..|- -|.+.+.+.+++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~ 100 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDA-----ASESDFIEAIQT 100 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHH
Confidence 3445677776666555666677888898877654321111 1112233 55666666653 256777777766
Q ss_pred HhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.....++++.+| .|.. .+.+ ...+.+++++..+.
T Consensus 101 ~~~~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 101 IVQSDGGLSYLV-NNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHHHHSSCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhcCCCCEEE-ECCCcCCCcccccCCHHHHHHHHHh
Confidence 544445677544 4442 2222 23566777766653
No 306
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=47.43 E-value=1.1e+02 Score=26.87 Aligned_cols=97 Identities=10% Similarity=0.105 Sum_probs=53.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|++.|..|++..-.-.. . . ..++..+..|- -|.+.+++.+++.....
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~--~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 94 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP----S--A-DPDIHTVAGDI-----SKPETADRIVREGIERF 94 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC----C--S-STTEEEEESCT-----TSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh----c--c-cCceEEEEccC-----CCHHHHHHHHHHHHHHC
Confidence 34456777666655556667788889888776532211 1 1 22444555442 25677777776554443
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++.+ ++|.. .+.+ .-.+.++++++.+.
T Consensus 95 g~iD~l-v~nAg~~~~~~~~~~~~~~~~~~~~v 126 (260)
T 3un1_A 95 GRIDSL-VNNAGVFLAKPFVEMTQEDYDHNLGV 126 (260)
T ss_dssp SCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 467754 44442 2222 23466777776654
No 307
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=47.18 E-value=31 Score=29.96 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=54.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++..-.-........ .. |.++..+..|- -|.+.+.+.+++..+.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 77 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDV-----SKAESVEEFSKKVLER 77 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHCC-HHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEecc-----CCHHHHHHHHHHHHHh
Confidence 36777766655556667777888887776543222221111 22 55666666653 2567777666554333
Q ss_pred CCceEEEEEeCC-CCCCCC--CCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNP-SNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P-~NPtG~--~~s~~~l~~i~~~ 217 (464)
.++++. +++|. ..+.+. ..+.+++++..+.
T Consensus 78 ~g~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 78 FGDVDV-VVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp HSSCSE-EEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred cCCCCE-EEECCccccccCcccCCHHHHHHHHHH
Confidence 346665 44444 223332 3467777777664
No 308
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=47.09 E-value=95 Score=27.58 Aligned_cols=100 Identities=17% Similarity=0.182 Sum_probs=55.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
.++||.|++..=..+...|.+.|..|++..-.-..... .+... |.++..+.+|- -|.+.+++.+++..+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-GGTALAQVLDV-----TDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 45666665554455666777889888776432211111 12223 56677776653 25677777776554444
Q ss_pred CceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.+++. +++|.. .+.+. -++.++++++.+.
T Consensus 80 g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDV-LVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 46774 444442 22222 3467777777664
No 309
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=46.84 E-value=85 Score=28.46 Aligned_cols=103 Identities=18% Similarity=0.277 Sum_probs=57.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|++..=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-GFDAHGVVCDV-----RHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHH
Confidence 344577777766655566667888898887765332222211 2223 55666666653 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
....+++. +++|.. .+.|. ..+.++++++.+.
T Consensus 104 ~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 104 RLLGGVDV-VFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp HHHSSCSE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HhCCCCCE-EEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 44346664 444442 22222 3566777776654
No 310
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=46.70 E-value=36 Score=30.80 Aligned_cols=80 Identities=11% Similarity=0.047 Sum_probs=47.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|++.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++.
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~---- 84 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDL-----QDLSSVRRFADGV---- 84 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCT-----TCHHHHHHHHHTC----
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCC-----CCHHHHHHHHHhc----
Confidence 3345777777666556666778888988877653332233333334 56677776653 2567777776642
Q ss_pred CceEEEEEeCC
Q 037587 188 LKVKGVLITNP 198 (464)
Q Consensus 188 ~~~~~vil~~P 198 (464)
.+++. ++.|.
T Consensus 85 ~~iD~-lv~nA 94 (291)
T 3rd5_A 85 SGADV-LINNA 94 (291)
T ss_dssp CCEEE-EEECC
T ss_pred CCCCE-EEECC
Confidence 25664 44444
No 311
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=46.57 E-value=97 Score=27.65 Aligned_cols=101 Identities=8% Similarity=0.091 Sum_probs=50.0
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCC--CChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYY--PGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y--~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+ +..=..+...|.+.|..|++..-.- .......... .++..+..|- -|.+.+++.+++..
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl-----~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDV-----ISDQEIKDLFVELG 98 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeec-----CCHHHHHHHHHHHH
Confidence 3456666654 2233444556777888877654332 1111111222 2244444442 25677777777665
Q ss_pred hcCCceEEEEEeCCC-CCC----CCC---CCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPL----GTA---MTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPt----G~~---~s~~~l~~i~~~ 217 (464)
....+++.+| .|.. .+. +.. .+.+++++..+.
T Consensus 99 ~~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (280)
T 3nrc_A 99 KVWDGLDAIV-HSIAFAPRDQLEGNFIDCVTREGFSIAHDI 138 (280)
T ss_dssp HHCSSCCEEE-ECCCCCCGGGSSSCHHHHCCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCccCCCcccCCccccccCHHHHHHHHHH
Confidence 5555677544 4442 221 111 555666665553
No 312
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=46.39 E-value=1.5e+02 Score=26.02 Aligned_cols=94 Identities=14% Similarity=0.215 Sum_probs=50.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. .. ++.+ +..|- -|.+.+++.+++......
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~-~~~~--~~~Dl-----~~~~~v~~~~~~~~~~~g 73 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EA-KYDH--IECDV-----TNPDQVKASIDHIFKEYG 73 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SC-SSEE--EECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CC-ceEE--EEecC-----CCHHHHHHHHHHHHHHcC
Confidence 3457777776666666667788888887765322111 11 3333 34332 156777777665443334
Q ss_pred ceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+++.+ ++|.. .+.+. .++.++++++.+.
T Consensus 74 ~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (264)
T 2dtx_A 74 SISVL-VNNAGIESYGKIESMSMGEWRRIIDV 104 (264)
T ss_dssp CCCEE-EECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 56654 44442 22222 2466777766653
No 313
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=46.32 E-value=49 Score=29.30 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=54.9
Q ss_pred CCCcEEEeCCh-HHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGS-TAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~-~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+ +..=..+...|++.|..|++..-.-...... +....+.++..+..|- -|.+.+++.+++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDV-----TSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCC-----CCHHHHHHHHHHH
Confidence 34457777764 3333444456777888887764332211111 2122134566666553 2567777777665
Q ss_pred hhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.+...+++.+ ++|.. .+.+. -.+.+++++..+.
T Consensus 96 ~~~~g~id~l-i~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVL-VNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 4444467754 44442 22222 3466777776664
No 314
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=46.25 E-value=73 Score=27.37 Aligned_cols=99 Identities=11% Similarity=0.021 Sum_probs=48.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++..-.-...........++.+ +..|- -|.+.+++.++.......++
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~D~-----~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP--LPGDV-----REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEE--EECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceE--EEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 466776665555566666777888777654321111122222213333 33332 25677777666543333356
Q ss_pred EEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 191 KGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 191 ~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+.+| .+.. .+.+ ...+.+++++..+.
T Consensus 80 d~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 108 (234)
T 2ehd_A 80 SALV-NNAGVGVMKPVHELTLEEWRLVLDT 108 (234)
T ss_dssp CEEE-ECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CEEE-ECCCcCCCCCcccCCHHHHHHHHHH
Confidence 6544 4332 2222 12455666665553
No 315
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=46.09 E-value=1.4e+02 Score=30.64 Aligned_cols=108 Identities=11% Similarity=0.151 Sum_probs=63.7
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---CCC--CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCC-cccCHHHHHH
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLA---DPG--DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNG-FRITISALEN 178 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~---~~g--d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~-~~~d~~~l~~ 178 (464)
+.++++.|.|+.++..++...+++|. ..+ ...+...|.|+ .+-+.+++ ... | ++++.+.+
T Consensus 41 L~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~-----------~RG~mlD~--sR~~f-~~~~~ik~ 106 (627)
T 2epl_X 41 VEGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYE-----------DLAYMADC--SRNAV-LNLSSAKK 106 (627)
T ss_dssp EEEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCS-----------EEEEEEEC--SSSCC-BCHHHHHH
T ss_pred EEEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCC-----------ccceEEec--CCCCC-CCHHHHHH
Confidence 34567788888776666665555542 222 23444455443 12223333 223 3 57788888
Q ss_pred HHHHHhhcCCceEEEEEeC----CCCC----CCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 179 AYQQAQTLNLKVKGVLITN----PSNP----LGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 179 ~i~~~~~~~~~~~~vil~~----P~NP----tG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
.|+......-+.-.+-+++ +..| .|..|+.+++++|++.|+++|+-||
T Consensus 107 ~id~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VI 162 (627)
T 2epl_X 107 MIEVLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFV 162 (627)
T ss_dssp HHHHHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 8876543332332223322 1223 4668999999999999999998887
No 316
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=46.09 E-value=61 Score=28.70 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=56.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +....+.++..+..|- -|.+.+++.+++..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344567776666555566667888898887765332211111 2222114566666553 25677777766554
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+...+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 84 ~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 84 EEFGGIDV-VCANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HHHSCCSE-EEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44446764 444442 2222 23467777777664
No 317
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=45.99 E-value=1.1e+02 Score=27.21 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=54.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.|+...=..+...|++.|..|++..-.-..... .+... +.++..+..|- -|.+.+++.+++..+.
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-GYESSGYAGDV-----SKKEEISEVINKILTE 118 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-CCceeEEECCC-----CCHHHHHHHHHHHHHh
Confidence 357777666655556667788889887774321111111 12222 55666666553 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++.|| .+.. .+.+ ...+.++++++.+.
T Consensus 119 ~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T 2c07_A 119 HKNVDILV-NNAGITRDNLFLRMKNDEWEDVLRT 151 (285)
T ss_dssp CSCCCEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHHH
Confidence 44677544 4442 2222 22456666666553
No 318
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=45.73 E-value=1.7e+02 Score=26.30 Aligned_cols=109 Identities=13% Similarity=0.128 Sum_probs=61.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChhhhcc-cCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPG--DAFLLPTPYYPGFDRDLK-WRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+++++|+++.-|+.+...+..++..+. ..|+........-..... ......+..+.-+. +-.+.++..++..+..
T Consensus 154 id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~~--D~~Vp~~~~~~~~~~L 231 (285)
T 4fhz_A 154 LPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDA--DPVVPFADMSLAGEAL 231 (285)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEETT--CSSSCTHHHHHHHHHH
T ss_pred CCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhhhhhhcCcccceeeCC--CCCcCHHHHHHHHHHH
Confidence 788999987777766666655554443 345444433322222111 11144555554332 2235566666655555
Q ss_pred hhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 184 QTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
.+.+.++...++.. .|..++.++++.+.++.+++
T Consensus 232 ~~~g~~~~~~~y~g----~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 232 AEAGFTTYGHVMKG----TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHTTCCEEEEEETT----CCSSCCHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECC----CCCCCCHHHHHHHHHHHHHH
Confidence 55565665444432 34457889999999998764
No 319
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=45.62 E-value=97 Score=27.74 Aligned_cols=104 Identities=11% Similarity=0.086 Sum_probs=58.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-hhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-FDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|++.|..|++..-.-.. ... .+....+.++..+..|- -|.+.+++.+++.
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 34457777777666566667788889888876532111 111 11111145666666552 2567777777766
Q ss_pred hhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.....+++. +++|.. .+.+. -++.++++++.+.
T Consensus 99 ~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 99 ADRFGGADI-LVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHHTSSCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 555456775 444442 22222 3467777777664
No 320
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=45.25 E-value=1.7e+02 Score=26.72 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.+=|..+.+..-+..+. .--|+++.|+ .+++.++-.+- +-| |.|++..|.|...
T Consensus 64 ~eEr~~v~~~~~~~~~g-----rvpViaGvg~~~t~~ai~la~~A~-~~Gadavlv~~P~y~~~---------------- 121 (301)
T 1xky_A 64 SEEKVALYRHVVSVVDK-----RVPVIAGTGSNNTHASIDLTKKAT-EVGVDAVMLVAPYYNKP---------------- 121 (301)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECCCSSCC----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CceEEeCCCCCCHHHHHHHHHHHH-hcCCCEEEEcCCCCCCC----------------
Confidence 45566666655443221 1237777665 66666654443 334 8899999987421
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 122 ---------s~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 174 (301)
T 1xky_A 122 ---------SQEGMYQHFKAIAEST-PLPVMLYNVPG-RSIVQISVDTVVRLSE---IENIVAIKDA 174 (301)
T ss_dssp ---------CHHHHHHHHHHHHHTC-SSCEEEEECHH-HHSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred ---------CHHHHHHHHHHHHHhc-CCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 1133333333322222 45567778775 5899999998888764 2466556554
No 321
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=45.19 E-value=60 Score=28.82 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=53.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---c-CCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---W-RPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|.+.|..|++..-.-........ . . +.++..+..|-. |.+.+++.+++.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~-----~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLA-----EPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTT-----STTHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 33456666666555556666788889888776533221111111 1 2 556666666532 345555555544
Q ss_pred hhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+...+++.+| +|.. ...+ .-.+.+++++..+.
T Consensus 93 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 93 AEAFGGLDVLV-NNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHHHTSCSEEE-EECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 33334666544 4442 2212 23566777776654
No 322
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=44.93 E-value=1.4e+02 Score=26.05 Aligned_cols=100 Identities=14% Similarity=0.161 Sum_probs=53.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
..++||.|+...=..+...|.+.|..|++..-.-. .....+... |.++..+..|- -|.+.+++.+++......
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-GVKAVHHPADL-----SDVAQIEALFALAEREFG 78 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT-SCCEEEECCCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhc-CCceEEEeCCC-----CCHHHHHHHHHHHHHHcC
Confidence 34677766655555666677788888777543221 111112222 55566666542 256777777765443334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
+++.+ ++|.. .+.+ ..++.++++++.+
T Consensus 79 ~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 79 GVDIL-VNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SCSEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 56644 44442 2222 1246667766655
No 323
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=44.65 E-value=1.3e+02 Score=24.80 Aligned_cols=108 Identities=12% Similarity=0.077 Sum_probs=57.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPG--DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
++++++++..-|..+...+..+...+. ..++...|.+..............+..+.-. .+-.++++..++..+...
T Consensus 99 ~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~p~li~~G~--~D~~v~~~~~~~~~~~l~ 176 (209)
T 3og9_A 99 LDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDFEQTVQLDDKHVFLSYAP--NDMIVPQKNFGDLKGDLE 176 (209)
T ss_dssp CCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCCCCCCCCTTCEEEEEECT--TCSSSCHHHHHHHHHHHH
T ss_pred CCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcccccccccCCCEEEEcCC--CCCccCHHHHHHHHHHHH
Confidence 566777776666666655555544443 5667666655432222221224555555433 233345555444444333
Q ss_pred hcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 185 TLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
..+.++. +... |.|..++.++++++.++..++
T Consensus 177 ~~~~~~~--~~~~---~~gH~~~~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 177 DSGCQLE--IYES---SLGHQLTQEEVLAAKKWLTET 208 (209)
T ss_dssp HTTCEEE--EEEC---SSTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCceE--EEEc---CCCCcCCHHHHHHHHHHHHhh
Confidence 3333333 3332 357778889999999887654
No 324
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=44.56 E-value=1.3e+02 Score=26.17 Aligned_cols=100 Identities=15% Similarity=0.181 Sum_probs=55.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CCh---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PGF---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++..-.- ... ...+... |.++..+..|- -|.+.+++.+++..+.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-GVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 466766666555566667888898887643221 111 1112223 66666676653 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 80 ~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 80 FGSLDV-LVNNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp HSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 446664 444442 2222 23567777776654
No 325
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=44.51 E-value=1.5e+02 Score=29.49 Aligned_cols=108 Identities=13% Similarity=0.220 Sum_probs=59.5
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC---CC--CeE------EEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCH
Q 037587 105 VKFDPNKLVLTAGSTAANETLMFCLAD---PG--DAF------LLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITI 173 (464)
Q Consensus 105 ~~~~~~~i~it~G~~~al~~~~~~l~~---~g--d~V------lv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 173 (464)
+.++++.|.|+..+..++...+++|.+ .+ ..+ +...|.|. ...+-+|-...| +.+
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~-------------~RG~mlD~aR~f-~~~ 167 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFS-------------HRGILIDTSRHY-LPV 167 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCS-------------EEEEEEESSSSC-CCH
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccc-------------eeeeeeccCCCC-CCH
Confidence 446777899998888777777766531 11 112 22333332 222222322334 456
Q ss_pred HHHHHHHHHHhhcCCceEEEEEe-C-------CCCC---------CCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 174 SALENAYQQAQTLNLKVKGVLIT-N-------PSNP---------LGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 174 ~~l~~~i~~~~~~~~~~~~vil~-~-------P~NP---------tG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+.+.+.|+......-+.-.+-++ + +.-| .|..|+.+++++|++.|+++++-||
T Consensus 168 ~~ik~~id~ma~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~Ga~~~~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 168 KIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEeeccCccceeeccchhhhhcccCcCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 66666665543222122111111 1 0011 1567999999999999999998887
No 326
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=44.30 E-value=88 Score=27.81 Aligned_cols=100 Identities=14% Similarity=0.190 Sum_probs=51.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-...........+ +..+..|- -|.+.+++.+++......
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG--AVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTT--EEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34577777766655666677888888877754221111111222213 33444432 256777776665443334
Q ss_pred ceEEEEEeCCC-C-CCCC--CCCHHHHHHHHH
Q 037587 189 KVKGVLITNPS-N-PLGT--AMTHQELNHLIN 216 (464)
Q Consensus 189 ~~~~vil~~P~-N-PtG~--~~s~~~l~~i~~ 216 (464)
+++. +++|.. . +.+. -.+.++++++.+
T Consensus 82 ~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (270)
T 1yde_A 82 RLDC-VVNNAGHHPPPQRPEETSAQGFRQLLE 112 (270)
T ss_dssp CCCE-EEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 5664 444442 1 2221 245666666555
No 327
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=44.14 E-value=1.1e+02 Score=26.93 Aligned_cols=103 Identities=13% Similarity=0.121 Sum_probs=56.0
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCCh-hhhc----ccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 108 DPNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPGF-DRDL----KWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 108 ~~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
....++||.|+ ...=..+...|.+.|..|++..-.-... .... ... +.++..+.+|- -|.+.+++.+
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~v~~~~ 92 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQV-----DSYESCEKLV 92 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCT-----TCHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCC-----CCHHHHHHHH
Confidence 44457777665 3333345566777888887764333222 1111 122 55666666553 2567777777
Q ss_pred HHHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 181 QQAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
++..+..++++.+| +|.. .+.+ .-.+.+++++..+.
T Consensus 93 ~~~~~~~g~id~li-~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 93 KDVVADFGQIDAFI-ANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHHTSCCSEEE-ECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHHcCCCCEEE-ECCCcCCCCCcccCCHHHHHHHHHh
Confidence 76655555777544 4442 2222 23466777766654
No 328
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=44.11 E-value=1.8e+02 Score=28.07 Aligned_cols=82 Identities=18% Similarity=0.088 Sum_probs=46.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCCCCCC---------------hhhhcccCCCcEEEEEecCCCCCcccCH
Q 037587 110 NKLVLTAGSTAANETLMFCLAD-PGDAFLLPTPYYPG---------------FDRDLKWRPGVEIVPIHCSSSNGFRITI 173 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~---------------~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 173 (464)
..++||.|++..=..+...|.. .|-.|++..-.-.. +...++.. |.++..+..|- -|.
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dv-----td~ 135 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDA-----FSD 135 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCT-----TSH
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecC-----CCH
Confidence 3455665555444445556777 78777664321111 11223444 77788887763 356
Q ss_pred HHHHHHHHHHhhcC-CceEEEEEeCC
Q 037587 174 SALENAYQQAQTLN-LKVKGVLITNP 198 (464)
Q Consensus 174 ~~l~~~i~~~~~~~-~~~~~vil~~P 198 (464)
+.+++.++...+.- .++++ +++|.
T Consensus 136 ~~v~~~v~~i~~~~~G~IDi-LVNNA 160 (422)
T 3s8m_A 136 AARAQVIELIKTEMGGQVDL-VVYSL 160 (422)
T ss_dssp HHHHHHHHHHHHHSCSCEEE-EEECC
T ss_pred HHHHHHHHHHHHHcCCCCCE-EEEcC
Confidence 78887777765555 67774 44544
No 329
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=43.89 E-value=1e+02 Score=27.06 Aligned_cols=100 Identities=12% Similarity=0.180 Sum_probs=55.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++. .-.-.... ..+... |.++..+..|- -|.+.+++.++...+.
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-GVKVLVVKANV-----GQPAKIKEMFQQIDET 79 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 46666666555556666788889887764 32221111 112223 56677776653 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++. +++|.. .+.+ ..++.++++++.+.
T Consensus 80 ~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 80 FGRLDV-FVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp HSCCCE-EEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 446664 444442 2222 23566777776654
No 330
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=43.85 E-value=86 Score=27.25 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=52.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEE-EEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEI-VPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~-~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++ ..+..|- -|.+.+++.++....
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~- 82 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADV-----TDAEAMTAAAAEAEA- 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCT-----TCHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEec-----CCHHHHHHHHHHHHh-
Confidence 3445777766665556666777788888776543221111222222 3334 4455442 256777777665433
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
..+++.+| ++.. .+.+ ...+.+++++..+
T Consensus 83 ~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 83 VAPVSILV-NSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp HSCCCEEE-ECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred hCCCcEEE-ECCccCCCCCcccCCHHHHHHHHH
Confidence 23566544 4432 2222 2245566666554
No 331
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=43.67 E-value=1.4e+02 Score=26.49 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=55.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|-. |.+.+.+.++..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv~-----~~~~~~~~~~~~ 104 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-GGTAQELAGDLS-----EAGAGTDLIERA 104 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-TCCEEEEECCTT-----STTHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEecCC-----CHHHHHHHHHHH
Confidence 3445577777666655666677888898887765433222221 2223 556666665532 345555555544
Q ss_pred hhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
... .+++. +++|.. .+.+. -.+.+++++..+.
T Consensus 105 ~~~-g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 105 EAI-APVDI-LVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp HHH-SCCCE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHh-CCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 333 46664 444442 22222 3567777776653
No 332
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=43.32 E-value=1.7e+02 Score=26.76 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 64 ~eEr~~vi~~~~~~~~g-----rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 121 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDG-----KIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKP----------------- 121 (306)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 45555666655443221 1237777665 6666665444221338899999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ +-.++.=|=|.
T Consensus 122 --------s~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~--~~pnIvgiKds 175 (306)
T 1o5k_A 122 --------TQEGLYQHYKYISERT-DLGIVVYNVPG-RTGVNVLPETAARIAA--DLKNVVGIXEA 175 (306)
T ss_dssp --------CHHHHHHHHHHHHTTC-SSCEEEEECHH-HHSCCCCHHHHHHHHH--HCTTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhC-CCCEEEEeCcc-ccCcCCCHHHHHHHHH--hCCCEEEEeCC
Confidence 1233333333322222 44567777775 5899999888888763 12355555554
No 333
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=43.23 E-value=1.3e+02 Score=26.68 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
++...++||.|++..=..+...|.+.|.+|++..-.-. +. ..+...+..|- -+.+.+++.++...+.
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~------~~--~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 75 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP------EG--LPEELFVEADL-----TTKEGCAIVAEATRQR 75 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC------TT--SCTTTEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch------hC--CCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34445666666655555566678889988887643211 11 11112333332 2567777777665555
Q ss_pred CCceEEEEEeCCC--CCC-C--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS--NPL-G--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~--NPt-G--~~~s~~~l~~i~~~ 217 (464)
-.+++ ++++|.. .+. | .-++.++++++++.
T Consensus 76 ~G~iD-ilVnnAG~~~~~~~~~~~~~~e~~~~~~~v 110 (261)
T 4h15_A 76 LGGVD-VIVHMLGGSSAAGGGFSALSDDDWYNELSL 110 (261)
T ss_dssp TSSCS-EEEECCCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCccCCCCcccCCHHHHHHHHHH
Confidence 55777 4555543 222 2 24677888887764
No 334
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=43.15 E-value=1.4e+02 Score=26.44 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=56.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|++..=..+...|.+.|..|++. ...-.... ..+... |.++..+..|- -|.+.+++.+++..
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-GGKALTAQADV-----SDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3456777766655556667788889888764 21111111 112233 56677776653 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+...+++. +++|.. .+.+ .-.+.++++++.+.
T Consensus 101 ~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 101 EAFGGVDV-LVNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HHHSCEEE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 44446774 445442 2222 23466667666553
No 335
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=42.98 E-value=1.3e+02 Score=26.36 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=51.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. ....... + + ..+..|- -|.+.+++.+++......
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g 76 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-G-G-AFFQVDL-----EDERERVRFVEEAAYALG 76 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-T-C-EEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-h-C-CEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 3457777666655566667788888887765432222 2222222 2 2 3344432 156677776665433334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+++. +++|.. .+.+ ...+.+++++..+.
T Consensus 77 ~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (256)
T 2d1y_A 77 RVDV-LVNNAAIAAPGSALTVRLPEWRRVLEV 107 (256)
T ss_dssp CCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6664 444442 2222 23456666666653
No 336
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=42.78 E-value=31 Score=36.82 Aligned_cols=25 Identities=16% Similarity=0.549 Sum_probs=22.5
Q ss_pred CCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 202 LGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 202 tG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
.|..|+.+++++|++.|+++++-||
T Consensus 393 ~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 393 YGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp EECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 4568999999999999999998877
No 337
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=42.78 E-value=1.1e+02 Score=26.39 Aligned_cols=103 Identities=9% Similarity=0.081 Sum_probs=52.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---c-CCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---W-RPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~-~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|.+.|..|++..-.-........ . . +.++..+..|- -|.+.+++.+++.
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~ 79 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNL-----LSEESINKAFEEI 79 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccC-----CCHHHHHHHHHHH
Confidence 33456777666555556666777788887765432111111111 1 2 44555555542 2567777777665
Q ss_pred hhcCCceEEEEEeCCCCCCC--CCCCHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPSNPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~NPtG--~~~s~~~l~~i~~ 216 (464)
.....+++.||.+-...+.+ ...+.+++++..+
T Consensus 80 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 80 YNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 44444666554432222222 1245556655554
No 338
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=42.56 E-value=1e+02 Score=27.37 Aligned_cols=103 Identities=15% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
....++||.|+...=..+...|.+.|..|++..-.-....... ... |.++..+..|- -|.+.+++.+++.
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDV-----SNYEEVKKLLEAV 93 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCC-----CCHHHHHHHHHHH
Confidence 3445777766666556666778888988777543221111111 112 45566666542 2567777776654
Q ss_pred hhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.....+++.+| +|.. ...+ .-.+.++++++.+.
T Consensus 94 ~~~~g~iD~lv-nnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 94 KEKFGKLDTVV-NAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEE-ECCCcCCCCChhhCCHHHHHHHHHH
Confidence 43334566544 4442 2222 12466777766653
No 339
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=42.52 E-value=1.8e+02 Score=25.75 Aligned_cols=95 Identities=9% Similarity=0.067 Sum_probs=49.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|++..=..+...|.+.|..|++..-.-.. ....... +..|- -|.+.+.+.+++..+..
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~--~~~Dv-----~~~~~v~~~~~~~~~~~ 79 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS------DVNVSDH--FKIDV-----TNEEEVKEAVEKTTKKY 79 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--------CTTSSEE--EECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh------ccCceeE--EEecC-----CCHHHHHHHHHHHHHHc
Confidence 34456676666655556666788889888765422111 0112233 33332 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.+++. +++|.. .+.+ ...+.++++++.+
T Consensus 80 g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (269)
T 3vtz_A 80 GRIDI-LVNNAGIEQYSPLHLTPTEIWRRIID 110 (269)
T ss_dssp SCCCE-EEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCCE-EEECCCcCCCCCcccCCHHHHHHHHH
Confidence 46764 444442 2222 2346677666554
No 340
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=42.24 E-value=1.7e+02 Score=25.37 Aligned_cols=96 Identities=4% Similarity=0.091 Sum_probs=52.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-. .... ++..+..++ -|.+.+++.+++.....
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-----~~~~-~~~~~~~D~-------~d~~~~~~~~~~~~~~~ 72 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-----QEQY-PFATEVMDV-------ADAAQVAQVCQRLLAET 72 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC-----SSCC-SSEEEECCT-------TCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh-----hhcC-CceEEEcCC-------CCHHHHHHHHHHHHHHc
Confidence 3345777766665555666777888888776543211 1222 433333332 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++.+ ++|.. .+.+ ..++.++++++.+.
T Consensus 73 g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 2fwm_X 73 ERLDAL-VNAAGILRMGATDQLSKEDWQQTFAV 104 (250)
T ss_dssp SCCCEE-EECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 567754 44442 2222 23466777776654
No 341
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=42.21 E-value=33 Score=30.94 Aligned_cols=84 Identities=13% Similarity=0.082 Sum_probs=49.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++.....
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 77 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDV-----RSLQDQKRAAERCLAAF 77 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHhc
Confidence 3445777777766666666778888988887654332223333333 55666666553 25677777766654443
Q ss_pred CceEEEEEeCC
Q 037587 188 LKVKGVLITNP 198 (464)
Q Consensus 188 ~~~~~vil~~P 198 (464)
.+++. +++|.
T Consensus 78 g~iD~-lvnnA 87 (281)
T 3zv4_A 78 GKIDT-LIPNA 87 (281)
T ss_dssp SCCCE-EECCC
T ss_pred CCCCE-EEECC
Confidence 46664 44444
No 342
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=41.96 E-value=87 Score=27.33 Aligned_cols=102 Identities=14% Similarity=0.131 Sum_probs=55.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++...
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-GAKVHVLELDV-----ADRQGVDAAVASTVE 80 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34577777766655666677888898877654321111111 1122 55566666553 256777777665443
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++.+ ++|.. .+.+. -++.++++++.+.
T Consensus 81 ~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 81 ALGGLDIL-VNNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp HHSCCSEE-EECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCchhhCCHHHHHHHHHH
Confidence 33466644 44442 22222 2466777776654
No 343
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=40.98 E-value=1.4e+02 Score=26.69 Aligned_cols=103 Identities=10% Similarity=0.039 Sum_probs=58.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-GGQAIALEADV-----SDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 344567777766655666677888898887765332222221 2223 55677777653 25677777776654
Q ss_pred hcCCceEEEEEeCCCC--CCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPSN--PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~N--PtG--~~~s~~~l~~i~~~ 217 (464)
+...+++. +++|..- +.+ .-++.++++++.+.
T Consensus 101 ~~~g~iD~-lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 101 LKFGHLDI-VVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HHHSCCCE-EEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred HHhCCCCE-EEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 44446774 4444421 112 23567777777654
No 344
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=40.97 E-value=1.1e+02 Score=26.79 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=52.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG--FDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
.++||.|+...=..+...|.+.|..|++..-.-.. ... .+... |.++..+..|- -|.+.+++.+++...
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 77 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-DQKAVFVGLDV-----TDKANFDSAIDEAAE 77 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 36677666555556666777788877765422111 111 12222 55566666553 256677766665443
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++. +++|.. .+.+. -++.++++++.+.
T Consensus 78 ~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3a28_C 78 KLGGFDV-LVNNAGIAQIKPLLEVTEEDLKQIYSV 111 (258)
T ss_dssp HHTCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 3345664 444442 22221 2466777766653
No 345
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=40.82 E-value=1e+02 Score=27.87 Aligned_cols=103 Identities=11% Similarity=0.053 Sum_probs=57.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-C----hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP-G----FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
....++||.|+...=..+...|.+.|..|++..-.-. . ........ |.++..+..|- -|.+.+++.+++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-GRKAVLLPGDL-----SDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-TCCEEECCCCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-CCcEEEEEecC-----CCHHHHHHHHHH
Confidence 3445777777666556666778888988877542211 0 11112233 66677666553 256777777665
Q ss_pred HhhcCCceEEEEEeCCCC--CCC--CCCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPSN--PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~N--PtG--~~~s~~~l~~i~~~ 217 (464)
......+++. +++|... +.+ .-++.++++++.+.
T Consensus 122 ~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 122 AREALGGLDI-LALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHHTCCCE-EEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 5444346774 4444432 222 23577777777664
No 346
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=40.14 E-value=78 Score=29.06 Aligned_cols=103 Identities=15% Similarity=0.162 Sum_probs=56.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|++.|..|++..-.-...... +... .+.++..+.+|- -|.+.+.++++...
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAADEVE 82 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34577776665555566667778898887764332211111 1111 122566666553 25677777777665
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...++++. +++|.. .+.+. ..+.++++++++.
T Consensus 83 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 83 ARFGPVSI-LCNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HHTCCEEE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCCCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 55556775 444443 22222 2466777776654
No 347
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=40.05 E-value=1.2e+02 Score=26.16 Aligned_cols=103 Identities=13% Similarity=0.189 Sum_probs=53.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccC--CCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWR--PGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... ....++.++++. -+.+.+.+.++..
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~-----~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN-----ATAQQYRELAARV 88 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT-----CCHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc-----CCHHHHHHHHHHH
Confidence 34567776666555566677888898887765332211111 1111 133444444431 2566777666655
Q ss_pred hhcCCceEEEEEeCCC--CCCC--CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS--NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~--NPtG--~~~s~~~l~~i~~~ 217 (464)
.....+++.+| .|.. .+.+ ..++.+++++..+.
T Consensus 89 ~~~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 89 EHEFGRLDGLL-HNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HHHHSCCSEEE-ECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred HHhCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHHH
Confidence 44434666544 4442 2222 13466777776654
No 348
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=39.74 E-value=1e+02 Score=26.63 Aligned_cols=104 Identities=10% Similarity=0.031 Sum_probs=50.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... ...++..+..|- -|.+.+++.++......
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 80 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAF 80 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 345667666555555666677778888776543211111111111 012344444442 25667777666543333
Q ss_pred CceEEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPSNPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG--~~~s~~~l~~i~~~ 217 (464)
.+++.||.+-...+.+ ...+.+++++..+.
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAV 112 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 4566544432222222 22466666666553
No 349
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=39.69 E-value=1.3e+02 Score=26.89 Aligned_cols=102 Identities=12% Similarity=0.176 Sum_probs=53.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC---CCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR---PGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++.++....
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 100 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIK 100 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHH
Confidence 345777776665555666677788888777643221111111110 033455555542 256777777766544
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
...+++.|| .+.. .+.+. ..+.+++++..+
T Consensus 101 ~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 101 VAGHPNIVI-NNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp HTCSCSEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEE-ECCCCCCCCccccCCHHHHHHHHH
Confidence 445667544 4332 22221 345566666554
No 350
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=39.56 E-value=1.8e+02 Score=25.26 Aligned_cols=100 Identities=15% Similarity=0.207 Sum_probs=52.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc----ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL----KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|++.|..|++..-.-....... ... +.++..+..|- -|.+.+++.++....
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDV-----SNTDIVTKTIQQIDA 88 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 35777766655555666677778877766543222221111 111 44555555542 256777777766544
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
...+++.++ .+.. ...+ ...+.+++++..+
T Consensus 89 ~~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 89 DLGPISGLI-ANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp HSCSEEEEE-ECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCcCCCCchhhCCHHHHHHHHh
Confidence 444677544 4442 2222 1246666666555
No 351
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=39.41 E-value=59 Score=28.63 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=53.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|++..=..+...|.+.|..|++..-. ........ +.++..+..|- -|.+.+++.++...+ ..
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~---~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~-~g 78 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADL-GDRARFAAADV-----TDEAAVASALDLAET-MG 78 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESS---CHHHHHHT-CTTEEEEECCT-----TCHHHHHHHHHHHHH-HS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc---hHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH-hC
Confidence 3456677666655556666788889887776431 22223333 55566666553 256677666655433 34
Q ss_pred ceEEEEEeCCC-CCCCC------CCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLGT------AMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG~------~~s~~~l~~i~~~ 217 (464)
+++. +++|.. .+.+. .++.++++++.+.
T Consensus 79 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 79 TLRI-VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp CEEE-EEECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 6764 444442 11110 1566777776654
No 352
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=39.30 E-value=1.2e+02 Score=26.54 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=49.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC--CC-------cEEEEEecCCCCCcccCHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR--PG-------VEIVPIHCSSSNGFRITISALENA 179 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--~g-------~~~~~v~~~~~~~~~~d~~~l~~~ 179 (464)
...++||.|+...=..+...|++.|..|++..-.-.......... .| .++..+..|- -|.+.+++.
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~ 81 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADV-----SEARAARCL 81 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCT-----TSHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecC-----CCHHHHHHH
Confidence 345777766665555666677778887776543221111111111 02 2334444432 246777777
Q ss_pred HHHHhhcCCce-EEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 180 YQQAQTLNLKV-KGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 180 i~~~~~~~~~~-~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
++.......++ +. ++.+.. .+.+ ...+.+++++..+
T Consensus 82 ~~~~~~~~g~i~d~-vi~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (264)
T 2pd6_A 82 LEQVQACFSRPPSV-VVSCAGITQDEFLLHMSEDDWDKVIA 121 (264)
T ss_dssp HHHHHHHHSSCCSE-EEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCeE-EEECCCcCCCcchhhCCHHHHHHHHh
Confidence 66543332344 54 444442 2222 1245566666555
No 353
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=39.15 E-value=1e+02 Score=28.32 Aligned_cols=101 Identities=15% Similarity=0.153 Sum_probs=54.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC--CCh------hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY--PGF------DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y--~~~------~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
..++||.|++..=..+...|++.|.+|++..-.- ..- ...+... +.++..+.+|- -|.+.+.+.++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dv-----td~~~v~~~~~ 79 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDV-----QSQVSVDRAID 79 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeec-----CCHHHHHHHHH
Confidence 3466766666555566677888898887642111 000 1111222 45566666553 25677777776
Q ss_pred HHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 182 QAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+......+++. +++|.. .+.|. .++.++++++.+.
T Consensus 80 ~~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~v 117 (324)
T 3u9l_A 80 QIIGEDGRIDV-LIHNAGHMVFGPAEAFTPEQFAELYDI 117 (324)
T ss_dssp HHHHHHSCCSE-EEECCCCCBCSCGGGSCHHHHHHHHHH
T ss_pred HHHHHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 65444446664 455542 22222 3466777666553
No 354
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=39.06 E-value=1.2e+02 Score=26.29 Aligned_cols=103 Identities=8% Similarity=0.061 Sum_probs=57.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... +.++..+..|- -|.+.+++.+++..
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-GGTAISVAVDV-----SDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 444577777766655666677888898887765432211111 2223 55677776653 25677777766554
Q ss_pred hcCCceEEEEEeCCCC----CCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPSN----PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~N----PtG--~~~s~~~l~~i~~~ 217 (464)
....+++.+ +.|..- +.+ ...+.+++++..+.
T Consensus 82 ~~~g~id~l-i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 82 AEFGGIDYL-VNNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp HHHSCCCEE-EECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 443466654 444421 111 13566777766653
No 355
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=38.79 E-value=1e+02 Score=27.03 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=53.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
.++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++.....
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 77 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-GGHAVAVKVDV-----SDRDQVFAAVEQARKTL 77 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 36677666555556666777888887765432111111 11222 44555666542 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.+++.+ ++|.. .+.+. .++.++++++.+.
T Consensus 78 g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 78 GGFDVI-VNNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp TCCCEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 467744 44442 22221 2466677666653
No 356
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=38.78 E-value=1.9e+02 Score=24.94 Aligned_cols=103 Identities=11% Similarity=0.110 Sum_probs=52.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|++.|..|++..-.-..... .+... +.++..+..|- -|.+.+++.++...
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-GGQAFACRCDI-----TSEQELSALADFAI 83 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-CCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 33456776665555556667788888887765432111111 11222 44555555542 25677777766543
Q ss_pred hcCCceEEEEEeCCCCCCC-CCCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPSNPLG-TAMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NPtG-~~~s~~~l~~i~~ 216 (464)
....+++.||.+-...+.+ ...+.+++++..+
T Consensus 84 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 3334666555432211111 1345666666554
No 357
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=38.71 E-value=1.2e+02 Score=26.13 Aligned_cols=99 Identities=6% Similarity=0.048 Sum_probs=50.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---c-ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---L-KWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++..-.-...... . ... +.++..+..|- -|.+.+++.+++....
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADV-----ADEGDVNAAIAATMEQ 77 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 366776665555556666777887777654322111111 1 112 44555566542 2567777777654433
Q ss_pred CCceEEEEEeCCC-CCCCC-----CCCHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLGT-----AMTHQELNHLIN 216 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG~-----~~s~~~l~~i~~ 216 (464)
..+++.|| ++.. .+.+. ..+.+++++..+
T Consensus 78 ~~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 78 FGAIDVLV-NNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp HSCCCEEE-ECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred hCCCCEEE-ECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 34566544 4332 21111 235566666555
No 358
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=38.66 E-value=1.9e+02 Score=26.05 Aligned_cols=109 Identities=21% Similarity=0.257 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .-.|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~g-----r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~----------------- 109 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVNG-----RVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKP----------------- 109 (289)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 45566666665443221 1237777665 5666655444221238899999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|.. ||..++.+.+.+|++- ..++.=|=|.
T Consensus 110 --------s~~~l~~~f~~ia~a~-~lPiilYn~P~~-tg~~l~~~~~~~La~~--~pnivgiK~s 163 (289)
T 2yxg_A 110 --------TQEGLRKHFGKVAESI-NLPIVLYNVPSR-TAVNLEPKTVKLLAEE--YSNISAVKEA 163 (289)
T ss_dssp --------CHHHHHHHHHHHHHHC-SSCEEEEECHHH-HSCCCCHHHHHHHHHH--CTTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCcCCCHHHHHHHHHh--CCCEEEEEeC
Confidence 1123333332222112 455678888853 8999999998887631 2355545443
No 359
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=38.60 E-value=1.6e+02 Score=26.83 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+.. -.|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----vpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 109 (297)
T 2rfg_A 52 EEEHKRVVALVAEQAQGR-----VPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRP----------------- 109 (297)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCC-----------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-----------------
Confidence 455555555554432211 236777665 6666665444322338999999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 110 --------s~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 110 --------SQEGLYQHFKMVHDAI-DIPIIVYNIPP-RAVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp --------CHHHHHHHHHHHHHHC-SSCEEEEECHH-HHSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhc-CCCEEEEeCcc-ccCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 1123333232221111 45567888785 3899999999888764 2355555553
No 360
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=38.40 E-value=1.2e+02 Score=25.53 Aligned_cols=68 Identities=7% Similarity=0.107 Sum_probs=37.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccC-HHHHHHHHHHHhhcCCc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRIT-ISALENAYQQAQTLNLK 189 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d-~~~l~~~i~~~~~~~~~ 189 (464)
+|+||.|+...=..+...|++.|..|.+..-.-. ......+++++..++. | .+.+.++++ +
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~----~~~~~~~~~~~~~D~~-------d~~~~~~~~~~-------~ 63 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE----QVPQYNNVKAVHFDVD-------WTPEEMAKQLH-------G 63 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG----GSCCCTTEEEEECCTT-------SCHHHHHTTTT-------T
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc----chhhcCCceEEEeccc-------CCHHHHHHHHc-------C
Confidence 3677766555555666778888877766542211 1111125555544332 4 677776654 4
Q ss_pred eEEEEEe
Q 037587 190 VKGVLIT 196 (464)
Q Consensus 190 ~~~vil~ 196 (464)
+++||.+
T Consensus 64 ~d~vi~~ 70 (219)
T 3dqp_A 64 MDAIINV 70 (219)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 6665544
No 361
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.37 E-value=1.1e+02 Score=26.93 Aligned_cols=103 Identities=11% Similarity=0.098 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC---CCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR---PGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-.......... .|.++..+..|- -|.+.+++.+++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVR 80 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445777777666556666777788888776543211111111100 033455555542 25677777766544
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
....+++. +++|.. .+.+ .-.+.+++++..+
T Consensus 81 ~~~g~id~-lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADI-LVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSE-EEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 33345664 444442 2222 1246666666655
No 362
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.24 E-value=1.5e+02 Score=27.06 Aligned_cols=109 Identities=16% Similarity=0.205 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 63 ~eEr~~v~~~~~~~~~g-----rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 120 (303)
T 2wkj_A 63 LSEREQVLEIVAEEAKG-----KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPF----------------- 120 (303)
T ss_dssp HHHHHHHHHHHHHHHTT-----TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCC-----------------
Confidence 45555566555443221 1237777665 5666655443221238899999988431
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++......+...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 121 --------s~~~l~~~f~~va~a~~~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 174 (303)
T 2wkj_A 121 --------SFEEHCDHYRAIIDSADGLPMVVYNIPA-LSGVKLTLDQINTLVT---LPGVGALXQT 174 (303)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhCCCCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEeCC
Confidence 1122222222211111115567888775 6899999998888764 2455555554
No 363
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=38.03 E-value=1.1e+02 Score=27.32 Aligned_cols=86 Identities=13% Similarity=0.050 Sum_probs=43.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChhhh---cc-cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PGFDRD---LK-WRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~---~~-~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
..++||.|+...=..+...|.+.|..|++..-.- ...... +. .. |.++..+..|-.+ ..-..+.+++.+++..
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~-~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTN-SNVLPASCEEIINSCF 101 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSC-STTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCC-ccCCHHHHHHHHHHHH
Confidence 3466666665555566667778888877654322 111111 11 22 5556666655311 0000566766666544
Q ss_pred hcCCceEEEEEeCC
Q 037587 185 TLNLKVKGVLITNP 198 (464)
Q Consensus 185 ~~~~~~~~vil~~P 198 (464)
....+++. +++|.
T Consensus 102 ~~~g~iD~-lvnnA 114 (288)
T 2x9g_A 102 RAFGRCDV-LVNNA 114 (288)
T ss_dssp HHHSCCCE-EEECC
T ss_pred HhcCCCCE-EEECC
Confidence 33346664 44444
No 364
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.99 E-value=1.9e+02 Score=25.54 Aligned_cols=102 Identities=11% Similarity=0.124 Sum_probs=54.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
+....++||.|+...=..+...|.+.|..|++..-. ...... +... +.++..+..|-. |.+.+++..+..
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~-~~~~~~~~~Dv~-----d~~~v~~~~~~~ 101 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG-GGSAEAVVADLA-----DLEGAANVAEEL 101 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT-TCEEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc-CCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 444567777776665566667788889888776522 111111 2223 667777776532 455555543322
Q ss_pred hhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.. ..+++. +++|.. .+.+. ..+.+++++..+.
T Consensus 102 ~~-~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 102 AA-TRRVDV-LVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HH-HSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred Hh-cCCCcE-EEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 22 235664 444442 22121 3467777777664
No 365
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=37.56 E-value=60 Score=26.35 Aligned_cols=59 Identities=14% Similarity=0.160 Sum_probs=37.3
Q ss_pred cccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCC-HHHHHHHHHHH-hhCCeE-EEEecccc
Q 037587 169 FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMT-HQELNHLINFS-KSKRIH-IVSDEIYS 232 (464)
Q Consensus 169 ~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s-~~~l~~i~~~~-~~~~~~-lI~Deay~ 232 (464)
+..+.+.|.+.+++. ++..|++-.|-|.-|..-. ....+.++..+ .+.++. .++||.|.
T Consensus 40 ~~~~~~~l~~li~~~-----~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDY-----TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTS-----EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHc-----CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 445678888888753 8899999999666565421 12235555333 334654 56799886
No 366
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=37.51 E-value=98 Score=27.52 Aligned_cols=102 Identities=15% Similarity=0.121 Sum_probs=54.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++..+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-GLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-TCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 3456666666555555666788889888776543221111 12222 44555555542 256777777765544
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
...+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 102 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 102 EFGALNV-LVNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HHSCCCE-EEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4346664 455542 2222 23567777777664
No 367
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=37.51 E-value=88 Score=27.23 Aligned_cols=101 Identities=15% Similarity=0.195 Sum_probs=52.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTP-YYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|.+.|..|++..- .-..... .+... |.++..+..|- -|.+.+++.+++...
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-GSDAIAVRADV-----ANAEDVTNMVKQTVD 78 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34667666655555566677788888776532 1111111 11222 55566666552 256777777765443
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++.+ ++|.. .+.+. -.+.++++++.+.
T Consensus 79 ~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 79 VFGQVDIL-VNNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp HHSCCCEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 33466654 44442 22221 2466677666653
No 368
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=37.43 E-value=1.2e+02 Score=26.94 Aligned_cols=102 Identities=14% Similarity=0.144 Sum_probs=54.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++...
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-GVEADGRTCDV-----RSVPEIEALVAAVVE 95 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 3457777666655556666777888887765422111111 11222 44565666542 256777777766544
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
.-.+++. +++|.. .+.+ .-++.++++++.+.
T Consensus 96 ~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 129 (277)
T 2rhc_B 96 RYGPVDV-LVNNAGRPGGGATAELADELWLDVVET 129 (277)
T ss_dssp HTCSCSE-EEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HhCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4446664 444442 2222 12466666666553
No 369
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=36.84 E-value=2.4e+02 Score=25.49 Aligned_cols=106 Identities=18% Similarity=0.278 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.+=|..+.+..-+..+.+ -.|+++.|+ .+++.++-. ..+.| |.|++..|.|...
T Consensus 53 ~~Er~~v~~~~~~~~~gr-----~pviaGvg~~~t~~ai~la~~-a~~~Gadavlv~~P~y~~~---------------- 110 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADGR-----IPVIAGTGANATAEAISLTQR-FNDSGIVGCLTVTPYYNRP---------------- 110 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEECCCSSHHHHHHHHHH-TTTSSCSEEEEECCCSSCC----------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEecCCccHHHHHHHHHH-HHhcCCCEEEECCCCCCCC----------------
Confidence 455555665554432211 237777665 555555533 33445 8899999987421
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ ..++.=|=|
T Consensus 111 ---------s~~~l~~~f~~ia~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnivgiK~ 162 (292)
T 2ojp_A 111 ---------SQEGLYQHFKAIAEHT-DLPQILYNVPS-RTGCDLLPETVGRLAK---VKNIIGIXE 162 (292)
T ss_dssp ---------CHHHHHHHHHHHHTTC-SSCEEEECCHH-HHSCCCCHHHHHHHHT---STTEEEC-C
T ss_pred ---------CHHHHHHHHHHHHHhc-CCCEEEEeCcc-hhccCCCHHHHHHHHc---CCCEEEEeC
Confidence 1233433333332222 34567777774 5899999998888764 235544444
No 370
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.62 E-value=1.3e+02 Score=27.48 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=40.3
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 30 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDK--GLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 34579999999998876544 45566554 345555679999999999888753 35555
No 371
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=36.47 E-value=1.1e+02 Score=26.74 Aligned_cols=101 Identities=12% Similarity=0.094 Sum_probs=51.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-hhhhcccC---CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-FDRDLKWR---PGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~---~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|.+.|..|++..-.-.. ........ .|.++..+..|- -|.+.+++.+++....
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 46666666555556666777889888776433221 11111110 034555555542 2567777766654433
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++. +++|.. .+.+ ...+.+++++..+.
T Consensus 81 ~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (260)
T 1x1t_A 81 MGRIDI-LVNNAGIQHTALIEDFPTEKWDAILAL 113 (260)
T ss_dssp HSCCSE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 345664 444442 2222 12466777666653
No 372
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=36.08 E-value=1.2e+02 Score=27.78 Aligned_cols=58 Identities=9% Similarity=0.102 Sum_probs=40.2
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 29 ~dg~iD~~~l~~lv~~li~~--Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQ--GCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 34578999999888776544 45555554 345555678999999999887663 456664
No 373
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=35.90 E-value=2.5e+02 Score=25.38 Aligned_cols=109 Identities=14% Similarity=0.242 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+.. --|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~gr-----~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 109 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANGR-----VPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP----------------- 109 (292)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-----------------
Confidence 455555555554432211 236776665 5666665444322338899999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++- -.++.=|=|.
T Consensus 110 --------s~~~l~~~f~~ia~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~~--~pnIvgiK~s 163 (292)
T 2vc6_A 110 --------TQEGIYQHFKAIDAAS-TIPIIVYNIPG-RSAIEIHVETLARIFED--CPNVKGVXDA 163 (292)
T ss_dssp --------CHHHHHHHHHHHHHHC-SSCEEEEECHH-HHSCCCCHHHHHHHHHH--CTTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhC-CCCEEEEeCcc-ccCcCCCHHHHHHHHhh--CCCEEEEecC
Confidence 1123333222221111 34567777774 58999999988887641 2355555553
No 374
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=35.80 E-value=1.6e+02 Score=25.97 Aligned_cols=83 Identities=8% Similarity=0.049 Sum_probs=45.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.+++..
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-GAKVHTFVVDC-----SNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-CCeEEEEEeeC-----CCHHHHHHHHHHHH
Confidence 344677776666555666667778888877654322111111 2222 44566666542 25677777776654
Q ss_pred hcCCceEEEEEe
Q 037587 185 TLNLKVKGVLIT 196 (464)
Q Consensus 185 ~~~~~~~~vil~ 196 (464)
....+++.||.+
T Consensus 104 ~~~g~iD~li~~ 115 (272)
T 1yb1_A 104 AEIGDVSILVNN 115 (272)
T ss_dssp HHTCCCSEEEEC
T ss_pred HHCCCCcEEEEC
Confidence 444466654433
No 375
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=35.65 E-value=1.7e+02 Score=26.19 Aligned_cols=102 Identities=12% Similarity=0.210 Sum_probs=52.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhc---cc----CCCcEEEEEecCCCCCcccCHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDL---KW----RPGVEIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
...++||.|+...=..+...|++.|..|++..-.-....... .. ..+.++..+..|- -|.+.+++.++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHH
Confidence 345777766665555666677788888776543211111111 10 0144566666552 25677777766
Q ss_pred HHhhcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 182 QAQTLNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.......+++.|| .+.. .+.+ ...+.+++++..+
T Consensus 93 ~~~~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 93 STLDTFGKINFLV-NNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEE-ECCCCCCCCchhhCCHHHHHHHHH
Confidence 5433333566544 4442 2222 1245666666555
No 376
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=35.00 E-value=1.7e+02 Score=24.63 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=38.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
..|+||.|+.-.=..+...|.+.|..|.+..-.-.. .... .+++++..++ .|.+.+.+.++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~Dl-------~d~~~~~~~~~------- 66 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK----IKIENEHLKVKKADV-------SSLDEVCEVCK------- 66 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG----CCCCCTTEEEECCCT-------TCHHHHHHHHT-------
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc----chhccCceEEEEecC-------CCHHHHHHHhc-------
Confidence 357888766655566667787888877766533111 1111 1444433322 26778887765
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
++++||.+
T Consensus 67 ~~d~vi~~ 74 (227)
T 3dhn_A 67 GADAVISA 74 (227)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEe
Confidence 45655544
No 377
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=34.98 E-value=1.4e+02 Score=26.50 Aligned_cols=102 Identities=11% Similarity=0.101 Sum_probs=54.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... | ++..+..|- -|.+.+++.+++..
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~Dv-----~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY-G-DCQAIPADL-----SSEAGARRLAQALG 100 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS-S-CEEECCCCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-ceEEEEeeC-----CCHHHHHHHHHHHH
Confidence 334577776666555566667778888877764322111111 1112 3 455555542 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
....+++.+ ++|.. ...+ .-++.++++++.+.
T Consensus 101 ~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 135 (276)
T 2b4q_A 101 ELSARLDIL-VNNAGTSWGAALESYPVSGWEKVMQL 135 (276)
T ss_dssp HHCSCCSEE-EECCCCCCCCCTTSCCSHHHHHHHHH
T ss_pred HhcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444466654 44442 2222 12456677666654
No 378
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=34.72 E-value=2.6e+02 Score=25.27 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .-.|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 52 ~~Er~~v~~~~~~~~~g-----rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 109 (294)
T 2ehh_A 52 FEEHEKVIEFAVKRAAG-----RIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP----------------- 109 (294)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 44555666655443221 1237777665 5666665444322338899999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... +..++++++|. .||..++.+.+.+|++- ..++.=|=|.
T Consensus 110 --------s~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~~--~pnivgiKds 163 (294)
T 2ehh_A 110 --------TQRGLYEHFKTVAQEV-DIPIIIYNIPS-RTCVEISVDTMFKLASE--CENIVASKES 163 (294)
T ss_dssp --------CHHHHHHHHHHHHHHC-CSCEEEEECHH-HHSCCCCHHHHHHHHHH--CTTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhc-CCCEEEEeCCc-ccCcCCCHHHHHHHHhh--CCCEEEEEeC
Confidence 1123333332221111 44567878775 48999999998887631 2355545443
No 379
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=34.48 E-value=2.1e+02 Score=24.74 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=53.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|++.|..|++..-.-.... ..+... +.++..+..|- -|.+.+++.+++..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-GHDVSSVVMDV-----TNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHH
Confidence 3445777766665555666677788888777543211111 112222 44555565542 25677777776544
Q ss_pred hcCCceEEEEEeCCCCC-CCC--CCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPSNP-LGT--AMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~NP-tG~--~~s~~~l~~i~~ 216 (464)
....+++.||.+-...+ .+. ..+.+++++..+
T Consensus 86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 33345665544322111 222 245566665554
No 380
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=34.24 E-value=1.8e+02 Score=25.44 Aligned_cols=73 Identities=16% Similarity=0.265 Sum_probs=40.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-. ... .+.. +..|- -|.+.+++.++.......
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~------~~~-~~~~--~~~Dl-----~d~~~v~~~~~~~~~~~g 86 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE------PPE-GFLA--VKCDI-----TDTEQVEQAYKEIEETHG 86 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC------CCT-TSEE--EECCT-----TSHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH------hhc-cceE--EEecC-----CCHHHHHHHHHHHHHHcC
Confidence 345777766665555666778888988776542211 111 2333 33332 256777777766544445
Q ss_pred ceEEEEE
Q 037587 189 KVKGVLI 195 (464)
Q Consensus 189 ~~~~vil 195 (464)
+++.+|.
T Consensus 87 ~iD~lv~ 93 (253)
T 2nm0_A 87 PVEVLIA 93 (253)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 6675444
No 381
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=34.22 E-value=1.8e+02 Score=26.60 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=41.0
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 25 ~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQ--GIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35679999999988876544 45566654 344555679999999999887753 466664
No 382
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=34.22 E-value=1.6e+02 Score=26.49 Aligned_cols=103 Identities=15% Similarity=0.137 Sum_probs=54.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++...
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA-GINAHGYVCDV-----TDEDGIQAMVAQIE 106 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-TCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEecC-----CCHHHHHHHHHHHH
Confidence 344577777666555666677888888877654321111111 1122 44455555542 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..-.+++. +++|.. .+.+ .-.+.++++++.+.
T Consensus 107 ~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~v 141 (291)
T 3cxt_A 107 SEVGIIDI-LVNNAGIIRRVPMIEMTAAQFRQVIDI 141 (291)
T ss_dssp HHTCCCCE-EEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHcCCCcE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 44446664 444442 2222 12466677666653
No 383
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=34.03 E-value=2.5e+02 Score=25.77 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAG---STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+.. -.|+++.| ..+++.++-.+---.-|.|++..|.|...
T Consensus 75 ~~Er~~v~~~~v~~~~gr-----vpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~----------------- 132 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVKGR-----IPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKP----------------- 132 (314)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-----------------
Confidence 455555555554432211 23676665 45666655444322348899999987521
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 133 --------s~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 185 (314)
T 3qze_A 133 --------TQEGMYQHFRHIAEAV-AIPQILYNVPG-RTSCDMLPETVERLSK---VPNIIGIKEA 185 (314)
T ss_dssp --------CHHHHHHHHHHHHHHS-CSCEEEEECHH-HHSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhc-CCCEEEEeCcc-ccCCCCCHHHHHHHhc---CCCEEEEEcC
Confidence 1122322232221112 45567777773 4899999998877763 2366556554
No 384
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.94 E-value=1.8e+02 Score=24.68 Aligned_cols=56 Identities=13% Similarity=0.053 Sum_probs=38.1
Q ss_pred cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC
Q 037587 150 LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR 222 (464)
Q Consensus 150 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~ 222 (464)
++.. |.+++.+.. .++++.+.+.+.+. ++++|.++.- +++ +...++++++.+++.+
T Consensus 112 l~~~-G~~v~~LG~------~vp~~~l~~~~~~~-----~~d~v~lS~~-~~~----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 112 LESG-GFTVYNLGV------DIEPGKFVEAVKKY-----QPDIVGMSAL-LTT----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHT-TCEEEECCS------SBCHHHHHHHHHHH-----CCSEEEEECC-SGG----GTHHHHHHHHHHHHTT
T ss_pred HHHC-CCEEEECCC------CCCHHHHHHHHHHc-----CCCEEEEecc-ccc----cHHHHHHHHHHHHhcC
Confidence 3444 999887653 26788988888764 7777777643 222 2367888888887754
No 385
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.92 E-value=1.3e+02 Score=26.57 Aligned_cols=103 Identities=14% Similarity=0.212 Sum_probs=53.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc----cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK----WRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..-.-........ ...+.++..+..|- -|.+.+++.+++..
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTATT 87 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHHH
Confidence 3457777666655556667787888887765432111111111 00144555565542 25677777766544
Q ss_pred hcCCceEEEEEeCCC-CCC-C--CCCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPL-G--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPt-G--~~~s~~~l~~i~~~ 217 (464)
....+++. +++|.. .+. + ...+.++++++.+.
T Consensus 88 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (267)
T 1iy8_A 88 ERFGRIDG-FFNNAGIEGKQNPTESFTAAEFDKVVSI 123 (267)
T ss_dssp HHHSCCSE-EEECCCCCCCCBCGGGSCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 33345664 444442 111 2 12466777766653
No 386
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.90 E-value=68 Score=27.58 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=52.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -+.+.+++.+++.. ...+
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~~~~~---~~~d 74 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDL-----ASHQEVEQLFEQLD---SIPS 74 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCT-----TCHHHHHHHHHSCS---SCCS
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecC-----CCHHHHHHHHHHHh---hcCC
Confidence 677777766556666777788887777654332223333333 44444555442 25677777765421 1223
Q ss_pred EEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 192 GVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 192 ~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
+++.|.. .+.+. ..+.+++++..+.
T Consensus 75 -~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 75 -TVVHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp -EEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred -EEEEeCCcCCCCccccCCHHHHHHHHHH
Confidence 4455552 22232 3566777776654
No 387
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=33.74 E-value=2.5e+02 Score=24.72 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=55.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++...
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-GLNVEGSVCDL-----LSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 334577777766655666677888888877654321111111 1222 55566666553 25677777776554
Q ss_pred hcC-CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLN-LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~-~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..- .+++. +++|.. .+.+ ...+.++++++.+.
T Consensus 94 ~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (273)
T 1ae1_A 94 HVFDGKLNI-LVNNAGVVIHKEAKDFTEKDYNIIMGT 129 (273)
T ss_dssp HHTTSCCCE-EEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCcE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 433 46664 444442 2222 23466777776653
No 388
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=33.66 E-value=1.4e+02 Score=26.50 Aligned_cols=103 Identities=11% Similarity=0.168 Sum_probs=56.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCc---EEEEEecCCCCCcccCHHHHHHHHH
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGV---EIVPIHCSSSNGFRITISALENAYQ 181 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~ 181 (464)
....++||.|+...=..+...|++.|..|++..-.-...... +... +. ++..+..|- -|.+.+++.++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 83 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL-GANGGAIRYEPTDI-----TNEDETARAVD 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CCSSCEEEEEECCT-----TSHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCCCceEEEEeCCC-----CCHHHHHHHHH
Confidence 344577777766655666677888898887765322111111 2222 32 666666553 25677777776
Q ss_pred HHhhcCCceEEEEEeCCC--CCCC--CCCCHHHHHHHHHH
Q 037587 182 QAQTLNLKVKGVLITNPS--NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 182 ~~~~~~~~~~~vil~~P~--NPtG--~~~s~~~l~~i~~~ 217 (464)
+..+...+++. +++|.. .+.+ .-.+.++++++.+.
T Consensus 84 ~~~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 84 AVTAWHGRLHG-VVHCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHHSCCCE-EEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 65444446664 444442 2222 23566777766553
No 389
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=33.62 E-value=2.8e+02 Score=25.31 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAG---STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+.+ -.|+++.| ..+++.++-.+---.-|.|++..|.|... .
T Consensus 60 ~~Er~~v~~~~~~~~~gr-----vpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~------~---------- 118 (309)
T 3fkr_A 60 DDERDVLTRTILEHVAGR-----VPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGAT------F---------- 118 (309)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTT------B----------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccC------C----------
Confidence 455555555554432211 23676655 55666655444322338899988876210 0
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccc
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIY 231 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay 231 (464)
.++.+.+.+.++...... ...++++++|. ||..++.+.+.+|++-+ .++.=|=||+-
T Consensus 119 ------~~s~~~l~~~f~~va~a~-~lPiilYn~P~--tg~~l~~~~~~~La~~~--pnIvgiK~~~~ 175 (309)
T 3fkr_A 119 ------RVPEAQIFEFYARVSDAI-AIPIMVQDAPA--SGTALSAPFLARMAREI--EQVAYFXIETP 175 (309)
T ss_dssp ------CCCHHHHHHHHHHHHHHC-SSCEEEEECGG--GCCCCCHHHHHHHHHHS--TTEEEEEECSS
T ss_pred ------CCCHHHHHHHHHHHHHhc-CCCEEEEeCCC--CCCCCCHHHHHHHHhhC--CCEEEEECCCc
Confidence 012233433333332222 45567888884 89999988877776421 36666665543
No 390
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.59 E-value=2.2e+02 Score=25.82 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCC-hhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPG-FDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~~g~~~~~v~ 162 (464)
.+=|..+.+..-+..+. .-.|+++.|+ .+++.++-.+---.-|.|++..|.|.. .
T Consensus 55 ~~Er~~v~~~~~~~~~g-----r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~---------------- 113 (294)
T 3b4u_A 55 SRERQAILSSFIAAGIA-----PSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNV---------------- 113 (294)
T ss_dssp HHHHHHHHHHHHHTTCC-----GGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSC----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC----------------
Confidence 45566666665543221 1237776664 666666644432233899999998843 1
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCC--ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCC-eEEEEe
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNL--KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKR-IHIVSD 228 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~--~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~-~~lI~D 228 (464)
+.+.+.+.++......+ ...++++++|. .||..++.+.+.+|++- -.+ +.=|=|
T Consensus 114 ---------s~~~l~~~f~~va~a~p~~~lPiilYn~P~-~tg~~l~~~~~~~La~~--~pn~ivgiKd 170 (294)
T 3b4u_A 114 ---------SDDGLFAWFSAVFSKIGKDARDILVYNIPS-VTMVTLSVELVGRLKAA--FPGIVTGVKD 170 (294)
T ss_dssp ---------CHHHHHHHHHHHHHHHCTTCCCEEEEECHH-HHSCCCCHHHHHHHHHH--CTTTEEEEEE
T ss_pred ---------CHHHHHHHHHHHHHhcCCCCCcEEEEECcc-hhCcCCCHHHHHHHHHh--CCCcEEEEEE
Confidence 11233333322221121 34567778774 68999999998888631 234 554544
No 391
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=33.56 E-value=2.4e+02 Score=24.65 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=52.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh-h---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF-D---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|++.|..|++..-.-... . ...... +.++..+..|- -|.+.+++.+++..+.
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDV-----ADFESCERCAEKVLAD 100 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-TCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 456665555544566677888898877754211111 1 111222 55555666542 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.++++.+ +.|.. ...+. ..+.++++++.+.
T Consensus 101 ~g~id~l-i~nAg~~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 3gk3_A 101 FGKVDVL-INNAGITRDATFMKMTKGDWDAVMRT 133 (269)
T ss_dssp HSCCSEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCcCCCcchhhCCHHHHHHHHHH
Confidence 3466644 44442 22222 3466777766653
No 392
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=33.49 E-value=59 Score=28.56 Aligned_cols=99 Identities=9% Similarity=0.076 Sum_probs=50.2
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceE
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVK 191 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 191 (464)
++||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -|.+.+++.+++......+++
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD 76 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNID 76 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCC
Confidence 556655544444555667778888776543211112222222 23455555542 256777777765433334566
Q ss_pred EEEEeCCCC--CCC--CCCCHHHHHHHHHH
Q 037587 192 GVLITNPSN--PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 192 ~vil~~P~N--PtG--~~~s~~~l~~i~~~ 217 (464)
. +++|..- +.+ ...+.++++++.+.
T Consensus 77 ~-lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 77 I-LVNNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp E-EEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred E-EEECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 4 4444431 112 23466777776654
No 393
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.44 E-value=2.2e+02 Score=24.39 Aligned_cols=101 Identities=10% Similarity=0.053 Sum_probs=52.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPY-YPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..-. -...... +... +.++..+..|- -|.+.+++.+++..
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-GGDAAFFAADL-----ATSEACQQLVDEFV 80 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 3457777666555556666777788877765433 2222211 2222 55666666553 25677777776544
Q ss_pred hcCCceEEEEEeCCC--CCCCC--CCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS--NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~--NPtG~--~~s~~~l~~i~~ 216 (464)
....+++.|| .+.. .+.+. ..+.++++++.+
T Consensus 81 ~~~g~id~vi-~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 81 AKFGGIDVLI-NNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HHHSSCSEEE-ECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCcCCcCccccCCHHHHHHHHH
Confidence 3333566544 4332 22222 235555555554
No 394
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=33.25 E-value=95 Score=27.62 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=47.8
Q ss_pred EEEeCChHHHHHHHHHHhcCC-CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 112 LVLTAGSTAANETLMFCLADP-GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~-gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
|+||.|+...=..++..|.+. |..|.+..-.-... ...... +++++..++. |.+.+.++++ ++
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-~~~~~~-~v~~~~~D~~-------d~~~l~~~~~-------~~ 66 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-PDDWRG-KVSVRQLDYF-------NQESMVEAFK-------GM 66 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-CGGGBT-TBEEEECCTT-------CHHHHHHHTT-------TC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-HHhhhC-CCEEEEcCCC-------CHHHHHHHHh-------CC
Confidence 677665433333444446554 66555442211111 111223 6666655432 5778887764 45
Q ss_pred EEEEEeCCC-CCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 191 KGVLITNPS-NPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 191 ~~vil~~P~-NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
..||.+-.. ++.. ......+.+++.|++.++
T Consensus 67 d~vi~~a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 67 DTVVFIPSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp SEEEECCCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 666654331 2111 112456788888888774
No 395
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=32.95 E-value=1.3e+02 Score=27.46 Aligned_cols=58 Identities=10% Similarity=0.146 Sum_probs=40.8
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 21 ~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIEN--GTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34579999999988776544 45566554 445556778999999999887653 456664
No 396
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=32.92 E-value=1.9e+02 Score=26.91 Aligned_cols=91 Identities=11% Similarity=0.105 Sum_probs=53.3
Q ss_pred cEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 111 KLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 111 ~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
-|+++.|+ .+++.++-.+---.-|.|++..|.|... ++.+.+.+.++......
T Consensus 94 pViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~------------------------~s~~~l~~~f~~IA~aa 149 (344)
T 2hmc_A 94 PVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRG------------------------SVIAAQKAHFKAILSAA 149 (344)
T ss_dssp CEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSST------------------------TCHHHHHHHHHHHHHHS
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCC------------------------CCHHHHHHHHHHHHhhC
Confidence 37777664 5666665444221238899999987430 01133333333322201
Q ss_pred CceEEEEEeCCCCCCCCCCCHHHHHHH-HHHHhhCCeEEEEecc
Q 037587 188 LKVKGVLITNPSNPLGTAMTHQELNHL-INFSKSKRIHIVSDEI 230 (464)
Q Consensus 188 ~~~~~vil~~P~NPtG~~~s~~~l~~i-~~~~~~~~~~lI~Dea 230 (464)
....++++++| .||..++.+.+.+| .+ -.++.=|=|..
T Consensus 150 ~~lPiilYn~P--~tg~~l~~e~~~~L~a~---~pnIvGiKdss 188 (344)
T 2hmc_A 150 PEIPAVIYNSP--YYGFATRADLFFALRAE---HKNLVGFKEFG 188 (344)
T ss_dssp TTSCEEEEEBG--GGTBCCCHHHHHHHHHH---CTTEEEEEECS
T ss_pred CCCcEEEEecC--ccCCCcCHHHHHHHHhc---CCCEEEEEcCC
Confidence 24567788888 89999999998888 43 24666565543
No 397
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=32.62 E-value=2.8e+02 Score=25.06 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=49.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
-.|+||.|+...=..+...|++.|..|.+..-.-......+....+++++..++ -|.+.+.++++.. +
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl-------~d~~~~~~~~~~~-----~ 89 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSI-------ADHALVNQLIGDL-----Q 89 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCT-------TCHHHHHHHHHHH-----C
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeC-------CCHHHHHHHHhcc-----C
Confidence 357787665555555556677778777665422111111111111444443332 2567777777542 4
Q ss_pred eEEEEEeCCCCCCCCCCCH-------HHHHHHHHHHhhCCe
Q 037587 190 VKGVLITNPSNPLGTAMTH-------QELNHLINFSKSKRI 223 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~-------~~l~~i~~~~~~~~~ 223 (464)
+.+||-+-.....+ .... .-...+++.|.+.++
T Consensus 90 ~D~vih~A~~~~~~-~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 90 PDAVVHTAASYKDP-DDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CSEEEECCCCCSCT-TCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcEEEECceecCCC-ccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 66655543322221 1100 113467777776653
No 398
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=32.61 E-value=2.5e+02 Score=24.41 Aligned_cols=103 Identities=13% Similarity=0.135 Sum_probs=55.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.++...
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-GFKVEASVCDL-----SSRSERQELMNTVA 81 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34457777776665566667788888887765422111111 11222 55666666553 25677777776554
Q ss_pred hcC-CceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 185 TLN-LKVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~-~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
..- .+++. +++|.. .+.+ ..++.++++++.+.
T Consensus 82 ~~~~g~id~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (260)
T 2ae2_A 82 NHFHGKLNI-LVNNAGIVIYKEAKDYTVEDYSLIMSI 117 (260)
T ss_dssp HHTTTCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCCE-EEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 433 46764 444442 2222 23466677666553
No 399
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=32.38 E-value=2.2e+02 Score=24.85 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=53.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPT-PYYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|++.|..|++.. -.-.... ..+... +.++..+..|- -|.+.+++.+++...
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-GGNGRLLSFDV-----ANREQCREVLEHEIA 100 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 4566766666555666677888898875532 1111111 112223 45556666542 256777777765544
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++.+ ++|.. ...+. ..+.+++++..+.
T Consensus 101 ~~g~id~l-i~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 4iiu_A 101 QHGAWYGV-VSNAGIARDAAFPALSNDDWDAVIHT 134 (267)
T ss_dssp HHCCCSEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCccEE-EECCCCCCCCccccCCHHHHHHHHHH
Confidence 44466644 44442 22221 3466777776653
No 400
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=32.22 E-value=1.7e+02 Score=25.45 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=51.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC----CCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR----PGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~----~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..-.-.......... .+.++..+..|- -|.+.+++.+++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~ 81 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKAR 81 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHHH
Confidence 345777766665555666677788888776543211111111110 022455555542 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
.... ++.+ ++|.. .+.+. .++.+++++..+
T Consensus 82 ~~~g-id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 82 DLGG-ADIL-VYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HTTC-CSEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhcC-CCEE-EECCCCCCCCCcccCCHHHHHHHHH
Confidence 4433 6644 44442 22221 245666666655
No 401
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=32.13 E-value=1.4e+02 Score=27.24 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=22.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPT 140 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~ 140 (464)
....|+||.|+.-.=..++..|++.|..|.+..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~ 56 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLD 56 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 456788887755555556666777787776654
No 402
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=32.09 E-value=35 Score=33.40 Aligned_cols=28 Identities=43% Similarity=0.754 Sum_probs=24.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 199 SNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 199 ~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
++|.|..|+.+++++|++.|+++++-||
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 3567789999999999999999998887
No 403
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=31.88 E-value=1.1e+02 Score=26.93 Aligned_cols=100 Identities=12% Similarity=0.132 Sum_probs=53.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCCh---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGF---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
.++||.|+...=..+...|++.|..|++. .-.-... ...+... +.++..+..|- -|.+.+++.+++..+.
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-GGEAVAIPGDV-----GNAADIAAMFSAVDRQ 101 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-CCcEEEEEcCC-----CCHHHHHHHHHHHHHh
Confidence 45566555554455666778889887654 2221111 1112233 56777777653 2567777777665444
Q ss_pred CCceEEEEEeCCC-CCC-C--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPL-G--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPt-G--~~~s~~~l~~i~~~ 217 (464)
.++++.+ +.|.. ... + .-++.+++++..+.
T Consensus 102 ~g~id~l-i~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 102 FGRLDGL-VNNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp HSCCCEE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCCEE-EECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 3466644 44442 111 2 12466777776654
No 404
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=31.84 E-value=84 Score=28.18 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=52.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---WRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-........ ...+..+..+..|- -|.+.+++.+++..+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDV-----GDPDQVAALFAAVRA 107 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 3346666555544455556677889888776533221111111 11022234455442 256777777766544
Q ss_pred cCCceEEEEEeCCC-C-CCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-N-PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-N-PtG--~~~s~~~l~~i~~~ 217 (464)
...+++. +++|.. . +.+ .-++.++++++.+.
T Consensus 108 ~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~~v 142 (281)
T 4dry_A 108 EFARLDL-LVNNAGSNVPPVPLEEVTFEQWNGIVAA 142 (281)
T ss_dssp HHSCCSE-EEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 4446664 444442 1 212 12567777777664
No 405
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=31.70 E-value=2.4e+02 Score=24.96 Aligned_cols=101 Identities=11% Similarity=0.171 Sum_probs=52.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-h---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPG-F---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|.+.|..|++..-.-.. . ...+... |.++..+..|- -|.+.+++.+++...
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 103 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-GSDAACVKANV-----GVVEDIVRMFEEAVK 103 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-CCCeEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 456666665555456666777889887765322111 1 1112223 55666666552 245666666655433
Q ss_pred cCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.-.+++. +++|.. ...+. -++.++++++.+.
T Consensus 104 ~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 137 (283)
T 1g0o_A 104 IFGKLDI-VCSNSGVVSFGHVKDVTPEEFDRVFTI 137 (283)
T ss_dssp HHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 3335664 444442 22221 2456777666653
No 406
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=31.67 E-value=2e+02 Score=26.70 Aligned_cols=108 Identities=16% Similarity=0.160 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .--|+++.|+ .+++.++-.+---.-|.|++..|.|...
T Consensus 86 ~eEr~~vi~~~ve~~~g-----rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~----------------- 143 (332)
T 2r8w_A 86 REERRRAIEAAATILRG-----RRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPL----------------- 143 (332)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 44555555555443221 1236666554 6666665444321238899999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|.. ||..++.+.+.+|++ -.++.=|=|.
T Consensus 144 --------s~~~l~~~f~~VA~a~-~lPiilYn~P~~-tg~~l~~e~~~~La~---~pnIvgiKds 196 (332)
T 2r8w_A 144 --------TQEEAYHHFAAVAGAT-ALPLAIYNNPTT-TRFTFSDELLVRLAY---IPNIRAIKMP 196 (332)
T ss_dssp --------CHHHHHHHHHHHHHHC-SSCEEEECCHHH-HCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHhc-CCCEEEEeCccc-cCcCCCHHHHHHHHc---CCCEEEEEeC
Confidence 1123333332222111 445677777743 999999999888764 2355555554
No 407
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.55 E-value=1.2e+02 Score=26.99 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=52.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGV---EIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |. ++..+..|- -|.+.+++.+++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS-GVSEKQVNSVVADV-----TTEDGQDQIINST 80 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCGGGEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCCCcceEEEEecC-----CCHHHHHHHHHHH
Confidence 4566766666555566667778888877654321111111 1112 33 555566542 2567777766654
Q ss_pred hhcCCceEEEEEeCCC-CCCC------CCCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-NPLG------TAMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-NPtG------~~~s~~~l~~i~~~ 217 (464)
.....+++. +++|.. .+.+ .-.+.++++++.+.
T Consensus 81 ~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (280)
T 1xkq_A 81 LKQFGKIDV-LVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120 (280)
T ss_dssp HHHHSCCCE-EEECCCCCCCCTTCCCGGGSCHHHHHHHHHH
T ss_pred HHhcCCCCE-EEECCCCCCCCCCCcccccCCHHHHHHHHHH
Confidence 433345664 444442 1111 13456666666553
No 408
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=31.35 E-value=1.8e+02 Score=25.42 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=51.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
...++||.|+...=..+...|++.|..|++..-.-.......... ...++..+..|- -|.+.+++.+++.....
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 90 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTTIAKH 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 345777777666556666777788888776543211111111111 011344555442 25677777766543333
Q ss_pred CceEEEEEeCCCCC---CC--CCCCHHHHHHHHHH
Q 037587 188 LKVKGVLITNPSNP---LG--TAMTHQELNHLINF 217 (464)
Q Consensus 188 ~~~~~vil~~P~NP---tG--~~~s~~~l~~i~~~ 217 (464)
.+++.+| .|.... .+ ...+.+++++..+.
T Consensus 91 ~~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 124 (278)
T 2bgk_A 91 GKLDIMF-GNVGVLSTTPYSILEAGNEDFKRVMDI 124 (278)
T ss_dssp SCCCEEE-ECCCCCCSSCSSTTTCCHHHHHHHHHH
T ss_pred CCCCEEE-ECCcccCCCCCChhhCCHHHHHHHHHH
Confidence 4566544 444211 11 22455666666553
No 409
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=31.34 E-value=1.7e+02 Score=25.50 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=54.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcc---cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLK---WRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-........ ...+.++..+..|-.. -|.+.+++.+++...
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIAV 88 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHHH
Confidence 3456777766655556666788889888776533221111111 1102233444443211 256777777766555
Q ss_pred cCCceEEEEEeCCC--CCCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS--NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~--NPtG--~~~s~~~l~~i~~~ 217 (464)
..++++.+ ++|.. .+.+ ...+.++++++.+.
T Consensus 89 ~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 89 NYPRLDGV-LHNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp HCSCCSEE-EECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred hCCCCCEE-EECCccCCCCCCcccCCHHHHHHHHhh
Confidence 55567754 44442 2222 23567777776664
No 410
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=31.15 E-value=2.2e+02 Score=24.33 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=19.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-CeEEEc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPG-DAFLLP 139 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~ 139 (464)
..|+||.|+...=..+...|+..| ..|.+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~ 54 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLF 54 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEE
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEE
Confidence 357777766555566667788888 466554
No 411
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.07 E-value=2.3e+02 Score=25.23 Aligned_cols=102 Identities=10% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|++..=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++....
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-GGEAAALAGDV-----GDEALHEALVELAVR 81 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-TCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 33466666665555566667888898888765332211111 2222 55666666553 256777777665544
Q ss_pred cCCceEEEEEeCCC--CCCCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS--NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~--NPtG~--~~s~~~l~~i~~~ 217 (464)
...+++. +++|.. .+.+. ..+.++++++.+.
T Consensus 82 ~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 82 RFGGLDT-AFNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp HHSCCCE-EEECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 4346664 444442 12222 3567777777664
No 412
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=31.06 E-value=3e+02 Score=24.85 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=39.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.-.|+||.|+...=..+...|++.|..|.+..-.-...........++.++..++ -|.+.+.+++++.
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl-------~d~~~~~~~~~~~----- 87 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSV-------TDAGLLERAFDSF----- 87 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCT-------TCHHHHHHHHHHH-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeC-------CCHHHHHHHHhhc-----
Confidence 3457787765555555666777788777665432111111111112444443332 2567788777643
Q ss_pred ceEEEEEe
Q 037587 189 KVKGVLIT 196 (464)
Q Consensus 189 ~~~~vil~ 196 (464)
++++||-+
T Consensus 88 ~~D~vih~ 95 (330)
T 2pzm_A 88 KPTHVVHS 95 (330)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 45655544
No 413
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=30.91 E-value=1.6e+02 Score=25.80 Aligned_cols=103 Identities=14% Similarity=0.189 Sum_probs=54.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-..... .+... |.++..+..|- -|.+.+++.+++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 79 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-GVEARSYVCDV-----TSEEAVIGTVDSVV 79 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHH
Confidence 33457777776665566667788888887765422111111 12222 55666666553 25677776666544
Q ss_pred hcCCceEEEEEeCCC-C-CCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-N-PLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-N-PtG~--~~s~~~l~~i~~~ 217 (464)
..-.+++. +++|.. . +.+. -++.++++++.+.
T Consensus 80 ~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 115 (262)
T 1zem_A 80 RDFGKIDF-LFNNAGYQGAFAPVQDYPSDDFARVLTI 115 (262)
T ss_dssp HHHSCCCE-EEECCCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHhCCCCE-EEECCCCCCCCCccccCCHHHHHHHHHH
Confidence 33345664 444442 2 2221 2466677666653
No 414
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.62 E-value=1.5e+02 Score=27.12 Aligned_cols=57 Identities=11% Similarity=0.069 Sum_probs=39.9
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 26 ~dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 26 INGNIDFAKTTKLVNYLIDN--GTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 34679999999988876544 45666654 344455678999999999888653 35555
No 415
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.58 E-value=1.4e+02 Score=27.05 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=40.1
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 15 ~dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 15 KDGGVDWKSLEKLVEWHIEQ--GTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TTSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 34579999999888765544 45566554 345555678999999999887663 355554
No 416
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=30.34 E-value=2.7e+02 Score=24.09 Aligned_cols=90 Identities=8% Similarity=0.052 Sum_probs=49.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCce
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKV 190 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~ 190 (464)
.++||.|+...=..+...|.+.|..|++..-.-.. . ... .+.++ --|.+.+++.+++......++
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~-------~-~~~--~~~~d-----~~d~~~v~~~~~~~~~~~g~i 88 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP-------N-ADH--SFTIK-----DSGEEEIKSVIEKINSKSIKV 88 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------T-SSE--EEECS-----CSSHHHHHHHHHHHHTTTCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc-------c-ccc--ceEEE-----eCCHHHHHHHHHHHHHHcCCC
Confidence 46777666655566667788889887776532211 1 112 22322 136788888887765555677
Q ss_pred EEEEEeCCC-CCCC---CCCCHHHHHHHHH
Q 037587 191 KGVLITNPS-NPLG---TAMTHQELNHLIN 216 (464)
Q Consensus 191 ~~vil~~P~-NPtG---~~~s~~~l~~i~~ 216 (464)
+.+| .|.. .+.+ ...+.+++++..+
T Consensus 89 D~li-~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (251)
T 3orf_A 89 DTFV-CAAGGWSGGNASSDEFLKSVKGMID 117 (251)
T ss_dssp EEEE-ECCCCCCCBCTTSTTHHHHHHHHHH
T ss_pred CEEE-ECCccCCCCCcccccCHHHHHHHHH
Confidence 7544 4442 2222 2344555555444
No 417
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.31 E-value=1.4e+02 Score=27.02 Aligned_cols=56 Identities=9% Similarity=0.145 Sum_probs=39.0
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 16 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVAS--GTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVI 74 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHH--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4579999999988765544 45555554 345555678999999999887653 35555
No 418
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.30 E-value=1.1e+02 Score=27.55 Aligned_cols=102 Identities=12% Similarity=0.132 Sum_probs=53.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCc---EEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGV---EIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |. ++..+..|- -|.+.+++.+++
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 99 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADV-----TEASGQDDIINT 99 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCC-----CCHHHHHHHHHH
Confidence 34567776666555566677888898877754321111111 1112 33 555566542 256777776665
Q ss_pred HhhcCCceEEEEEeCCC-CCCCC----CCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPS-NPLGT----AMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~-NPtG~----~~s~~~l~~i~~~ 217 (464)
......+++. +++|.. .+.+. ..+.++++++.+.
T Consensus 100 ~~~~~g~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~~~v 138 (297)
T 1xhl_A 100 TLAKFGKIDI-LVNNAGANLADGTANTDQPVELYQKTFKL 138 (297)
T ss_dssp HHHHHSCCCE-EEECCCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred HHHhcCCCCE-EEECCCcCcCCCCccccCCHHHHHHHHhH
Confidence 4433346664 444442 22221 3466777766654
No 419
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=30.11 E-value=85 Score=28.79 Aligned_cols=27 Identities=7% Similarity=0.052 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHhhCCeEEEEecccc
Q 037587 206 MTHQELNHLINFSKSKRIHIVSDEIYS 232 (464)
Q Consensus 206 ~s~~~l~~i~~~~~~~~~~lI~Deay~ 232 (464)
.+.++.++++++++++|+.+.+-..+.
T Consensus 107 ~~~~ea~~l~~~a~~~g~~~~v~~~~R 133 (312)
T 3o9z_A 107 LWPEEIARLKELEARTGRRVYTVLQLR 133 (312)
T ss_dssp SCHHHHHHHHHHHHHHCCCEEECCGGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeehh
Confidence 577999999999999998877654443
No 420
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.02 E-value=1.3e+02 Score=27.70 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=54.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCC--hhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPG--FDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~--~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
..|+||.|+...=..++..|++.|..|.+. ...-.. -.. ..... +++++..++. |.+.+.+++++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~-~v~~~~~Dl~-------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDK-GAIIVYGLIN-------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHT-TCEEEECCTT-------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhC-CcEEEEeecC-------CHHHHHHHHhhC
Confidence 468887774444444555666666554433 221111 111 11223 7777665543 678888888642
Q ss_pred hhcCCceEEEEEeCC-CCCCCCCCCHHHHHHHHHHHhhCC-eEEEEecccc
Q 037587 184 QTLNLKVKGVLITNP-SNPLGTAMTHQELNHLINFSKSKR-IHIVSDEIYS 232 (464)
Q Consensus 184 ~~~~~~~~~vil~~P-~NPtG~~~s~~~l~~i~~~~~~~~-~~lI~Deay~ 232 (464)
++..||.+-. .|..| -..+++.|++.+ +..++=..|.
T Consensus 83 -----~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~v~S~~g 121 (346)
T 3i6i_A 83 -----EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRFLPSEFG 121 (346)
T ss_dssp -----TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEEECSCCS
T ss_pred -----CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEEeecccC
Confidence 4565655433 23333 357888888777 5444323443
No 421
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.87 E-value=1.3e+02 Score=27.59 Aligned_cols=58 Identities=7% Similarity=0.058 Sum_probs=41.4
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC--CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK--RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~--~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 22 ~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEV--GCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHC--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 35679999999998876554 45566554 334455679999999999988664 466664
No 422
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=29.75 E-value=1.4e+02 Score=26.12 Aligned_cols=101 Identities=14% Similarity=0.132 Sum_probs=50.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTP-YYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..- .-.... ..+... |.++..+..|- -|.+.+++.+++..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-GAQGVAIQADI-----SKPSEVVALFDKAV 94 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCcEEEEEecC-----CCHHHHHHHHHHHH
Confidence 345677666555445566677778887776532 111111 112222 55566666542 25667777666543
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~ 216 (464)
..-.+++.++ .+.. .+.+. ..+.+++++..+
T Consensus 95 ~~~~~~d~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 95 SHFGGLDFVM-SNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHHSCEEEEE-CCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCcccccCCHHHHHHHHH
Confidence 3333566444 3332 22221 245556655554
No 423
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=29.49 E-value=1.9e+02 Score=22.23 Aligned_cols=79 Identities=9% Similarity=0.066 Sum_probs=46.6
Q ss_pred CCCeEEEcCCCCCChhhhcccCCCc---EEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCH
Q 037587 132 PGDAFLLPTPYYPGFDRDLKWRPGV---EIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH 208 (464)
Q Consensus 132 ~gd~Vlv~~p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~ 208 (464)
.+..|+...|.+..+....... |+ +++.+..... .-.+..+|++++. ....+ |+..+. .++.
T Consensus 32 ~~r~ilwi~pp~~~~~~~L~~~-Gl~~~rll~v~~~~~---~d~lwa~EqaLrs-----g~~~a-Vl~wl~-----~l~~ 96 (119)
T 1ofu_X 32 DARWLTLIAPPASLTHEWLRRA-GLNRERILLLQAKDN---AAALALSCEALRL-----GRSHT-VVSWLE-----PLSR 96 (119)
T ss_dssp SSSEEEEESCCTTSCHHHHHHT-TCCTTSEEEECCSSH---HHHHHHHHHHHHH-----TCEEE-EEECCS-----SCCH
T ss_pred cCccEEEECCCCCCCHHHHHHc-CCChHHEEEEECCCc---HHHHHHHHHHHhc-----CCccE-EEECCC-----cCCh
Confidence 4556666677676677766655 65 4666654311 1125667777765 24444 444432 2677
Q ss_pred HHHHHHHHHHhhCCeEE
Q 037587 209 QELNHLINFSKSKRIHI 225 (464)
Q Consensus 209 ~~l~~i~~~~~~~~~~l 225 (464)
.+.+++--.|++.+...
T Consensus 97 ~~~RRLqlAA~~g~~~~ 113 (119)
T 1ofu_X 97 AARKQLSRAAQLGQAQS 113 (119)
T ss_dssp HHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHhCCCeE
Confidence 88888887777665543
No 424
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.35 E-value=2.6e+02 Score=23.70 Aligned_cols=101 Identities=7% Similarity=-0.001 Sum_probs=50.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANETLMFCLADPG--DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.++||.|+...=..+...|++.| ..|++..-.-.......... +.++..+..|- -|.+.+++.+++......
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTV-----TCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCT-----TCHHHHHHHHHHHHHHHG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhcc-CCceEEEEeec-----CCHHHHHHHHHHHHHhcC
Confidence 46777666555556667788888 77766543222111111111 33455555542 245667666665433222
Q ss_pred --ceEEEEEeCCCCC-CC--CCCCHHHHHHHHHH
Q 037587 189 --KVKGVLITNPSNP-LG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 --~~~~vil~~P~NP-tG--~~~s~~~l~~i~~~ 217 (464)
+++.||.+--..+ .+ ...+.+++++..+.
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDV 112 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHH
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHHH
Confidence 5665444322121 22 22456666666553
No 425
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=28.75 E-value=2.8e+02 Score=24.34 Aligned_cols=103 Identities=11% Similarity=0.087 Sum_probs=51.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... .+.++..+..|- -|.+.+++.++...
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFSAIR 106 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHH
Confidence 34577776665555566667777888877654321111111 1111 023455555542 25677777666543
Q ss_pred hcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
....+++.|| .+.. .+.+. ..+.++++++.+.
T Consensus 107 ~~~g~iD~vi-~~Ag~~~~~~~~~~~~~~~~~~~~~ 141 (279)
T 1xg5_A 107 SQHSGVDICI-NNAGLARPDTLLSGSTSGWKDMFNV 141 (279)
T ss_dssp HHHCCCSEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HhCCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3333566544 4442 22222 2355666665543
No 426
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=28.65 E-value=88 Score=27.22 Aligned_cols=109 Identities=12% Similarity=0.082 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCCh---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEE
Q 037587 118 STAANETLMFCLADPGDAFLLPTPYYPGF---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVL 194 (464)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vi 194 (464)
+++++..+.+ +...|.++++..|.-..- ....... |.....+++... +++.+.+. .+...|+
T Consensus 42 TT~Llr~~~r-~~~~g~kvli~kp~~D~R~~~~~I~Sr~-G~~~~a~~v~~~-------~di~~~i~------~~~dvV~ 106 (219)
T 3e2i_A 42 SEELIRRLRR-GIYAKQKVVVFKPAIDDRYHKEKVVSHN-GNAIEAINISKA-------SEIMTHDL------TNVDVIG 106 (219)
T ss_dssp HHHHHHHHHH-HHHTTCCEEEEEEC-----------CBT-TBCCEEEEESSG-------GGGGGSCC------TTCSEEE
T ss_pred HHHHHHHHHH-HHHcCCceEEEEeccCCcchhhhHHHhc-CCceeeEEeCCH-------HHHHHHHh------cCCCEEE
Confidence 3556666544 445677888887764322 1223333 665555554321 22222111 1566677
Q ss_pred EeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 195 ITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 195 l~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
+.-. +.++.+.++.+.+++ ..|+.||+=.--.+ |.+. .|.....+++
T Consensus 107 IDEa-----QFf~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~--~F~~~~~Ll~ 153 (219)
T 3e2i_A 107 IDEV-----QFFDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGE--PFEPMPKLMA 153 (219)
T ss_dssp ECCG-----GGSCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSC--BCTTHHHHHH
T ss_pred Eech-----hcCCHHHHHHHHHHH-HCCCEEEEeecccc--cccC--CCccHHHHHH
Confidence 7644 447767777777777 57888887554443 5555 5666665554
No 427
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.64 E-value=85 Score=23.34 Aligned_cols=59 Identities=10% Similarity=0.151 Sum_probs=36.8
Q ss_pred cccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCH-HHHHHHHHHHhhCCeE-EEEecccc
Q 037587 169 FRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTH-QELNHLINFSKSKRIH-IVSDEIYS 232 (464)
Q Consensus 169 ~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~-~~l~~i~~~~~~~~~~-lI~Deay~ 232 (464)
+..+.+.+.+.+++. ++..+++--|-|..|..-+. +..+++++..++.++. ..+||-+.
T Consensus 36 ~~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 36 LEEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred cHHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 345678888888775 78889999997776654332 2344444443332544 46888664
No 428
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.48 E-value=1.8e+02 Score=25.69 Aligned_cols=82 Identities=10% Similarity=0.075 Sum_probs=42.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---c---ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---L---KWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
..++||.|+...=..+...|.+.|..|++..-.-...... + ... +.++..+..|- -|.+.+++.+++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~ 80 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVS-EQNVNSVVADV-----TTDAGQDEILSTT 80 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccC-CCceeEEeccc-----CCHHHHHHHHHHH
Confidence 3466666655544556667778888877654221111111 1 112 44555566542 2567777766654
Q ss_pred hhcCCceEEEEEeCC
Q 037587 184 QTLNLKVKGVLITNP 198 (464)
Q Consensus 184 ~~~~~~~~~vil~~P 198 (464)
.....+++. +++|.
T Consensus 81 ~~~~g~id~-lv~~A 94 (278)
T 1spx_A 81 LGKFGKLDI-LVNNA 94 (278)
T ss_dssp HHHHSCCCE-EEECC
T ss_pred HHHcCCCCE-EEECC
Confidence 433345664 44444
No 429
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=28.30 E-value=2.5e+02 Score=24.43 Aligned_cols=80 Identities=8% Similarity=0.176 Sum_probs=39.9
Q ss_pred CcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---c-ccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 110 NKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPGFDRD---L-KWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 110 ~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
..++||.|+ ...=..+...|.+.|..|++..-.-. .... + ... +. ...+..|- -|.+.+++.+++.
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-~~-~~~~~~D~-----~~~~~v~~~~~~~ 81 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQL-GS-DIVLQCDV-----AEDASIDTMFAEL 81 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHT-TC-CCEEECCT-----TCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHHhc-CC-cEEEEccC-----CCHHHHHHHHHHH
Confidence 346777665 33334455567778887776532211 1111 1 111 21 13344332 2567777777765
Q ss_pred hhcCCceEEEEEeCC
Q 037587 184 QTLNLKVKGVLITNP 198 (464)
Q Consensus 184 ~~~~~~~~~vil~~P 198 (464)
.....+++. +++|.
T Consensus 82 ~~~~g~iD~-lv~~A 95 (265)
T 1qsg_A 82 GKVWPKFDG-FVHSI 95 (265)
T ss_dssp HTTCSSEEE-EEECC
T ss_pred HHHcCCCCE-EEECC
Confidence 544456764 44444
No 430
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=28.27 E-value=34 Score=33.38 Aligned_cols=27 Identities=33% Similarity=0.701 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 200 NPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 200 NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+|.|..|+.+++++|++.|+++|+-||
T Consensus 83 ~~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 83 DPNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp CTTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 466778999999999999999998887
No 431
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=28.21 E-value=2.2e+02 Score=24.91 Aligned_cols=101 Identities=8% Similarity=0.052 Sum_probs=50.3
Q ss_pred CcEEEeCC--hHHHHHHHHHHhcCCCCeEEEcCCCCCC-hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAG--STAANETLMFCLADPGDAFLLPTPYYPG-FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G--~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.| +...=..+...|.+.|..|++..-.-.. ........ +.++..+..|- -|.+.+++.+++..+.
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDV-----QNEEHLASLAGRVTEA 81 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccC-----CCHHHHHHHHHHHHHH
Confidence 34667665 3333345555677788887765432211 12222223 44444455442 2567777777655433
Q ss_pred CC---ceEEEEEeCCCC-C-----CC--CCCCHHHHHHHHHH
Q 037587 187 NL---KVKGVLITNPSN-P-----LG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~---~~~~vil~~P~N-P-----tG--~~~s~~~l~~i~~~ 217 (464)
.. +++. +++|... + .+ .-.+.+++++..+.
T Consensus 82 ~g~~~~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (269)
T 2h7i_A 82 IGAGNKLDG-VVHSIGFMPQTGMGINPFFDAPYADVSKGIHI 122 (269)
T ss_dssp HCTTCCEEE-EEECCCCCCGGGSTTSCGGGCCHHHHHHHHHH
T ss_pred hCCCCCceE-EEECCccCccccccccccccCCHHHHHHHHHH
Confidence 33 5664 4444421 1 11 12466666666553
No 432
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=28.19 E-value=1.2e+02 Score=19.20 Aligned_cols=31 Identities=10% Similarity=-0.030 Sum_probs=26.4
Q ss_pred eEEEEeecCCHHHHHHHHHHHHHHHHhhCcc
Q 037587 405 WFRICFANITEETLQVALQRIKVFAQSCNPQ 435 (464)
Q Consensus 405 ~~Ris~~~~~~e~l~~~l~~l~~~l~~~~~~ 435 (464)
.+|||+...++.+-+.+...|-+++.+..+.
T Consensus 3 rvrisitartkkeaekfaailikvfaelgyn 33 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAELGYN 33 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHhCcc
Confidence 5899998778889999999999998888753
No 433
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=27.94 E-value=2e+02 Score=24.59 Aligned_cols=98 Identities=16% Similarity=0.124 Sum_probs=49.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+....++||.|+...=..+...|.+.|..|++..-.-...........+.+++..++ -|.+.+++.++.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~---- 73 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGG---- 73 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTT----
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHH----
Confidence 344467787776665566667777888887765432211222222122555553332 256777776642
Q ss_pred CCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 187 NLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 187 ~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
..+++.|+ .+.. .+.+ ...+.+++++..+
T Consensus 74 ~~~id~vi-~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 1cyd_A 74 IGPVDLLV-NNAALVIMQPFLEVTKEAFDRSFS 105 (244)
T ss_dssp CCCCSEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEE-ECCcccCCCCcccCCHHHHHHHHh
Confidence 22456444 4432 2222 1245566655554
No 434
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=27.86 E-value=2.2e+02 Score=24.32 Aligned_cols=98 Identities=13% Similarity=0.160 Sum_probs=50.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
++||.|+...=..+...|.+.|..|++. .-.-..... .+... +.++..+..|- -|.+.+++.+++.....
T Consensus 4 vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-GGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-TCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 5666555554455666677788887763 322111111 11222 44666666552 25677777776654444
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.+++.+| .+.. .+.+ ...+.+++++..+
T Consensus 78 g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVV-NNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEE-ECCCCCCCcCcccCCHHHHHHHHH
Confidence 4666544 4442 2222 1245566665554
No 435
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=27.85 E-value=3.1e+02 Score=24.03 Aligned_cols=101 Identities=6% Similarity=-0.014 Sum_probs=50.5
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
...++||.|+ ...=..+...|.+.|..|++..-.-.. ........ + .+..+..|- -|.+.+++.+++.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~-~~~~~~~D~-----~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL-N-SPYVYELDV-----SKEEHFKSLYNSV 78 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT-T-CCCEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEcCC-----CCHHHHHHHHHHH
Confidence 3457777765 444445556677889887765432210 11111112 2 133344432 2567777777665
Q ss_pred hhcCCceEEEEEeCCCC-CC----CC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPSN-PL----GT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~N-Pt----G~--~~s~~~l~~i~~~ 217 (464)
.....+++. +++|..- +. +. ..+.+++++..+.
T Consensus 79 ~~~~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (275)
T 2pd4_A 79 KKDLGSLDF-IVHSVAFAPKEALEGSLLETSKSAFNTAMEI 118 (275)
T ss_dssp HHHTSCEEE-EEECCCCCCGGGGSSCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCccCccccCCCCcccCCHHHHHHHHHH
Confidence 444456774 4444421 11 11 3456666666553
No 436
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=27.84 E-value=1.3e+02 Score=27.60 Aligned_cols=58 Identities=16% Similarity=0.263 Sum_probs=37.4
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 21 ~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 21 EDGSINFDAIPALIEHLLAH--HTDGILLA-GTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TTSSBCTTHHHHHHHHHHHT--TCCCEEES-STTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34568888888888765443 44555544 344455678888888888887653 345554
No 437
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.44 E-value=1.5e+02 Score=26.79 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=39.0
Q ss_pred CcccCHHHHHHHHHHHhh-cCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 168 GFRITISALENAYQQAQT-LNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~-~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
+..+|.+.+++.++.... . .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 18 dg~iD~~~l~~lv~~li~~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 77 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKM--KVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 77 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCCcCHHHHHHHHHHHHhhC--CCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 457999999998887655 4 45555554 334445678999999999887653 35555
No 438
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=27.30 E-value=1.6e+02 Score=25.76 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=50.4
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 112 LVLTAGSTAANETLMFCLADP--GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
++||.|+...=..+...|.+. |..|+...-.-.......... |.++..+..|- -|.+.+++.+++..+...+
T Consensus 5 ~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~ 78 (254)
T 3kzv_A 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDI-----TEDSVLKQLVNAAVKGHGK 78 (254)
T ss_dssp EEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred EEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCC-----CCHHHHHHHHHHHHHhcCC
Confidence 455555544334444556554 456655433222222222333 55666666553 2567777777665444446
Q ss_pred eEEEEEeCCC--CCCCC--CCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS--NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~--NPtG~--~~s~~~l~~i~~~ 217 (464)
++.+ ++|.. .+.+. .++.+++++..+.
T Consensus 79 id~l-vnnAg~~~~~~~~~~~~~~~~~~~~~~ 109 (254)
T 3kzv_A 79 IDSL-VANAGVLEPVQNVNEIDVNAWKKLYDI 109 (254)
T ss_dssp CCEE-EEECCCCCCCTTTTSCCHHHHHHHHHH
T ss_pred ccEE-EECCcccCCCCCcccCCHHHHHHHHHH
Confidence 7754 44442 22222 3567777777664
No 439
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=27.25 E-value=39 Score=33.10 Aligned_cols=28 Identities=11% Similarity=0.273 Sum_probs=25.2
Q ss_pred CHHHHHHHHHHHhhCCeEEEEecccccc
Q 037587 207 THQELNHLINFSKSKRIHIVSDEIYSGT 234 (464)
Q Consensus 207 s~~~l~~i~~~~~~~~~~lI~Deay~~~ 234 (464)
+.++++++++.|+++|+-||+|-|+-+.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 5699999999999999999999988653
No 440
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=27.23 E-value=1.3e+02 Score=27.69 Aligned_cols=58 Identities=10% Similarity=0.106 Sum_probs=39.1
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 37 ~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 37 AQGRLDWDSLAKLVDFHLQE--GTNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TTSCBCHHHHHHHHHHHHHH--TCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34578999998888765444 45555554 344455678999999999887653 355554
No 441
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=27.00 E-value=1.6e+02 Score=26.76 Aligned_cols=108 Identities=18% Similarity=0.227 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+. .-.|+++.|+ .+++.++-.+---.-|.|++..|.|....
T Consensus 56 ~~Er~~v~~~~~~~~~g-----rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~---------------- 114 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAKD-----QIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFS---------------- 114 (293)
T ss_dssp HHHHHHHHHHHHHHHTT-----SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCC----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCC----------------
Confidence 45555555555443221 1237777665 66666654442212388999999884311
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ -.++.=|=|.
T Consensus 115 ---------~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiK~s 166 (293)
T 1f6k_A 115 ---------FPEIKHYYDTIIAET-GSNMIVYSIPF-LTGVNMGIEQFGELYK---NPKVLGVKFT 166 (293)
T ss_dssp ---------HHHHHHHHHHHHHHH-CCCEEEEECHH-HHCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred ---------HHHHHHHHHHHHHhC-CCCEEEEECcc-ccCcCCCHHHHHHHhc---CCCEEEEEEC
Confidence 122222222211111 34567778774 5899999998888764 2355555554
No 442
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=26.93 E-value=2.1e+02 Score=24.42 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=48.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....++||.|+...=..+...|.+.|..|++..-.-...........+.+++..++ -|.+.+++.++. .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~----~ 74 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGS----V 74 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTT----C
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHH----c
Confidence 34467777776665556666777788887765432111122222222555543332 256777776642 1
Q ss_pred CceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 188 LKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 188 ~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.+++.| +.+.. ...+ ...+.+++++..+
T Consensus 75 ~~id~v-i~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 3d3w_A 75 GPVDLL-VNNAAVALLQPFLEVTKEAFDRSFE 105 (244)
T ss_dssp CCCCEE-EECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEE-EECCccCCCcchhhCCHHHHHHHHH
Confidence 245644 44442 2111 1235556655554
No 443
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=26.70 E-value=1.3e+02 Score=27.38 Aligned_cols=57 Identities=9% Similarity=0.179 Sum_probs=40.8
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC----CeEEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK----RIHIVS 227 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~----~~~lI~ 227 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 22 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIEN--GIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHT--TCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4579999999988876544 45565554 345555678999999999988664 466664
No 444
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=26.68 E-value=1.8e+02 Score=26.35 Aligned_cols=51 Identities=14% Similarity=0.226 Sum_probs=36.6
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEK--GIDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHT--TCCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999888765544 45555554 344455678999999999988764
No 445
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=26.57 E-value=1.7e+02 Score=25.44 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChh---hhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTP-YYPGFD---RDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~---~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|+...=..+...|++.|..|++..- .-.... ..+... +.++..+..|- -|.+.+.+.+++..
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-GGEAIAVKGDV-----TVESDVINLVQSAI 80 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEECCC-----CCHHHHHHHHHHHH
Confidence 345677766655555666677778888776542 111111 112222 55666666553 24667766666543
Q ss_pred hcCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
....+++.|| .+.. .+.+ ...+.+++++..+
T Consensus 81 ~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 81 KEFGKLDVMI-NNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HHHSCCCEEE-ECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHH
Confidence 3333566544 4432 2222 1245566666554
No 446
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=26.56 E-value=1.8e+02 Score=26.32 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=36.9
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRK--GIDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 4578999999888766544 45555554 345555678999999999988764
No 447
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=26.54 E-value=1.7e+02 Score=25.68 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=45.1
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 112 LVLTAGSTAANETLMFCLADP--GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
|+||.|+...=..+...|++. |..|.+..-.-..... .... +++++..++. |.+.+.++++ +
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~-~~~~~~~D~~-------d~~~~~~~~~-------~ 65 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQ-GITVRQADYG-------DEAALTSALQ-------G 65 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcC-CCeEEEcCCC-------CHHHHHHHHh-------C
Confidence 667766444445555667665 7666554322111111 1223 5565544332 5677777664 4
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
++.|+.+-...+... ..-.+.+++.|.+.++
T Consensus 66 ~d~vi~~a~~~~~~~---~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 66 VEKLLLISSSEVGQR---APQHRNVINAAKAAGV 96 (286)
T ss_dssp CSEEEECC-----------CHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCCchHH---HHHHHHHHHHHHHcCC
Confidence 565655433222111 1345677777776653
No 448
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=26.49 E-value=1.6e+02 Score=27.25 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=37.2
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 49 dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAA--EVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHH--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4578888888887765444 45555554 334445568888888888877653 355554
No 449
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=26.39 E-value=3.8e+02 Score=24.52 Aligned_cols=109 Identities=21% Similarity=0.224 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEec
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAG---STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHC 163 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G---~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~ 163 (464)
.+=|..+.+..-+..+.+ -.|+++.| ..+++.++-.+---.-|.|++..|.|...
T Consensus 74 ~~Er~~v~~~~v~~~~gr-----vpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~----------------- 131 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAKR-----VPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRP----------------- 131 (315)
T ss_dssp HHHHHHHHHHHHHHHTTS-----SCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-----------------
T ss_pred HHHHHHHHHHHHHHhCCC-----CcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-----------------
Confidence 455555666554433222 23666655 45555555444322338999999987421
Q ss_pred CCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 164 SSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 164 ~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++- -.++.=|=|.
T Consensus 132 --------~~~~l~~~f~~va~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~~--~pnIvgiKds 185 (315)
T 3si9_A 132 --------NQRGLYTHFSSIAKAI-SIPIIIYNIPS-RSVIDMAVETMRDLCRD--FKNIIGVKDA 185 (315)
T ss_dssp --------CHHHHHHHHHHHHHHC-SSCEEEEECHH-HHSCCCCHHHHHHHHHH--CTTEEEEEEC
T ss_pred --------CHHHHHHHHHHHHHcC-CCCEEEEeCch-hhCCCCCHHHHHHHHhh--CCCEEEEEeC
Confidence 1122222222221111 45567888774 58999998887777641 1366556554
No 450
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=26.19 E-value=2.5e+02 Score=24.31 Aligned_cols=101 Identities=15% Similarity=0.075 Sum_probs=52.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGF----DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
..++||.|+...=..+...|.+.|..|++..-.-... ....... +.++..+..|- -|.+.+++.+++...
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADV-----TKKEDLHKIVEEAMS 81 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 3466666655555566667888888877652211111 1112222 44566666553 256777777766544
Q ss_pred cCCceEEEEEeCCC--C-CCC--CCCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS--N-PLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~--N-PtG--~~~s~~~l~~i~~~ 217 (464)
..++++. ++.|.. . +.+ .-.+.+++++..+.
T Consensus 82 ~~g~id~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 117 (264)
T 3i4f_A 82 HFGKIDF-LINNAGPYVFERKKLVDYEEDEWNEMIQG 117 (264)
T ss_dssp HHSCCCE-EECCCCCCCCSCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCCE-EEECCcccccCCCccccCCHHHHHHHHHh
Confidence 4346664 444443 1 111 22466666666553
No 451
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=26.14 E-value=3.3e+02 Score=23.80 Aligned_cols=106 Identities=8% Similarity=-0.047 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCCh--hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEe
Q 037587 119 TAANETLMFCLADPGDAFLLPTPYYPGF--DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLIT 196 (464)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~ 196 (464)
++++..+.++. ..|.+|++..|.-..- ....... |.++..+++.. .+++.+.+ .+..+|++.
T Consensus 34 T~lL~~~~r~~-~~g~kvli~kp~~D~Ryg~~i~sr~-G~~~~a~~i~~-------~~di~~~~-------~~~dvViID 97 (234)
T 2orv_A 34 TELMRRVRRFQ-IAQYKCLVIKYAKDTRYSSSFCTHD-RNTMEALPACL-------LRDVAQEA-------LGVAVIGID 97 (234)
T ss_dssp HHHHHHHHHHH-TTTCCEEEEEETTCCCC------------CEEEEESS-------GGGGHHHH-------TTCSEEEES
T ss_pred HHHHHHHHHHH-HCCCeEEEEeecCCccchHHHHhhc-CCeeEEEecCC-------HHHHHHHh-------ccCCEEEEE
Confidence 57777776654 5788888877664311 2333333 66655555431 12232222 156778887
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccccccCCCCCCccchhhhhh
Q 037587 197 NPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPSSSFISIMEAVM 251 (464)
Q Consensus 197 ~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~~~~~~~~~~~~~~~~l~~ 251 (464)
-.+.-++ +.++++++...|+.||+=.-..+ |.+. .|.....+++
T Consensus 98 EaQF~~~-------v~el~~~l~~~gi~VI~~GL~~D--F~~~--~F~~~~~Ll~ 141 (234)
T 2orv_A 98 EGQFFPD-------IVEFCEAMANAGKTVIVAALDGT--FQRK--PFGAILNLVP 141 (234)
T ss_dssp SGGGCTT-------HHHHHHHHHHTTCEEEEECCSBC--TTSS--BCTTGGGGGG
T ss_pred chhhhhh-------HHHHHHHHHhCCCEEEEEecccc--cccC--CcccHHHHHH
Confidence 6655442 56666666678899998766655 5555 5555555544
No 452
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=26.13 E-value=1.5e+02 Score=26.63 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=50.8
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhcCCCCeEEEcCCCCCCh---hhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 108 DPNKLVLTAGST--AANETLMFCLADPGDAFLLPTPYYPGF---DRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 108 ~~~~i~it~G~~--~al~~~~~~l~~~gd~Vlv~~p~y~~~---~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
....++||.|++ ..=..+...|++.|..|++..-.-... ....... + .+..+..|- -|.+.+++.+++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~-~~~~~~~Dv-----~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-G-VKLTVPCDV-----SDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-T-CCEEEECCT-----TCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-C-CeEEEEcCC-----CCHHHHHHHHHH
Confidence 344577777653 333344556777888887764331111 1111222 2 134445442 256777777766
Q ss_pred HhhcCCceEEEEEeCCCCCC-----C--CCCCHHHHHHHHHH
Q 037587 183 AQTLNLKVKGVLITNPSNPL-----G--TAMTHQELNHLINF 217 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P~NPt-----G--~~~s~~~l~~i~~~ 217 (464)
......+++. +++|..-.. + .-.+.+++++..+.
T Consensus 102 ~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~v 142 (296)
T 3k31_A 102 LAEEWGSLDF-VVHAVAFSDKNELKGRYVDTSLGNFLTSMHI 142 (296)
T ss_dssp HHHHHSCCSE-EEECCCCCCHHHHTSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCE-EEECCCcCCcccccCChhhCCHHHHHHHHHH
Confidence 5444346664 444442211 1 23556666666654
No 453
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=26.03 E-value=1.9e+02 Score=26.25 Aligned_cols=51 Identities=10% Similarity=0.069 Sum_probs=37.7
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK 221 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~ 221 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSN--GCDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 4579999999988876554 45555554 345555679999999999988764
No 454
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=26.02 E-value=86 Score=28.41 Aligned_cols=54 Identities=24% Similarity=0.255 Sum_probs=38.9
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
+..+|.+.+++.++..... +..++++ -++--+..++.+|.+++++.+.+ ++.+|
T Consensus 13 dg~iD~~~l~~lv~~li~~---v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL---VDGLLVY-GSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG---SSCCEET-CTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCcCHHHHHHHHHHHHhh---CCEEEEC-CcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 4579999999998875432 4555543 44555567999999999999887 65555
No 455
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=25.82 E-value=2.2e+02 Score=26.74 Aligned_cols=58 Identities=17% Similarity=0.223 Sum_probs=39.6
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 73 ~dg~ID~~al~~lv~~li~~--Gv~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQN--GAEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 35578999999888765543 45666654 334455678999999998877653 456664
No 456
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=25.68 E-value=1.6e+02 Score=25.35 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=20.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPT 140 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~ 140 (464)
.++||.|+...=..+...|.+.|..|++..
T Consensus 4 ~vlVTGas~giG~~~a~~l~~~G~~V~~~~ 33 (239)
T 2ekp_A 4 KALVTGGSRGIGRAIAEALVARGYRVAIAS 33 (239)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 467776666655666667778888877654
No 457
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=25.57 E-value=67 Score=28.71 Aligned_cols=75 Identities=20% Similarity=0.362 Sum_probs=48.6
Q ss_pred eEEEcCCCCCChhhhcc---cCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHH
Q 037587 135 AFLLPTPYYPGFDRDLK---WRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQEL 211 (464)
Q Consensus 135 ~Vlv~~p~y~~~~~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l 211 (464)
.||+....|.+....+. ......+.. .+|-+|+-++.++-.- ..++|++.- .+++.+++
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~v~lPvLr------KDFiid~yQI~eAr~~------GADaILLI~------a~L~~~~l 142 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASSVSIPILM------SDFIVKESQIDDAYNL------GADTVLLIV------KILTEREL 142 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTTCSSCEEE------ESCCCSHHHHHHHHHH------TCSEEEEEG------GGSCHHHH
T ss_pred EEeCCCCCCCCCHHHHHHHHHhcCCCEee------ccccccHHHHHHHHHc------CCCeeehHH------hhcCHHHH
Confidence 46677777766554433 222333321 4788998887776443 445554432 35888999
Q ss_pred HHHHHHHhhCCeEEEE
Q 037587 212 NHLINFSKSKRIHIVS 227 (464)
Q Consensus 212 ~~i~~~~~~~~~~lI~ 227 (464)
+++.+.|.+.|+-+++
T Consensus 143 ~~l~~~A~~lGl~~Lv 158 (258)
T 4a29_A 143 ESLLEYARSYGMEPLI 158 (258)
T ss_dssp HHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHhHHHHH
Confidence 9999999999987666
No 458
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=25.49 E-value=1.2e+02 Score=26.21 Aligned_cols=80 Identities=10% Similarity=0.049 Sum_probs=41.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcC
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLN 187 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~ 187 (464)
....|+||.|+...=..+...|.+.|..|++..-.-.......... +.++..+..|- -+.+.+.+.+++.
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~---- 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-KDNYTIEVCNL-----ANKEECSNLISKT---- 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCT-----TSHHHHHHHHHTC----
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-ccCccEEEcCC-----CCHHHHHHHHHhc----
Confidence 3445777766665555566678888988877654322222222222 22344444432 2456776666532
Q ss_pred CceEEEEEeCC
Q 037587 188 LKVKGVLITNP 198 (464)
Q Consensus 188 ~~~~~vil~~P 198 (464)
.+++. ++.|.
T Consensus 83 ~~id~-li~~A 92 (249)
T 3f9i_A 83 SNLDI-LVCNA 92 (249)
T ss_dssp SCCSE-EEECC
T ss_pred CCCCE-EEECC
Confidence 35664 44444
No 459
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=25.24 E-value=1e+02 Score=27.52 Aligned_cols=102 Identities=13% Similarity=0.146 Sum_probs=50.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccC-CCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWR-PGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
..++||.|+...=..+...|.+.|..|++..-.-.......... ...++..+..|- -|.+.+++.++.....-.
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 96 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDV-----RDRAAMSAAVDNLPEEFA 96 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHTCCGGGS
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHhC
Confidence 34666655554445555667778888776543211111111111 012455555542 256788877765433334
Q ss_pred ceEEEEEeCCCC-C-CC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPSN-P-LG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~N-P-tG--~~~s~~~l~~i~~~ 217 (464)
+++. +++|..- + .+ .-.+.++++++.+.
T Consensus 97 ~iD~-lvnnAG~~~~~~~~~~~~~~~~~~~~~v 128 (272)
T 2nwq_A 97 TLRG-LINNAGLALGTDPAQSCDLDDWDTMVDT 128 (272)
T ss_dssp SCCE-EEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 5664 4444421 1 12 12456677666653
No 460
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=25.18 E-value=1.4e+02 Score=27.43 Aligned_cols=58 Identities=14% Similarity=0.166 Sum_probs=40.0
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 28 ~dg~iD~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKLGTF--PFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TTSCBCHHHHHHHHHHHTTS--CCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 34579999999988876443 45666654 334444678999999999988764 455554
No 461
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=25.13 E-value=3.2e+02 Score=23.56 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=53.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcC---CCCeEEEcCCCCCChhhhccc----CCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 110 NKLVLTAGSTAANETLMFCLAD---PGDAFLLPTPYYPGFDRDLKW----RPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
..++||.|+...=..+...|.+ .|..|++..-.-......... ..|.++..+..|- -|.+.+++.++.
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 81 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADL-----GTEAGVQRLLSA 81 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCT-----TSHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCC-----CCHHHHHHHHHH
Confidence 3466666665555556666777 788887754322111111111 0145666666653 256777777766
Q ss_pred Hhh--cCCceE-EEEEeCCCC--CC-CCC---CCHHHHHHHHHH
Q 037587 183 AQT--LNLKVK-GVLITNPSN--PL-GTA---MTHQELNHLINF 217 (464)
Q Consensus 183 ~~~--~~~~~~-~vil~~P~N--Pt-G~~---~s~~~l~~i~~~ 217 (464)
... ...+++ .++++|..- +. +.. .+.++++++.+.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 543 212333 245555532 21 111 466777777654
No 462
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=25.00 E-value=2.1e+02 Score=24.49 Aligned_cols=101 Identities=9% Similarity=0.144 Sum_probs=50.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCC-------eEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHH
Q 037587 111 KLVLTAGSTAANETLMFCLADPGD-------AFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAY 180 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd-------~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 180 (464)
.++||.|+...=..+...|.+.|. .|++..-.-...... +... +.++..+..|- -|.+.+++.+
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~v~~~~ 77 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADI-----SDMADVRRLT 77 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCT-----TSHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecC-----CCHHHHHHHH
Confidence 366666655544555566766776 666554321111111 1122 55666666553 2567777777
Q ss_pred HHHhhcCCceEEEEEeCCCCCCCC--CCCHHHHHHHHHH
Q 037587 181 QQAQTLNLKVKGVLITNPSNPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 181 ~~~~~~~~~~~~vil~~P~NPtG~--~~s~~~l~~i~~~ 217 (464)
+.......+++.||.+--..+.+. ..+.+++++..+.
T Consensus 78 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (244)
T 2bd0_A 78 THIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT 116 (244)
T ss_dssp HHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHH
Confidence 665444446775544322222221 2456666666553
No 463
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=24.90 E-value=1.5e+02 Score=27.70 Aligned_cols=56 Identities=11% Similarity=0.137 Sum_probs=37.1
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
+..+|.+.+++.++..... .+..|+++ -++--+..++.+|.+++++.+.+. ++.||
T Consensus 46 dg~ID~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi 104 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKA--GVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDRRVPVL 104 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 4578988888888765544 34455543 344455678889988888887653 34555
No 464
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=24.80 E-value=1.9e+02 Score=25.28 Aligned_cols=82 Identities=17% Similarity=0.234 Sum_probs=43.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++.....
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-GGQCVPVVCDS-----SQESEVRSLFEQVDRE 79 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-SSEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-CCceEEEECCC-----CCHHHHHHHHHHHHHh
Confidence 3466666655555566667888898887754321111111 1112 44666666553 2567777776654332
Q ss_pred -CCceEEEEEeCC
Q 037587 187 -NLKVKGVLITNP 198 (464)
Q Consensus 187 -~~~~~~vil~~P 198 (464)
..+++. +++|.
T Consensus 80 ~~g~id~-lvnnA 91 (260)
T 2qq5_A 80 QQGRLDV-LVNNA 91 (260)
T ss_dssp HTTCCCE-EEECC
T ss_pred cCCCceE-EEECC
Confidence 345664 44444
No 465
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=24.53 E-value=1.5e+02 Score=24.75 Aligned_cols=50 Identities=6% Similarity=0.050 Sum_probs=26.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecC
Q 037587 112 LVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCS 164 (464)
Q Consensus 112 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~ 164 (464)
|+||.|+...=..+...|++.|..|.+..-.-..... .. . +++++..++.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~-~-~~~~~~~D~~ 52 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-TH-K-DINILQKDIF 52 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-HC-S-SSEEEECCGG
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-cc-C-CCeEEecccc
Confidence 6777665444445556676778777665432211111 11 3 6676665543
No 466
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=24.52 E-value=1.6e+02 Score=27.60 Aligned_cols=57 Identities=11% Similarity=-0.056 Sum_probs=36.5
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVS 227 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~ 227 (464)
+..+|.+.+++.++..... .+..|+++ -++--+..++.+|.+++++.+...++.||.
T Consensus 41 dg~ID~~~l~~lv~~li~~--Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIAD--GMSAVVYC-GSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCCCEEES-SGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 4578888888888765443 44555543 334444578888888888874334555553
No 467
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=24.51 E-value=2e+02 Score=28.57 Aligned_cols=103 Identities=19% Similarity=0.224 Sum_probs=53.7
Q ss_pred CCCCcEEEeCChHHHHH-HHHHHhcCCCCe-EEEc-CCCC-------------CC---hhhhcccCCCcEEEEEecCCCC
Q 037587 107 FDPNKLVLTAGSTAANE-TLMFCLADPGDA-FLLP-TPYY-------------PG---FDRDLKWRPGVEIVPIHCSSSN 167 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~-~~~~~l~~~gd~-Vlv~-~p~y-------------~~---~~~~~~~~~g~~~~~v~~~~~~ 167 (464)
+.++.+++.+|++.+|- .+...|.+.|.. |++. .-.- .. ....+... |.++..+.+|-
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv-- 324 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL-GATATVVTCDL-- 324 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH-TCEEEEEECCT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc-CCEEEEEECCC--
Confidence 34455555555554544 444556677765 4443 2211 11 11223334 77888887763
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
-|.+.+.+.++... ...++..|| .+.. ...+. .++.++++++++.
T Consensus 325 ---td~~~v~~~~~~i~-~~g~id~vV-h~AGv~~~~~~~~~~~~~~~~v~~~ 372 (525)
T 3qp9_A 325 ---TDAEAAARLLAGVS-DAHPLSAVL-HLPPTVDSEPLAATDADALARVVTA 372 (525)
T ss_dssp ---TSHHHHHHHHHTSC-TTSCEEEEE-ECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHH-hcCCCcEEE-ECCcCCCCCchhhCCHHHHHHHHHH
Confidence 25788888877644 334666544 4442 22222 3567777777654
No 468
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=24.46 E-value=4e+02 Score=24.15 Aligned_cols=107 Identities=23% Similarity=0.312 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEe
Q 037587 87 PDAKKELVKLMARIRGNKVKFDPNKLVLTAGS---TAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIH 162 (464)
Q Consensus 87 ~~lr~~ia~~~~~~~~~~~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~ 162 (464)
.+=|..+.+..-+..+. .-.|+++.|+ .+++.++-.+- +-| |.|++..|.|...
T Consensus 68 ~~Er~~v~~~~~~~~~g-----rvpviaGvg~~st~~ai~la~~A~-~~Gadavlv~~P~y~~~---------------- 125 (304)
T 3cpr_A 68 AAEKLELLKAVREEVGD-----RAKLIAGVGTNNTRTSVELAEAAA-SAGADGLLVVTPYYSKP---------------- 125 (304)
T ss_dssp HHHHHHHHHHHHHHHTT-----TSEEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECCCSSCC----------------
T ss_pred HHHHHHHHHHHHHHhCC-----CCcEEecCCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCCCC----------------
Confidence 45555666655443221 1237777665 66666664443 334 8899999977421
Q ss_pred cCCCCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEec
Q 037587 163 CSSSNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDE 229 (464)
Q Consensus 163 ~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~De 229 (464)
+.+.+.+.++...... ...++++++|. .||..++.+.+.+|++ ..++.=|=|.
T Consensus 126 ---------~~~~l~~~f~~ia~a~-~lPiilYn~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 178 (304)
T 3cpr_A 126 ---------SQEGLLAHFGAIAAAT-EVPICLYDIPG-RSGIPIESDTMRRLSE---LPTILAVXDA 178 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHC-CSCEEEEECHH-HHSSCCCHHHHHHHTT---STTEEEEEEC
T ss_pred ---------CHHHHHHHHHHHHHhc-CCCEEEEeCcc-ccCcCCCHHHHHHHHc---CCCEEEEecC
Confidence 1122222222221111 34567777774 4799999888777754 2355555554
No 469
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=24.46 E-value=2.6e+02 Score=22.08 Aligned_cols=104 Identities=11% Similarity=0.100 Sum_probs=58.8
Q ss_pred cEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.++++-+- .+.+.-+...|.+-|-+++....+. ..++.. |+++..+.--.+++-.-+...+.+.+.+ .
T Consensus 26 gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GTa----~~L~~~-Gi~v~~v~k~~egg~~~~~~~i~d~i~~-----g 95 (143)
T 2yvq_A 26 GILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATS----DWLNAN-NVPATPVAWPSQEGQNPSLSSIRKLIRD-----G 95 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHH----HHHHHT-TCCCEEECCGGGC-----CBCHHHHHHT-----T
T ss_pred CEEEEecccchHHHHHHHHHHHHCCCEEEECchHH----HHHHHc-CCeEEEEEeccCCCcccccccHHHHHHC-----C
Confidence 37777665 4555555667777788877776543 233444 8877777532222100000124444443 3
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEEEe
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSD 228 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~D 228 (464)
++.+ +++.|. +..-+..+-..|...|-+++++++..
T Consensus 96 ~i~l-VInt~~---~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 96 SIDL-VINLPN---NNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp SCCE-EEECCC---CCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred CceE-EEECCC---CCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 6765 444452 21233577888899999999988743
No 470
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=24.13 E-value=3e+02 Score=23.33 Aligned_cols=99 Identities=15% Similarity=0.194 Sum_probs=48.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChhhh---cccCCCcEEEE-EecCCCCCcccCHHHHHHHHHHHhh
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFDRD---LKWRPGVEIVP-IHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~~g~~~~~-v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
.++||.|+...=..+...|.+.|..|++. .-.-...... +... +.++.. +..|- -|.+.+++.+++...
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-GSPLVAVLGANL-----LEAEAATALVHQAAE 76 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-TCSCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCceEEEEeccC-----CCHHHHHHHHHHHHH
Confidence 36676666555556666788888887765 3221111111 1112 333333 44442 246677776665433
Q ss_pred cCCceEEEEEeCCC-CCCC--CCCCHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NPLG--TAMTHQELNHLIN 216 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NPtG--~~~s~~~l~~i~~ 216 (464)
.-.+++.+| .+.. .+.+ ...+.+++++..+
T Consensus 77 ~~~~~d~li-~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 77 VLGGLDTLV-NNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HHTCCCEEE-ECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEE-ECCCCCCCCCcccCCHHHHHHHHh
Confidence 333566544 4432 2222 2245566655554
No 471
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.10 E-value=1.8e+02 Score=24.45 Aligned_cols=30 Identities=10% Similarity=-0.036 Sum_probs=18.8
Q ss_pred cEEEeCChHHHHHHHHHHhc-CCCCeEEEcC
Q 037587 111 KLVLTAGSTAANETLMFCLA-DPGDAFLLPT 140 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~ 140 (464)
.|+||.|+...=..+...|+ ..|..|.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~ 37 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYG 37 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEe
Confidence 37777665544455556677 6887776654
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=24.06 E-value=1.5e+02 Score=28.96 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=56.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
+....|++..|+..+...+ ..|++.|..|.+.+|....-........+++++.- .| ..+.+.
T Consensus 10 l~~~~vlVvGgG~va~~k~-~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~------~~--~~~~l~--------- 71 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKA-RLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEG------PF--DETLLD--------- 71 (457)
T ss_dssp CBTCEEEEECCSHHHHHHH-HHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEES------SC--CGGGGT---------
T ss_pred CCCCEEEEECCCHHHHHHH-HHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEEC------CC--CccccC---------
Confidence 3455788888888888877 45667788888888875432222221114444431 12 222222
Q ss_pred CCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEE-EEeccc
Q 037587 187 NLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHI-VSDEIY 231 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~l-I~Deay 231 (464)
+.. +++..|++| +.=..+++.|++.++++ ++|+.-
T Consensus 72 --~~~-lVi~at~~~-------~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 72 --SCW-LAIAATDDD-------TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp --TCS-EEEECCSCH-------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred --Ccc-EEEEcCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 233 344456554 23456888899999876 567653
No 473
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=23.96 E-value=1.6e+02 Score=26.03 Aligned_cols=82 Identities=13% Similarity=0.067 Sum_probs=42.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 108 DPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 108 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
....++||.|+...=..+...|.+.|..|++..-.-...... .... +.++..+..|- -|.+.+++.+++..
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~Dl-----~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-GVHSKAYKCNI-----SDPKSVEETISQQE 106 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-CSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcceEEEeec-----CCHHHHHHHHHHHH
Confidence 344577776655544555566777787777654322222111 1112 44555555542 25677777766543
Q ss_pred hcCCceEEEEE
Q 037587 185 TLNLKVKGVLI 195 (464)
Q Consensus 185 ~~~~~~~~vil 195 (464)
....+++.||.
T Consensus 107 ~~~g~id~li~ 117 (279)
T 3ctm_A 107 KDFGTIDVFVA 117 (279)
T ss_dssp HHHSCCSEEEE
T ss_pred HHhCCCCEEEE
Confidence 33335665443
No 474
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=23.91 E-value=3.5e+02 Score=27.34 Aligned_cols=97 Identities=13% Similarity=0.112 Sum_probs=50.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChhhhcccCCCcEEEEEecCCCCCcccCH-HHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANETLMFCLADPGDAFLLPTPYY-PGFDRDLKWRPGVEIVPIHCSSSNGFRITI-SALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~-~~l~~~i~~~~~~~~ 188 (464)
.++||.|++..=..+...|.+.|.+|++.+-.- ......+... |.+++.+.. |+ +..++.++.....-.
T Consensus 324 valVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~-g~~~~~~~~--------Dv~~~~~~~~~~~~~~~G 394 (604)
T 2et6_A 324 VVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAA-GGEAWPDQH--------DVAKDSEAIIKNVIDKYG 394 (604)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCEEEEECC--------CHHHHHHHHHHHHHHHHS
T ss_pred eEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhc-CCeEEEEEc--------ChHHHHHHHHHHHHHhcC
Confidence 355655555544555566788898888764210 0111122223 556655543 44 444444444333334
Q ss_pred ceEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
+++ ++++|.. ...+ .-++.++++++++.
T Consensus 395 ~iD-iLVnNAGi~~~~~~~~~~~~~~~~~~~v 425 (604)
T 2et6_A 395 TID-ILVNNAGILRDRSFAKMSKQEWDSVQQV 425 (604)
T ss_dssp CCC-EEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 666 4566653 2222 24677888888774
No 475
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.61 E-value=3.6e+02 Score=23.29 Aligned_cols=102 Identities=20% Similarity=0.271 Sum_probs=52.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|.+.|..|++..-.-...... +... |.++..+..|- -|.+.+++.++....
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-GLSVTGTVCHV-----GKAEDRERLVAMAVN 87 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 34567776665555566667778888877654321111111 1222 44555565542 256666666665433
Q ss_pred cCCceEEEEEeCCC-CC-CCC--CCCHHHHHHHHHH
Q 037587 186 LNLKVKGVLITNPS-NP-LGT--AMTHQELNHLINF 217 (464)
Q Consensus 186 ~~~~~~~vil~~P~-NP-tG~--~~s~~~l~~i~~~ 217 (464)
...+++. +++|.. .+ .+. -.+.++++++.+.
T Consensus 88 ~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~~ 122 (260)
T 2zat_A 88 LHGGVDI-LVSNAAVNPFFGNIIDATEEVWDKILHV 122 (260)
T ss_dssp HHSCCCE-EEECCCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HcCCCCE-EEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 3346664 444442 21 221 2466666666553
No 476
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=23.39 E-value=2.3e+02 Score=24.40 Aligned_cols=102 Identities=16% Similarity=0.199 Sum_probs=52.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChhh---hcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLP-TPYYPGFDR---DLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
...++||.|++..=..+...|.+.|..|++. ...-..... .+... +.++..+..|-. |.+.+++.++...
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~-----~~~~~~~~~~~~~ 80 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-GGSAFSIGANLE-----SLHGVEALYSSLD 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-TCEEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-CCceEEEecCcC-----CHHHHHHHHHHHH
Confidence 3456676666655556667788889887763 322221111 12233 566766666532 4555555554432
Q ss_pred hc------CCceEEEEEeCCC-CCCCC--CCCHHHHHHHHHH
Q 037587 185 TL------NLKVKGVLITNPS-NPLGT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~------~~~~~~vil~~P~-NPtG~--~~s~~~l~~i~~~ 217 (464)
.. ..+++. +++|.. .+.+. ..+.+++++..+.
T Consensus 81 ~~~~~~~~~~~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (255)
T 3icc_A 81 NELQNRTGSTKFDI-LINNAGIGPGAFIEETTEQFFDRMVSV 121 (255)
T ss_dssp HHHHHHHSSSCEEE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHhcccccCCcccE-EEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 11 123664 444442 33332 2466666666553
No 477
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=23.34 E-value=26 Score=36.72 Aligned_cols=26 Identities=19% Similarity=0.448 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 208 HQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 208 ~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
.++++++++.|+++|+-||.|-+|-+
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NH 340 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNH 340 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 48999999999999999999999975
No 478
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=23.30 E-value=2.9e+02 Score=24.16 Aligned_cols=96 Identities=10% Similarity=0.138 Sum_probs=47.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 111 KLVLTAGSTAANETLMFCLADP--GDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
.|+||.|+...=..+...|++. |..|.+..-.-..... +... +++++..++. |.+.+.++++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~~~-~~~~~~~D~~-------d~~~l~~~~~------- 65 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LADQ-GVEVRHGDYN-------QPESLQKAFA------- 65 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HHHT-TCEEEECCTT-------CHHHHHHHTT-------
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hhhc-CCeEEEeccC-------CHHHHHHHHh-------
Confidence 3667666444445555667766 7665554322111111 1123 5665544332 5677777664
Q ss_pred ceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCe
Q 037587 189 KVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 189 ~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~ 223 (464)
++..|+.+-..++ +......-...+++.|.+.++
T Consensus 66 ~~d~vi~~a~~~~-~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 66 GVSKLLFISGPHY-DNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp TCSEEEECCCCCS-CHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEEcCCCCc-CchHHHHHHHHHHHHHHHcCC
Confidence 4565555433222 110012345677788877764
No 479
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=23.28 E-value=39 Score=35.35 Aligned_cols=26 Identities=23% Similarity=0.363 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 208 HQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 208 ~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
.++++++++.|+++|+-||.|-+|-+
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH 279 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNH 279 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTB
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCc
Confidence 59999999999999999999999874
No 480
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=23.28 E-value=3e+02 Score=24.25 Aligned_cols=100 Identities=8% Similarity=0.063 Sum_probs=48.5
Q ss_pred CcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCC---ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHh
Q 037587 110 NKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYP---GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQ 184 (464)
Q Consensus 110 ~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~ 184 (464)
..++||.|+ ...=..+...|.+.|..|++..-.-. ......... +. +..+..|- -|.+.+++.++...
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~~-~~~~~~Dl-----~~~~~v~~~~~~~~ 94 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF-GS-DLVVKCDV-----SLDEDIKNLKKFLE 94 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-TC-CCEEECCT-----TCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CC-eEEEEcCC-----CCHHHHHHHHHHHH
Confidence 346676665 33334455567778887776532211 011111112 21 33344432 25677777776654
Q ss_pred hcCCceEEEEEeCCC-CCC----CC--CCCHHHHHHHHHH
Q 037587 185 TLNLKVKGVLITNPS-NPL----GT--AMTHQELNHLINF 217 (464)
Q Consensus 185 ~~~~~~~~vil~~P~-NPt----G~--~~s~~~l~~i~~~ 217 (464)
+...+++. +++|.. .+. +. ..+.+++++..+.
T Consensus 95 ~~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (285)
T 2p91_A 95 ENWGSLDI-IVHSIAYAPKEEFKGGVIDTSREGFKIAMDI 133 (285)
T ss_dssp HHTSCCCE-EEECCCCCCGGGGSSCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCcccCCCCcccCCHHHHHHHHHH
Confidence 44456774 444442 111 11 3466677666653
No 481
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.10 E-value=3.7e+02 Score=23.25 Aligned_cols=76 Identities=16% Similarity=-0.011 Sum_probs=39.2
Q ss_pred cEEEeCC-hHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 111 KLVLTAG-STAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 111 ~i~it~G-~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
.|.+..| -.+++..+-..+-..|..|++..-+- ...++...+++|+.++.. .-++.+++..+...+.
T Consensus 40 ~I~vi~~~le~av~~a~~~~~~~~~dVIISRGgt---a~~Lr~~~~iPVV~I~vs--------~~Dil~aL~~a~~~~~- 107 (225)
T 2pju_A 40 NITPIQLGFEKAVTYIRKKLANERCDAIIAAGSN---GAYLKSRLSVPVILIKPS--------GYDVLQFLAKAGKLTS- 107 (225)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHHH---HHHHHTTCSSCEEEECCC--------HHHHHHHHHHTTCTTS-
T ss_pred eEEEecCcHHHHHHHHHHHHhcCCCeEEEeCChH---HHHHHhhCCCCEEEecCC--------HHHHHHHHHHHHhhCC-
Confidence 4555444 45577666554433344466654322 222333347888888753 3455556665444333
Q ss_pred eEEEEEeCCC
Q 037587 190 VKGVLITNPS 199 (464)
Q Consensus 190 ~~~vil~~P~ 199 (464)
+..++..++
T Consensus 108 -kIavVg~~~ 116 (225)
T 2pju_A 108 -SIGVVTYQE 116 (225)
T ss_dssp -CEEEEEESS
T ss_pred -cEEEEeCch
Confidence 334555554
No 482
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.09 E-value=2.1e+02 Score=26.31 Aligned_cols=58 Identities=21% Similarity=0.250 Sum_probs=40.6
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 36 ~dg~iD~~~l~~li~~li~~--Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQ--GINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHT--TCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35679999999988876544 45555544 345556678999999999888663 355554
No 483
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=22.80 E-value=3.9e+02 Score=23.47 Aligned_cols=103 Identities=12% Similarity=0.063 Sum_probs=51.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTL 186 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~ 186 (464)
..++||.|+...=..+...|.+.|..|++..-.-...... +....+.++..+..|- -|.+.+++.++.....
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTM-----EDMTFAEQFVAQAGKL 103 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCC-----CCHHHHHHHHHHHHHH
Confidence 4577776665554555666777888877654322111111 1112122555666542 2456676666554333
Q ss_pred CCceEEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q 037587 187 NLKVKGVLITNPSNPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 187 ~~~~~~vil~~P~NPtG--~~~s~~~l~~i~~~ 217 (464)
..+++.+|.+......+ ...+.+++++..+.
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~v 136 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEV 136 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHH
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHH
Confidence 34666555431222111 12356666666553
No 484
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=22.65 E-value=3.7e+02 Score=23.08 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=47.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCC
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNL 188 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~ 188 (464)
...++||.|+...=..+...|.+.|..|++..-.-.. .. ... .+..|- -|.+.+++.++...+...
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~---~~~--~~~~D~-----~~~~~~~~~~~~~~~~~g 80 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA----PK---GLF--GVEVDV-----TDSDAVDRAFTAVEEHQG 80 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC----CT---TSE--EEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH----HH---Hhc--CeeccC-----CCHHHHHHHHHHHHHHcC
Confidence 3456676666555556666778888887765322111 11 111 234332 256777777665443334
Q ss_pred ceEEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q 037587 189 KVKGVLITNPSNPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 189 ~~~~vil~~P~NPtG--~~~s~~~l~~i~~~ 217 (464)
+++.+|.+--..+.+ ...+.++++++.+.
T Consensus 81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 1uzm_A 81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINA 111 (247)
T ss_dssp SCSEEEEECSCCC-----CCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 566544332222222 23466677666653
No 485
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.48 E-value=3.7e+02 Score=23.01 Aligned_cols=95 Identities=9% Similarity=0.074 Sum_probs=46.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 110 NKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 110 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
..++||.|+...=..+...|.+.|..|++..-.-....... .. + ++..+..|- -|.+.+++..+. -.+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-~-~~~~~~~D~-----~~~~~~~~~~~~----~~~ 74 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-P-GIQTRVLDV-----TKKKQIDQFANE----VER 74 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-T-TEEEEECCT-----TCHHHHHHHHHH----CSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-c-CceEEEeeC-----CCHHHHHHHHHH----hCC
Confidence 45667666655555666677788888777543211111111 12 1 334444432 145666654443 235
Q ss_pred eEEEEEeCCC-CCCC--CCCCHHHHHHHHHH
Q 037587 190 VKGVLITNPS-NPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 190 ~~~vil~~P~-NPtG--~~~s~~~l~~i~~~ 217 (464)
++. +++|.. .+.+ ...+.++++++.+.
T Consensus 75 id~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (246)
T 2ag5_A 75 LDV-LFNVAGFVHHGTVLDCEEKDWDFSMNL 104 (246)
T ss_dssp CSE-EEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCE-EEECCccCCCCCcccCCHHHHHHHHHH
Confidence 664 444442 2222 12456666666553
No 486
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=22.30 E-value=2.9e+02 Score=23.91 Aligned_cols=37 Identities=16% Similarity=0.287 Sum_probs=27.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC
Q 037587 107 FDPNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYP 144 (464)
Q Consensus 107 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~ 144 (464)
+....|++..|+..|...+ ..|++.|-.|.+-+|...
T Consensus 29 L~gk~VLVVGgG~va~~ka-~~Ll~~GA~VtVvap~~~ 65 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRI-KGFLQEGAAITVVAPTVS 65 (223)
T ss_dssp CTTCCEEEECCSHHHHHHH-HHHGGGCCCEEEECSSCC
T ss_pred cCCCEEEEECCCHHHHHHH-HHHHHCCCEEEEECCCCC
Confidence 5566788888887777776 556677878888888764
No 487
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=22.11 E-value=1.9e+02 Score=26.07 Aligned_cols=55 Identities=20% Similarity=0.259 Sum_probs=36.0
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
+. +|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 17 dg-iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKS--KTDAIIVC-GTTGEATTMTETERKETIKFVIDKVNKRIPVI 74 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHT--TCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CC-cCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 44 8989888888765443 45555554 334444568888888888887652 35555
No 488
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=22.07 E-value=3.3e+02 Score=23.57 Aligned_cols=103 Identities=11% Similarity=0.089 Sum_probs=50.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhh---cccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhh
Q 037587 109 PNKLVLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRD---LKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQT 185 (464)
Q Consensus 109 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~ 185 (464)
...++||.|+...=..+...|++.|..|++..-.-...... +... +.++..+..|- -|.+.+++.++....
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-GFQVTGSVCDA-----SLRPEREKLMQTVSS 87 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeeEEEECCC-----CCHHHHHHHHHHHHH
Confidence 34566766655555566667777888777654321111111 1122 44555555542 245667766655433
Q ss_pred cC-CceEEEEEeCCCCCCC--CCCCHHHHHHHHHH
Q 037587 186 LN-LKVKGVLITNPSNPLG--TAMTHQELNHLINF 217 (464)
Q Consensus 186 ~~-~~~~~vil~~P~NPtG--~~~s~~~l~~i~~~ 217 (464)
.- .+++.||.+--..+.+ ...+.+++++..+.
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 122 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIST 122 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 22 3666555442222222 12456666665553
No 489
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=22.03 E-value=2.3e+02 Score=28.41 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=47.6
Q ss_pred CCCCeEEEcCCCCCChhh-------hcccCCCcEEEEEecCC-CCCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCC
Q 037587 131 DPGDAFLLPTPYYPGFDR-------DLKWRPGVEIVPIHCSS-SNGFRITISALENAYQQAQTLNLKVKGVLITNPSNPL 202 (464)
Q Consensus 131 ~~gd~Vlv~~p~y~~~~~-------~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPt 202 (464)
+++|.|++.....++... ..... |++++...... .-.-.-|.++|...++.. +++-++..+
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~-g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~-----~Pk~vipvH----- 405 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYAL-GAYVLYPPTYKVHASGHASQEELKLILNLT-----TPRFFLPWH----- 405 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHT-TCEEECTTTSSSCCCSSCCHHHHHHHHHHH-----CCSEEEEES-----
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeC-CCEEEEccCCceEEeCCCCHHHHHHHHHhc-----CCCEEEEEc-----
Confidence 789999998877766522 22234 88876532100 001234778888888765 677777664
Q ss_pred CCCCCHHHHHHHHHHHhhCCe
Q 037587 203 GTAMTHQELNHLINFSKSKRI 223 (464)
Q Consensus 203 G~~~s~~~l~~i~~~~~~~~~ 223 (464)
|.. ..+.++.+++++.|+
T Consensus 406 Ge~---~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 406 GEV---RHQMNFKWLAESMSR 423 (562)
T ss_dssp BCH---HHHHHHHHHHHTSSS
T ss_pred CCH---HHHHHHHHHHHHcCC
Confidence 222 456667777776653
No 490
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=22.02 E-value=3.1e+02 Score=26.95 Aligned_cols=98 Identities=18% Similarity=0.293 Sum_probs=53.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCC-eEEEcCCC---CCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 111 KLVLTAGSTAANETLMFCLADPGD-AFLLPTPY---YPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~gd-~Vlv~~p~---y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
.++||.|+...=..+...|.+.|. .|++..-. -.. ....+... |.++..+.+|- -|.+.+.+.+++.
T Consensus 241 ~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dv-----td~~~v~~~~~~i 314 (496)
T 3mje_A 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GVRVTIAACDA-----ADREALAALLAEL 314 (496)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCT-----TCHHHHHHHHHTC
T ss_pred EEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc-CCeEEEEEccC-----CCHHHHHHHHHHH
Confidence 455665555444555566777786 55543221 111 11223344 78888888763 2678888888764
Q ss_pred hhcCCceEEEEEeCCC-C-CCCC--CCCHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPS-N-PLGT--AMTHQELNHLIN 216 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~-N-PtG~--~~s~~~l~~i~~ 216 (464)
... .++..| +.|.. . ..+. .++.++++++++
T Consensus 315 ~~~-g~ld~v-Vh~AGv~~~~~~l~~~t~e~~~~vl~ 349 (496)
T 3mje_A 315 PED-APLTAV-FHSAGVAHDDAPVADLTLGQLDALMR 349 (496)
T ss_dssp CTT-SCEEEE-EECCCCCCSCCCTTTCCHHHHHHHHH
T ss_pred HHh-CCCeEE-EECCcccCCCCCcccCCHHHHHHHHH
Confidence 333 356644 44442 2 2232 356677766655
No 491
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=21.97 E-value=4.2e+02 Score=23.95 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=0.0
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEE
Q 037587 113 VLTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKG 192 (464)
Q Consensus 113 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~ 192 (464)
+-+++..+++.++-.+---.-|.|++..|.|. . ++.+.+.+.++......+ ..+
T Consensus 80 vg~~~t~~ai~la~~a~~~Gadavlv~~P~y~--------~-----------------~~~~~l~~~f~~va~a~~-lPi 133 (300)
T 3eb2_A 80 VASTSVADAVAQAKLYEKLGADGILAILEAYF--------P-----------------LKDAQIESYFRAIADAVE-IPV 133 (300)
T ss_dssp EEESSHHHHHHHHHHHHHHTCSEEEEEECCSS--------C-----------------CCHHHHHHHHHHHHHHCS-SCE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC--------C-----------------CCHHHHHHHHHHHHHHCC-CCE
Q ss_pred EEEeCCCCCCCCCCCHHHHHHHHH
Q 037587 193 VLITNPSNPLGTAMTHQELNHLIN 216 (464)
Q Consensus 193 vil~~P~NPtG~~~s~~~l~~i~~ 216 (464)
+++++| -.||..++.+.+.+|.+
T Consensus 134 ilYn~P-~~tg~~l~~~~~~~La~ 156 (300)
T 3eb2_A 134 VIYTNP-QFQRSDLTLDVIARLAE 156 (300)
T ss_dssp EEEECT-TTCSSCCCHHHHHHHHT
T ss_pred EEEECc-cccCCCCCHHHHHHHHc
No 492
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=21.70 E-value=3e+02 Score=23.94 Aligned_cols=101 Identities=10% Similarity=0.041 Sum_probs=48.5
Q ss_pred CCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCC---ChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHH
Q 037587 109 PNKLVLTAGS--TAANETLMFCLADPGDAFLLPTPYYP---GFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQA 183 (464)
Q Consensus 109 ~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~---~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 183 (464)
...++||.|+ ...=..+...|.+.|..|++..-.-. ......... +. +..+..|- -|.+.+++.+++.
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~~-~~~~~~D~-----~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL-GG-ALLFRADV-----TQDEELDALFAGV 80 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT-TC-CEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CC-cEEEECCC-----CCHHHHHHHHHHH
Confidence 3457777765 33334455566677877776542211 011111112 21 33444442 2567777766654
Q ss_pred hhcCCceEEEEEeCCCC-CC----CC--CCCHHHHHHHHHH
Q 037587 184 QTLNLKVKGVLITNPSN-PL----GT--AMTHQELNHLINF 217 (464)
Q Consensus 184 ~~~~~~~~~vil~~P~N-Pt----G~--~~s~~~l~~i~~~ 217 (464)
.....+++. +++|..- +. +. ..+.+++++..+.
T Consensus 81 ~~~~g~iD~-lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (261)
T 2wyu_A 81 KEAFGGLDY-LVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120 (261)
T ss_dssp HHHHSSEEE-EEECCCCCCHHHHSSCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCE-EEECCCCCCcccCCCCcccCCHHHHHHHHHH
Confidence 433346664 4444421 11 11 2456666666553
No 493
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=21.59 E-value=2e+02 Score=26.09 Aligned_cols=56 Identities=18% Similarity=0.278 Sum_probs=37.4
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIV 226 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI 226 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|
T Consensus 15 dg~iD~~~l~~lv~~li~~--Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 73 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDN--GTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVI 73 (294)
T ss_dssp TTEECHHHHHHHHHHHHTT--TCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCCcCHHHHHHHHHHHHHC--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3468889888888765443 45555554 334445678889998888887653 35555
No 494
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=21.55 E-value=1.8e+02 Score=26.77 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=40.3
Q ss_pred CCcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 167 NGFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 167 ~~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
.+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.||.
T Consensus 38 ~dg~iD~~~l~~lv~~li~~--Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 38 ADGGLDLPALGRSIERLIDG--GVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp TTSSBCHHHHHHHHHHHHHT--TCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35579999999988876544 45555554 344455678999999999988653 355554
No 495
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=21.51 E-value=57 Score=31.73 Aligned_cols=27 Identities=11% Similarity=0.251 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 207 THQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 207 s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
+.++++++++.|+++|+-||.|-++-+
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH 89 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINH 89 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecc
Confidence 469999999999999999999998864
No 496
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=21.39 E-value=1.9e+02 Score=26.79 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=30.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhCCeEEEEeccccc
Q 037587 198 PSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSG 233 (464)
Q Consensus 198 P~NPtG~~~s~~~l~~i~~~~~~~~~~lI~Deay~~ 233 (464)
-++|.|...+.+.+.++++.|+++|+.+++|=-|++
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd 84 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSD 84 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 467888888999999999999999999999965544
No 497
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=21.29 E-value=1.1e+02 Score=27.98 Aligned_cols=57 Identities=14% Similarity=0.107 Sum_probs=40.1
Q ss_pred CcccCHHHHHHHHHHHhhcCCceEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhC---CeEEEE
Q 037587 168 GFRITISALENAYQQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSK---RIHIVS 227 (464)
Q Consensus 168 ~~~~d~~~l~~~i~~~~~~~~~~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~---~~~lI~ 227 (464)
+..+|.+.+++.++..... .+..++++ -++--+..++.+|.+++++.+.+. ++.+|.
T Consensus 23 dg~iD~~~l~~lv~~li~~--Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDA--GSDGLCIL-ANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHT--TCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHc--CCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4579999999998876554 45555554 334455678999999999988663 355553
No 498
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.19 E-value=3.7e+02 Score=22.53 Aligned_cols=75 Identities=15% Similarity=0.034 Sum_probs=42.0
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCceEEE
Q 037587 114 LTAGSTAANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLKVKGV 193 (464)
Q Consensus 114 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v 193 (464)
...+-.+++..+-. + +.|..|++..-+- ...++...+++|+.++.. .-++.+++..+...+. +..
T Consensus 34 ~~~~l~~~v~~a~~-~-~~~~dVIISRGgt---a~~lr~~~~iPVV~I~~s--------~~Dil~al~~a~~~~~--kIa 98 (196)
T 2q5c_A 34 KTASLTRASKIAFG-L-QDEVDAIISRGAT---SDYIKKSVSIPSISIKVT--------RFDTMRAVYNAKRFGN--ELA 98 (196)
T ss_dssp EECCHHHHHHHHHH-H-TTTCSEEEEEHHH---HHHHHTTCSSCEEEECCC--------HHHHHHHHHHHGGGCS--EEE
T ss_pred EECCHHHHHHHHHH-h-cCCCeEEEECChH---HHHHHHhCCCCEEEEcCC--------HhHHHHHHHHHHhhCC--cEE
Confidence 34445667776654 4 6675566665322 223333348889988853 3555666666554443 445
Q ss_pred EEeCCCCCCC
Q 037587 194 LITNPSNPLG 203 (464)
Q Consensus 194 il~~P~NPtG 203 (464)
++..++-+.|
T Consensus 99 vvg~~~~~~~ 108 (196)
T 2q5c_A 99 LIAYKHSIVD 108 (196)
T ss_dssp EEEESSCSSC
T ss_pred EEeCcchhhH
Confidence 6666654433
No 499
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=21.11 E-value=2.6e+02 Score=24.29 Aligned_cols=85 Identities=7% Similarity=0.067 Sum_probs=42.2
Q ss_pred CCCcEEEeCChH--HHHHHHHHHhcCCCCeEEEcCCCCCC---hhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHH
Q 037587 108 DPNKLVLTAGST--AANETLMFCLADPGDAFLLPTPYYPG---FDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQ 182 (464)
Q Consensus 108 ~~~~i~it~G~~--~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 182 (464)
....++||.|+. ..=..+...|.+.|..|++..-.-.. .........+.++..+..|-. |.+.+++.+++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVT-----NDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCS-----SSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCC-----CHHHHHHHHHH
Confidence 344577777663 24444556677788887765432111 111122221224555555421 45666666665
Q ss_pred HhhcCCceEEEEEeCC
Q 037587 183 AQTLNLKVKGVLITNP 198 (464)
Q Consensus 183 ~~~~~~~~~~vil~~P 198 (464)
......+++. ++.|.
T Consensus 81 ~~~~~g~id~-li~~A 95 (266)
T 3oig_A 81 IKEQVGVIHG-IAHCI 95 (266)
T ss_dssp HHHHHSCCCE-EEECC
T ss_pred HHHHhCCeeE-EEEcc
Confidence 4443345664 44444
No 500
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.05 E-value=2.4e+02 Score=20.43 Aligned_cols=90 Identities=11% Similarity=0.097 Sum_probs=48.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChhhhcccCCCcEEEEEecCCCCCcccCHHHHHHHHHHHhhcCCc
Q 037587 111 KLVLTAGSTAANETLMFCLADPG-DAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAYQQAQTLNLK 189 (464)
Q Consensus 111 ~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~~~~ 189 (464)
.|+++.++.-+..++ ..+...| ..|.+.+..-.... .+... +...+..+.. +.+.+.+.+. +
T Consensus 7 ~v~I~G~G~iG~~~~-~~l~~~g~~~v~~~~r~~~~~~-~~~~~-~~~~~~~d~~-------~~~~~~~~~~-------~ 69 (118)
T 3ic5_A 7 NICVVGAGKIGQMIA-ALLKTSSNYSVTVADHDLAALA-VLNRM-GVATKQVDAK-------DEAGLAKALG-------G 69 (118)
T ss_dssp EEEEECCSHHHHHHH-HHHHHCSSEEEEEEESCHHHHH-HHHTT-TCEEEECCTT-------CHHHHHHHTT-------T
T ss_pred eEEEECCCHHHHHHH-HHHHhCCCceEEEEeCCHHHHH-HHHhC-CCcEEEecCC-------CHHHHHHHHc-------C
Confidence 566665555555444 3444556 56666554322122 12223 6666544332 4566666653 5
Q ss_pred eEEEEEeCCCCCCCCCCCHHHHHHHHHHHhhCCeEEE
Q 037587 190 VKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIV 226 (464)
Q Consensus 190 ~~~vil~~P~NPtG~~~s~~~l~~i~~~~~~~~~~lI 226 (464)
..+|+.+.|.. .-..+++.|.+.++..+
T Consensus 70 ~d~vi~~~~~~---------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 70 FDAVISAAPFF---------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp CSEEEECSCGG---------GHHHHHHHHHHTTCEEE
T ss_pred CCEEEECCCch---------hhHHHHHHHHHhCCCEE
Confidence 66677665421 23567777888887655
Done!