Your job contains 1 sequence.
>037594
IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMST
LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA
ILACQALHCLAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT
GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMM
RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNNN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037594
(295 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 596 5.1e-58 1
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 592 1.4e-57 1
TAIR|locus:2046258 - symbol:GGPS4 "geranylgeranyl pyropho... 583 1.2e-56 1
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 579 3.3e-56 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 567 6.1e-55 1
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 548 6.3e-53 1
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 545 1.3e-52 1
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 539 5.6e-52 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 503 3.7e-48 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 458 2.2e-43 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 458 2.2e-43 1
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 430 2.0e-40 1
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 430 2.0e-40 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 416 6.1e-39 1
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 373 2.2e-34 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 372 2.8e-34 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 372 2.8e-34 1
TAIR|locus:2121149 - symbol:GGR "geranylgeranyl reductase... 365 1.5e-33 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 353 2.9e-32 1
UNIPROTKB|Q9KTL2 - symbol:VC_0890 "Geranyltranstransferas... 330 7.9e-30 1
TIGR_CMR|VC_0890 - symbol:VC_0890 "geranyltranstransferas... 330 7.9e-30 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 325 2.7e-29 1
UNIPROTKB|Q5LX41 - symbol:ispA "Farnesyl diphosphate synt... 317 1.9e-28 1
TIGR_CMR|SPO_0248 - symbol:SPO_0248 "farnesyl diphosphate... 317 1.9e-28 1
TIGR_CMR|SO_1526 - symbol:SO_1526 "geranyltranstransferas... 309 1.3e-27 1
UNIPROTKB|Q83C74 - symbol:CBU_1255 "Dimethylallyltransfer... 292 8.4e-26 1
TIGR_CMR|CBU_1255 - symbol:CBU_1255 "geranyltranstransfer... 292 8.4e-26 1
TIGR_CMR|CJE_1816 - symbol:CJE_1816 "geranyltranstransfer... 259 2.6e-22 1
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 234 1.2e-19 1
TIGR_CMR|ECH_0455 - symbol:ECH_0455 "putative geranyltran... 215 1.2e-17 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 211 5.2e-17 1
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 206 1.2e-16 1
UNIPROTKB|Q2GL13 - symbol:ispA "Geranyltranstransferase" ... 198 7.7e-16 1
TIGR_CMR|APH_0329 - symbol:APH_0329 "geranyltranstransfer... 198 7.7e-16 1
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 185 5.8e-15 2
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 194 1.0e-14 1
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 194 1.0e-14 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 188 1.9e-13 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 186 5.0e-13 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 181 2.4e-12 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 179 4.2e-12 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 178 1.1e-11 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 175 1.5e-11 1
UNIPROTKB|Q2GD75 - symbol:NSE_0694 "Putative geranyltrans... 167 4.9e-11 1
TIGR_CMR|NSE_0694 - symbol:NSE_0694 "putative geranyltran... 167 4.9e-11 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 171 5.5e-11 1
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 171 1.0e-10 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 161 9.0e-10 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 157 2.9e-09 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 157 3.9e-09 1
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 154 7.0e-09 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 154 7.0e-09 1
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 149 2.1e-08 1
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 149 2.7e-08 1
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 139 4.2e-07 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 134 1.3e-06 1
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 134 1.7e-06 1
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 130 5.1e-06 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 130 5.1e-06 1
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 130 5.2e-06 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 91 5.7e-06 2
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 129 6.2e-06 1
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 120 0.00011 1
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 119 0.00011 1
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 119 0.00014 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 117 0.00024 1
UNIPROTKB|Q97W92 - symbol:gdS-2 "Hexaprenyl pyrophosphate... 113 0.00033 1
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 115 0.00040 1
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 113 0.00068 1
FB|FBgn0025373 - symbol:Fpps "Farnesyl pyrophosphate synt... 113 0.00069 1
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 125/289 (43%), Positives = 176/289 (60%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALDEA+ + P ++HEAMRYSL GGKR+ LC+A+CE++GG+
Sbjct: 76 FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGN 135
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q AM+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK++GE A+LA +L A
Sbjct: 136 QENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAF 195
Query: 133 QHXXXXXXXXXXS-----------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+H S ++G+EG+ AGQ+ DI G VSL L FIH HKT
Sbjct: 196 EHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKT 255
Query: 181 GKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
++R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 256 AALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 315
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+G++ +K+ A EL EAKQ+L FD +AAPL L ++I
Sbjct: 316 VVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYI 364
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 126/295 (42%), Positives = 174/295 (58%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGS 72
F Y KA +NEALD AV L P +HEA+RYSL GKR+ LCIA+CE++GG
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+SVA+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 133 QHXXXXXXXX----------XXSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHK 179
+H A+GS+G+ AGQ++D+ S G +V L L FIH HK
Sbjct: 173 EHLATSTAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHK 232
Query: 180 TGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T ++R F + +G+ +Q+ +DI+DV S E KT G+D
Sbjct: 233 TAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 292
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DK TYPKL+G++ SK A +L+++A ++L FD +R PL L N+I N
Sbjct: 293 LIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>TAIR|locus:2046258 [details] [associations]
symbol:GGPS4 "geranylgeranyl pyrophosphate synthase 4"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS;TAS] [GO:0004311
"farnesyltranstransferase activity" evidence=IGI;IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC006135 EMBL:AC005724 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2912871 EMBL:DQ446521 EMBL:L22347
IPI:IPI00546039 PIR:G84566 RefSeq:NP_179454.1 UniGene:At.66219
ProteinModelPortal:Q9SLG2 SMR:Q9SLG2 STRING:Q9SLG2
EnsemblPlants:AT2G18640.1 GeneID:816379 KEGG:ath:AT2G18640
TAIR:At2g18640 InParanoid:Q9SLG2 OMA:DIHANKT PhylomeDB:Q9SLG2
BioCyc:ARA:AT2G18640-MONOMER BioCyc:MetaCyc:AT2G18640-MONOMER
Genevestigator:Q9SLG2 Uniprot:Q9SLG2
Length = 372
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 120/291 (41%), Positives = 176/291 (60%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y KA+ IN ALDEA+PL P +H+AMRY+ L GGKR+ LC+A+CE++GG
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 133 QHXXXXXXXXX---------XSAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKT 180
+H ++G++G+ AGQ D++SEG E V L +L +IH HKT
Sbjct: 199 EHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKT 258
Query: 181 GKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G ++RNF + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 259 GSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDK 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYPK++G++ SK+ ++L +A++ L FD + PL L NFI +
Sbjct: 319 VAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIAN 369
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 121/291 (41%), Positives = 171/291 (58%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F+ + Y KA+ +N+AL+EA+P+ P +HEAMRY+ L GKR+ LC+ASCE++GG
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 142
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKV+GE AIL+ AL LA
Sbjct: 143 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 202
Query: 133 QHXXXXXXXXX---------XSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H ++G+ G+ AGQ MDI+SEG EV L L FIH HKT
Sbjct: 203 EHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKT 262
Query: 181 GKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 263 AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 322
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYPKL+G++ SK+ K L +A+Q L F + APL L FI +
Sbjct: 323 LAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIAN 373
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 121/292 (41%), Positives = 176/292 (60%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHXXXXXXXXXXS------------AVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H A+G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT ++R + + +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D+M K TYP+L+G++GS++ A++L EA+++L FDP++AAPL L ++I
Sbjct: 304 KDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYI 355
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 123/297 (41%), Positives = 174/297 (58%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F+ Y KAK +N+AL+EAVPL P + + EAMRY+L GKR+ LC+A+CE++GG
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AMS ACAIE+L ++I DDLPC+DND LRRGKP+NH VFGE+ AILA QAL LA
Sbjct: 108 QESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALA 167
Query: 132 MQHXXXXXXX---------XXXSAVGS-EGIAAGQIMDINSEG----KEVSLSELNFIHR 177
+Q V + EG+ AGQ D+ EG + L L FIH
Sbjct: 168 VQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHI 227
Query: 178 HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT R+R++ + +G+ +Q+ +D++DV S E KT G
Sbjct: 228 HKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 287
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D++ K TYP+L+G++ SK++A+ L EA++ L FD + APL L ++IV+ N
Sbjct: 288 KDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 116/292 (39%), Positives = 172/292 (58%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ ++ AL+ +VP P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+D+ DLRRGKP+NHKVFGE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 133 QHXXXXXX------------XXXXSAVGSEGIAAGQIMDINSEGK---EVSLSELNFIHR 177
+H A+G++G+ AGQ+ D+ S+G +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 178 HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT ++R +G+ +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D+M K TYP+L+G++ S++ A++L EA ++L FD + APL L ++I
Sbjct: 304 KDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYI 355
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 115/292 (39%), Positives = 172/292 (58%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ ++ AL+ +VPL P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 61 FDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 120
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+D+ DLRRGKP+NHK FGE A+LA AL LA
Sbjct: 121 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAF 180
Query: 133 QHXXXXXXXXXX------------SAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H A+G++G+ AGQ+ D+ S+G +V L L FIH
Sbjct: 181 EHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHL 240
Query: 178 HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT ++R + + +G+ +Q+ +DI+DV S + KT G
Sbjct: 241 HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 300
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D+M K TYP+L+G++ S++ A++L EA ++L FD +AAPL L ++I
Sbjct: 301 KDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYI 352
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 107/242 (44%), Positives = 141/242 (58%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA+ +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++
Sbjct: 71 PSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 130
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 131 GGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 190
Query: 130 LAMQHXXXXXXXXXXS-------------AVGSEGIAAGQIMDINSEG---KEVSLSELN 173
A +H S A+G+EG+ AGQ++DI+SEG +V L L
Sbjct: 191 FAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 250
Query: 174 FIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMRE 233
FIH HKT R+R F + +G+ +Q+ +DI+DV S +
Sbjct: 251 FIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 310
Query: 234 KT 235
KT
Sbjct: 311 KT 312
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/147 (37%), Positives = 87/147 (59%)
Query: 146 AVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXX 202
A+G+EG+ AGQ++DI+SEG +V L L FIH HKT
Sbjct: 220 AIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEI 279
Query: 203 XRMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKE 261
R+R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK TYPK++G++ S++ A++
Sbjct: 280 ERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEK 339
Query: 262 LIAEAKQELAYFDPTRAAPLDHLVNFI 288
L EA+ +L FD + APL L N+I
Sbjct: 340 LNREARDQLLGFDSDKVAPLLALANYI 366
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/282 (37%), Positives = 160/282 (56%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EAL+ +P P+ +H AMRYS+ GGKR+ L +A+C+ +GG ++A+ ACA+
Sbjct: 14 VDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------QHXXX 137
E++ T ++I DDLP +D+DD RRG+P+NHKVFGEA AILA AL A +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 138 XXXXXXXSAV-------GSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFXXXXXX 189
+ GS G+ GQ++D+ SEG KE+ L+ + +IH KTG
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 190 XXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPK 248
+ +G+ +G+A+Q+ +DI+D+ G+ E K G D R KATYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++G+ SK+ A+EL+ A + L+ FD RA PL + +IVS
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVS 294
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/282 (37%), Positives = 160/282 (56%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EAL+ +P P+ +H AMRYS+ GGKR+ L +A+C+ +GG ++A+ ACA+
Sbjct: 14 VDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------QHXXX 137
E++ T ++I DDLP +D+DD RRG+P+NHKVFGEA AILA AL A +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILISSPSYAAA 133
Query: 138 XXXXXXXSAV-------GSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFXXXXXX 189
+ GS G+ GQ++D+ SEG KE+ L+ + +IH KTG
Sbjct: 134 VGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIK 193
Query: 190 XXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPK 248
+ +G+ +G+A+Q+ +DI+D+ G+ E K G D R KATYP
Sbjct: 194 AGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++G+ SK+ A+EL+ A + L+ FD RA PL + +IVS
Sbjct: 254 VLGLAESKRRAQELLDLAIEALSPFDH-RADPLREIARYIVS 294
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 92/245 (37%), Positives = 137/245 (55%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DDLPC
Sbjct: 30 PNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPC 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HXXXXXXXXXXSA 146
+D+DDLRRGKP+NHKVFGEA A+LA L A Q A
Sbjct: 90 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKA 149
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMR 206
G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK ++
Sbjct: 150 AGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLL 209
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F KY+G+A+Q+ +DI+DV G+ E + + G D+ +K+TY L +D +K E IA+
Sbjct: 210 EFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAK 269
Query: 266 AKQEL 270
AK +
Sbjct: 270 AKDAI 274
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 92/245 (37%), Positives = 137/245 (55%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DDLPC
Sbjct: 30 PNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDDLPC 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HXXXXXXXXXXSA 146
+D+DDLRRGKP+NHKVFGEA A+LA L A Q A
Sbjct: 90 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLELAKA 149
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMR 206
G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK ++
Sbjct: 150 AGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEEKLL 209
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F KY+G+A+Q+ +DI+DV G+ E + + G D+ +K+TY L +D +K E IA+
Sbjct: 210 EFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAK 269
Query: 266 AKQEL 270
AK +
Sbjct: 270 AKDAI 274
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 98/291 (33%), Positives = 149/291 (51%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ A+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q------------HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKT 181
Query: 181 GKFXXXXXXXXXXXXXXXXXXXXR-MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G + ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+ +K++A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 98/286 (34%), Positives = 148/286 (51%)
Query: 25 KQINEALDEAV-PLPH---PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
KQ N+AL + PLP P + E M+Y +L GGKRL L A+ M G S + +
Sbjct: 12 KQANQALSRFIAPLPFQNTPVV--ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAP 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------ 133
A A+E + ++I DDLP +D+DDLRRG P+ H FGEA AILA AL LA
Sbjct: 70 AAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDAD 129
Query: 134 ------HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXX 187
SA G G+ GQ +D+++EGK V L L IHRHKTG
Sbjct: 130 MPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAA 189
Query: 188 XXXXXXXXXXXXXXXXRMRN-FGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKAT 245
+ + + + +G+A+Q+ +DI+DV+G + + ++ G D K+T
Sbjct: 190 VRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKST 249
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYF--DPTRAAPLDHLVNFIV 289
YP L+G++ ++K A++LI +A+Q L + L+ L ++I+
Sbjct: 250 YPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYII 295
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 91/262 (34%), Positives = 137/262 (52%)
Query: 25 KQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
K + E + +P +P ++H+AM YSL GGKRL L +A+ E G + + A
Sbjct: 12 KMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAV 71
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXX 141
+E L T ++I DDLP +DNDD RRGKP+NHKVFGEA AILA AL A +
Sbjct: 72 GVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQ 131
Query: 142 XXXS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXX 189
+ A GSEG+ AGQ++D++S + L +IH +KT +
Sbjct: 132 GIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLI 191
Query: 190 XXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+ ++G+++G+A+Q+ +D++DV+G ++ + G D K TY
Sbjct: 192 AGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVS 251
Query: 249 LVGIDGSKKHAKELIAEAKQEL 270
L GI+ +KK A+E I AK L
Sbjct: 252 LFGIEETKKRAEEEINAAKNVL 273
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
Identities = 91/262 (34%), Positives = 137/262 (52%)
Query: 25 KQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
K + E + +P +P ++H+AM YSL GGKRL L +A+ E G + + A
Sbjct: 12 KMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAV 71
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXX 141
+E L T ++I DDLP +DNDD RRGKP+NHKVFGEA AILA AL A +
Sbjct: 72 GVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQ 131
Query: 142 XXXS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXX 189
+ A GSEG+ AGQ++D++S + L +IH +KT +
Sbjct: 132 GIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLI 191
Query: 190 XXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+ ++G+++G+A+Q+ +D++DV+G ++ + G D K TY
Sbjct: 192 AGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVS 251
Query: 249 LVGIDGSKKHAKELIAEAKQEL 270
L GI+ +KK A+E I AK L
Sbjct: 252 LFGIEETKKRAEEEINAAKNVL 273
>TAIR|locus:2121149 [details] [associations]
symbol:GGR "geranylgeranyl reductase" species:3702
"Arabidopsis thaliana" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0004311 "farnesyltranstransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00723 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:AL161593 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 EMBL:AL035540
HOGENOM:HOG000009101 KO:K13789 GO:GO:0051501 EMBL:L40577
EMBL:AY057734 EMBL:AF324662 EMBL:AF326906 EMBL:AF339725
EMBL:AF372915 EMBL:AY086829 IPI:IPI00540165 PIR:T05674
RefSeq:NP_195558.1 UniGene:At.20379 ProteinModelPortal:Q39108
SMR:Q39108 IntAct:Q39108 STRING:Q39108 PaxDb:Q39108 PRIDE:Q39108
EnsemblPlants:AT4G38460.1 GeneID:830002 KEGG:ath:AT4G38460
TAIR:At4g38460 InParanoid:Q39108 OMA:SAMRYAV PhylomeDB:Q39108
ProtClustDB:CLSN2685424 Genevestigator:Q39108 GermOnline:AT4G38460
Uniprot:Q39108
Length = 326
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 98/276 (35%), Positives = 136/276 (49%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEA+P+ HPA ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGG 104
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D +RRGKPSNH V+G AILA AL LA
Sbjct: 105 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLA 164
Query: 132 MQHXXXXX-------------XXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QH VGS G+AAGQ +D+ EG LS F+
Sbjct: 165 FQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FVQEK 219
Query: 179 KTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G +R +G+ VGM YQ+ +DI + +K D
Sbjct: 220 KFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITE-------DKKKSYD 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
+K G + A+EL +AK+EL FD
Sbjct: 273 GGAEK----------GMMEMAEELKEKAKKELQVFD 298
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 87/250 (34%), Positives = 125/250 (50%)
Query: 19 YKALKAKQINEALDEAVPL-----P--HPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMI 69
Y KAK IN+ALD ++PL P P + +H+AMRY+L PGGKR+ LC+ +CE++
Sbjct: 35 YMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELV 94
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ ++I DDLPC+D+D LRRGKP+NHKVFGE T+ILA AL
Sbjct: 95 GGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRS 154
Query: 130 LAMQHXXXXXXXXXXS------------AVGSEGIAAGQIMDINSEGKEVSLS--ELNFI 175
LA++ S AVG+EG+ AGQ D+ E EL ++
Sbjct: 155 LAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYL 214
Query: 176 HRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT 235
K + Y ++ + DV+ + E+
Sbjct: 215 ELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEEL 274
Query: 236 GRDMMRDKAT 245
G+ +D T
Sbjct: 275 GKTAGKDLIT 284
Score = 216 (81.1 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 49/154 (31%), Positives = 81/154 (52%)
Query: 146 AVGSEGIAAGQIMDINSE-----GKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXX 200
AVG+EG+ AGQ D+ E ++ L L +H HKT
Sbjct: 183 AVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDE 242
Query: 201 XXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHA 259
R++++ + VG+ +Q+ +D++D S E KT G+D++ K TYPK++G+D ++++A
Sbjct: 243 EIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYA 302
Query: 260 KELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
K L EA++ L FD + PL L ++IV N
Sbjct: 303 KRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 336
Score = 45 (20.9 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 38 PHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
P +++ AMR P +RL S++ + E I ++ A S+ A++
Sbjct: 3 PRYSLILSAMRLIRPSNRRL-SSIASSDSEFISYMKNKAKSINKALD 48
>UNIPROTKB|Q9KTL2 [details] [associations]
symbol:VC_0890 "Geranyltranstransferase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 92/283 (32%), Positives = 140/283 (49%)
Query: 28 NEALDEAVP-LPHPAI-LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
N+ LD+ + +P + L EAMRY L GGKR L + +M+G S + A A+E
Sbjct: 13 NQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVE 72
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------ 132
+ ++I DDLP +D+D+LRRGKP+ H F EATAIL AL LA
Sbjct: 73 CIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAG 132
Query: 133 QHXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXX 192
+ A G++G+ GQ +D+ +E + +SL EL IHR+KTG
Sbjct: 133 ETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGA 192
Query: 193 XXXXXXXXXXX-RMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
+ + + VG+A+Q+ +DI+D+I E K G D +K+TYP L+
Sbjct: 193 LAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALL 252
Query: 251 GIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G++G+++ A L+ EA L P L+ ++V N
Sbjct: 253 GLEGAQQKAHTLLQEALLALEAI-PYNTEHLEEFARYVVERKN 294
>TIGR_CMR|VC_0890 [details] [associations]
symbol:VC_0890 "geranyltranstransferase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004337 KO:K00795 OMA:DLISEHK PIR:A82267
RefSeq:NP_230537.1 PDB:3P8R PDBsum:3P8R ProteinModelPortal:Q9KTL2
SMR:Q9KTL2 DNASU:2614119 GeneID:2614119 KEGG:vch:VC0890
PATRIC:20080878 ProtClustDB:CLSK874144 Uniprot:Q9KTL2
Length = 294
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 92/283 (32%), Positives = 140/283 (49%)
Query: 28 NEALDEAVP-LPHPAI-LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
N+ LD+ + +P + L EAMRY L GGKR L + +M+G S + A A+E
Sbjct: 13 NQQLDQWLNRIPFQTLPLIEAMRYGLLLGGKRARPYLVYITGQMLGCELSDLDTPASAVE 72
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------ 132
+ ++I DDLP +D+D+LRRGKP+ H F EATAIL AL LA
Sbjct: 73 CIHAYSLIHDDLPAMDDDELRRGKPTCHIQFDEATAILTGDALQTLAFTILAEGDLSAAG 132
Query: 133 QHXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXX 192
+ A G++G+ GQ +D+ +E + +SL EL IHR+KTG
Sbjct: 133 ETQRVAMLQALAEASGAQGMCLGQALDLAAENRLISLEELETIHRNKTGALMRCAIRLGA 192
Query: 193 XXXXXXXXXXX-RMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
+ + + VG+A+Q+ +DI+D+I E K G D +K+TYP L+
Sbjct: 193 LAAGEKGRAMLPHLDRYAEAVGLAFQVQDDILDIISDTETLGKPQGSDQELNKSTYPALL 252
Query: 251 GIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G++G+++ A L+ EA L P L+ ++V N
Sbjct: 253 GLEGAQQKAHTLLQEALLALEAI-PYNTEHLEEFARYVVERKN 294
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 86/282 (30%), Positives = 139/282 (49%)
Query: 24 AKQINEALDEAVP-LPHP-AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A ++ ALD+ +P P A L AMR++ L GKR+ + + M G S+ + A
Sbjct: 12 ADKVTVALDQLIPPASGPEANLMRAMRHAALANGKRMRPFFVLETGAMFGASEKSLLRTA 71
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXX 140
A+E + +++ DDLPC+D+DD RRG+P+ HK F EATA+LA AL LA +
Sbjct: 72 AALECIHCYSLVHDDLPCMDDDDFRRGQPTVHKAFDEATAVLAGDALLTLAFKILASSET 131
Query: 141 XXX-----------XSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXX 189
A G+ G+ GQ++D+ E L+ + + R KTG
Sbjct: 132 HDDPAVRVLLIERLADAAGARGMVGGQMIDMLEEESPRDLNTITRMQRLKTGALISYALE 191
Query: 190 XXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
+ F +G+AYQ+ +DI+D G + K +D KA +
Sbjct: 192 AGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSKDKDAGKANFVT 251
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
L+G+DG+++ + L A+AK+ LA F +A L H V+++++
Sbjct: 252 LLGVDGARQRVRLLAAQAKEHLAIFRD-KAHILLHSVDYVLN 292
>UNIPROTKB|Q5LX41 [details] [associations]
symbol:ispA "Farnesyl diphosphate synthase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 87/291 (29%), Positives = 139/291 (47%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVA 76
+E A A I + D + P + AM ++ GGKRL L + S + ++ A
Sbjct: 3 HERLAQDAALIQRSFDTVLGALEPLDITRAMAWTTEGGKRLRGFLVLESARLHDVDEARA 62
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ--- 133
+ A AIE L +++ DDLPC+D+DDLRRG+P+ H + E TA+LA ALH LA +
Sbjct: 63 IWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCT 122
Query: 134 -------HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXX 186
A G+ G+ GQ +DI +E L+ L+ I R + GK
Sbjct: 123 RPEVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLT-LDQITRLQAGKTGAL 181
Query: 187 XXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD---- 242
+R + + +G+A+Q+ +DI+DV G E K G+ + +D
Sbjct: 182 IEWAAAAGAVLAGADPDPLRQYARALGLAFQIADDILDVEGDAE---KAGKRLQKDAGAG 238
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KAT+ L+G+D +K A++L+ + L + RA L F+++ N
Sbjct: 239 KATFVSLLGLDAAKARARDLVDQGCAALDGYGE-RAGTLKEAARFVIARDN 288
>TIGR_CMR|SPO_0248 [details] [associations]
symbol:SPO_0248 "farnesyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K00795
RefSeq:YP_165512.1 ProteinModelPortal:Q5LX41 GeneID:3196371
KEGG:sil:SPO0248 PATRIC:23373747 OMA:ANTETHG
ProtClustDB:CLSK2767208 Uniprot:Q5LX41
Length = 288
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 87/291 (29%), Positives = 139/291 (47%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVA 76
+E A A I + D + P + AM ++ GGKRL L + S + ++ A
Sbjct: 3 HERLAQDAALIQRSFDTVLGALEPLDITRAMAWTTEGGKRLRGFLVLESARLHDVDEARA 62
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ--- 133
+ A AIE L +++ DDLPC+D+DDLRRG+P+ H + E TA+LA ALH LA +
Sbjct: 63 IWPATAIEALHAYSLVHDDLPCMDDDDLRRGRPTAHVKWDEGTAVLAGDALHSLAFELCT 122
Query: 134 -------HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXX 186
A G+ G+ GQ +DI +E L+ L+ I R + GK
Sbjct: 123 RPEVGTAETRATLALTLAQAAGARGMVLGQALDIAAETAPKPLT-LDQITRLQAGKTGAL 181
Query: 187 XXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD---- 242
+R + + +G+A+Q+ +DI+DV G E K G+ + +D
Sbjct: 182 IEWAAAAGAVLAGADPDPLRQYARALGLAFQIADDILDVEGDAE---KAGKRLQKDAGAG 238
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KAT+ L+G+D +K A++L+ + L + RA L F+++ N
Sbjct: 239 KATFVSLLGLDAAKARARDLVDQGCAALDGYGE-RAGTLKEAARFVIARDN 288
>TIGR_CMR|SO_1526 [details] [associations]
symbol:SO_1526 "geranyltranstransferase" species:211586
"Shewanella oneidensis MR-1" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
OMA:MEFAHAV KO:K00795 RefSeq:NP_717143.1 ProteinModelPortal:Q8EGR8
GeneID:1169335 KEGG:son:SO_1526 PATRIC:23522694
ProtClustDB:CLSK906310 Uniprot:Q8EGR8
Length = 293
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 85/259 (32%), Positives = 122/259 (47%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
KQ L++ P A+ H A L GGKR+ L + +M G + A AIE
Sbjct: 18 KQRFSTLEDTAPQLKAAMTHGA----LLGGKRIRPFLVYSVGQMFGVPLEKLDACAAAIE 73
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------- 133
+ ++I DDLP +D+D LRRG+P+ H F EATAILA AL LA +
Sbjct: 74 CIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGITS 133
Query: 134 HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXX 193
A G G+ GQ +D+ S K + L L +H KTG
Sbjct: 134 EQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKTGALISCAVELALI 193
Query: 194 XXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGI 252
M F VG+A+Q+ +DI+D+I + E + + G D +K+T+P+L+G+
Sbjct: 194 AANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGL 253
Query: 253 DGSKKHAKELIAEAKQELA 271
G+K A +LI EA LA
Sbjct: 254 QGAKDTATQLIQEALSALA 272
>UNIPROTKB|Q83C74 [details] [associations]
symbol:CBU_1255 "Dimethylallyltransferase" species:227377
"Coxiella burnetii RSA 493" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
KO:K00795 RefSeq:NP_820249.1 ProteinModelPortal:Q83C74
GeneID:1209160 KEGG:cbu:CBU_1255 PATRIC:17931243 OMA:MACAVEC
ProtClustDB:CLSK914646 BioCyc:CBUR227377:GJ7S-1240-MONOMER
Uniprot:Q83C74
Length = 267
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 80/254 (31%), Positives = 117/254 (46%)
Query: 25 KQINEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++IN L +P P LHEAM Y+ + GGKR+ A+ + + AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----HXXX 137
AIEL+ +++ DDLP +D+DD RRGKPS HK F EATAIL AL CLA +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKNI 128
Query: 138 XXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK-FXXXXXXXXXXXXX 196
+A GS G+A GQ +D+ + KE + ++ +HR KTG F
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGC 188
Query: 197 XXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKATYPKLVGIDGSK 256
++R G VG+ +Q +D+ D E R + L ++G+
Sbjct: 189 LDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKIPLINRIGVLFNQVEKLLNELEGNN 248
Query: 257 KHAKELIAEAKQEL 270
+ELI K +
Sbjct: 249 SFLQELIHFLKSSI 262
>TIGR_CMR|CBU_1255 [details] [associations]
symbol:CBU_1255 "geranyltranstransferase, putative"
species:227377 "Coxiella burnetii RSA 493" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337
GO:GO:0045337 KO:K00795 RefSeq:NP_820249.1
ProteinModelPortal:Q83C74 GeneID:1209160 KEGG:cbu:CBU_1255
PATRIC:17931243 OMA:MACAVEC ProtClustDB:CLSK914646
BioCyc:CBUR227377:GJ7S-1240-MONOMER Uniprot:Q83C74
Length = 267
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 80/254 (31%), Positives = 117/254 (46%)
Query: 25 KQINEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++IN L +P P LHEAM Y+ + GGKR+ A+ + + AC
Sbjct: 9 ERINHKLGSILPDIRQTPQRLHEAMTYAVMSGGKRIRPLFTYATGFSFEVDPAQIDNAAC 68
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----HXXX 137
AIEL+ +++ DDLP +D+DD RRGKPS HK F EATAIL AL CLA +
Sbjct: 69 AIELMHCYSLVHDDLPAMDDDDFRRGKPSCHKAFDEATAILTGDALQCLAFEVLARDKNI 128
Query: 138 XXXXXXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK-FXXXXXXXXXXXXX 196
+A GS G+A GQ +D+ + KE + ++ +HR KTG F
Sbjct: 129 RLINVLANACGSLGMAGGQQLDLEFKNKEATPEQIEIVHRLKTGALFSTAIELGALAAGC 188
Query: 197 XXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKATYPKLVGIDGSK 256
++R G VG+ +Q +D+ D E R + L ++G+
Sbjct: 189 LDEKRLQKLRKLGATVGLIFQWQDDLADQTVEDEKIPLINRIGVLFNQVEKLLNELEGNN 248
Query: 257 KHAKELIAEAKQEL 270
+ELI K +
Sbjct: 249 SFLQELIHFLKSSI 262
>TIGR_CMR|CJE_1816 [details] [associations]
symbol:CJE_1816 "geranyltranstransferase" species:195099
"Campylobacter jejuni RM1221" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 OMA:DLISEHK RefSeq:YP_179786.1 PDB:3NPK
PDBsum:3NPK ProteinModelPortal:Q5HSE9 STRING:Q5HSE9 GeneID:3232443
KEGG:cjr:CJE1816 PATRIC:20045454 ProtClustDB:CLSK872468
BioCyc:CJEJ195099:GJC0-1850-MONOMER Uniprot:Q5HSE9
Length = 281
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 75/259 (28%), Positives = 122/259 (47%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVIQDDL 96
HP +EA+ L GGK + L ++ + + A+ +A A+E + T ++I DDL
Sbjct: 22 HP-FFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDL 80
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHC---LAMQHXXXXXXX------XXXSAV 147
P +DN D RRG P+ HK + E TAIL AL+ L + H
Sbjct: 81 PAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNA 140
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRN 207
G G+ GQ +D E K +SL+EL F+H HKT + ++
Sbjct: 141 GLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYK 200
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
G +G+ +Q+ +DI+DV S E K T D+ K ++ L+G++ + K + L+ E
Sbjct: 201 LGLKLGLIFQINDDIIDVTTSQEQSGKPTNNDI--HKNSFVNLLGLEQAIKTKENLLNEC 258
Query: 267 KQELAYFDPTRAAPLDHLV 285
+Q+L + A + +L+
Sbjct: 259 EQDLEKLNEKLAQMIQNLI 277
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 64/177 (36%), Positives = 92/177 (51%)
Query: 25 KQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMA 80
++IN+ L E + + P ++ EAMRY L GGKR+ L + E + + ++A
Sbjct: 12 ERINDFLAAKLEGLTINDPKLI-EAMRYGLLIGGKRMRPYLAYITGEAVSADLNDIDAVA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----HXX 136
A+E + +++ DDLP +D+DDLRRGKP+ HK F EATAILA AL LA H
Sbjct: 71 GALECIHAYSLLHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQTLAFDILANHTF 130
Query: 137 XXXXXXXX------------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
A G +G+ GQ +D+ + GK +SL EL +H KTG
Sbjct: 131 SMNQSTAGMPIQVKLIQQLVKASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTG 187
Score = 186 (70.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 43/146 (29%), Positives = 73/146 (50%)
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXX-XXXXXXXXXXR 204
A G +G+ GQ +D+ + GK +SL EL +H KTG
Sbjct: 152 ASGYQGMCGGQALDLAATGKNISLGELEVLHSLKTGALLEASVLMPAMCSGQVTREYKII 211
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ + + +G+AYQ+ +DI+D+ + E + + G D+ +K+TYP L+G+ G++ A+ L+
Sbjct: 212 LSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVGSDIAANKSTYPALLGLQGAQDKAENLL 271
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIV 289
+A Q L+ P L FIV
Sbjct: 272 QQALQALSRL-PYNTQSLADFATFIV 296
>TIGR_CMR|ECH_0455 [details] [associations]
symbol:ECH_0455 "putative geranyltranstransferase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 OMA:ICKDISK RefSeq:YP_507273.1
ProteinModelPortal:Q2GH10 STRING:Q2GH10 GeneID:3926960
KEGG:ech:ECH_0455 PATRIC:20576384 ProtClustDB:CLSK749162
BioCyc:ECHA205920:GJNR-456-MONOMER Uniprot:Q2GH10
Length = 267
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 62/219 (28%), Positives = 105/219 (47%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
+ + +L KQ L+ +P + IL +MRYS+ GK + L AS ++ +
Sbjct: 1 MKHHSSLLVKQ----LESILPENNQDILLTSMRYSMFAPGKHIRPFLVNASAQIFNVNVD 56
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
+ ++ A+E++ ++I DDLP +DN+++RRG+ S+HK F EA AIL AL LA +
Sbjct: 57 RILPVSAAVEIIHVYSLIHDDLPGIDNENIRRGQASSHKKFNEAIAILTGDALLTLAFEI 116
Query: 135 XXXXXXX---------XXXSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXX 185
A+G +G+ GQI+D + K+ + ++ IH KT +F
Sbjct: 117 LSTIDESPFIRCCMIKALAKALGYQGMIQGQILDTETIAKDTN--DIQAIHVLKTAQFFS 174
Query: 186 XXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVD 224
+ N+G +G A+Q+ +DI D
Sbjct: 175 VACELGGILGNASNIELNALANYGLNLGHAFQVKDDIAD 213
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 211 (79.3 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 64/245 (26%), Positives = 113/245 (46%)
Query: 27 INEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIG--------------- 70
+NEA+ E +P+ P L+ A RY L GGKRL T+ + + E +
Sbjct: 18 VNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADVEPLSADYRQFPSL 77
Query: 71 -GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G + +S A +IE++ + +I DD+ +D+DDLRRG P+ H+ + TAILA L+
Sbjct: 78 PGDEVDVLSAAVSIEVIQSFTLIHDDI--MDDDDLRRGVPAVHREYDLETAILAGDTLYS 135
Query: 130 LAMQHXXXXXXXXXXSAVGSEGIAA-------GQIMDINSEGK-EVSLSELNFIHRHKTG 181
A ++ S + +A GQ +D++ E + +V+ E + KT
Sbjct: 136 KAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDVTTEEYLEMVEFKTA 195
Query: 182 KFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMM 240
+ +G +G A+Q+ +D++D+ S E+ ++ G D++
Sbjct: 196 VLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELGKQRGSDLV 255
Query: 241 RDKAT 245
+K T
Sbjct: 256 ENKRT 260
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 206 (77.6 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 69/245 (28%), Positives = 112/245 (45%)
Query: 53 GGKRLMSTLCIASCEMIGG--SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPS 110
GGKRL + + + M+GG +++ A+ +A +IE T ++I DD+ +D D++RRG P+
Sbjct: 29 GGKRLRPLITLLTARMLGGLEAEARAIPLAASIETAHTFSLIHDDI--MDRDEVRRGVPT 86
Query: 111 NHKVFGEATAILACQALHCLA-----------MQHXXXXXXXXXXSAVGSEGIAAGQIMD 159
H V+G+ AILA LH A M H S + I+ GQ D
Sbjct: 87 THVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSEAAIQ-ISRGQAYD 145
Query: 160 -INSEGKEVSLSE-LNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQ 217
+ E +V +++ LN + R KTG M G G+A+Q
Sbjct: 146 MLFEETWDVDVADYLNMV-RLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQ 204
Query: 218 LWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT 276
+ +DI+ VIG P++ K D+ R K T + + K +E++ + + D
Sbjct: 205 IRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAV--KKAGRREIVDLIGPKASEDDLK 262
Query: 277 RAAPL 281
RAA +
Sbjct: 263 RAASI 267
>UNIPROTKB|Q2GL13 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 60/221 (27%), Positives = 99/221 (44%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
+V ++ L K++ + ++ V A L +A+ Y LP GK L + L + + G S
Sbjct: 9 RVKDFSNLVGKELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSI 68
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ + AIE+L + +++ DDLP +DN RRGK S H GEA A+L AL L +
Sbjct: 69 ERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE 128
Query: 134 HXXXXXXXXX---------XSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFX 184
A G G+ AGQ +D+ + E SL + IH+ KT +
Sbjct: 129 LLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLF 186
Query: 185 XXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDV 225
+ ++G+ +G A+Q +D+ D+
Sbjct: 187 SAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDI 227
>TIGR_CMR|APH_0329 [details] [associations]
symbol:APH_0329 "geranyltranstransferase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008299 "isoprenoid biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 OMA:DIHANKT KO:K00795
RefSeq:YP_504938.1 ProteinModelPortal:Q2GL13 STRING:Q2GL13
GeneID:3930764 KEGG:aph:APH_0329 PATRIC:20949240
ProtClustDB:CLSK747370 BioCyc:APHA212042:GHPM-359-MONOMER
Uniprot:Q2GL13
Length = 280
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 60/221 (27%), Positives = 99/221 (44%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
+V ++ L K++ + ++ V A L +A+ Y LP GK L + L + + G S
Sbjct: 9 RVKDFSNLVGKELTKLIETQVTGGPAAGLVDAIGYCILPPGKCLRAFLASSVAQTFGVSI 68
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ + AIE+L + +++ DDLP +DN RRGK S H GEA A+L AL L +
Sbjct: 69 ERTLPLCLAIEVLHSYSLVHDDLPSMDNAPTRRGKNSCHIEHGEALALLTGDALLTLTFE 128
Query: 134 HXXXXXXXXX---------XSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFX 184
A G G+ AGQ +D+ + E SL + IH+ KT +
Sbjct: 129 LLSSMDESCTVKCAIIRVISDACGHRGMVAGQALDMGN--LEPSLEAVKQIHKLKTARLF 186
Query: 185 XXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDV 225
+ ++G+ +G A+Q +D+ D+
Sbjct: 187 SAACESGAILAEVSTANQQALASYGETLGCAFQAKDDLCDI 227
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 185 (70.2 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 55/245 (22%), Positives = 112/245 (45%)
Query: 20 KALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVA 76
K L A ++ E V H + + + +++ L GGKR + +A+C M+G + +
Sbjct: 2 KLLVASELQEMESLIVKQRHSEVQLIADIIQHLILSGGKRTRPVMLLAACGMLGCTDARR 61
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXX 136
+ +A AIE L + ++ DD+ +D D+RRG + + ++G +IL L A Q
Sbjct: 62 IVVAAAIEFLHSATLLHDDV--VDKSDMRRGVETANSIWGNKASILVGDFLFATAFQWIV 119
Query: 137 XXXXXXXXSAVGSEG--IAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXX 193
S + + I +G++ ++S ++S ++ I KT
Sbjct: 120 SCNSIQLLSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAV 179
Query: 194 XXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGI 252
+R++G G+ +Q+ +DI+D + E+ ++T D++ K T P ++
Sbjct: 180 LHDVGTLQRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAY 239
Query: 253 DGSKK 257
+G+ +
Sbjct: 240 EGASE 244
Score = 45 (20.9 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 252 IDGSKKHAKELIAEAKQELAYF-DPTRAAPLDHLVNFIVS 290
I+ S AKE IA A+++L++F D L +L+N V+
Sbjct: 274 IEKSVGLAKEYIAIAEKQLSHFPDSAYKQKLLNLLNSAVN 313
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 194 (73.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 18 EYKALKAKQINEA--LDEAVPLP---HPAILHEAMRYSLPGG-KRLMSTLCIASCEMIGG 71
++KA++A N+ ++E + +++++ Y + GG KRL L + S + +G
Sbjct: 27 DFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGY 86
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S + A IE + T ++ DD+ +D DLRRGK + + FG A ++L ++ +
Sbjct: 87 QGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRS 144
Query: 132 MQHXXXXXXXXXXSAVGS--EGIAAGQIMDI-NSEGKEVSLSELNFIHRHKTGKFXXXXX 188
Q + IA G++ + N + + + + KT +
Sbjct: 145 FQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAAT 204
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYP 247
M+N+GKY+G A+QL +D++D EM + G D+ K T P
Sbjct: 205 QIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLP 264
Query: 248 KLVGIDGSKKHAKELIAEA 266
L + +I EA
Sbjct: 265 LLYAMQHGNPEQAAMIREA 283
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 194 (73.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 18 EYKALKAKQINEA--LDEAVPLP---HPAILHEAMRYSLPGG-KRLMSTLCIASCEMIGG 71
++KA++A N+ ++E + +++++ Y + GG KRL L + S + +G
Sbjct: 27 DFKAIQALTANDMAKVNETIHAQLNSDVSLINQLGFYIISGGGKRLRPLLAVLSAKALGY 86
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S + A IE + T ++ DD+ +D DLRRGK + + FG A ++L ++ +
Sbjct: 87 QGSHHTTAAAFIEFIHTATLLHDDV--VDESDLRRGKATANAAFGNAASVLVGDFIYTRS 144
Query: 132 MQHXXXXXXXXXXSAVGS--EGIAAGQIMDI-NSEGKEVSLSELNFIHRHKTGKFXXXXX 188
Q + IA G++ + N + + + + KT +
Sbjct: 145 FQMMTELGSMKILKLMSDAVNVIAEGEVQQLMNCNDPDTTEASYMQVIYSKTARLFEAAT 204
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYP 247
M+N+GKY+G A+QL +D++D EM + G D+ K T P
Sbjct: 205 QIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDEMGKNVGDDLAEGKPTLP 264
Query: 248 KLVGIDGSKKHAKELIAEA 266
L + +I EA
Sbjct: 265 LLYAMQHGNPEQAAMIREA 283
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 188 (71.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 51/228 (22%), Positives = 102/228 (44%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H ++ E +++ + GGKR+ + C+M+ + + +A AIEL+ ++ DD+
Sbjct: 34 HITLITEIVQHLIKSGGKRIRPIIFFIICKMLNCNNENKVPIAAAIELIHNATLLHDDV- 92
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVG--SEGIAAG 155
+D +LRRG+ +++ ++G +IL L ++ Q S + S+ + G
Sbjct: 93 -IDESELRRGEKTSNVIWGNKASILVGDFLLAISFQWLIKCKNLNILSILSQASKDVIVG 151
Query: 156 QIMD-INSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGM 214
++ I+S +S + I KT ++NFG G+
Sbjct: 152 EVQQMISSHNINISKEKYIEIISAKTAALFSATCESAANLAQTSNEEKEALKNFGNNFGI 211
Query: 215 AYQLWNDIVDVIGSPEM-REKTGRDMMRDKATYPKLVGIDGSKKHAKE 261
++Q+ +DI+D S E +K G D++ K T P ++ + K+
Sbjct: 212 SFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNATSKEKK 259
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 186 (70.5 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 62/238 (26%), Positives = 100/238 (42%)
Query: 54 GKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHK 113
GK + L A+ GG A ++ A+EL+ ++ DD+ +D D RRG+P+
Sbjct: 69 GKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDV--MDGDATRRGRPTVWS 126
Query: 114 VFGEATAILACQALHCLAMQHXXXXXXX-XXXSAV-----GSEGIAAGQIMDINSEGK-E 166
V+G AIL ALH A++ A+ + GQ D EG+ E
Sbjct: 127 VWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQPE 186
Query: 167 VSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVI 226
V++ + + KT + FG +G+A+Q +D++ +
Sbjct: 187 VTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIW 246
Query: 227 GSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIA--EAKQELAYFDPTRAAPL 281
G P + K G D+ R KAT P + ++ + A EL A +A + D RA L
Sbjct: 247 GDPGVTGKPVGNDLARRKATLPVVAALNSRSEAATELAALYQAPAAMTASDVERATAL 304
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 181 (68.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 49/221 (22%), Positives = 96/221 (43%)
Query: 53 GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNH 112
GGKRL L + + + + +A IE + T +++ DD+ +D LRRG+ + +
Sbjct: 51 GGKRLRPLLSVLAARAVDYQGEAHLKLAAIIEFIHTASLLHDDV--VDESTLRRGRETAN 108
Query: 113 KVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVG--SEGIAAGQIMDI-NSEGKEVSL 169
+FG + ++L L+ + Q + + +A G+++ + N + +
Sbjct: 109 ALFGNSASVLVGDFLYTRSFQMMTELDSMRVLRVLADTTNVLAEGEVLQLMNCNDPDTTE 168
Query: 170 SELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-S 228
+ KT K + ++GKY+G A+QL +D++D S
Sbjct: 169 ESYMRVIYCKTAKLFEAATLLAAVLAGASPEQETALGDYGKYLGTAFQLTDDLLDYTADS 228
Query: 229 PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
E+ + G D+ K T P + I + K+LI +A ++
Sbjct: 229 DELGKNIGDDLAEGKPTLPLIYAIAHGTEEEKQLIRQAIEQ 269
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 179 (68.1 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 57/262 (21%), Positives = 116/262 (44%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGG-KRLMSTLCIASCEMIGGSQ 73
++NE A +N A+ E + ++++ Y + GG KR+ + + + +G
Sbjct: 5 KINELTAQDMAGVNAAILEQLN-SDVQLINQLGYYIVSGGGKRIRPMIAVLAARAVGYEG 63
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ +++A IE + T ++ DD+ +D D+RRGK + + FG A ++L ++ A Q
Sbjct: 64 NAHVTIAALIEFIHTATLLHDDV--VDESDMRRGKATANAAFGNAASVLVGDFIYTRAFQ 121
Query: 134 HXXXXXXXXXXSAVGSEG---IAAGQIMDINSEGKEVSLSELNFIH--RHKTGKFXXXXX 188
+ SE IA G+++ + + + ++E N++ KT +
Sbjct: 122 MMTSLGSLKVLEVM-SEAVNVIAEGEVLQLMNVN-DPDITEENYMRVIYSKTARLFEAAA 179
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYP 247
++++G+Y+G A+QL +D++D E K G D+ K T P
Sbjct: 180 QCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLP 239
Query: 248 KLVGIDGSKKHAKELIAEAKQE 269
L + ++I A ++
Sbjct: 240 LLHAMHHGTPEQAQMIRTAIEQ 261
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 178 (67.7 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 62/256 (24%), Positives = 110/256 (42%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCI----ASCEMIGGSQ 73
E A+ + +N+ L V +P ++ A + GGKR+ L A+ E+ G +
Sbjct: 89 ELVAVDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKE 148
Query: 74 SVA--MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+A IE++ T ++I DD+ LD D+RRGK + H++FG A+LA + A
Sbjct: 149 LTTEHRRLAEIIEMIHTASLIHDDV--LDESDMRRGKETVHELFGTRVAVLAGDFMFAQA 206
Query: 132 MQHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFXXXXX 188
+ + + A+G+I +S + L E +KT
Sbjct: 207 SWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAAST 266
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYP 247
+M FGK +G+++Q+ +DI+D S E K G D+ + T P
Sbjct: 267 KGAAIFSRVEPDVTEQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAP 326
Query: 248 KLVGIDGSKKHAKELI 263
+ ++ + +E+I
Sbjct: 327 VIFALEREPR-LREII 341
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 175 (66.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 52/220 (23%), Positives = 98/220 (44%)
Query: 53 GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNH 112
GGKR+ L + + + +A IE + T ++ DD+ +D ++RRG+ + +
Sbjct: 47 GGKRMRPMLTVLAARAFAYQGDKHLEIAAIIEFIHTATLLHDDV--VDESNMRRGRETAN 104
Query: 113 KVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVGSEG---IAAGQIMDINSEGKEVSL 169
+FG + ++L L+ + Q + SE +A G+++ + + + S
Sbjct: 105 ALFGNSASVLVGDFLYTRSFQMMTKLGDMRIMDIL-SEATNIVAEGEVLQLMN-CNDAST 162
Query: 170 SELNFIH--RHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG 227
+E +++ KT K M ++GKY+G A+QL +DI+D
Sbjct: 163 TEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMADYGKYLGTAFQLVDDIMDYTA 222
Query: 228 -SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+ EM + G D+ K T P L + + ++LI EA
Sbjct: 223 DAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKEA 262
>UNIPROTKB|Q2GD75 [details] [associations]
symbol:NSE_0694 "Putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 167 (63.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 62/210 (29%), Positives = 91/210 (43%)
Query: 20 KALKAKQ-INEALDEAVPL-PHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGSQSVA 76
K KA + I E L E + L P L +A+RYSL + L + +
Sbjct: 6 KLQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDT 65
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXX 136
+ +A AIE++ + ++I DDLP LDN D RR +P+ H F E+TAILA AL LA Q
Sbjct: 66 IEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS 125
Query: 137 XXXXXXX--XSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXX 194
S E I GQ+ D+ ++ E+N + K+G
Sbjct: 126 RYGTPLVQCTSKYVLEMIT-GQVHDVIGSST-LTADEIN---KMKSGSLFALSCSSVGHL 180
Query: 195 XXXXXXXXXRMRNFGKYVGMAYQLWNDIVD 224
+ FG +G+ +Q +DI D
Sbjct: 181 ANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|NSE_0694 [details] [associations]
symbol:NSE_0694 "putative geranyltranstransferase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
GO:GO:0003824 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0016740 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K00795 RefSeq:YP_506571.1
ProteinModelPortal:Q2GD75 STRING:Q2GD75 GeneID:3931424
KEGG:nse:NSE_0694 PATRIC:22681407 OMA:LAESSHI
ProtClustDB:CLSK2527634 BioCyc:NSEN222891:GHFU-707-MONOMER
Uniprot:Q2GD75
Length = 256
Score = 167 (63.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 62/210 (29%), Positives = 91/210 (43%)
Query: 20 KALKAKQ-INEALDEAVPL-PHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGSQSVA 76
K KA + I E L E + L P L +A+RYSL + L + +
Sbjct: 6 KLQKASRLIRETLKENLSLFPSEDKLFQAIRYSLLAESSHIRGFLVLELGTLFNIPYVDT 65
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXX 136
+ +A AIE++ + ++I DDLP LDN D RR +P+ H F E+TAILA AL LA Q
Sbjct: 66 IEVAAAIEMIHSFSLIHDDLPALDNSDERRNQPACHIAFQESTAILAGDALLVLAYQMLS 125
Query: 137 XXXXXXX--XSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXX 194
S E I GQ+ D+ ++ E+N + K+G
Sbjct: 126 RYGTPLVQCTSKYVLEMIT-GQVHDVIGSST-LTADEIN---KMKSGSLFALSCSSVGHL 180
Query: 195 XXXXXXXXXRMRNFGKYVGMAYQLWNDIVD 224
+ FG +G+ +Q +DI D
Sbjct: 181 ANSGQSELTVLEAFGYEIGIIFQAVDDIKD 210
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 171 (65.3 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 61/256 (23%), Positives = 109/256 (42%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVA 76
N+ +A+ A + E L VPL I H ++ GGKRL + + + G Q V
Sbjct: 21 NDIEAVDALIVKE-LSSHVPLIE-TITHHIIQ---SGGKRLRPLVVLLTARACGYEQDVE 75
Query: 77 -MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHX 135
+A IE + T ++ DD+ +D RRG+ + + ++G + ++L L+ A Q
Sbjct: 76 HQELATVIEFIHTATLLHDDV--VDKSTQRRGQKTANALWGNSASVLVGDFLYSRAFQIL 133
Query: 136 XXXXXXXXXS--AVGSEGIAAGQIMDINSEGKEVSLSELNF--IHRHKTGKFXXXXXXXX 191
A + I+ G++ + ++ + + E+ + + R KT +
Sbjct: 134 ARRSNVPIMKILATTTNQISEGEVWQLMNQN-DPDIDEVTYYEVIRRKTAQLFSAAAEIG 192
Query: 192 XXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
M FG ++GMAYQ+ +D++D +K G D+ KAT P +
Sbjct: 193 AIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASALDKNVGDDLAEGKATLPLIY 252
Query: 251 GIDGSKKHAKELIAEA 266
++ E I EA
Sbjct: 253 AKQQAQPAQAEHIREA 268
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 171 (65.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 57/249 (22%), Positives = 107/249 (42%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCI----ASCEMIGGSQSVA--MS 78
+++N+ L V +P ++ A + GGKR+ L A+ E+ G +
Sbjct: 107 QRLNDNLLSIVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRR 166
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXX 138
+ IE++ T ++I DD+ LD D+RRG+ + H++FG A+LA + A +
Sbjct: 167 LGEIIEMIHTASLIHDDV--LDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLANL 224
Query: 139 XXXXXXSAVGS--EGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFXXXXXXXXXXXX 195
+ + A+G+I +S +V L + +KT
Sbjct: 225 ENLEVIKLISQVIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFS 284
Query: 196 XXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDG 254
+M FGK +G+++Q+ +DI+D S E K D+ + T P + ++
Sbjct: 285 KVESKVAEQMYQFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALEN 344
Query: 255 SKKHAKELI 263
+ +E+I
Sbjct: 345 EPR-LREII 352
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 161 (61.7 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 58/248 (23%), Positives = 106/248 (42%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
K + + E L +++ E + L GKR+ + L + S + + + A A A
Sbjct: 14 KLRSVEEVLHDSMTTFTKLKSIEYAKKMLSSGKRIRALLSLLSFALCKNADTNAEIRAAA 73
Query: 83 -IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXX 141
IEL+ ++ DD+ +D + +RRGKP+ + G ++L L +A +
Sbjct: 74 TIELIHNATLMHDDV--VDENSIRRGKPNIKSIHGNKISVLTGDFLLSVAFEIILECKNL 131
Query: 142 XXXSAVG--SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXX 199
+ ++ ++ G+++ + S G+ VS SE + KT
Sbjct: 132 SVVLLLSKTAKQLSEGEMLQLQSIGEIVSESEYLEVIARKTAVLFSAAAEIAAILTGKQE 191
Query: 200 XXXXRMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGI-DGSKK 257
+R G +GMA+Q+ +D++D G P E+ + G D K T P ++ D K
Sbjct: 192 YVVI-LREIGFLIGMAFQITDDVLDY-GEPQEVGKSVGNDFRECKFTLPCVIAYRDAKSK 249
Query: 258 HAKELIAE 265
AK+ E
Sbjct: 250 AAKKFWRE 257
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 157 (60.3 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 55/240 (22%), Positives = 99/240 (41%)
Query: 42 ILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
++ + Y L GGKR+ L + S ++ G + +A IE + T ++ DD+ +D
Sbjct: 29 LIRKVGEYVLASGGKRIRPMLLLLSAKLCGYQGDRHVPLASVIEFIHTATLLHDDV--VD 86
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVGSEG--IAAGQIM 158
N LRRG S ++V+G ++L L + + IA G+++
Sbjct: 87 NATLRRGNASANEVWGNEASVLVGDFLFSKSFSLMVEAGDLRILKVISGATTIIAEGEVL 146
Query: 159 DINSEGKEVSLSELNFIH--RHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAY 216
+ ++ +++ +I + KT +R+FG +G+A+
Sbjct: 147 QLLCTS-DLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAEQQEALRDFGMDLGIAF 205
Query: 217 QLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP 275
QL +D +D S E K G D+ K T P + + +E IA A E +P
Sbjct: 206 QLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKCSDEERETIA-AVVEKEILEP 264
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 157 (60.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 60/236 (25%), Positives = 103/236 (43%)
Query: 54 GKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHK 113
GK + L + E G A+ A ++EL+ +++ DDL +D D+ RR +P+
Sbjct: 72 GKAIRPALVFVAAEAAGADPHSAIPGAVSVELVHNFSLVHDDL--MDRDEHRRHRPTVWA 129
Query: 114 VFGEATAILACQALHCLAMQHXXXXXXXXXXSAVG--SEG---IAAGQIMDINSEGK-EV 167
++G+A A+LA A+ LA + +A+ SE + GQ D E + +V
Sbjct: 130 LWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAFESRTDV 189
Query: 168 SLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG 227
+L E + KT + +G+++G+A+QL +D++ + G
Sbjct: 190 ALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLGIWG 249
Query: 228 SPEMREK-TGRDMMRDKATYPKL--VGIDGS--KKHAKELIAEAKQELAYFDPTRA 278
PE+ K D+ K T P V GS ++ A L+ E + A D A
Sbjct: 250 RPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDELAA 305
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 154 (59.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 63/256 (24%), Positives = 105/256 (41%)
Query: 43 LHE-AMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
LH+ AM GGKRL + + ++ +A A+EL+ ++ DD+ +DN
Sbjct: 37 LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDN 94
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHC--LAMQHXXXXXXXXXXSAVGSEGIAAGQIMD 159
LRRG P+ +G +I + L + A S + G+I
Sbjct: 95 SMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTGEIQQ 154
Query: 160 INSEGKEVSLSELNFIHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQ 217
+N K +S S +++ + KT ++ +G YVGMA+Q
Sbjct: 155 LNG-AKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQ 213
Query: 218 LWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT 276
+ +DI+D ++ K G D+ + T P L+ + KKH EL E Q L P
Sbjct: 214 IIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKH--ELWREL-QNL----PQ 266
Query: 277 RAAPLDHLVNFIVSFG 292
A ++ ++ I G
Sbjct: 267 NNANIEQIIKEIKYLG 282
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 154 (59.3 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 63/256 (24%), Positives = 105/256 (41%)
Query: 43 LHE-AMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
LH+ AM GGKRL + + ++ +A A+EL+ ++ DD+ +DN
Sbjct: 37 LHDPAMHLLKAGGKRLRPAFALLAAKLGDYDFEKVKPLAVALELIHMATLVHDDV--VDN 94
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHC--LAMQHXXXXXXXXXXSAVGSEGIAAGQIMD 159
LRRG P+ +G +I + L + A S + G+I
Sbjct: 95 SMLRRGLPTVKANWGNKMSIHIGDRIFAKSLLLIDSCKNNYVAKVLAEVSVKMTTGEIQQ 154
Query: 160 INSEGKEVSLSELNFIHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQ 217
+N K +S S +++ + KT ++ +G YVGMA+Q
Sbjct: 155 LNG-AKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQ 213
Query: 218 LWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT 276
+ +DI+D ++ K G D+ + T P L+ + KKH EL E Q L P
Sbjct: 214 IIDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKH--ELWREL-QNL----PQ 266
Query: 277 RAAPLDHLVNFIVSFG 292
A ++ ++ I G
Sbjct: 267 NNANIEQIIKEIKYLG 282
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 149 (57.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 59/252 (23%), Positives = 108/252 (42%)
Query: 25 KQINEALDEAVPL-PHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
+ + + E++ L P + GGKR+ + + E+ GS S +++ A A+
Sbjct: 20 RYVEAGIKESITLIEDPGLKKMVEHVCHSGGKRIRPIILLLVSEICSGSYSRSLNAALAV 79
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXX 143
E++ + ++I DDL LD +RR PS + FG + A+L L ++
Sbjct: 80 EMMHSASLIHDDL--LDQGLVRRNLPSAPEKFGPSGALLCGDYLIAKSIAFISPYGEKVI 137
Query: 144 XSAVGSEGI--AAGQIMDINSEGKEVSLSE-LNFIHRHKTGKFXXXXXXXXXXXXXXXXX 200
G G+ A G+++D+ E + ++ I++ KT
Sbjct: 138 QD-FGKAGMDMAEGEVLDLKLEDESFGENDYFKCIYK-KTASLFAISASIGAYTGGAEEE 195
Query: 201 XXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHA- 259
R +FG +G AYQ+ +DI++ + E+ E G++ T P + SK+ A
Sbjct: 196 LAERFSHFGNALGTAYQIVDDILEFL---EVVE--GKESKFTSETLPHIYMKSTSKEEAL 250
Query: 260 KELIAEAKQELA 271
K+ I K +A
Sbjct: 251 KKSIDCVKLHVA 262
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 149 (57.5 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 58/249 (23%), Positives = 101/249 (40%)
Query: 27 INEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMS-MACAIEL 85
+ E L+ AV + + A+ GGKR+ + + G M +A A+EL
Sbjct: 17 VEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAARF-GQYDLERMKHVAVALEL 75
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXXXS 145
+ +++ DD+ +D+ DLRRG+P+ + A+ L +++
Sbjct: 76 IHMASLVHDDV--IDDADLRRGRPTIKAKWSNRFAMYTGDYLFARSLERMAELGNPRAHQ 133
Query: 146 AVGSE--GIAAGQIMDINSEGK--EVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXX 201
+ + G+I I + + + + L I R KT
Sbjct: 134 VLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRR-KTALLIAASCQLGALAAGAPEPI 192
Query: 202 XXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAK 260
R+ FG YVGM++Q+ +DI+D G+ E K G D+++ T P L + S + K
Sbjct: 193 VKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYAL--SDERVK 250
Query: 261 ELIAEAKQE 269
IA E
Sbjct: 251 AAIAAVGPE 259
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 139 (54.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/214 (23%), Positives = 88/214 (41%)
Query: 45 EAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDL 104
E + Y L GGK L L + S G + +A + E+L ++ DD +D D
Sbjct: 38 EMLDYILVGGKVLRPALSMLSAMCFGTGIKKVLPLATSSEMLHIATLVHDD--AIDKADT 95
Query: 105 RRGKPSNHKVFGEATAILACQAL--HCLAMQHXXXXXXXXXXSAVGSEGIAAGQIMDINS 162
RR + + + V+G AIL L H + A + IA+G++ +
Sbjct: 96 RRSRRTVNSVWGLEKAILLGDFLFAHAAEVAAETDNMRIVTLFAQTLQIIASGELKQAYA 155
Query: 163 EGKEVSLSELNFIHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWN 220
E N++ R KT MR++G +G+++Q+ +
Sbjct: 156 SFNPDQSYE-NYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVD 214
Query: 221 DIVDVIGSP-EMREKTGRDMMRDKATYPKLVGID 253
DI+D +G+ +M + G D+ T P L+ +D
Sbjct: 215 DILDFVGNAKDMGKPVGSDLNNGTVTLPALLLMD 248
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 50/227 (22%), Positives = 101/227 (44%)
Query: 25 KQINEALDEAVP-LPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++I+E + + + L + IL+ M ++ GK+L S L + I +A + AI
Sbjct: 2 QKIDELIKQFLQELGYEPILN--MLSNVKSGKKLRSKLLLT----IADESEIAFKICAAI 55
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXX 143
EL+ +++ DD+ +D +LRRG S + FG A++ L+ A +
Sbjct: 56 ELIHLASLLHDDI--IDESELRRGARSVNAEFGTKNALMLGDILYSKAF-YELSKMDARF 112
Query: 144 XSAVGSEGI--AAGQIMDINSEGKEVSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXX 201
S + + A G++MD++ G++ ++++ ++ + K
Sbjct: 113 ASIISDAVVKLAIGELMDVDL-GEKFNINKEAYL-KMIYNKTAVLIEASARCGAILAGLY 170
Query: 202 XXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMRDKATYP 247
+GK +G+A+Q+ +DI+D+ ++ K D K T P
Sbjct: 171 EKDFAEYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLP 217
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 52/237 (21%), Positives = 89/237 (37%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIEL 85
++ + L E + I A GGKR+ + S + + + A ++EL
Sbjct: 16 EVEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLIRTAVSLEL 75
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXXXS 145
+ +++ DD +DN D+RRG S H F + TAI L A+Q+
Sbjct: 76 VHMASLVHDDY--IDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATINNSKFHQ 133
Query: 146 AVGSE--GIAAGQIMDINSEGKEVSLSELNFIHR--HKTGKFXXXXXXXXXXXXXXXXXX 201
+ G+ D ++ +S ++ R KT
Sbjct: 134 IFSKTILEVCFGEF-DQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSSQLDEQS 192
Query: 202 XXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKK 257
++ FG +GM+YQ+ +DI+D K G D+ TYP + I K+
Sbjct: 193 TYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIANLKE 249
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 130 (50.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 41/205 (20%), Positives = 84/205 (40%)
Query: 53 GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNH 112
GGKRL L +A+ + G + +A +E + T ++ DD+ +D RRG+P+ +
Sbjct: 51 GGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTAN 108
Query: 113 KVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVGSEG--IAAGQIMDINSEGKEVSLS 170
++ +++L L + Q + + IA G+++ + + ++
Sbjct: 109 LLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDILANAAATIAEGEVLQMTA-ASDLRTD 167
Query: 171 ELNFIH--RHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS 228
E ++ R KT + +G +G+A+Q+ +D++D G
Sbjct: 168 ESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGD 227
Query: 229 PEMREKT-GRDMMRDKATYPKLVGI 252
+ K G D K T P + +
Sbjct: 228 AKATGKNVGDDFRERKLTLPVIKAV 252
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 130 (50.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 41/205 (20%), Positives = 84/205 (40%)
Query: 53 GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNH 112
GGKRL L +A+ + G + +A +E + T ++ DD+ +D RRG+P+ +
Sbjct: 51 GGKRLRPMLTLAAARLCGYQGEDHVKLAATVEFIHTATLLHDDV--VDESGQRRGRPTAN 108
Query: 113 KVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVGSEG--IAAGQIMDINSEGKEVSLS 170
++ +++L L + Q + + IA G+++ + + ++
Sbjct: 109 LLWDNKSSVLVGDYLFARSFQLMVETGSLRVLDILANAAATIAEGEVLQMTA-ASDLRTD 167
Query: 171 ELNFIH--RHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGS 228
E ++ R KT + +G +G+A+Q+ +D++D G
Sbjct: 168 ESVYLQVVRGKTAALFSAATEVGGVIAGVPEAQVRALFEYGDALGIAFQIADDLLDYQGD 227
Query: 229 PEMREKT-GRDMMRDKATYPKLVGI 252
+ K G D K T P + +
Sbjct: 228 AKATGKNVGDDFRERKLTLPVIKAV 252
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 130 (50.8 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 46/203 (22%), Positives = 81/203 (39%)
Query: 53 GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNH 112
GGKR + S ++ + A+++A A+ ++ +A + D +D +RRG PS +
Sbjct: 55 GGKRFRPLFTVLSAQIGPQPDAAAVTVAGAVIEMIHLATLYHD-DVMDEAQVRRGAPSAN 113
Query: 113 KVFGEATAILACQALHCLAMQHXXXXXXXXXXSAVGSEG-IAAGQIMDINSEGKEV-SLS 170
+G AILA L A + + + GQ+ + + V S+
Sbjct: 114 AQWGNNVAILAGDYLLATASRLVARLGPEAVRIIADTFAQLVTGQMRETRGTSENVDSIE 173
Query: 171 ELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SP 229
+ + + KTG R+ G VG A+Q+ +DI+D+ S
Sbjct: 174 QYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESD 233
Query: 230 EMREKTGRDMMRDKATYPKLVGI 252
E + G D+ T P L +
Sbjct: 234 ESGKLPGTDVREGVHTLPMLYAL 256
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 91 (37.1 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 208 FGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGS--KKHAKELIA 264
FG YVGM+YQ+ +DI+D + E + + G D+++ T P L + K K + +
Sbjct: 227 FGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPALKNQLKLINS 286
Query: 265 EAKQE 269
E QE
Sbjct: 287 ETTQE 291
Score = 81 (33.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 27 INEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMS-MACAIEL 85
I L++ V +P + + GGKR+ + S M G + +A +E+
Sbjct: 45 IERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLLS-GMFGDYDINKIKYVAVTLEM 103
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPS 110
+ +++ DD+ +D+ +LRRGKP+
Sbjct: 104 IHMASLVHDDV--IDDAELRRGKPT 126
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 129 (50.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 50/232 (21%), Positives = 96/232 (41%)
Query: 27 INEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELL 86
I + L + V P + A++ GGKR+ + + + +A A+EL+
Sbjct: 17 IEKELKKTVASEQPLVEEAALQLIEAGGKRIRPVFVLLAGKFGDYKLDAIKHVAVALELI 76
Query: 87 VTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHXXXXXXXXXXSA 146
+++ DD+ +D LRRG + + +G+ A+ L +++ A
Sbjct: 77 HMASLVHDDV--IDAAFLRRGSATVNAKWGDRIAMYTGDYLFAKSLECITNIEIPEAHQA 134
Query: 147 VGSE--GIAAGQIMDINSE-GKEVSL-SELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXX 202
+ + G+I I + + +L + L I R KT
Sbjct: 135 LSHTILEVCKGEIEQIKDKYNYDQNLRTYLRRIKR-KTALLIAASCQLGAIAAGANRDTV 193
Query: 203 XRMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGID 253
R+ +G +VGM+YQ+ +DI+D + + E K G D+++ T P L ++
Sbjct: 194 SRLFWYGYFVGMSYQIIDDILDFVSTEEKLGKPAGGDLLQGNITLPALYAME 245
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 47/198 (23%), Positives = 80/198 (40%)
Query: 57 LMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFG 116
LM+ C G S+A E++ T +++ DD+ +D+ D RRGK + + V+G
Sbjct: 139 LMARACNVHSNKEGVLLPAQRSIAMISEMIHTASLVHDDV--IDDSDKRRGKNTINNVWG 196
Query: 117 EATAILACQALHCLAMQHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNF 174
E AILA + A S + E + G+ M + S+ E + ++
Sbjct: 197 ERKAILAGDFILSAASMALARIGNTTVVSVLSQVIEDLVRGEFMQLGSKENENERFK-HY 255
Query: 175 IHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
+ + KT +G+ VG+A+QL +DI+D +
Sbjct: 256 LEKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGRNVGIAFQLVDDILDFTSNANCL 315
Query: 233 EK-TGRDMMRDKATYPKL 249
K + D+ AT P L
Sbjct: 316 GKPSAADLKLGLATGPVL 333
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 43/182 (23%), Positives = 79/182 (43%)
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q+ S+A E++ T +++ DD+ +D+ RRGK + +K++GE A+LA + A
Sbjct: 109 QASQRSIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 166
Query: 133 QHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNFIHR--HKTGKFXXXXX 188
S + E + G+ + + S+ E + +++ + KT
Sbjct: 167 MALARIGNTTVISILTQVIEDLVRGEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSC 225
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYP 247
+GK VG+A+QL +D++D S +M + T D+ AT P
Sbjct: 226 KAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGP 285
Query: 248 KL 249
L
Sbjct: 286 VL 287
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 46/198 (23%), Positives = 82/198 (41%)
Query: 57 LMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFG 116
LM+ C Q+ S+A E++ T ++ DD+ +D+ RRGK + +K++G
Sbjct: 137 LMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDV--IDDASSRRGKHTVNKIWG 194
Query: 117 EATAILACQALHCLAMQHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNF 174
E A+LA + A S + E + G+ + + S+ E + ++
Sbjct: 195 EKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGSKENE-NERFAHY 253
Query: 175 IHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEM 231
+ + KT +GK VG+A+QL +D++D S +M
Sbjct: 254 LEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQM 313
Query: 232 REKTGRDMMRDKATYPKL 249
+ T D+ AT P L
Sbjct: 314 GKPTSADLKLGIATGPVL 331
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 117 (46.2 bits), Expect = 0.00024, P = 0.00024
Identities = 45/198 (22%), Positives = 83/198 (41%)
Query: 57 LMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFG 116
LM+ C Q+ ++A E++ T +++ DD+ +D+ RRGK + +K++G
Sbjct: 146 LMARACNIHHNNARNVQASQRAIALIAEMIHTASLVHDDI--IDDASSRRGKHTVNKIWG 203
Query: 117 EATAILACQALHCLAMQHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNF 174
E A+LA + A S + E + G+ + + S+ E + ++
Sbjct: 204 EKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENE-NERFAHY 262
Query: 175 IHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEM 231
+ + KT +GK VG+A+QL +D++D S +M
Sbjct: 263 LEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSEQM 322
Query: 232 REKTGRDMMRDKATYPKL 249
+ T D+ AT P L
Sbjct: 323 GKPTSADLKLGLATGPVL 340
>UNIPROTKB|Q97W92 [details] [associations]
symbol:gdS-2 "Hexaprenyl pyrophosphate synthase"
species:273057 "Sulfolobus solfataricus P2" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IDA] [GO:0052922 "hexaprenyl
diphosphate synthase (geranylgeranyl-diphosphate specific)
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 EMBL:AE006641
GenomeReviews:AE006641_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 PIR:A99405 RefSeq:NP_343706.1
PDB:2AZJ PDB:2AZK PDBsum:2AZJ PDBsum:2AZK ProteinModelPortal:Q97W92
SMR:Q97W92 GeneID:1453823 KEGG:sso:SSO2345 HOGENOM:HOG000232204
OMA:KDTAVGA ProtClustDB:CLSK803315 BioCyc:MetaCyc:MONOMER-15679
EvolutionaryTrace:Q97W92 GO:GO:0052922 Uniprot:Q97W92
Length = 281
Score = 113 (44.8 bits), Expect = 0.00033, P = 0.00033
Identities = 60/255 (23%), Positives = 100/255 (39%)
Query: 49 YSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGK 108
Y L GKR TL + +GG + A AIE+L + ++ DD+ +D D RRG
Sbjct: 36 YILKDGKRFRGTLNMFFTVALGGDIKDSYGGALAIEILHSASLALDDI--VDLDATRRGD 93
Query: 109 PSNHKVFGEATAILACQALHCLAMQ--HXXXXXXXXXXSAVGSEGIAAGQIMDINSEGKE 166
+ V+G I L A++ S + + G + D+
Sbjct: 94 KAAWVVYGNRKVIFITNYLIPTALRIIQTSYGDDALNTSIELWKDTSVGALRDMYDNSDY 153
Query: 167 VSLSELNFIHRHKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVD-- 224
+ EL KTG +M + GKY+G+ YQ+ +D VD
Sbjct: 154 IRTIEL------KTGSLFKLSTVLSAYASKHYNTKQ-QMLDVGKYLGIIYQVIDDFVDYK 206
Query: 225 ------VIGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRA 278
+ GS + K R+ ++ Y + V ++ +K+ ELI+ + Y R+
Sbjct: 207 TKKVEEIDGSAKQLFKYYREGKLEE--YVRSVYLEYKQKY-DELISNIPFQSKYLSEIRS 263
Query: 279 APLDHLVNFIVSFGN 293
P + L N ++ N
Sbjct: 264 LP-EFLANGLLKEAN 277
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 115 (45.5 bits), Expect = 0.00040, P = 0.00040
Identities = 45/198 (22%), Positives = 83/198 (41%)
Query: 57 LMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFG 116
LM+ C Q+ ++A E++ T +++ DD+ +D+ RRGK + +K++G
Sbjct: 138 LMARACNIHHNNSRDMQASQRTIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWG 195
Query: 117 EATAILACQALHCLAMQHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNF 174
E A+LA + A S + E + G+ + + S+ E + ++
Sbjct: 196 EKKAVLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENE-NERFAHY 254
Query: 175 IHR--HKTGKFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEM 231
+ + KT +GK VG+A+QL +D++D S +M
Sbjct: 255 LEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQM 314
Query: 232 REKTGRDMMRDKATYPKL 249
+ T D+ AT P L
Sbjct: 315 GKPTSADLKLGLATGPVL 332
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 113 (44.8 bits), Expect = 0.00068, P = 0.00068
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q+ ++A E++ T +++ DD+ +D+ RRGK + +K++GE A+LA + A
Sbjct: 159 QASQRAIALIAEMIHTASLVHDDV--IDDASSRRGKHTVNKIWGEKKAVLAGDLILSAAS 216
Query: 133 QHXXXXXXXXXXSAVGS--EGIAAGQIMDINSEGKEVSLSELNFIHR--HKTGKFXXXXX 188
S + E + G+ + + S+ E + +++ + KT
Sbjct: 217 IALARIGNTTVISILTQVIEDLVRGEFLQLGSKENE-NERFAHYLEKTFKKTASLIANSC 275
Query: 189 XXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYP 247
+GK VG+A+QL +D++D S +M + T D+ AT P
Sbjct: 276 KAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGP 335
Query: 248 KL 249
L
Sbjct: 336 VL 337
>FB|FBgn0025373 [details] [associations]
symbol:Fpps "Farnesyl pyrophosphate synthase" species:7227
"Drosophila melanogaster" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS;NAS] [GO:0004161
"dimethylallyltranstransferase activity" evidence=NAS] [GO:0045337
"farnesyl diphosphate biosynthetic process" evidence=IC]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008354 "germ cell migration" evidence=IMP] [GO:0035220 "wing
disc development" evidence=IGI] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:AE013599 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0035220 GO:GO:0008299
GO:GO:0008354 GO:GO:0004161 GO:GO:0004337 KO:K00787 OMA:VAMQRAN
GeneTree:ENSGT00530000064127 HSSP:P08836 FlyBase:FBgn0025373
EMBL:AF132554 EMBL:AY071445 RefSeq:NP_477380.1 UniGene:Dm.3229
SMR:Q7KN61 IntAct:Q7KN61 STRING:Q7KN61 EnsemblMetazoa:FBtr0088170
GeneID:36209 KEGG:dme:Dmel_CG12389 UCSC:CG12389-RA CTD:36209
InParanoid:Q7KN61 GenomeRNAi:36209 NextBio:797354 Uniprot:Q7KN61
Length = 419
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 47/212 (22%), Positives = 88/212 (41%)
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEA-TAI----LACQALHC 129
+A + +E+L + +I DD+ +DN RRG+P HKV TAI + A++
Sbjct: 153 LAQYLGWCVEMLQSFFIISDDV--MDNSTTRRGQPCWHKVENVGLTAINDALMIENAMYA 210
Query: 130 LAMQHXXXXXXXXXXSAVGSEGI---AAGQIMD-INSEG--KEVSLSELNFIHRHKTG-- 181
+ +H + E GQ +D +NS E ++ I +KT
Sbjct: 211 ILKKHFSHLDCYVALMELFHEITYITTCGQSLDQLNSNRCVSEFTMENYKAIVENKTAYY 270
Query: 182 KFXXXXXXXXXXXXXXXXXXXXRMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMR 241
F + + +G +Q+ +D +D G+PE+ K G D+
Sbjct: 271 SFYLPFALALHLAGYKDAEAFRQSKTILLEMGNFFQVQDDFLDCFGNPEVTGKIGTDIQD 330
Query: 242 DKATYPKLVGIDGSKKHAKELIAEA--KQELA 271
+K ++ +V + + K+++ + K+E A
Sbjct: 331 NKCSWLAVVAMQRANVEQKQIMVDCYGKEEPA 362
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 295 265 0.00093 114 3 11 22 0.46 33
32 0.50 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 600 (64 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.72u 0.16s 19.88t Elapsed: 00:00:01
Total cpu time: 19.74u 0.16s 19.90t Elapsed: 00:00:01
Start: Thu May 9 14:12:12 2013 End: Thu May 9 14:12:13 2013