BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037594
(295 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255580739|ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223529232|gb|EEF31206.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 372
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/293 (53%), Positives = 217/293 (74%), Gaps = 13/293 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY A KAK +N+ALDEA+PL +P +H+AMRYSL GGKR+ LCIA+CE++GG
Sbjct: 80 FPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAGGKRVRPVLCIAACELVGGD 139
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK+FGE TAILA AL +
Sbjct: 140 EATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDALLSFSF 199
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+H+A +++A + SAVGSEG+ AGQI+DI+SEGK+VS+S+L +IH HKT
Sbjct: 200 EHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDSEGKDVSVSDLEYIHIHKTA 259
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
K +EAS+V G I+GG ++E +ER+R + + +G+ +Q+ +DI+DV S E KT G+D++
Sbjct: 260 KLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDILDVTKSSEELGKTAGKDLI 319
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DKATYPKL+GID ++K A +L+ +A QELAYFD +AAPL H N+I S N
Sbjct: 320 TDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPLYHFANYIASRQN 372
>gi|325516280|gb|ADZ24718.1| geranylgeranyl pyrophosphate synthase 1 [Solanum pennellii]
Length = 365
Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 154/298 (51%), Positives = 224/298 (75%), Gaps = 16/298 (5%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
LP+F + EY KA ++N+ALDEA+P+ P +HEAMRYSL GGKR+ LC+ASCE+
Sbjct: 70 LPEF-EFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEV 128
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+GG +S+A+ ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE TA+LA AL
Sbjct: 129 VGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTAVLAGDALL 188
Query: 129 CLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIH 176
LA +H+A K +N+ SAVGSEG+ AGQI+D+ SEGK+VSL+EL +IH
Sbjct: 189 SLAFEHVA-TKTQNVAPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIH 247
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
+HKT K +EA++V G I+GGGNE ++ERMR++ + +G+ +Q+ +DI+DV S E+ +
Sbjct: 248 QHKTAKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTA 307
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ DKATYPKL+G++ ++++A EL+A+A EL+YFD +AAPL H+ ++I + N
Sbjct: 308 GKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDSAKAAPLYHIASYIANRQN 365
>gi|290575616|gb|ADD49735.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 365
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/292 (53%), Positives = 219/292 (75%), Gaps = 14/292 (4%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
LPKF EY +KA ++N+ALD+A+P+ P +HEAMRYSL GGKR+ LC+ASCE+
Sbjct: 70 LPKF-DFEEYMKMKAIKVNKALDDAIPMQEPIKIHEAMRYSLLAGGKRVRPILCMASCEV 128
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+GG +S+A+ AC++E++ TM++I DDLPC+DNDDLRRGKP++HK FGE TA+L AL
Sbjct: 129 VGGDESLAIPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKAFGEDTAVLTGDALL 188
Query: 129 CLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA +H+A +++A + SAVGS+G+ AGQI+DI SEGK+VSL+EL +IH
Sbjct: 189 SLAFEHVASKTKDVTPQRVVQAVGELGSAVGSKGLVAGQIVDIASEGKQVSLTELEYIHN 248
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTGK +EA++V G IIGGGNE E+ERMRN+ + +G+ +Q+ +DI+DV S E KT G
Sbjct: 249 HKTGKLLEAAVVCGAIIGGGNEIEVERMRNYARCLGLLFQVVDDILDVTKSSEELGKTAG 308
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D++ DKATYPKL+G++ +++ A EL+A+A EL+YFD +AAPL H N+I
Sbjct: 309 KDLVTDKATYPKLMGLEKARELAGELVAKAMDELSYFDAAKAAPLYHFANYI 360
>gi|291170333|gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
Length = 370
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 212/294 (72%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY LKA +NEALD+AVPL HP +H AMRYSL GGKR+ LCIA+CE++GG
Sbjct: 78 FPFEEYMVLKANNVNEALDKAVPLNHPLKIHAAMRYSLLAGGKRVRPILCIAACELVGGD 137
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK+FGE TAILA A+ LA
Sbjct: 138 EAAAMPSACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKMFGEETAILAGDAMLSLAF 197
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+HIA KN++ SAVGSEG+ AGQI+D+ SEGKEV++ +L +IH HKT
Sbjct: 198 EHIA-RATKNVSPERVVRVITELGSAVGSEGLVAGQIVDVCSEGKEVNVKDLEYIHIHKT 256
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
K +EA++V G I GG ++E IER+R + + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 257 AKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQVIDDILDVTKSSEELGKTAGKDL 316
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DKATYPKL+GID ++K A +L+ EA QELAYFD +AAPL H N+I S N
Sbjct: 317 VSDKATYPKLLGIDEARKLAAKLVDEANQELAYFDSAKAAPLYHFANYIASRQN 370
>gi|350538439|ref|NP_001234087.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
gi|82547880|gb|ABB82554.1| geranylgeranyl pyrophosphate synthase 1 [Solanum lycopersicum]
Length = 365
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 223/298 (74%), Gaps = 16/298 (5%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
LP+F + EY KA ++N+ALDEA+P+ P +HEAMRYSL GGKR+ LC+ASCE+
Sbjct: 70 LPEF-EFQEYMVTKAIKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPILCMASCEV 128
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+GG +S+A+ ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHK+FGE TA+LA AL
Sbjct: 129 VGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKIFGENTAVLAGDALL 188
Query: 129 CLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIH 176
LA +H+A K +N+ SAVGSEG+ AGQI+D+ SEGK+VSL+EL +IH
Sbjct: 189 SLAFEHVA-TKTQNVPPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSLTELEYIH 247
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
HKT K +EA++V G I+GGGNE ++ERMR++ + +G+ +Q+ +DI+DV S E+ +
Sbjct: 248 HHKTSKLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSSDELGKTA 307
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ DKATYPKL+G++ ++++A EL+A+A EL+YFD +AAPL H+ ++I + N
Sbjct: 308 GKDLITDKATYPKLMGLEKARQYAGELMAKAMNELSYFDYAKAAPLYHIASYIANRQN 365
>gi|224069436|ref|XP_002302977.1| predicted protein [Populus trichocarpa]
gi|222844703|gb|EEE82250.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/289 (55%), Positives = 208/289 (71%), Gaps = 15/289 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGS 72
FQ EY K KQ+NEAL+EAVPL HP +HEAMRYSL G GKR+ LCIASCE++GG
Sbjct: 22 FQFKEYMLTKLKQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGD 81
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM +ACA+E++ M++I DDLPC+DNDDLRRGKP+NHKVFGE AILA AL LA
Sbjct: 82 EELAMPLACALEMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVFGECIAILAGDALLSLAF 141
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+HIA K KN++ SA+GS G+ AGQI+DI+SEGKEVS+ L +IH HKT
Sbjct: 142 EHIA-SKTKNVSPDCVVRAIAELGSAIGSRGVVAGQIVDIDSEGKEVSMKTLEYIHVHKT 200
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
K +EAS V G I+GG ++ IER+R + + +G+ YQ+ +DI+D S E KT G+D+
Sbjct: 201 AKLLEASAVCGAIMGGADDASIERLRKYARSIGLLYQVVDDILDATKSSEELGKTAGKDL 260
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+KATYPKL+GID +KK A EL+ +AK+E+A FD +A PL HL ++I
Sbjct: 261 ASNKATYPKLMGIDEAKKFAAELVEQAKKEIASFDSAKAVPLFHLADYI 309
>gi|224077270|ref|XP_002305196.1| predicted protein [Populus trichocarpa]
gi|222848160|gb|EEE85707.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/293 (53%), Positives = 212/293 (72%), Gaps = 13/293 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F+ EY KA Q+N+ALDEAVPL HP ++EAMRYSL GGKR+ LCIASCE++GG
Sbjct: 73 FEFKEYMINKANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGD 132
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+DNDDLRRGKP++HK+FGE TA+LA AL LA
Sbjct: 133 EGLAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEDTAVLAGDALLSLAF 192
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+H+A +++A + S VGS+G+ AGQI+DI+SEGKEVSLS L +IH HKT
Sbjct: 193 EHVARNTKNVSSDRVVQAIAELGSTVGSKGLVAGQIVDIDSEGKEVSLSTLEYIHVHKTA 252
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
K +EA++V G I+GG + +ER+R + + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 253 KLLEAAVVCGAIMGGADATSVERLRKYARSIGLLFQVVDDILDVTKSSEELGKTAGKDLA 312
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DKATYPKL+GID +KK A +L+ EA Q LA+FD +AAPL H N+I + N
Sbjct: 313 SDKATYPKLMGIDEAKKFAAQLVDEANQGLAFFDHVKAAPLYHFANYIATRQN 365
>gi|79154639|gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 367
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 219/306 (71%), Gaps = 19/306 (6%)
Query: 2 INSQRNDTLPKF-----FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGK 55
+N Q T P+ F Y K+IN+ALDEAVP+ PAI+HEAMRYSL GGK
Sbjct: 57 VNVQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGK 116
Query: 56 RLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVF 115
R+ LCIASCE++GG +S AM MACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+
Sbjct: 117 RVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVY 176
Query: 116 GEATAILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG 164
GE TAILA AL LA +H+A +++A + SAVGS+G+ AGQIMDI ++G
Sbjct: 177 GEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQG 236
Query: 165 KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K+V L++L +IH HKT K +EAS+V G I+GGGN E+ER+R + + +G+ +Q+ +DI+D
Sbjct: 237 KDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296
Query: 225 VI-GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF-DPTRAAPLD 282
V S E+ + G+D++ DK TYPKL+G++ +K+ A EL+A+A++EL+YF TR APL
Sbjct: 297 VTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSTRVAPLY 356
Query: 283 HLVNFI 288
HL +I
Sbjct: 357 HLAKYI 362
>gi|4958920|dbj|BAA78047.1| GGPP synthase [Daucus carota]
Length = 367
Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 219/306 (71%), Gaps = 19/306 (6%)
Query: 2 INSQRNDTLPKF-----FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGK 55
+N Q T P+ F Y K+IN+ALDEAVP+ PAI+HEAMRYSL GGK
Sbjct: 57 VNVQELLTNPRVTPGPEFHFEGYMKTSGKKINKALDEAVPVQKPAIIHEAMRYSLLAGGK 116
Query: 56 RLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVF 115
R+ LCIASCE++GG +S AM MACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+
Sbjct: 117 RVRPVLCIASCELVGGLESWAMPMACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVY 176
Query: 116 GEATAILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG 164
GE TAILA AL LA +H+A +++A + SAVGS+G+ AGQIMDI ++G
Sbjct: 177 GEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIMDICNQG 236
Query: 165 KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K+V L++L +IH HKT K +EAS+V G I+GGGN E+ER+R + + +G+ +Q+ +DI+D
Sbjct: 237 KDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQVVDDILD 296
Query: 225 VI-GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT-RAAPLD 282
V S E+ + G+D++ DK TYPKL+G++ +K+ A EL+A+A++EL+YF + R APL
Sbjct: 297 VTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSARVAPLY 356
Query: 283 HLVNFI 288
HL +I
Sbjct: 357 HLAKYI 362
>gi|34484306|gb|AAQ72786.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072687|gb|ABV08866.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
gi|157072689|gb|ABV08867.1| geranylgeranyl diphosphate synthase [Ginkgo biloba]
Length = 391
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/290 (51%), Positives = 205/290 (70%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F +Y KA +NEALD+AVP +P +HE+MRYSL GGKR+ TLCIA+CE++GG+
Sbjct: 97 FDFKKYMYSKAISVNEALDKAVPTHYPEKIHESMRYSLLAGGKRVRPTLCIAACELVGGT 156
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM +I DDLPC+DND+LRRGKP+NHK FGE TA+LA AL A
Sbjct: 157 EDLAMPAACAMEMIHTMTLIHDDLPCMDNDNLRRGKPTNHKAFGEDTAVLAGDALLSFAF 216
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
+HIA +K + S ++GSEG+ AGQI+DI SEG V L L +IH HK
Sbjct: 217 EHIARSTSKTVESERVLRVICELGKSMGSEGLVAGQIVDIASEGDTSVDLKTLEYIHLHK 276
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+VSG IIGG +EEEIER R + + VG+ +Q+ +DI+DV + E KT G+D
Sbjct: 277 TAVLLECSVVSGAIIGGASEEEIERTRRYARCVGLLFQVVDDILDVTKTSEELGKTAGKD 336
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DKATYPKL+G++ +K+ A EL+ +AK+EL+YFDP +AAPL L ++I
Sbjct: 337 LISDKATYPKLMGLEKAKEFAVELVNKAKEELSYFDPVKAAPLLGLADYI 386
>gi|224286499|gb|ACN40956.1| unknown [Picea sitchensis]
Length = 383
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 206/295 (69%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY KA +NEALD AVPL +P +HEAMRYSL GGKR+ LCIA+CE++GGS
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLP +DNDDLRRGKP+NHKVFGE TA+LA AL A
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + S A+GSEG+A GQ+ DI S+G V L L +IH HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+ SG IIGG +++EIER+R + + VG+ +Q+ +DI+DV S E KT +D
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DKATYPKL+G++ +K+ A EL+ +AK+EL++F+PT+AAPL L ++I N
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|269996470|gb|ACZ57571.1| isoprenyl diphosphate synthase [Picea abies]
Length = 383
Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/295 (50%), Positives = 206/295 (69%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY KA +NEALD AVPL +P +HEAMRYSL GGKR+ LCIA+CE++GGS
Sbjct: 89 FDFKEYMRSKAMSVNEALDRAVPLRYPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGS 148
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLP +DNDDLRRGKP+NHKVFGE TA+LA AL A
Sbjct: 149 EELAMPTACAMEIIHTMSLIHDDLPPMDNDDLRRGKPTNHKVFGEGTAVLAGDALLSFAF 208
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + S A+GSEG+A GQ+ DI S+G V L L +IH HK
Sbjct: 209 EHIAVSTSKTVESDRVLRVVSELGRAIGSEGVAGGQVADITSQGNPSVGLETLEWIHIHK 268
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+ SG IIGG +++EIER+R + + VG+ +Q+ +DI+DV S E KT +D
Sbjct: 269 TAVLLECSVASGAIIGGASDDEIERVRKYARCVGLLFQVVDDILDVTKSSEELGKTAAKD 328
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DKATYPKL+G++ +K+ A EL+ +AK+EL++F+PT+AAPL L ++I N
Sbjct: 329 LLSDKATYPKLMGLEKAKEFADELLGKAKEELSFFNPTKAAPLLGLADYIAQRQN 383
>gi|56122559|gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 359
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/293 (50%), Positives = 203/293 (69%), Gaps = 13/293 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
FQ EY A A+++N+ALD++VPL HP +HEAMRYSL GGKR+ LCIASCE++GG
Sbjct: 67 FQFEEYMAEMAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGGD 126
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A +ACA+E++ TM++I DDLPC+DNDD RRG P+NHK FGE TA+LA AL LA
Sbjct: 127 PVAAHPIACALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAFGEETAVLAGDALLSLAF 186
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+H+A +++ + VGS+G+ GQI+DI S GK++ LSEL +IH HKT
Sbjct: 187 EHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIVDIASAGKQIELSELEYIHLHKTA 246
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+EAS+V G I+GGG +IER+R + +Y+G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 247 ILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQVVDDILDVTKSSEELGKTAGKDLA 306
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DKATYPKL+GID +K+ A L+A+A +EL Y+D +AAPL H ++I N
Sbjct: 307 TDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFAKAAPLYHFADYIAYRQN 359
>gi|224069444|ref|XP_002302978.1| predicted protein [Populus trichocarpa]
gi|222844704|gb|EEE82251.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 152/284 (53%), Positives = 207/284 (72%), Gaps = 13/284 (4%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
K Q+N+ALDEAVPL HP +HEAMRYSL GGKR+ LCIASCE++GG + +AM AC
Sbjct: 4 KGNQVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTAC 63
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E++ TM++I DDLPC+DNDDLRRG P++HKVFGE TA+LA AL LA +H+A
Sbjct: 64 ALEMIHTMSLIHDDLPCMDNDDLRRGMPTSHKVFGEDTAVLAGDALLALAFEHVARNTKN 123
Query: 137 -----IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+++A + SAVGS+G+ AGQ++DI SEGKEVSLS L +IH HKT K +EA++V
Sbjct: 124 VSSDRVVQALAELGSAVGSKGLVAGQVVDIESEGKEVSLSTLEYIHVHKTAKLLEAAVVC 183
Query: 191 GVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKL 249
G I+GG + +ER+R + + +G+ +Q+ +DI+D+ S E KT G+D+ DKATYPKL
Sbjct: 184 GAIMGGADATSVERLRKYARSIGLLFQVVDDILDMTKSSEELGKTAGKDLTSDKATYPKL 243
Query: 250 VGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+GID +KK A +L +A QEL ++DP +AAPL HL ++I S N
Sbjct: 244 IGIDEAKKFAAQLTDQANQELGFYDPVKAAPLYHLASYIASRQN 287
>gi|356559416|ref|XP_003547995.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 367
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 201/292 (68%), Gaps = 14/292 (4%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA +N+ALD+AV L P +HEAMRYSL GGKR+ LC+A+CE++
Sbjct: 71 PPIFDFKNYMVSKASAVNKALDDAVSLREPQKIHEAMRYSLLAGGKRVRPVLCVAACELV 130
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG ++ AM ACAIE++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 131 GGEEATAMPAACAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLA 190
Query: 130 LAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHR 177
A +HIA I++A + ++GSEG+ AGQ++DINSEG +V L L FIH
Sbjct: 191 FAFEHIAASTRGASPGRIVRAIGELARSIGSEGLVAGQVVDINSEGLADVDLERLEFIHV 250
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTG 236
HKT +E ++V G I+GGG ++E+E++R F +Y+G+ +Q+ +DI+DV S E+ + G
Sbjct: 251 HKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAG 310
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D++ DK TYPKL+GI+ SK A +L +A+ +L FDP +AAPL L N+I
Sbjct: 311 KDLVADKVTYPKLLGIEKSKVFAAKLNKDAQDQLVGFDPVKAAPLIALANYI 362
>gi|75250205|sp|Q94ID7.1|GGPPS_HEVBR RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|14325238|dbj|BAB60678.1| geranylgeranyl diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/293 (49%), Positives = 206/293 (70%), Gaps = 16/293 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y K IN+AL+ A+PL PA +HE+MRYSL GGKR+ LC+A+CE++
Sbjct: 74 PPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELV 133
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NH VFGE A+LA AL
Sbjct: 134 GGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLA 193
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIH 176
A +HIA + N++S A+G+EG+ AGQ++DINSEG EV L +L FIH
Sbjct: 194 FAFEHIA-VSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIH 252
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
HKT K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E+ +
Sbjct: 253 IHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTA 312
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D++ DK TYPKL+GI+ S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 313 GKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 365
>gi|224285135|gb|ACN40295.1| unknown [Picea sitchensis]
Length = 382
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 202/290 (69%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F N+Y KA +N+ALD AVPL P LHE+MRYS L GGKR+ LCIA+CE++GG+
Sbjct: 88 FDFNKYMHAKAISVNQALDRAVPLRFPQKLHESMRYSILSGGKRVRPVLCIAACELVGGT 147
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM +ACAIE++ M ++ DD+PCLDNDD+RRGKP+NHKVFGE TA++A AL +A
Sbjct: 148 EELAMPIACAIEMIHVMTLLHDDMPCLDNDDIRRGKPTNHKVFGEGTALIAGVALLSVAF 207
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + + GS+GI GQ +D+ SEG V+L L +IH HK
Sbjct: 208 EHIAVSTSKTVGNDRILRMVSELGRTTGSQGIMGGQFLDLVSEGDASVNLQTLQWIHAHK 267
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E+S+V G IIGG +E+EIER+R + VG+ +Q+ +DI+DV S E KT G+D
Sbjct: 268 TAVLLESSVVCGAIIGGASEDEIERIRRYASCVGILFQVVDDILDVTKSSEELGKTAGKD 327
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+M DKATYPKL+G++ SK+ + EL+ AK+EL+YFDP + APL L ++I
Sbjct: 328 LMSDKATYPKLMGLEKSKQFSIELLDRAKKELSYFDPAKTAPLLALADYI 377
>gi|164605012|dbj|BAF98302.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 370
Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/293 (49%), Positives = 206/293 (70%), Gaps = 16/293 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA IN+AL+ A+PL PA +HE+MRYSL GGKR+ LC+A+CE++
Sbjct: 74 PPSFDFKSYMLQKANSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELV 133
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ S+AM ACA+ ++ TM++I DDLPC+DNDDLRRGKP+NH VFGE A+LA AL
Sbjct: 134 GGNDSMAMPAACAVGMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLA 193
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIH 176
A +HIA + N++S A+G+EG+ AGQ++DINSEG EV L +L FIH
Sbjct: 194 FAFEHIA-VSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIH 252
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
HKT K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E+ +
Sbjct: 253 IHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARGIGLLFQVVDDILDVTKSSQELGKTA 312
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D++ DK TYPKL+GI+ S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 313 GKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 365
>gi|4322331|gb|AAD16018.1| geranylgeranyl diphosphate synthase [Taxus canadensis]
gi|44972242|gb|AAS49033.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|45505274|gb|AAS67008.1| geranylgeranyl diphosphate synthase [Taxus x media]
gi|86277807|gb|ABC88389.1| geranylgeranyl diphosphate synthase [Taxus wallichiana]
Length = 393
Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 203/296 (68%), Gaps = 16/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F NEY KA ++ ALD+A+PL +P +HE+MRYSL GGKR+ LCIA+CE++GGS
Sbjct: 99 FDFNEYMKSKAVAVDAALDKAIPLEYPEKIHESMRYSLLAGGKRVRPALCIAACELVGGS 158
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q +AM ACA+E++ TM++I DDLPC+DNDD RRGKP+NHKVFGE TA+LA AL A
Sbjct: 159 QDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAF 218
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + S +GS+G+ GQ++DI SEG V L L +IH HK
Sbjct: 219 EHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHK 278
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+VSG I+GG E+EI R+R + + VG+ +Q+ +DI+DV S E KT G+D
Sbjct: 279 TAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKD 338
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
++ DKATYPKL+G++ +K+ A EL AK+EL+ FD +AAPL L ++I +F N
Sbjct: 339 LLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYI-AFRQN 393
>gi|356538045|ref|XP_003537515.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 355
Score = 293 bits (749), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/298 (48%), Positives = 209/298 (70%), Gaps = 15/298 (5%)
Query: 5 QRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCI 63
Q DT P F Y KA +N+ALD A+ L P +H+AMRYSL GGKR+ LCI
Sbjct: 54 QLQDT-PLNFDFKGYMIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCI 112
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+CE++GG+++ A+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA
Sbjct: 113 AACELVGGTEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLA 172
Query: 124 CQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
AL A +H+A +++A + ++G+EG+ AGQ++DI+SEG V L
Sbjct: 173 GDALLAFAFEHVAASTEGVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGLET 232
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L FIH HKT +EA++V G I+GGG++EE+E++R F + +G+ +Q+ +DI+DV S E
Sbjct: 233 LEFIHVHKTAALLEAAVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEE 292
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D++ DK TYPKL+GID SK+ A+EL+ +AK++L+ FDP +AAPL L N+I
Sbjct: 293 LGKTAGKDLVADKVTYPKLLGIDKSKEFAQELLKDAKEQLSGFDPPKAAPLFALTNYI 350
>gi|449461425|ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
gi|449514740|ref|XP_004164466.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 363
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 206/289 (71%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY K +N ALD AV L P +HEAMRYSL GGKR+ LCIA+CE++GG+
Sbjct: 70 FNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLCIAACELVGGN 129
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 130 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAF 189
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA I++A + ++G+EG+ AGQ++DINSEG + L +L +IH HKT
Sbjct: 190 EHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLEQLEYIHLHKT 249
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDM 239
+EA++V G I+GGG+ E++E++RNF +Y+G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 250 AALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSNELGKTAGKDL 309
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A++L +A+++L+ FDP +AAPL L N+I
Sbjct: 310 VADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYI 358
>gi|356498416|ref|XP_003518048.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 350
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/292 (48%), Positives = 202/292 (69%), Gaps = 14/292 (4%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA +N+ALD++V L P +HEAMRYSL GGKR+ LC+A+CE++
Sbjct: 54 PPIFDFKNYMLSKASAVNKALDDSVSLREPKKIHEAMRYSLLAGGKRVRPVLCVAACELV 113
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG ++ AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NH VFGE A+LA AL
Sbjct: 114 GGHEATAMPAACALEMIHTMSLIHDDLPCMDNDDLRRGKPTNHTVFGEDVAVLAGDALLA 173
Query: 130 LAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHR 177
A +HIA I++A + ++GSEG+ AGQ++DINSEG +V L L FIH
Sbjct: 174 FAFEHIAASTRGASAPRILRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHV 233
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTG 236
HKT +E ++V G I+GGG ++E+E++R F +Y+G+ +Q+ +DI+DV S E+ + G
Sbjct: 234 HKTAALLEGAVVLGAILGGGTDDEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAG 293
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D++ DK TYPKL+GI+ SK+ A +L +A+ +LA FDP +AAPL L N+I
Sbjct: 294 KDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLAGFDPVKAAPLIALANYI 345
>gi|229915240|gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
Length = 369
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 203/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALD AV L P ++HEAMRYSL GGKR+ LC+++CE++GG
Sbjct: 76 FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLCLSACELVGGD 135
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+SVAM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 136 ESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAYAF 195
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A II+A + ++GSEG+ AGQ++DI+SEG V L +L FIH HKT
Sbjct: 196 EHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKT 255
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EAS+V G I+GGG +E++E +R+F + +G+ +Q +DI+DV S E+ + G+D+
Sbjct: 256 AALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQELGKTAGKDL 315
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYP+L+GI+ S++ A++L EA++ L FDP +AAPL L N+I
Sbjct: 316 VADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYI 364
>gi|374639387|gb|AEZ55682.1| geranylgeranyl diphosphate synthase 2 [Salvia miltiorrhiza]
Length = 346
Score = 290 bits (743), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/306 (50%), Positives = 217/306 (70%), Gaps = 15/306 (4%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMST 60
I Q+ + F+ EY A KAK++N ALD+AVPL +P +H+AMRYSL GGKR+
Sbjct: 42 IEMQQTLKISPNFKFEEYMASKAKKVNTALDDAVPLQNPLKIHQAMRYSLLAGGKRVRPV 101
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LC+ASCE++GG ++ A+ MACA+E++ TM++I DDLPC+DNDDLRRG+P+ HK FGE TA
Sbjct: 102 LCLASCELVGGEEAAAVPMACALEMIHTMSLIHDDLPCMDNDDLRRGRPTCHKEFGEETA 161
Query: 121 ILACQALHCLAMQHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGKEVS 168
+LA AL LA +H+A K +N++ SAVGSEG+ AGQI+D++SEGK +S
Sbjct: 162 VLAGDALLALAFEHVA-AKTRNVDERRVVQAIVELGSAVGSEGLVAGQIVDLSSEGKLLS 220
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
L EL +IH HKT K +EA++V G I+GGG ++E +R + + VG+ +Q+ +DI+DV +
Sbjct: 221 LGELEYIHVHKTSKLLEAAVVCGAIMGGGGGAQVEALRKYARCVGLLFQVVDDILDVTKT 280
Query: 229 PEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
E KT G+D++ DKATYP+L+G+ +K A +L A A QEL+YFDP+RAAPL HL +
Sbjct: 281 SEELGKTAGKDLVTDKATYPRLMGLRKAKDFAADLAAMAVQELSYFDPSRAAPLYHLAQY 340
Query: 288 IVSFGN 293
I S N
Sbjct: 341 IASRQN 346
>gi|295322739|gb|ADG01841.1| geranylgeranyl-diphosphate synthase [Medicago sativa]
Length = 370
Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/289 (48%), Positives = 205/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA ++N+ALD+AV L P +HEAMRYSL GGKR+ LC+A+CE++GG+
Sbjct: 77 FNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGT 136
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 137 EPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAF 196
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA+ A + ++GSEG+ AGQ++DINSEG +V L +L FIH HKT
Sbjct: 197 EHIAVSTAGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLEQLEFIHLHKT 256
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E ++V G I+GGG++E++E++R F +Y+G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 257 AALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDL 316
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ SK+ A++L +A+++L+ FD ++APL L N+I
Sbjct: 317 VADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYI 365
>gi|17352451|gb|AAL17614.2|AF425235_1 geranylgeranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 210/316 (66%), Gaps = 28/316 (8%)
Query: 1 IINSQRNDTLPKF-------------FQVNEYKALKAKQINEALDEAVPLPHPAILHEAM 47
+ +S+ ++T+ KF F EY KA +NEALD AVPL +P +HEAM
Sbjct: 63 VSSSRYSNTIAKFTNLPEKVKEKVIEFDFKEYLRSKAMAVNEALDRAVPLRYPERIHEAM 122
Query: 48 RYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRR 106
RYSL GGKR+ LCI++CE++GG++ VAM ACA+E++ TM++I DDLPC+DNDD RR
Sbjct: 123 RYSLLAGGKRVRPVLCISACELVGGTEEVAMPTACAMEMIHTMSLIHDDLPCMDNDDFRR 182
Query: 107 GKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AVGSEGIAA 154
GKP+NHKVFGE TAILA AL A +HIA+ +K++ + +GS+G+
Sbjct: 183 GKPTNHKVFGEGTAILAGDALLSFAFEHIAVSTSKSVGTDRILRVVSELGRTIGSQGLVG 242
Query: 155 GQIMDINSEGK-EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVG 213
GQ+ DI SEG V L L +IH HKT +E S++ G II G ++ EIER++ + + VG
Sbjct: 243 GQVADITSEGDASVDLDTLEWIHIHKTAVLLECSVMCGAIISGASDNEIERIQRYARSVG 302
Query: 214 MAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAY 272
+ +Q+ +DI+DV S E+ + G+D++ DKATYPKL+G++ +K+ A +L+ AK++L+
Sbjct: 303 LLFQVVDDILDVTKSSKELGKTAGKDLISDKATYPKLMGLEKAKQFASDLLIRAKEDLSC 362
Query: 273 FDPTRAAPLDHLVNFI 288
FDP +AAPL L ++I
Sbjct: 363 FDPMKAAPLLGLADYI 378
>gi|380039815|gb|AFD32422.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 393
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 202/296 (68%), Gaps = 16/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F NE+ KA ++ ALD+A+PL +P +HE MRYSL GGKR+ LCIA+CE++GGS
Sbjct: 99 FDFNEHMKSKAVAVDAALDKAIPLEYPEKIHEPMRYSLLAGGKRVRPALCIAACELVGGS 158
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q +AM ACA+E++ TM++I DDLPC+DNDD RRGKP+NHKVFGE TA+LA AL A
Sbjct: 159 QDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAF 218
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + S +GS+G+ GQ++DI SEG V L L +IH HK
Sbjct: 219 EHIAVATSKTVPSDRTLRVISELGKTIGSQGLVGGQVVDIASEGDANVDLKTLEWIHIHK 278
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+VSG I+GG E+EI R+R + + VG+ +Q+ +DI+DV S E KT G+D
Sbjct: 279 TAVLLECSVVSGGILGGATEDEIARIRRYARCVGLLFQVVDDILDVTKSSEELGKTAGKD 338
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
++ DKATYPKL+G++ +K+ A EL AK+EL+ FD +AAPL L ++I +F N
Sbjct: 339 LLTDKATYPKLMGLEKAKEFAAELATRAKEELSSFDQIKAAPLLGLADYI-AFRQN 393
>gi|558925|gb|AAA86688.1| geranylgeranyl pyrophosphate synthase [Lupinus albus]
Length = 316
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 204/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y K++ +N+AL++AV L P +HEAMRYSL GGKR+ LCIA+CE++GG+
Sbjct: 23 FNFNLYMVEKSRSVNQALNDAVSLREPHKIHEAMRYSLLAGGKRVRPVLCIAACEVVGGN 82
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM+ AC+IE++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 83 ESTAMAAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENIAVLAGDALLAFAF 142
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+HIA+ + + ++G+EG+ AGQ++DINSEG ++ L +L FIH HKT
Sbjct: 143 EHIAVSTSGVSPERIIGAIGELAKSIGTEGLVAGQVVDINSEGLCDIGLEKLEFIHLHKT 202
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E S+V G I+GGG EE+E++R F +Y+G+ +Q+ +D++DV S E+ + G+D+
Sbjct: 203 AALLEGSVVVGAILGGGCNEEVEKLRMFARYIGLMFQVVDDVLDVTKSSKELGKTAGKDL 262
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S + A++L +A+++L+ FDP + APL L N+I
Sbjct: 263 VADKVTYPKLLGIEKSNEFAQKLNRDAQEQLSGFDPVKVAPLIALANYI 311
>gi|168203181|gb|ACA21461.1| geranylgeranyl diphosphate synthase 5 [Picea abies]
gi|224285639|gb|ACN40538.1| unknown [Picea sitchensis]
Length = 382
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 201/296 (67%), Gaps = 16/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY KA +NEALD AV L +P +HEAMRYSL GGKR+ LCIA+CE++GG+
Sbjct: 88 FDFKEYLLSKAMAVNEALDRAVQLRYPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGT 147
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+DNDD RRGKP+NHKVFGE TA+LA AL A
Sbjct: 148 EKLAMPTACAMEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVFGEGTAVLAGDALLSFAF 207
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K++ S +GS+G+ GQ+ DI SEG V L L +IH HK
Sbjct: 208 EHIAVSTSKSVGSDRILRVVSELGRTIGSQGLVGGQVADITSEGNASVDLDTLEWIHIHK 267
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRD 238
T +E S+V G II G +E EIER++ + + VG+ +Q+ +DI+DV S E+ + G+D
Sbjct: 268 TAVLLECSVVCGAIISGASENEIERVKRYARSVGLLFQVVDDILDVTKSSKELGKTAGKD 327
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
++ DKATYPKL+G++ +K+ A EL+ AK+ L+ FDP +AAPL L ++I +F N
Sbjct: 328 LISDKATYPKLMGLEKAKQFAVELLDRAKENLSCFDPMKAAPLLGLADYI-AFRQN 382
>gi|15234534|ref|NP_195399.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
gi|13432144|sp|P34802.2|GGPP1_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 1, chloroplastic; Short=GGPP synthase 1;
Short=GGPS1; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase 1; AltName: Full=Dimethylallyltranstransferase
1; AltName: Full=Farnesyl diphosphate synthase 1;
AltName: Full=Farnesyltranstransferase 1; AltName:
Full=Geranyltranstransferase 1; Flags: Precursor
gi|2464899|emb|CAB16803.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|7270630|emb|CAB80347.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|110742524|dbj|BAE99179.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|332661305|gb|AEE86705.1| geranylgeranyl pyrophosphate synthase 11 [Arabidopsis thaliana]
Length = 371
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 201/296 (67%), Gaps = 18/296 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA+ +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++
Sbjct: 71 PSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 130
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 131 GGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 190
Query: 130 LAMQHIAIIKAKNINS-------------AVGSEGIAAGQIMDINSEG---KEVSLSELN 173
A +H+A + ++ S A+G+EG+ AGQ++DI+SEG +V L L
Sbjct: 191 FAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 250
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMR 232
FIH HKT +EAS V G I+GGG+++EIER+R F + +G+ +Q+ +DI+DV S E+
Sbjct: 251 FIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 310
Query: 233 EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ G+D++ DK TYPK++G++ S++ A++L EA+ +L FD + APL L N+I
Sbjct: 311 KTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366
>gi|357518399|ref|XP_003629488.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|295322741|gb|ADG01842.1| geranylgeranyl-diphosphate synthase [Medicago truncatula]
gi|355523510|gb|AET03964.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 372
Score = 286 bits (733), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/289 (48%), Positives = 205/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA ++N+ALD+AV L P +HEAMRYSL GGKR+ LC+A+CE++GG+
Sbjct: 79 FNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGT 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 139 EPMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAF 198
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA I++A + ++GSEG+ AGQ++DINSEG +V L L FIH HKT
Sbjct: 199 EHIAVSTVDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E ++V G I+GGG++E++E++R F Y+G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 259 AALLEGAVVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDL 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ SK+ A++L +A+++L+ FD ++APL L N+I
Sbjct: 319 VADKVTYPKLLGIEKSKEFAEKLNRDAQEQLSGFDLNKSAPLIALANYI 367
>gi|157965847|gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
Length = 373
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 140/291 (48%), Positives = 204/291 (70%), Gaps = 14/291 (4%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
+ F Y KA +N+ALD AV L P +HEAMRYSL GGKR+ LCIA+CE++G
Sbjct: 78 RTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVRPMLCIAACELVG 137
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
G++S+AM AC++E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 138 GTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAF 197
Query: 131 AMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRH 178
+ +HIA I++A + ++G+EG+ AGQ++DI SEG +V L L FIH H
Sbjct: 198 SFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSDVGLEHLEFIHLH 257
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGR 237
KT +E ++V G I+GGG+ EE+E++RNF +Y+G+ +Q+ +DI+DV S E+ + G+
Sbjct: 258 KTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGK 317
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
D++ DK TYPKL+G++ S++ A++L +A+ +LA FD +AAPL L N+I
Sbjct: 318 DLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALANYI 368
>gi|6277254|dbj|BAA86284.1| geranylgeranyl pyrophosphate synthase [Croton sublyratus]
Length = 368
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/297 (47%), Positives = 203/297 (68%), Gaps = 14/297 (4%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
+N + F Y KA IN+AL+ AV L P +HE+MRYSL GGKR+ LC+A
Sbjct: 67 KNSSSSLGFDFKSYMVQKASAINQALEAAVSLREPLKIHESMRYSLLAGGKRVRPALCLA 126
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
+CE++GG +S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NH VFGE A+LA
Sbjct: 127 ACELVGGDESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGENVAVLAG 186
Query: 125 QALHCLAMQHIAIIK-----------AKNINSAVGSEGIAAGQIMDINSEG-KEVSLSEL 172
AL A +HIA+ + A+G+EG+ AGQ++DI SEG EV L +L
Sbjct: 187 DALLAFAFEHIAVSTLNVSPVRIVRGVGELAKAIGAEGLVAGQVVDICSEGLSEVDLEKL 246
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEM 231
FIH HKT K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E+
Sbjct: 247 EFIHIHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQEL 306
Query: 232 REKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ G+D++ DK TYPKL+GI+ S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 307 GKTAGKDLVADKVTYPKLMGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 363
>gi|226510660|gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
Length = 365
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/289 (49%), Positives = 201/289 (69%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K +N+ALD AV L P +HEAMRYSL GGKR+ LC+A+CE++GG
Sbjct: 72 FNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGGH 131
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 132 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFAF 191
Query: 133 QHIA-----IIKAKNINS------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA + A+ + S ++GSEG+ AGQ++DI SEG +V L +L FIH HKT
Sbjct: 192 EHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHKT 251
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EAS+V G I+GGG++ EIE++R F +Y+G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 252 AALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKDL 311
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A +L +A+ L+ FDP +AAPL L N+I
Sbjct: 312 VADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYI 360
>gi|225430848|ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 368
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 204/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y KA +N+ALD+AVP+ P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 75 FNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGD 134
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE AILA AL A
Sbjct: 135 EATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAF 194
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A I++A + ++GSEG+ AGQ++DI SEG K+V L L +IH HKT
Sbjct: 195 EHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKT 254
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E ++V G I+GGG+ EEIE++R F + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 255 AALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDL 314
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A++L +AK +L+ FDP +AAPL L N+I
Sbjct: 315 VADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYI 363
>gi|147843373|emb|CAN78430.1| hypothetical protein VITISV_032031 [Vitis vinifera]
Length = 308
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/289 (49%), Positives = 204/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y KA +N+ALD+AVP+ P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 15 FNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLLAGGKRVRPVLCIAACELVGGD 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE AILA AL A
Sbjct: 75 EATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAILAGDALLAFAF 134
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A I++A + ++GSEG+ AGQ++DI SEG K+V L L +IH HKT
Sbjct: 135 EHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDICSEGLKDVGLEHLEYIHVHKT 194
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E ++V G I+GGG+ EEIE++R F + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 195 AALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDL 254
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A++L +AK +L+ FDP +AAPL L N+I
Sbjct: 255 VADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKAAPLIALSNYI 303
>gi|224133886|ref|XP_002327704.1| predicted protein [Populus trichocarpa]
gi|222836789|gb|EEE75182.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 202/289 (69%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALD AV L PA +HE+MRYSL GGKR+ LC+A+CE++GGS
Sbjct: 73 FDFKSYMIQKANSVNKALDTAVTLKEPAKIHESMRYSLLAGGKRVRPVLCLAACELVGGS 132
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM ACA+E++ TM++I DDLPC+DNDDLRRGK +NH VFGE A+LA AL A
Sbjct: 133 ESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKSTNHIVFGEDVAVLAGDALLAFAF 192
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA I++A + +G+EG+ AGQ++DI SEG EV L +L FIH HKT
Sbjct: 193 EHIAVSTLNVSPLRIVRAVGELAKVIGAEGLVAGQVVDICSEGLSEVGLEQLEFIHIHKT 252
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 253 AKLLEGAVVLGAILGGGTDEEVEKLRRYARSIGLLFQVVDDILDVTKSSQELGKTAGKDL 312
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A++L+ EA++ LA FD +AAPL L N+I
Sbjct: 313 VADKVTYPKLMGIEKSREFAEKLLNEARELLAGFDQEKAAPLIALANYI 361
>gi|307950755|gb|ACA21458.2| geranyl diphosphate synthase 2 [Picea abies]
Length = 386
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/295 (48%), Positives = 203/295 (68%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++Y KA +NEALD+ +P +P ++E+MRYSL GGKR+ LCIA+CE++GG+
Sbjct: 92 FDFDKYMHSKAIAVNEALDKVIPPRYPQKIYESMRYSLLAGGKRVRPILCIAACELMGGT 151
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACAIE++ TM++I DDLP +DNDDLRRGKP+NHKVFGE TAI+A AL LA
Sbjct: 152 EELAMPTACAIEMIHTMSLIHDDLPYIDNDDLRRGKPTNHKVFGEDTAIIAGDALLSLAF 211
Query: 133 QHIAIIKAKN------------INSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+H+A+ ++ I A GSEG+ GQ++DI SEG + L L ++H HK
Sbjct: 212 EHVAVSTSRTLGTDIILRLLSEIGRATGSEGVMGGQVVDIESEGDPSIDLETLEWVHIHK 271
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+V G I+GG +E++IER R + + VG+ +Q+ +DI+DV S E KT G+D
Sbjct: 272 TAVLLECSVVCGAIMGGASEDDIERARRYARCVGLLFQVVDDILDVSQSSEELGKTAGKD 331
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DKATYPKL+G++ +K+ A EL+ KQEL+ FDPT+AAPL L ++I S N
Sbjct: 332 LISDKATYPKLMGLEKAKEFADELLNRGKQELSCFDPTKAAPLFALADYIASRQN 386
>gi|22535961|gb|AAN01135.1| geranyl diphosphate synthase [Abies grandis]
Length = 387
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/290 (48%), Positives = 198/290 (68%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N+Y KA + EALD+A+P +P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 93 FDFNKYMLSKAMAVTEALDKAIPHSYPQKIHESMRYSLLAGGKRVRPVLCIAACELVGGR 152
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFG+ TA+LA ALH A
Sbjct: 153 EELAMPTACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGQDTALLAGDALHAFAF 212
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHK 179
+HI +K++ S A G +GI GQI+DI SE V L L +IH HK
Sbjct: 213 EHIVAFTSKSVGSDGILRAVTELARATGPQGIMGGQIVDIASERDAFVDLQTLEWIHIHK 272
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T E + V G IIGG + +EIER+R F +Y+G+ +Q+ +DI+DV S E KT G+D
Sbjct: 273 TAVLFECATVCGAIIGGASGDEIERIRRFARYLGLLFQVVDDILDVTKSSEDLGKTAGKD 332
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DKATYPKL+G++ +K + EL+ +AK+EL+ FDP +AAPL L +++
Sbjct: 333 LVSDKATYPKLMGLEKAKGFSLELLNKAKEELSCFDPMKAAPLFGLADYM 382
>gi|237783596|gb|ACR19637.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 205/301 (68%), Gaps = 17/301 (5%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMST 60
+++QR+D F N Y KA +N+ALD+AV + +P ++H+AMRYSL GGKR+
Sbjct: 62 VSTQRDDAP---FNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPM 118
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LCIA+CE++GG QS A+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A
Sbjct: 119 LCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVA 178
Query: 121 ILACQALHCLAMQHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVS 168
+LA AL A + +A + + A+G+EG+ AGQ++D+N G V
Sbjct: 179 VLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVG 238
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
L L FIH HKT +EAS+V G I+GGG+ ++IE++R F + +G+ +Q+ +DI+DV S
Sbjct: 239 LDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLFQVVDDILDVTKS 298
Query: 229 PEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
E KT G+D+ DK TYPKL+G+D + + A++L EAK +LA FDP++AAPL L ++
Sbjct: 299 SEELGKTAGKDLAVDKTTYPKLLGLDKAMEFAEKLNEEAKAQLAGFDPSKAAPLTALADY 358
Query: 288 I 288
I
Sbjct: 359 I 359
>gi|22535959|gb|AAN01134.1| geranyl diphosphate synthase [Abies grandis]
Length = 381
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/296 (47%), Positives = 204/296 (68%), Gaps = 16/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N+Y KA +NEAL++A+PL +P ++E+MRYSL GGKR+ LCIA+CE++GG+
Sbjct: 87 FDFNKYMDSKAMTVNEALNKAIPLRYPQKIYESMRYSLLAGGKRVRPVLCIAACELVGGT 146
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACAIE++ TM+++ DDLPC+DNDDLRRGKP+NHK+FGE TA+ A ALH A
Sbjct: 147 EELAIPTACAIEMIHTMSLMHDDLPCIDNDDLRRGKPTNHKIFGEDTAVTAGNALHSYAF 206
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ +K + + A GSEG+ GQ++DI SEG + L L +IH HK
Sbjct: 207 EHIAVSTSKTVGADRILRMVSELGRATGSEGVMGGQMVDIASEGDPSIDLQTLEWIHIHK 266
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRD 238
T +E S+V G IIGG +E IER R + + VG+ +Q+ +DI+DV S E+ + G+D
Sbjct: 267 TAMLLECSVVCGAIIGGASEIVIERARRYARCVGLLFQVVDDILDVTKSSDELGKTAGKD 326
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
++ DKATYPKL+G++ +K+ + EL+ AK EL+ FDP +AAPL L ++ V+F N
Sbjct: 327 LISDKATYPKLMGLEKAKEFSDELLNRAKGELSCFDPVKAAPLLGLADY-VAFRQN 381
>gi|302770449|ref|XP_002968643.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
gi|300163148|gb|EFJ29759.1| hypothetical protein SELMODRAFT_231193 [Selaginella moellendorffii]
Length = 327
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/290 (51%), Positives = 201/290 (69%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI-GG 71
F + Y K +N ALDEA+P+ +P +HEAMRYSL GGKR+ LCIA+ EMI GG
Sbjct: 33 FDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGG 92
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+Q AM A A+E++ TM++I DDLPC+DNDDLRRGKP+ HK FGE TA+LA A+ LA
Sbjct: 93 TQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLA 152
Query: 132 MQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHK 179
+HIA A + SAVGS+G+ AGQI+DI EGKE V L L +IH HK
Sbjct: 153 FEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDMLRYIHIHK 212
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRD 238
TGK +EA+ V G I GG +EEE+ R+R++ + VG+ +Q+ +DI+DV S E+ + G+D
Sbjct: 213 TGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKD 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DK TYPKL+G+ G++ +A+EL+AEAKQ+LA F +RAAPL L ++I
Sbjct: 273 LISDKTTYPKLLGLQGARDYAEELLAEAKQQLAAFGESRAAPLLALADYI 322
>gi|357483275|ref|XP_003611924.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
gi|355513259|gb|AES94882.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
Length = 371
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/296 (49%), Positives = 201/296 (67%), Gaps = 15/296 (5%)
Query: 8 DTLPKF-FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIAS 65
+T+P F F N Y KA +N+ALDEA+ L P ++EAMRYSL GGKR+ LCIA+
Sbjct: 71 ETIPNFNFNFNGYMLEKANIVNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCIAA 130
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
C ++GG + ++ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA
Sbjct: 131 CGLVGGKEEASIPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGD 190
Query: 126 ALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKE-VSLSELN 173
AL A +H+A I++A + AVG EG+ AGQI+D+ SEGK V L L
Sbjct: 191 ALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLE 250
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMRE 233
FIH KT +EA++V G I+GGG E+EIE++R F +Y+G+ +Q+ +DI+DV S E
Sbjct: 251 FIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEELG 310
Query: 234 KT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DKATYPKL+G++ SK+ A +LI +A L FD +AAPL L N+I
Sbjct: 311 KTAGKDLTADKATYPKLLGLEKSKEFADKLIKDAHDCLIGFDVEKAAPLVALTNYI 366
>gi|87299435|dbj|BAE79550.1| geranylgeranyl pyrophosphate synthase [Chrysanthemum x morifolium]
Length = 345
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 201/301 (66%), Gaps = 13/301 (4%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
++ L F Y KA +N+ALD+AVP+ P +HE+MRYSL GGKR+ LC+A
Sbjct: 45 KHTQLESEFDFKSYMVQKANTVNQALDDAVPIREPKKIHESMRYSLLAGGKRVRPILCLA 104
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
SCE++GG Q AM ACA+E++ TM+++ DDLPC+DNDD RRGKP+NH V+GE A+LA
Sbjct: 105 SCELVGGDQISAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHIVYGEEIAVLAG 164
Query: 125 QALHCLAMQHIAI----IKAKNINSA-------VGSEGIAAGQIMDINSEGKEVSLSELN 173
AL A +H+A + A+ I A +GSEG+ AGQ++DI SEG +V L L
Sbjct: 165 DALLSFAFEHVATATKDVSAERIVRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLE 224
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMRE 233
FIH HKT +E S+V G I+GGG++ E+ER+R F + +G+ +Q+ +DI+DV S E
Sbjct: 225 FIHLHKTAALLEGSVVLGAIMGGGSDVEVERLRKFVRSIGLLFQVVDDILDVTKSSEELG 284
Query: 234 KT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFG 292
KT G+D++ DK TYPKL+GI+ S++ A++L EA+++L FD +AAPL L N+I
Sbjct: 285 KTAGKDLVADKTTYPKLLGIEKSREFAEKLNKEAQEQLKEFDIRKAAPLIALANYIAYRD 344
Query: 293 N 293
N
Sbjct: 345 N 345
>gi|449497746|ref|XP_004160506.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 340
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 205/298 (68%), Gaps = 14/298 (4%)
Query: 5 QRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCI 63
++ND F+ +Y K+ +N+ALDEAV L P +HEAMRYSL GGKR+ LC+
Sbjct: 38 EQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCL 97
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+C+++GGS+S A+ AC+IE++ TM++I DDLPC+DNDDLRRGKP+NH++FGE A+LA
Sbjct: 98 AACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLA 157
Query: 124 CQALHCLAMQHIAIIKAK-----------NINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
AL A +H+A KA+ + A G+ G+ AGQ++DI+SEG +V L
Sbjct: 158 GDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLEL 217
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EA+ V G I+GGG+EEEIE++R F + +G+ +Q+ +DI+DV S E
Sbjct: 218 LEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEE 277
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ +KATYPKL+GI+ SK+ A++L EA + LA FDP +A PL L N+I
Sbjct: 278 LGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYI 335
>gi|449448558|ref|XP_004142033.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Cucumis sativus]
Length = 375
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/298 (48%), Positives = 205/298 (68%), Gaps = 14/298 (4%)
Query: 5 QRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCI 63
++ND F+ +Y K+ +N+ALDEAV L P +HEAMRYSL GGKR+ LC+
Sbjct: 73 EQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCL 132
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+C+++GGS+S A+ AC+IE++ TM++I DDLPC+DNDDLRRGKP+NH++FGE A+LA
Sbjct: 133 AACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLA 192
Query: 124 CQALHCLAMQHIAIIKAK-----------NINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
AL A +H+A KA+ + A G+ G+ AGQ++DI+SEG +V L
Sbjct: 193 GDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLEL 252
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EA+ V G I+GGG+EEEIE++R F + +G+ +Q+ +DI+DV S E
Sbjct: 253 LEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEE 312
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ +KATYPKL+GI+ SK+ A++L EA + LA FDP +A PL L N+I
Sbjct: 313 LGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYI 370
>gi|22535957|gb|AAN01133.1| geranyl diphosphate synthase [Abies grandis]
Length = 383
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/290 (50%), Positives = 198/290 (68%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY KA +NEAL+ AVPL +P +HEAMRYSL GGKR+ L IA+CE++GGS
Sbjct: 89 FDFKEYLHSKAISVNEALERAVPLRYPEKIHEAMRYSLLAGGKRIRPILTIAACELVGGS 148
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLP +DNDDLRRGK +NHKVFGE TA+LA AL A
Sbjct: 149 EELAMPTACAMEMIHTMSLIHDDLPSMDNDDLRRGKLTNHKVFGEGTAVLAGDALLSFAF 208
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+HIA+ K + S A+GS+G+A GQ+ DI SEG V L L +IH HK
Sbjct: 209 EHIAVSTRKTVASHRVLRVVSELGKAIGSQGVAGGQVADITSEGDPSVGLETLEWIHIHK 268
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E ++VSG IIGG +E EIER + + VG+ +Q+ +DI+DV S E KT G+D
Sbjct: 269 TAVLLECAVVSGAIIGGASENEIERTGRYARCVGLLFQVVDDILDVTRSSEELGKTAGKD 328
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DKATYPKL+G++ +K+ A EL+ AK+EL+ F+P +AAPL L ++I
Sbjct: 329 LVSDKATYPKLMGLEKAKEFADELLDRAKEELSCFNPAKAAPLLGLADYI 378
>gi|224096916|ref|XP_002310785.1| predicted protein [Populus trichocarpa]
gi|222853688|gb|EEE91235.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/298 (47%), Positives = 205/298 (68%), Gaps = 18/298 (6%)
Query: 5 QRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCI 63
QR T F Y KA +N+ALD AV L PA +HE+MRYSL GGKR+ LC+
Sbjct: 67 QRKPT----FDFKSYMLQKANSVNKALDAAVSLKEPAKIHESMRYSLLAGGKRVRPVLCL 122
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+C+++GGS+S+A+ ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NH VFGE A+LA
Sbjct: 123 AACDLVGGSESMALPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLA 182
Query: 124 CQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
AL A +HIA I++A + A+G+EG+ AGQ++DI SEG EV L +
Sbjct: 183 GDALLSFAFEHIAVSTIHVSPLRIVRAIGELAKAIGAEGLVAGQVVDICSEGLSEVGLEQ 242
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPE 230
L FIH HKT K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E
Sbjct: 243 LEFIHVHKTAKLLEGAVVLGAILGGGTDEEVEKLRTYARSIGLLFQVVDDILDVTKSSQE 302
Query: 231 MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ + G+D++ DK TYP+L+GI+ S++ A+ L+ EAK LA F+ +AAPL L N+I
Sbjct: 303 LGKTAGKDLVADKVTYPRLMGIEKSREFAERLLNEAKDMLAGFNQEKAAPLIALANYI 360
>gi|13431547|sp|Q43133.1|GGPPS_SINAL RecName: Full=Geranylgeranyl pyrophosphate synthase,
chloroplastic/chromoplastic; Short=GGPP synthase;
Short=GGPS; AltName: Full=(2E,6E)-farnesyl diphosphate
synthase; AltName: Full=Dimethylallyltranstransferase;
AltName: Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1419758|emb|CAA67330.1| geranylgeranyl pyrophosphate synthase [Sinapis alba]
Length = 366
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/297 (47%), Positives = 200/297 (67%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++GG
Sbjct: 70 FDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 129
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM CA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA AL A
Sbjct: 130 ESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAF 189
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHR 177
+H+A + ++ A+G+EG+ AGQ++DI+SEG + V L L FIH
Sbjct: 190 EHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHL 249
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTG 236
HKT +EAS V G IIGGG++EEIER+R F + +G+ +Q+ +DI+DV S E+ + G
Sbjct: 250 HKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAG 309
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D++ DK TYPKL+G++ S++ A++L EA+ +L FD + APL L N+I + N
Sbjct: 310 KDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
>gi|413730|gb|AAA32797.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/296 (46%), Positives = 199/296 (67%), Gaps = 18/296 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA+ +N+ALD AVPL P +HEAM YSL GGKR+ LCIA+CE++
Sbjct: 71 PSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMSYSLLAGGKRVRPVLCIAACELV 130
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM CA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 131 GGEESTAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 190
Query: 130 LAMQHIAIIKAKNINS-------------AVGSEGIAAGQIMDINSEG---KEVSLSELN 173
+ +H+A + ++ S A+G+EG+ AGQ++DI+SEG +V L L
Sbjct: 191 FSFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 250
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMR 232
FIH HKT +EAS V G I+GGG+++EIER+R F + +G+ +Q+ +DI+DV S E+
Sbjct: 251 FIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 310
Query: 233 EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ G+D++ DK TYPK++G++ S++ A++L EA+ +L FD + APL L N+I
Sbjct: 311 KTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366
>gi|302816429|ref|XP_002989893.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
gi|300142204|gb|EFJ08906.1| hypothetical protein SELMODRAFT_235899 [Selaginella moellendorffii]
Length = 366
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/290 (50%), Positives = 200/290 (68%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI-GG 71
F + Y K +N ALDEA+P+ +P +HEAMRYSL GGKR+ LCIA+ EMI GG
Sbjct: 72 FDLQSYLQFKGVAVNAALDEALPMRYPDKIHEAMRYSLLAGGKRVRPILCIAASEMIPGG 131
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+Q AM A A+E++ TM++I DDLPC+DNDDLRRGKP+ HK FGE TA+LA A+ LA
Sbjct: 132 TQEAAMPSAIAMEMIHTMSLIHDDLPCMDNDDLRRGKPTCHKAFGEDTAVLAGDAMLSLA 191
Query: 132 MQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHK 179
+HIA A + SAVGS+G+ AGQI+DI EGKE V L L +IH HK
Sbjct: 192 FEHIARCSAGVPAERVVRIVSELGSAVGSQGLVAGQIVDIACEGKEGVDLDTLRYIHIHK 251
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRD 238
TGK +EA+ V G I GG +EEE+ R+R++ + VG+ +Q+ +DI+DV S E+ + G+D
Sbjct: 252 TGKLLEAAGVCGAIAGGASEEEVGRVRSYSQAVGLLFQVVDDILDVTKSSQELGKTAGKD 311
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DK TYPKL+G+ G++ +A+EL+A AKQ+LA F +RAAPL L ++I
Sbjct: 312 LISDKTTYPKLLGLQGARDYAEELLAGAKQQLAAFGESRAAPLLALADYI 361
>gi|255568243|ref|XP_002525096.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223535555|gb|EEF37223.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 369
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/295 (49%), Positives = 209/295 (70%), Gaps = 14/295 (4%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
++ P F Y KA IN+ALD AVP+ P +HE+MRYSL GGKR+ LC+A+C
Sbjct: 70 NSRPPTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRVRPALCLAAC 129
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
E++GG++S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NH VFGE A+LA A
Sbjct: 130 ELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDA 189
Query: 127 LHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNF 174
L LA +HIA I++A + A+G+EG+ AGQ++DI SEG EV L +L F
Sbjct: 190 LLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLSEVGLEKLEF 249
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMRE 233
IH HKT K +E ++V G I+GGG +EE+E++R + + +G+ +Q+ +DI+DV S E+ +
Sbjct: 250 IHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGK 309
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D++ DK TYPKL+GID S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 310 TAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYI 364
>gi|290575614|gb|ADD49734.1| geranylgeranyl diphosphate synthase [Nicotiana tabacum]
Length = 366
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 196/289 (67%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A KA +N+ALDEAV + P ++HEAMRYSL GGKR+ LC+A+CE++GG
Sbjct: 73 FNFKTYVAEKAISVNKALDEAVIVKDPPVIHEAMRYSLLAGGKRVRPMLCLAACELVGGD 132
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
QS AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA +L A
Sbjct: 133 QSNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAFAF 192
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
++IA A + ++G+EG+ AGQ+ DI G V L L FIH HKT
Sbjct: 193 EYIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKT 252
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EAS+V G I+GGG +EE+E++R F + +G+ +Q+ +DI+DV S E+ KT G+D+
Sbjct: 253 AALLEASVVLGAILGGGTDEEVEKLRIFARCIGLLFQVVDDILDVTKSSEVLGKTAGKDL 312
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
DK TYPKL+G++ +K+ A EL +AKQ+L FDP +AAPL L ++I
Sbjct: 313 AVDKTTYPKLLGLEKAKEFAAELNRDAKQQLVEFDPHKAAPLIALADYI 361
>gi|9971808|gb|AAG10424.1| GGDP synthase [Tagetes erecta]
Length = 361
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/295 (47%), Positives = 200/295 (67%), Gaps = 14/295 (4%)
Query: 8 DTLPKF-FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIAS 65
+T KF F Y KA +N+ALD AVPL P +HE+MRYSL GGKR+ LCIA+
Sbjct: 62 ETQSKFEFDFKSYMLEKANLVNQALDLAVPLKDPIKIHESMRYSLLAGGKRVRPVLCIAA 121
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
CE++GG AM ACA+E++ TM+++ DDLPC+DNDD RRGKP+NH V+GE A+L
Sbjct: 122 CELVGGDGLTAMPAACAVEMIHTMSLMHDDLPCMDNDDFRRGKPTNHMVYGEEIAVLGGD 181
Query: 126 ALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
A+ A +H+A I++A + +GSEG+ AGQ++DI SEG +V L L F
Sbjct: 182 AMLSFAFEHMATATKGVSSDRILRAIGELAKCIGSEGLVAGQVVDICSEGADVGLEHLEF 241
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK 234
IH HKT +E S+V G I+GGG++ EIE++R F + +G+ +Q+ +DI+DV S E K
Sbjct: 242 IHLHKTAALLEGSVVLGAILGGGSDGEIEKLRKFARSIGLLFQVVDDILDVTKSSEELGK 301
Query: 235 T-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
T G+D++ DK TYPKL+GI+ S++ A+EL +A+++L+ FDP +AAPL L N+I
Sbjct: 302 TAGKDLVSDKTTYPKLLGIEKSREFAEELNKDAQEQLSEFDPRKAAPLIALANYI 356
>gi|336359762|gb|AEI53622.1| chloroplast geranylgeranyl diphosphate synthase [Catharanthus
roseus]
Length = 383
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 199/285 (69%), Gaps = 16/285 (5%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y KA +N+AL++AV + P +HE+MRYSL GGKR+ LCIA+CE+ GG++SVAM
Sbjct: 95 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAM 154
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A +HIA
Sbjct: 155 PSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA- 213
Query: 138 IKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFI 184
K ++S +GSEG+ AGQ++D+ SEG +V L L FIH HKT +
Sbjct: 214 TATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALL 273
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDK 243
E S+V G I+GG N+E+I ++R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK
Sbjct: 274 EGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADK 333
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
TYPKL+GID S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 334 VTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYI 378
>gi|215433848|gb|ACJ66778.1| geranylgeranyl diphosphate synthase [Salvia miltiorrhiza]
Length = 364
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/301 (46%), Positives = 204/301 (67%), Gaps = 17/301 (5%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMST 60
+++QR+D F N Y KA +N+ALD+AV + +P ++H+AMRYSL GGKR+
Sbjct: 62 VSTQRDDAP---FNFNAYVVEKANHVNKALDDAVAVRNPPMIHDAMRYSLLAGGKRVRPM 118
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LCIA+CE++GG QS A+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFG+ A
Sbjct: 119 LCIAACEIVGGPQSAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGKDVA 178
Query: 121 ILACQALHCLAMQHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVS 168
+LA AL A + +A + + A+G+EG+ AGQ++D+N G V
Sbjct: 179 VLAGDALLAFAFEFMATATTGVAPERILAAVGELAKAIGTEGLVAGQVVDLNCTGDANVG 238
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
L L FIH HKT +EAS+V G I+GGG+ ++IE++R F + +G+ Q+ +DI+DV S
Sbjct: 239 LDTLEFIHIHKTAALLEASVVLGAILGGGSSDQIEKLRTFARKIGLLLQVVDDILDVTKS 298
Query: 229 PEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
E KT G+D+ DK TYPKL+G+D + + A++L EAK +LA FDP++AAPL L ++
Sbjct: 299 SEELGKTAGKDLAVDKTTYPKLLGLDKAVEFAEKLNEEAKAQLAGFDPSKAAPLTALADY 358
Query: 288 I 288
I
Sbjct: 359 I 359
>gi|46241274|gb|AAS82860.1| geranyl diphosphate synthase large subunit [Antirrhinum majus]
Length = 372
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 206/307 (67%), Gaps = 17/307 (5%)
Query: 3 NSQRNDTLPKF-FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMST 60
+SQ+ P F Y KA +N+AL++AV L P +HE+MRYSL GGKR+
Sbjct: 67 SSQKTSKDPTFTLDFKTYMLEKASSVNKALEQAVLLKEPLKIHESMRYSLLAGGKRVRPM 126
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LCIA+CE++GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK++GE A
Sbjct: 127 LCIAACELVGGLESTAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVA 186
Query: 121 ILACQALHCLAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEV 167
+LA AL + +H+A K ++S +GSEG+ AGQ++DI+SEG EV
Sbjct: 187 VLAGDALLAFSFEHVA-KSTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDISSEGMTEV 245
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI- 226
L L FIH HKT +EAS+V G I+GG ++E++E++R F + +G+ +Q+ +DI+DV
Sbjct: 246 GLEHLEFIHVHKTAALLEASVVLGAIVGGADDEDVEKLRKFARCIGLLFQVVDDILDVTK 305
Query: 227 GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
S E+ + G+D++ DK TYPKL+GI+ S++ A++L EA+++L FD +AAPL L N
Sbjct: 306 SSQELGKTAGKDLVADKTTYPKLLGIEKSREFAEKLNREAQEQLEGFDSVKAAPLIALAN 365
Query: 287 FIVSFGN 293
+I N
Sbjct: 366 YIAYRDN 372
>gi|374639385|gb|AEZ55681.1| geranyl diphosphate synthase large subunit [Salvia miltiorrhiza]
Length = 344
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/305 (46%), Positives = 205/305 (67%), Gaps = 17/305 (5%)
Query: 6 RNDTLPKF--FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLC 62
+ D P + F Y KA +N+AL+ V + P +HE+MRYSL GGKR+ LC
Sbjct: 41 KEDKNPTWAAFDFKRYMVEKADSVNKALEAVVQMKEPLKIHESMRYSLLAGGKRVRPMLC 100
Query: 63 IASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAIL 122
IA+CE++GG +S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE A+L
Sbjct: 101 IAACELVGGEESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 160
Query: 123 ACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLS 170
A AL LA +H+A I++A + ++G+EG+ AGQ++DI SEG EV L
Sbjct: 161 AGDALLSLAFEHVAVATRGSAPERILRALGQLAKSIGAEGLVAGQVVDICSEGMAEVGLD 220
Query: 171 ELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP- 229
L FIH HKT ++ S+V G I+GG EEE+ER+R F K +G+ +Q+ +DI+DV S
Sbjct: 221 HLEFIHLHKTAALLQGSVVMGAILGGAKEEEVERLRKFAKCIGLMFQVVDDILDVTKSSH 280
Query: 230 EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
E+ + G+D++ DK TYPKL+G+ SK+ A +L EA+++L +FD +AAPL + N+I
Sbjct: 281 ELGKTAGKDLVADKTTYPKLLGVQKSKEFADDLNREAQEQLLHFDSHKAAPLIAIANYI- 339
Query: 290 SFGNN 294
++ NN
Sbjct: 340 AYRNN 344
>gi|21593158|gb|AAM65107.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 371
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 140/296 (47%), Positives = 199/296 (67%), Gaps = 18/296 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA+ +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++
Sbjct: 71 PSSFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 130
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 131 GGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 190
Query: 130 LAMQHIAIIKAKNINS-------------AVGSEGIAAGQIMDINSEG---KEVSLSELN 173
A +H+A + ++ S A+G+EG+ AGQ++DI+SEG +V L L
Sbjct: 191 FAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 250
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMR 232
FIH HKT +EAS V I+GGG+++EIER+R F + +G+ +Q+ +DI+ V S E+
Sbjct: 251 FIHLHKTAALLEASAVLRAIVGGGSDDEIERLRKFARCIGLLFQVVDDILYVTKSSKELG 310
Query: 233 EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ G+D++ DK TYPK++G++ S++ A++L EA+ +L FD + APL L N+I
Sbjct: 311 KTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYI 366
>gi|13431546|sp|Q42698.1|GGPPS_CATRO RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|1063276|emb|CAA63486.1| geranylgeranyl pyrophosphate synthase [Catharanthus roseus]
Length = 357
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 199/285 (69%), Gaps = 16/285 (5%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y KA +N+AL++AV + P +HE+MRYSL GGKR+ LCIA+CE+ GG++SVAM
Sbjct: 69 YMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAM 128
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A +HIA
Sbjct: 129 PSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIA- 187
Query: 138 IKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFI 184
K ++S +GSEG+ AGQ++D+ SEG +V L L FIH HKT +
Sbjct: 188 TATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALL 247
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDK 243
E S+V G I+GG N+E+I ++R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK
Sbjct: 248 EGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADK 307
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
TYPKL+GID S++ A++L EA+++LA FDP +AAPL L N+I
Sbjct: 308 VTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYI 352
>gi|148279681|gb|ABQ53935.1| geranylgeranyl pyrophosphate synthase [Nicotiana attenuata]
Length = 366
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/294 (47%), Positives = 198/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A KA +N+ALDEAV + P +++EAMRYSL GGKR+ LC+A+CE++GG
Sbjct: 73 FNFKTYVAEKAISVNKALDEAVIVKDPPVIYEAMRYSLLAGGKRVRPMLCLAACELVGGD 132
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
QS AM ACA+E++ TM++I DDLPC+DNDD+RRGKP+NHKV+GE A+LA +L A
Sbjct: 133 QSNAMPAACAVEMIHTMSLIHDDLPCMDNDDIRRGKPTNHKVYGEDVAVLAGDSLLAFAF 192
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ IA A + ++G+EG+ AGQ+ DI G V L L FIH HKT
Sbjct: 193 EFIATATAGVSPSRILAAIGELAKSIGTEGLVAGQVADIACTGNPNVGLDTLEFIHIHKT 252
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EAS+V G I+GGG +EE+E++R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 253 AALLEASVVLGAILGGGTDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 312
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DK TYPKL+G++ +K+ A EL +AKQ+LA FDP +AAPL L ++I + N
Sbjct: 313 VVDKTTYPKLLGLEKAKEFAAELNRDAKQQLADFDPHKAAPLVALADYIANRQN 366
>gi|148887803|gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
Length = 377
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 198/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y KAK +N+AL+ AV + P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 84 FDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGD 143
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NH FGE+ A+LA AL A
Sbjct: 144 ESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAF 203
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A I++ + +VGSEG+ AGQ++D+ SEG EV L L FIH HKT
Sbjct: 204 EHVAAATKGAPPERIVRVLGELAVSVGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKT 263
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
++ S+V G I+GGGNEEE+ ++R F +G+ +Q+ +DI+DV S E+ +K G+D+
Sbjct: 264 AALLQGSVVLGAILGGGNEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKKAGKDL 323
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DK TYPKL+G++ S + A L EA+++L +F P RAAPL L N+I N
Sbjct: 324 VADKTTYPKLIGVEKSMEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|384252734|gb|EIE26210.1| Polyprenyl synthetase [Coccomyxa subellipsoidea C-169]
Length = 289
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 202/286 (70%), Gaps = 15/286 (5%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
+A +NEALD++VPL +P I++E+MRYSL GGKR+ LC+A+CE +GG+ + AM AC
Sbjct: 4 RATLVNEALDKSVPLQYPEIINESMRYSLLAGGKRVRPCLCLAACEAVGGNIAQAMPTAC 63
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E+L TM++I DDLP +DNDD RRGKP+NHKV+GE AILA AL CLA ++I
Sbjct: 64 AMEMLHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDVAILAGDALLCLAFEYICRETRG 123
Query: 137 -----IIKAK-NINSAVGSEGIAAGQIMDINSEG--KEVSLSELNFIHRHKTGKFIEASI 188
I++ + A G+EG+ AGQI+DI SEG ++V L L +IH HKT +EAS+
Sbjct: 124 VAPERIVRVVCEVGKATGAEGLVAGQIVDIKSEGMAEQVGLETLQYIHEHKTAALLEASV 183
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYP 247
V G ++GG E ++ER+R + + +G+A+Q+ +DI+D+ S E+ KT G+D++ DK TYP
Sbjct: 184 VCGALVGGAGEPDVERLRKYARCIGLAFQVVDDILDITQSSEVLGKTAGKDLLSDKTTYP 243
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
L+GI+ SK+ A++LIA+AK++L+ +DP + APL L +I + N
Sbjct: 244 SLLGIERSKEVAQQLIADAKEQLSCYDPAKVAPLLGLATYIGARTN 289
>gi|167999215|ref|XP_001752313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696708|gb|EDQ83046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 288
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/280 (49%), Positives = 199/280 (71%), Gaps = 14/280 (5%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
KA+ +N ALD+AVP+ +P + EAMRYSL GGKR+ LCIA+CE++GG++ ++M AC
Sbjct: 4 KAQAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGNEEMSMPAAC 63
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE TA+LA AL A +HIA
Sbjct: 64 AMEMVHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDTAVLAGDALLTYAFEHIARDTTG 123
Query: 137 -----IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEASIV 189
+++ ++ AVGSEG+ AGQI+DI SEG V L L ++H HKT +E+S+V
Sbjct: 124 VPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDPTVGLETLEYVHTHKTAVLLESSVV 183
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPK 248
G I+GG +E+EI R+ + + VG+ +Q+ +DI+DV S E+ + G+D++ DKATYPK
Sbjct: 184 CGAILGGASEDEISRLSKYARNVGLLFQVVDDILDVTKSSAELGKTAGKDLLADKATYPK 243
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
L+G++ SK A+EL +AK +L+ FD +AAPL L ++I
Sbjct: 244 LLGLEKSKAFAEELTRKAKDQLSVFDQQKAAPLLGLADYI 283
>gi|168203183|gb|ACA21462.1| geranylgeranyl diphosphate synthase 6 [Picea abies]
Length = 385
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/300 (47%), Positives = 203/300 (67%), Gaps = 14/300 (4%)
Query: 3 NSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTL 61
+ +++ P F+ +Y KA INEALD+ V L HP +HEAMRYSL GGKR+ L
Sbjct: 81 SENKDEEKPIAFEFKKYMFSKANAINEALDKCVSLRHPEKIHEAMRYSLLAGGKRVRPIL 140
Query: 62 CIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAI 121
CIASCE++GGS+ M ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+
Sbjct: 141 CIASCELVGGSEESVMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAV 200
Query: 122 LACQALHCLAMQHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEG-KEVSL 169
LA AL A +HIA ++A+ + A+GSEG+ AGQ++D++S G V L
Sbjct: 201 LAGDALLAFAFEHIACSTKGVEAEKVLRVIWELGRAIGSEGLVAGQVVDLSSGGLSNVGL 260
Query: 170 SELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP 229
L +IH HKT +E S+V G IIGGG++EEIER+R F + +G+ +Q+ +DI+DV S
Sbjct: 261 DLLEYIHVHKTAALLEGSVVIGAIIGGGSDEEIERLRRFARCIGLMFQVVDDILDVTKSS 320
Query: 230 EMREKTG-RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ KT +D++ DK TYPKL+G++ S++ A+EL +A +++ FD +A PL L ++I
Sbjct: 321 QELGKTACKDLVADKLTYPKLLGLEKSREFAQELNKQAMDQISVFDVEKAKPLICLADYI 380
>gi|225458370|ref|XP_002283364.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
[Vitis vinifera]
Length = 371
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 205/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F +Y KA +++ALDEAV + P +HEAMRYSL GGKR+ LC+A+CE++GG
Sbjct: 78 FSFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSLLAGGKRVRPALCLAACELVGGD 137
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA +L A
Sbjct: 138 ESNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAF 197
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+H+A + + I +AV G+EG+ AGQ++DI+S G+ +V L +L FIH HKT
Sbjct: 198 EHLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKT 257
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EA++V G ++GGG++EE+E++R + + VG+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 258 AALLEAAVVLGALLGGGSDEEVEKLRKYARQVGLLFQVVDDILDVTKSSQELGKTAGKDL 317
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G++ S++ A+ L EAK++L+ FD +AAPL L ++I
Sbjct: 318 VTDKATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYI 366
>gi|58201026|gb|AAW66658.1| geranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 371
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/303 (46%), Positives = 201/303 (66%), Gaps = 15/303 (4%)
Query: 5 QRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCI 63
Q T P F Y KA +N+ALD+++PL P + E+MRYSL GGKR+ LCI
Sbjct: 70 QNPPTTPTF-DFKSYMLQKADSVNKALDDSIPLTEPLKIQESMRYSLLAGGKRIRPMLCI 128
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+CE++GG +S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVF E A+LA
Sbjct: 129 AACELVGGDESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKVFTEDVAVLA 188
Query: 124 CQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
A+ + +H+A I++ + VG EG+ AGQ++DI SEG EV L
Sbjct: 189 GDAMLAFSFEHVASLTKGVCSERIVRVIYELAKCVGCEGLVAGQVVDICSEGMDEVGLEH 248
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPE 230
L FIH +KT +E S+V G I+GGG++EE+E++RNF + +G+ +Q+ +DI+DV S E
Sbjct: 249 LEFIHLNKTAALLEGSVVLGAILGGGSDEEVEKLRNFARCIGLLFQVVDDILDVTKSSKE 308
Query: 231 MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ + G+D++ DK TYPKL+GI+ SK+ A+ L EAK+ LA FD +AAPL L ++I
Sbjct: 309 LGKTAGKDLVADKTTYPKLIGIEKSKEFAERLNREAKEHLAGFDQNKAAPLIALADYIAY 368
Query: 291 FGN 293
N
Sbjct: 369 RDN 371
>gi|6449052|gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
gi|10637876|emb|CAC10561.1| gpp synthase large subunit [Mentha x piperita]
gi|158979013|gb|ABW86879.1| geranyl pyrophosphate synthase large subunit [Mentha x piperita]
Length = 377
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 197/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y KAK +N+AL+ AV + P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 84 FDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGD 143
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NH FGE+ A+LA AL A
Sbjct: 144 ESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAF 203
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A I++ + ++GSEG+ AGQ++D+ SEG EV L L FIH HKT
Sbjct: 204 EHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKT 263
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
++ S+V G I+GGG EEE+ ++R F +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 264 AALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKDL 323
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DK TYPKL+G++ SK+ A L EA+++L +F P RAAPL L N+I N
Sbjct: 324 VADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 377
>gi|56122556|gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 310
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 200/289 (69%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K K +N+ALD AV + P +HEAMRYSL GGKR+ LCIA+CE++GG+
Sbjct: 17 FDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRPILCIAACELVGGN 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHKV+GE A+LA AL A
Sbjct: 77 ESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+++A +I+A + +GSEG+ AGQ++DI S G + L L FIH HKT
Sbjct: 137 EYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDM 239
+EAS+V G I+GGG +E++ER+R F + +G+ +Q+ +DI+DV + S E+ + G+D+
Sbjct: 197 AALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G++ +++ A++L EA ++L FDP +AAPL L FI
Sbjct: 257 VADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAEFI 305
>gi|289526777|pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526780|pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
gi|289526781|pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526784|pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
gi|289526785|pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526788|pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
gi|289526789|pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526792|pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
gi|289526793|pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|289526796|pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
gi|310942863|pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942866|pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942867|pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
gi|310942870|pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 197/295 (66%), Gaps = 14/295 (4%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F + Y KAK +N+AL+ AV + P +HE+MRYSL GGKR+ LCIA+CE++GG
Sbjct: 1 MFDFDGYMLRKAKSVNKALEAAVQMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGG 60
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NH FGE+ A+LA AL A
Sbjct: 61 DESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFA 120
Query: 132 MQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
+H+A I++ + ++GSEG+ AGQ++D+ SEG EV L L FIH HK
Sbjct: 121 FEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHK 180
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRD 238
T ++ S+V G I+GGG EEE+ ++R F +G+ +Q+ +DI+DV S E+ + G+D
Sbjct: 181 TAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGKTAGKD 240
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DK TYPKL+G++ SK+ A L EA+++L +F P RAAPL L N+I N
Sbjct: 241 LVADKTTYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN 295
>gi|297802274|ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
gi|297314857|gb|EFH45280.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 276 bits (706), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/296 (48%), Positives = 201/296 (67%), Gaps = 18/296 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA+ +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++
Sbjct: 79 PSSFDFMSYIITKAESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELV 138
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 139 GGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLS 198
Query: 130 LAMQHIAIIKAKNINS-------------AVGSEGIAAGQIMDINSEG---KEVSLSELN 173
A +H+A + ++ S A+G+EG+ AGQ++DI+SEG +V L L
Sbjct: 199 FAFEHLASATSSDVVSPVRVVRAIGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLE 258
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMR 232
FIH HKT +EAS V G I+GGG+++EIER+R F + +G+ +Q+ +DI+DV S E+
Sbjct: 259 FIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELG 318
Query: 233 EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ G+D++ DK TYPK++G++ S++ A +L EA+ +L FD +AAPL L N+I
Sbjct: 319 KTAGKDLIADKLTYPKIMGLEKSREFADKLNREARDQLLGFDSAKAAPLLALANYI 374
>gi|20386366|gb|AAM21638.1|AF492022_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 364
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 140/293 (47%), Positives = 202/293 (68%), Gaps = 15/293 (5%)
Query: 11 PKF-FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEM 68
PK+ F + Y KA +N+AL+ AV L P +HEAMRYS L GGKR+ LCIA+CE+
Sbjct: 67 PKWAFDLKSYMIQKANSVNQALETAVSLREPLKIHEAMRYSVLAGGKRVRPVLCIAACEL 126
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+GG +S+AM ACA+E++ TM++I DD PC+DNDDLRRGKP+NHKVFGE A+LA AL
Sbjct: 127 VGGEESMAMPAACAVEMIHTMSLIHDDPPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALL 186
Query: 129 CLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIH 176
+ +H+ I++A + ++GSEG+ AGQ++DI SEG +V L L FIH
Sbjct: 187 AFSFEHMTGSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDICSEGLTDVGLEHLEFIH 246
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
HKT +E S+V G I+GGG++EE+E++R F + +G+ +Q+ +DI+DV S E+ +
Sbjct: 247 VHKTAALLEGSVVLGAILGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSTELGKTA 306
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D++ DK TYPKL+GI+ S++ A+EL +A ++L FD +AAPL L N+I
Sbjct: 307 GKDLVADKVTYPKLMGIEKSREFAEELKNDAVEQLRGFDQEKAAPLIALANYI 359
>gi|116831085|gb|ABK28497.1| unknown [Arabidopsis thaliana]
Length = 348
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 198/295 (67%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGS 72
F Y KA +NEALD AV L P +HEA+RYSL GKR+ LCIA+CE++GG
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+SVA+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 133 QHIA---------IIKA-KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHK 179
+H+A +++A + A+GS+G+ AGQ++D+ S G +V L L FIH HK
Sbjct: 173 EHLATSTAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHK 232
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA+ V G I+GGG++EE+E++R F + +G+ +Q+ +DI+DV S E KT G+D
Sbjct: 233 TAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 292
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DK TYPKL+G++ SK A +L+++A ++L FD +R PL L N+I N
Sbjct: 293 LIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|15224197|ref|NP_179452.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
gi|75268021|sp|Q9ZU77.1|GGPP7_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 7,
chloroplastic; Short=GGPP synthase 7; Short=GGPS7;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 7;
AltName: Full=Dimethylallyltranstransferase 7; AltName:
Full=Farnesyl diphosphate synthase 7; AltName:
Full=Farnesyltranstransferase 7; AltName:
Full=Geranyltranstransferase 7; Flags: Precursor
gi|4217998|gb|AAD12206.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806194|gb|ABE65825.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251692|gb|AEC06786.1| geranylgeranyl diphosphate synthase 7 [Arabidopsis thaliana]
Length = 347
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/295 (47%), Positives = 198/295 (67%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGS 72
F Y KA +NEALD AV L P +HEA+RYSL GKR+ LCIA+CE++GG
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGE 112
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+SVA+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A
Sbjct: 113 ESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAF 172
Query: 133 QHIA---------IIKA-KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHK 179
+H+A +++A + A+GS+G+ AGQ++D+ S G +V L L FIH HK
Sbjct: 173 EHLATSTAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHK 232
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA+ V G I+GGG++EE+E++R F + +G+ +Q+ +DI+DV S E KT G+D
Sbjct: 233 TAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 292
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ DK TYPKL+G++ SK A +L+++A ++L FD +R PL L N+I N
Sbjct: 293 LIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
>gi|158104429|gb|ABD92926.2| geranylgeranyl diphosphate synthase [Stevia rebaudiana]
Length = 361
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/287 (47%), Positives = 199/287 (69%), Gaps = 13/287 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K +NEALD +VPL P +HE+MRYSL GGKR+ +CIA+CE++GG+
Sbjct: 69 FNFDSYMLEKVNMVNEALDASVPLKDPIKIHESMRYSLLAGGKRIRPMMCIAACEIVGGN 128
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM ACA+E++ TM+++ DDLPC+DNDD RRGKP +HKV+GE A+L AL L+
Sbjct: 129 ILNAMPAACAVEMIHTMSLVHDDLPCMDNDDFRRGKPISHKVYGEEMAVLTGDALLSLSF 188
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+HIA I++A + +VGSEG+ AGQ++DI SEG +V L L +IH HKT
Sbjct: 189 EHIATATKGVSKDRIVRAIGELARSVGSEGLVAGQVVDILSEGADVGLDHLEYIHIHKTA 248
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+E+S+V G I+GGG++++IE++R F + +G+ +Q+ +DI+DV S E KT G+D++
Sbjct: 249 MLLESSVVIGAIMGGGSDQQIEKLRKFARSIGLLFQVVDDILDVTKSTEELGKTAGKDLL 308
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
DK TYPKL+GI+ S++ A++L EA+++L+ FD +AAPL L N+
Sbjct: 309 TDKTTYPKLLGIEKSREFAEKLNKEAQEQLSGFDRRKAAPLIALANY 355
>gi|159490409|ref|XP_001703169.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
gi|158270709|gb|EDO96545.1| geranylgeranyl diphosphate synthase [Chlamydomonas reinhardtii]
Length = 345
Score = 273 bits (698), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 193/288 (67%), Gaps = 13/288 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y +AK +N+A+DEAVPL +P L+E+MRYSL GGKR+ LC+A+CE++GG
Sbjct: 53 FDFNTYMVDRAKLVNKAMDEAVPLKYPETLNESMRYSLLAGGKRVRPALCLAACELVGGD 112
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E++ TM++I DDLP +DNDD RRG+P+NHKV+GE AILA AL +
Sbjct: 113 IHAALPAACAMEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLSFSF 172
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+HIA +++ + AVG +G+ AGQ++DI SE KEV L L +IH HKT
Sbjct: 173 EHIARATKGVPAERVLRVIMELGKAVGQDGLVAGQVVDIQSEDKEVGLDVLKYIHEHKTA 232
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+EAS+V G I+GG +E IE++R + +G+A+Q+ +DI+DV + E KT +D+
Sbjct: 233 ALLEASVVCGAILGGADESTIEKLRKYSLNIGLAFQVIDDILDVTATTEQLGKTAAKDLA 292
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+K TYPKL+G++ SK+ A +LI EA Q+L FD +AAPL L FI
Sbjct: 293 VNKTTYPKLLGLEKSKQVADDLIKEAIQQLDGFDAAKAAPLVALAKFI 340
>gi|194272413|gb|ACF37217.1| geranylgeranyl diphosphate synthase [Ipomoea batatas]
Length = 363
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 136/281 (48%), Positives = 195/281 (69%), Gaps = 16/281 (5%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
KA+ +N+AL+ AV L P +HE+MRYSL GGKR+ LCIA+CEM+GG ++ AM AC
Sbjct: 79 KAESVNKALEAAVLLKEPLRVHESMRYSLLAGGKRIRPMLCIAACEMVGGDEATAMPAAC 138
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
A+E++ TM+++ DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A +HIA K
Sbjct: 139 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAVLAGDALLSFAFEHIA-TATK 197
Query: 142 NINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASI 188
++S +G+EG+ AGQ++DI SEG +V L L FIH HKT +EAS+
Sbjct: 198 GVSSEKIVRVIGELAKCIGAEGLVAGQVVDICSEGISDVGLEHLEFIHLHKTAALLEASV 257
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYP 247
V G ++GGG EEE+ ++R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK TYP
Sbjct: 258 VLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSHELGKTAGKDLVADKVTYP 317
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KL+G+ S++ A++L EA+ +L+ FD +AAPL L N+I
Sbjct: 318 KLLGLQKSREFAEQLNKEAQAQLSGFDQGKAAPLIALANYI 358
>gi|426322797|gb|AFY26193.1| geranylgeranyl diphosphate synthase [Picrorhiza kurrooa]
Length = 354
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/302 (44%), Positives = 201/302 (66%), Gaps = 14/302 (4%)
Query: 1 IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMS 59
I+ +N F Y KA +N+ALD+++PL P +HE+MRYSL GGKR+
Sbjct: 48 ILTKDQNFETSPTFDFKSYMLEKANSVNKALDDSIPLTEPLKIHESMRYSLLAGGKRIRP 107
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
LCIA+CE++GG +S AM ACA+E++ TM+++ DDLPC+DNDDLRRGKP+NHK+F E
Sbjct: 108 LLCIAACELVGGEESTAMPAACAVEMVHTMSLMHDDLPCMDNDDLRRGKPTNHKIFSEDV 167
Query: 120 AILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEV 167
A+LA A+ L+ +H+A II+ + +G EG+ AGQ++DI+SEG +V
Sbjct: 168 AVLAGDAMLALSFEHVATSTKGVPSERIIRVIYELAKCIGCEGLVAGQVVDISSEGMTQV 227
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI- 226
L L FIH +KT +E S+V G ++GGG++EE+E++R F + +G+ +Q+ +DI+DV
Sbjct: 228 GLEHLEFIHSNKTAALLEGSVVLGALLGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTK 287
Query: 227 GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
S E+ + G+D++ DK TYPKL+GI+ S++ A+ L EA+ +L F +AAPL L N
Sbjct: 288 SSKELGKTAGKDLVADKTTYPKLIGIEKSREFAERLNREAQDQLLGFHHNKAAPLIALAN 347
Query: 287 FI 288
+I
Sbjct: 348 YI 349
>gi|20386368|gb|AAM21639.1|AF492023_1 geranylgeranyl pyrophosphate synthase [Cistus creticus]
Length = 369
Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/289 (47%), Positives = 195/289 (67%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A +N+AL+ AV L P +HEAMRYSL GGKR+ LCIA+CE++GG
Sbjct: 76 FDFQSYMDQMADSVNQALESAVSLREPLKIHEAMRYSLLAGGKRVRPLLCIAACELVGGD 135
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
SVAM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK FGE A+LA AL A
Sbjct: 136 VSVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKAFGEDIAVLAGDALLSFAF 195
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A I++A + AVG EG+ AGQ++DI SEG +V L L +IH HKT
Sbjct: 196 EHVAVSTVGASPDKIVRAVGELAKAVGKEGLVAGQVVDITSEGLNDVGLDHLEYIHVHKT 255
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EA++V G I+GGG +EE+ER+R F +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 256 AVLLEAAVVLGAILGGGTDEEVERLRKFAICIGLLFQVVDDILDVTKSSVELGKTAGKDL 315
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+G++ S++ A++L +A ++L FD +AAPL L ++I
Sbjct: 316 VADKVTYPKLMGLEKSREFAEKLRDDAVEQLRVFDQVKAAPLIALAHYI 364
>gi|121145|sp|P80042.1|GGPPS_CAPAN RecName: Full=Geranylgeranyl pyrophosphate synthase, chloroplastic;
Short=GGPP synthase; Short=GGPS; AltName:
Full=(2E,6E)-farnesyl diphosphate synthase; AltName:
Full=Dimethylallyltranstransferase; AltName:
Full=Farnesyl diphosphate synthase; AltName:
Full=Farnesyltranstransferase; AltName:
Full=Geranyltranstransferase; Flags: Precursor
gi|643094|emb|CAA56554.1| geranylgeranyl diphosphate synthase [Capsicum annuum]
Length = 369
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/289 (47%), Positives = 195/289 (67%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALDEA+ + P ++HEAMRYSL GGKR+ LC+A+CE++GG+
Sbjct: 76 FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGN 135
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q AM+ ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK++GE A+LA +L A
Sbjct: 136 QENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAF 195
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+HI I+ A + ++G+EG+ AGQ+ DI G VSL L FIH HKT
Sbjct: 196 EHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKT 255
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E+S+V G I+GGG E+E++R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 256 AALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 315
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+G++ +K+ A EL EAKQ+L FD +AAPL L ++I
Sbjct: 316 VVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYI 364
>gi|302843854|ref|XP_002953468.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
gi|300261227|gb|EFJ45441.1| hypothetical protein VOLCADRAFT_109214 [Volvox carteri f.
nagariensis]
Length = 312
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/288 (47%), Positives = 195/288 (67%), Gaps = 13/288 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N+Y +AK +N+ALDEAVP +P L+E+MRYSL GGKR+ LC+A+CE+IGG
Sbjct: 20 FDFNQYMVDRAKLVNKALDEAVPQKYPDTLYESMRYSLLAGGKRVRPALCLAACELIGGD 79
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E++ TM++I DDLP +DNDD RRG+P+NHKV+GE AIL+ AL A
Sbjct: 80 VQAALPAACAMEMIHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILSGDALLTYAF 139
Query: 133 QHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+HIA + A+ + A G+EG+ AGQ++DI SE KEV L L +IH HKT
Sbjct: 140 EHIARATKGVSAERVLRVIMELGRATGAEGLVAGQVVDIQSEDKEVGLDVLKYIHLHKTA 199
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+EAS+V G I+GG +E IE++R + + +G+A+Q+ +DI+DV + E KT +D+
Sbjct: 200 ALLEASVVCGAIVGGADEATIEKLRKYSRNIGLAFQVVDDILDVTQTTEQLGKTAAKDLA 259
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+K TYPKL+G++ S++ A++LI EA Q+L FD +AAPL L +I
Sbjct: 260 VNKTTYPKLLGLEKSREVAEQLINEAIQQLDGFDKVKAAPLVALAKYI 307
>gi|297836608|ref|XP_002886186.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
gi|297332026|gb|EFH62445.1| hypothetical protein ARALYDRAFT_480767 [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/294 (46%), Positives = 198/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y KA+ IN ALDEA+PL P +H+AMRY+ L GGKR+ LC+A+CE++GG
Sbjct: 79 FDFKPYMINKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + K + ++G++G+ AGQ MD++SEG +V L +L +IH HKT
Sbjct: 199 EHLTEADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDVGLEDLEYIHVHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS V G +IGGG+EEEIE++R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 259 GALLEASAVIGAVIGGGSEEEIEKVRYFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYPK++G++ SK+ K+L EAK+ + FD + PL L NFI + N
Sbjct: 319 VAGKLTYPKVMGLEKSKEFVKKLKREAKEHIQGFDSDKVKPLIALTNFIANRNN 372
>gi|262036860|dbj|BAI47571.1| geranylgeranyl pyrophosphate synthase [Ipomoea sp. Kenyan]
Length = 373
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 193/280 (68%), Gaps = 14/280 (5%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
KAK +N+AL+ AV + P +HE+MRYSL GGKR+ LCIA+CE++GG + AM AC
Sbjct: 89 KAKSVNKALEGAVLVKEPLRIHESMRYSLLAGGKRIRPMLCIAACELVGGDEETAMPAAC 148
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E++ TM+++ DDLPC+DNDDLRRGKP+NHKV+GE A+LA AL A +HIA
Sbjct: 149 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHIATATKG 208
Query: 137 -----IIK-AKNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIV 189
I++ + ++G+EG+ AGQ++DI SEG V L L FIH HKT +E S+V
Sbjct: 209 ASSEKIVRVVGELAKSIGAEGLVAGQVVDICSEGISNVGLEHLEFIHLHKTAALLEGSVV 268
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPK 248
G I+GGG EEEI ++R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK TYPK
Sbjct: 269 LGAILGGGTEEEIAKLRKFARNIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKVTYPK 328
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
L+GI S++ A++L EA+ +L+ FD +AAPL L N+I
Sbjct: 329 LLGIQKSREFAEQLNNEAQAQLSGFDQEKAAPLIALANYI 368
>gi|15224199|ref|NP_179454.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
gi|75266042|sp|Q9SLG2.1|GGPP4_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 4; Short=GGPP
synthase 4; Short=GGPS4; AltName: Full=(2E,6E)-farnesyl
diphosphate synthase 4; AltName:
Full=Dimethylallyltranstransferase 4; AltName:
Full=Farnesyl diphosphate synthase 4; AltName:
Full=Farnesyltranstransferase 4; AltName:
Full=Geranyltranstransferase 4; Flags: Precursor
gi|4185130|gb|AAD08933.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|20197573|gb|AAM15136.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|91806196|gb|ABE65826.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|330251694|gb|AEC06788.1| geranylgeranyl pyrophosphate synthase 3 [Arabidopsis thaliana]
Length = 372
Score = 269 bits (688), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 198/289 (68%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y KA+ IN ALDEA+PL P +H+AMRY+ L GGKR+ LC+A+CE++GG
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 133 QHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKT 180
+H+ +++A K + ++G++G+ AGQ D++SEG E V L +L +IH HKT
Sbjct: 199 EHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS V G +IGGG E+EIE++RNF + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 259 GSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDK 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPK++G++ SK+ ++L +A++ L FD + PL L NFI
Sbjct: 319 VAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFI 367
>gi|116831087|gb|ABK28498.1| unknown [Arabidopsis thaliana]
Length = 373
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 198/289 (68%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y KA+ IN ALDEA+PL P +H+AMRY+ L GGKR+ LC+A+CE++GG
Sbjct: 79 FDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGE 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA
Sbjct: 139 ERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 198
Query: 133 QHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKT 180
+H+ +++A K + ++G++G+ AGQ D++SEG E V L +L +IH HKT
Sbjct: 199 EHLTEADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS V G +IGGG E+EIE++RNF + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 259 GSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDK 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPK++G++ SK+ ++L +A++ L FD + PL L NFI
Sbjct: 319 VAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFI 367
>gi|297830700|ref|XP_002883232.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
gi|297329072|gb|EFH59491.1| hypothetical protein ARALYDRAFT_898426 [Arabidopsis lyrata subsp.
lyrata]
Length = 356
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 201/294 (68%), Gaps = 19/294 (6%)
Query: 19 YKALKAKQINEALDEAVPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA 76
Y K+K +NE LDEAVPL P + + EAMRY+L GGKR+ LC+A+CE++GG +S A
Sbjct: 63 YMIRKSKSVNEVLDEAVPLCEPVLKIREAMRYTLLSGGKRVRPMLCLAACELVGGQESTA 122
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI- 135
M ACA+E++ ++IQDDLPC+D+D+LRRGKP+NHKVFGE AILA AL LA++H
Sbjct: 123 MPCACAVEMIHASSLIQDDLPCMDDDNLRRGKPTNHKVFGENIAILAVDALIALAIKHTV 182
Query: 136 -----------AIIKAKNINSAVGSEGIAAGQIMDINSEGK----EVSLSELNFIHRHKT 180
++ + AVG+EG+ AGQ D++ EGK + L L FIH HKT
Sbjct: 183 ESTSLDVPPERVLLAILEMARAVGTEGLVAGQAADLDGEGKSFDNDTGLKHLEFIHIHKT 242
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EA+ V G I+GGG++EEIER+R++ + +G+ +Q+ +D++DV S E KT G+D+
Sbjct: 243 AALLEAAAVMGAIMGGGSDEEIERIRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDL 302
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ +K TYPK++G++ S+++A++L EA++ L FDP +AAPL L ++IV+ N
Sbjct: 303 ISEKLTYPKVMGVEKSREYAEKLNREAREHLNMFDPDKAAPLLLLADYIVNRQN 356
>gi|56122554|gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
palaestina]
Length = 364
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 198/289 (68%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K K +N+ALD A+ + P +HEAMRYSL GGKR+ LCIA+ E++GG+
Sbjct: 71 FDFKAYLLEKGKSVNQALDNAILIREPEKIHEAMRYSLLAGGKRVRPILCIAASELVGGN 130
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S+AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA AL A
Sbjct: 131 ESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLAFAF 190
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+++A +++A + +GSEG+ AGQ++DI S G + L L FIH HKT
Sbjct: 191 EYVANATVGVSPSRVVRAIGELAKDIGSEGLVAGQVVDILSAGMSNIGLDHLEFIHLHKT 250
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDM 239
+EAS+V G I+GGG +E++ER+R F + +G+ +Q+ +DI+DV + S E+ + G+D+
Sbjct: 251 AALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTMSSEELGKTAGKDL 310
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G++ +++ A++L EA ++L FDP AAPL L +I
Sbjct: 311 VADKATYPKLLGLEKAREFAEKLKNEAIEQLDEFDPEEAAPLLALAEYI 359
>gi|297825291|ref|XP_002880528.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297326367|gb|EFH56787.1| geranylgeranyl pyrophosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/289 (46%), Positives = 190/289 (65%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F+ + Y KA+ +N+ALDEA+P+ P +HEAMRY+ L GKR+ LC+ASCE++GG
Sbjct: 79 FEFDPYMISKAESVNKALDEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKV+GE AIL+ AL LA
Sbjct: 139 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 198
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + + + ++G+ G+ AGQ MDI+SEG EV L L FIH HKT
Sbjct: 199 EHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E + V G IIGGG++EEIE +R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 259 AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPKL+G++ SK+ K L +A+Q L F + APL L FI
Sbjct: 319 LTGKLTYPKLMGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFI 367
>gi|1944371|dbj|BAA19583.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 373
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 190/289 (65%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F+ + Y KA+ +N+AL+EA+P+ P +HEAMRY+ L GKR+ LC+ASCE++GG
Sbjct: 80 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 139
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKV+GE AIL+ AL LA
Sbjct: 140 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 199
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + + + ++G+ G+ AGQ MDI+SEG EV L L FIH HKT
Sbjct: 200 EHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKT 259
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E + V G IIGGG++EEIE +R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 260 AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 319
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPKL+G++ SK+ K L +A+Q L F + APL L FI
Sbjct: 320 LAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFI 368
>gi|15224064|ref|NP_179960.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
gi|75218930|sp|O04046.2|GGPP2_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
large subunit 2; Short=GGPP synthase 2; Short=GGPS2;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 2;
AltName: Full=Dimethylallyltranstransferase 2; AltName:
Full=Farnesyl diphosphate synthase 2; AltName:
Full=Farnesyltranstransferase 2; AltName:
Full=Geranyltranstransferase 2; Flags: Precursor
gi|3152604|gb|AAC17083.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|21593114|gb|AAM65063.1| pregeranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|26450970|dbj|BAC42592.1| putative pregeranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|28950937|gb|AAO63392.1| At2g23800 [Arabidopsis thaliana]
gi|206748358|gb|ACI22362.1| geranylgeranyl pyrophosphate synthase 2 [Arabidopsis thaliana]
gi|330252398|gb|AEC07492.1| geranylgeranyl pyrophosphate synthase 4 [Arabidopsis thaliana]
Length = 376
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/289 (46%), Positives = 190/289 (65%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F+ + Y KA+ +N+AL+EA+P+ P +HEAMRY+ L GKR+ LC+ASCE++GG
Sbjct: 83 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 142
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ HKV+GE AIL+ AL LA
Sbjct: 143 ENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAF 202
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + + + ++G+ G+ AGQ MDI+SEG EV L L FIH HKT
Sbjct: 203 EHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKT 262
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E + V G IIGGG++EEIE +R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 263 AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 322
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPKL+G++ SK+ K L +A+Q L F + APL L FI
Sbjct: 323 LAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFI 371
>gi|442743257|gb|AFC88470.2| geranylgeranyl pyrophosphate synthase 4 [Nicotiana tabacum]
Length = 372
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 189/290 (65%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K K +N ALD AVPL P HEAMRYSL GKR+ LCIA+CE++GG
Sbjct: 79 FDFKSYMHQKIKSVNRALDAAVPLREPLKFHEAMRYSLLSEGKRVCPVLCIAACELVGGQ 138
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM AC +E++ M ++ DDLPC+DND LRRGK SNHKVFGE +LA +L LA
Sbjct: 139 ESTAMPAACGMEMVHAMCMMHDDLPCMDNDTLRRGKLSNHKVFGENVTVLAGYSLVALAF 198
Query: 133 QHIAI----IKAKNINSAVGS-------EGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+H+A + K + A+G EG AAGQ++D+ S GK + L EL +IHRHKT
Sbjct: 199 EHMATATQGVHPKTMVRAIGELARLIGPEGAAAGQVLDLLSGGKSDTGLEELEYIHRHKT 258
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
F EA+ + G ++GG EEI R+R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 259 ADFAEAAAIIGAMVGGATNEEINRLRKFSQCIGLLFQVVDDILDVTKSSEQLGKTAGKDL 318
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ +K TYPK++GI+ SK++A+ L EAK++L FDP +AAPL + +F++
Sbjct: 319 LANKLTYPKMIGIEKSKEYAQNLSKEAKEQLVGFDPEKAAPLLAMADFVL 368
>gi|4958918|dbj|BAA78046.1| GGPP synthase [Daucus carota]
Length = 366
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 197/298 (66%), Gaps = 15/298 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA +N+ALD +V L P +HE+MRYSL GGKR+ L IA+CE+
Sbjct: 69 PSTFDFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPLLSIAACELF 128
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG ++VAM ACA+E++ TM+++ DDLP +DNDDLRRGKP+NHKV+GE+ A+LA A+
Sbjct: 129 GGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLA 188
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIH 176
LA H+ + + ++S A+G+EG+ AGQI+D+ SEG + L +L FIH
Sbjct: 189 LAAFHLVATETRGVSSDQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLEDLEFIH 248
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
R KT +E S+V G I+GG N+EE+E++R + + +G+ +Q+ +DI+DV S E+ +
Sbjct: 249 RSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 308
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ DK TYPKL+GI+ S++ + EL EA +LA F+ + APL + N+I + N
Sbjct: 309 GKDLVADKTTYPKLIGIEKSREFSDELKREAIDQLAGFNSDKTAPLIAMANYIANRDN 366
>gi|3885426|gb|AAC77874.1| geranylgeranyl pyrophosphate synthase [Helianthus annuus]
Length = 356
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/275 (45%), Positives = 192/275 (69%), Gaps = 14/275 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y K +++ALDE++ + +P +HEAMRYSL GGKR+ LCIA+CE++GG
Sbjct: 62 FNFNAYMLGKGNSVHKALDESIMIKNPPTIHEAMRYSLLAGGKRVRPILCIAACELVGGE 121
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AM ACA+E++ TM++I DDLPC+DNDD RRGKP+NHKV+GE A+LA +L A
Sbjct: 122 EATAMPAACAVEMIHTMSLIHDDLPCMDNDDFRRGKPTNHKVYGEDVAVLAGDSLLAFAF 181
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSE-GKEVSLSELNFIHRHKT 180
++++ + + ++G+EG+ AGQ++DI S G+++ L +L FIH HKT
Sbjct: 182 EYVSSRTEGASPARVLAAIGELAKSIGTEGLVAGQVVDIASTGGQDIGLDQLEFIHIHKT 241
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EAS+V G I+GGG++ ++E++R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 242 AALLEASVVLGAILGGGSDAQVEKLRTFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 301
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
+ DK TYPKL+G+D S++ A+EL+AEAKQ+L F+
Sbjct: 302 LVDKTTYPKLLGLDKSRQFAEELLAEAKQQLEEFE 336
>gi|325516284|gb|ADZ24720.1| geranylgeranyl pyrophosphate synthase 3 [Solanum pennellii]
Length = 360
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/303 (46%), Positives = 203/303 (66%), Gaps = 16/303 (5%)
Query: 1 IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMS 59
+ Q + + + + EY KA +N+AL+ AV + P ++HE+MRYSL GGKR+
Sbjct: 54 LTKEQESKSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVMIHESMRYSLLAGGKRIRP 113
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
LCIA+CE++GG +S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK++GE
Sbjct: 114 MLCIAACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDV 173
Query: 120 AILACQALHCLAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KE 166
A+LA AL LA +HIA K ++S +G+EG+ AGQ++DI SEG +
Sbjct: 174 AVLAGDALLALAFEHIA-THTKGVSSDRIVRVIGELAKCIGAEGLVAGQVVDIISEGISD 232
Query: 167 VSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI 226
V L L FIH HKT +E S+V G I+GG +E++E++R F + +G+ +Q+ +DI+DV
Sbjct: 233 VDLKHLEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVT 292
Query: 227 GSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLV 285
S + KT G+D++ DK TYPKL+GI+ S++ A+EL EAK +L FD +AAPL L
Sbjct: 293 KSSQQLGKTAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALA 352
Query: 286 NFI 288
N+I
Sbjct: 353 NYI 355
>gi|376372994|gb|AFB35651.1| chloroplast geranylgeranyl diphosphate synthase 3 [Nicotiana
tabacum]
Length = 363
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 141/290 (48%), Positives = 197/290 (67%), Gaps = 16/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ NEY KA +N+AL+ +V + P +HE+MRYSL GGKR+ LCIASCE++GG
Sbjct: 70 MEFNEYVLEKANSVNKALESSVLIKDPVKIHESMRYSLLAGGKRIRPMLCIASCELVGGD 129
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHK++GE A+LA AL LA
Sbjct: 130 ESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDALLALAF 189
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
+HIA + K + S +G+E + AGQ++DI SEG +V L L FIH HK
Sbjct: 190 EHIA-TQTKGVPSHRIVRVIGELAKCIGAERLVAGQVVDIISEGISDVDLKHLEFIHLHK 248
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +E S+V G I+GG + EE+E++R F + +G+ +Q+ +DI+DV S + KT G+D
Sbjct: 249 TAALLEGSVVLGAILGGADAEEVEKLRKFARCIGLLFQVVDDILDVTKSSQQLGKTAGKD 308
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ DK TYPKL+GID S+ A+EL EA+ +LA FD +AAPL L N+I
Sbjct: 309 LVADKVTYPKLIGIDKSRDFAEELNKEAQAQLAGFDQEKAAPLIALANYI 358
>gi|41059107|gb|AAR99082.1| geranylgeranyl pyrophosphate synthase [Plectranthus barbatus]
Length = 359
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 140/295 (47%), Positives = 201/295 (68%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+++N ALD AV P +HE+MRYSL GGKR+ LCIASCE++GG
Sbjct: 66 FDFEAYMKEKAERVNRALDAAVAQREPRWIHESMRYSLLAGGKRVRPLLCIASCELVGGD 125
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM ACA E++ TM++I DDLPC+DNDDLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 126 ERTAMPAACATEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGENVAVLAGDALLALAF 185
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+H+A +++A +GSEG+ GQ++DI+SEG EV + +L +IH HKT
Sbjct: 186 EHVAAATEGVAPERVVRAVVEFGRYIGSEGLVGGQVVDIHSEGLAEVGVEQLEYIHLHKT 245
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EA++V G I+GG ++E +E++R F + +G+ +Q+ +DI+DV S E KT G+D+
Sbjct: 246 AALLEAAVVMGAILGGADDEAVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 305
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
+ DK TYPKL+G++ S++ A++L A+A +L FDP RAAPL L N+I ++ NN
Sbjct: 306 LTDKTTYPKLLGLEKSREFAEKLRADACDQLVGFDPARAAPLIALANYI-AYRNN 359
>gi|79154586|gb|ABB52065.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
subsp. sativus]
Length = 365
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 197/298 (66%), Gaps = 16/298 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y KA +N+ALD +V L P +HE+MRYSL GGKR+ L IA+CE+
Sbjct: 69 PPTFDFKSYMLEKAISVNKALDASVSLQEPVKIHESMRYSLLAGGKRVRPILSIAACELF 128
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG ++VAM ACA+E++ TM+++ DDLP +DNDDLRRGKP+NHKV+GE+ A+LA A+
Sbjct: 129 GGHEAVAMPSACAVEMIHTMSLMHDDLPFMDNDDLRRGKPTNHKVYGESVAVLAGDAMLA 188
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIH 176
LA H+ + ++S A+G+EG+ AGQI+D+ SEG + L +L FIH
Sbjct: 189 LAF-HLVATETSGVSSSQVVRVIVELAKAIGAEGLVAGQIVDVCSEGDPNLGLKDLEFIH 247
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKT 235
R KT +E S+V G I+GG N+EE+E++R + + +G+ +Q+ +DI+DV S E+ +
Sbjct: 248 RSKTAALLEGSVVMGAILGGANDEEVEKVRKYARCIGLLFQVVDDILDVTKSSKELGKTA 307
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ DK TYPKL+GI+ S++ + EL EA +LA F+ +AAPL + N+I + N
Sbjct: 308 GKDLVADKTTYPKLIGIEKSREFSDELKREAVDQLAGFNSDKAAPLIAMANYIANRDN 365
>gi|88910043|gb|ABD57975.1| geranyl diphosphate synthase [Arnebia euchroma]
Length = 338
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/295 (46%), Positives = 197/295 (66%), Gaps = 15/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K INEALD AVPL P LHEAMRY+L GGKR+ +CIA+CE++GG
Sbjct: 44 FDFKSYMINKITSINEALDSAVPLIEPIKLHEAMRYTLLSGGKRVRPIVCIAACELVGGH 103
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S M ACA E++ +M+V+ DDLPC+DNDD RRGK SNH+V+GE +LA ++L LA+
Sbjct: 104 ESTVMPTACAQEMIHSMSVMLDDLPCMDNDDFRRGKLSNHRVYGEKITLLAVRSLQALAV 163
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKE--VSLSELNFIHRHK 179
H+ +++A + GS+G AAGQI D+ S G++ VS+ +L IH K
Sbjct: 164 DHVVTATRGVPPERLVRALTEMAILTGSKGAAAGQIADLCSSGEDFNVSIEQLEHIHMQK 223
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRD 238
TG E S+VSG IIGG +EEEIE++R F K +G+ +Q+ +D++DV S E+ + G+D
Sbjct: 224 TGTLCEGSVVSGAIIGGASEEEIEKLRKFSKCIGLMFQIVDDVLDVTKSSMELGKPAGKD 283
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
++ KATYP+L+GI+ S++ A +L +EAK++L+ FD +AAPL L ++IV+ N
Sbjct: 284 VVAAKATYPRLIGIEKSRELALKLNSEAKEQLSGFDQEKAAPLIALADYIVARQN 338
>gi|14422402|dbj|BAB60820.1| putative GGPP synthase [Eucommia ulmoides]
Length = 288
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/286 (46%), Positives = 195/286 (68%), Gaps = 15/286 (5%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
KA +N+AL+ V L +P +HE+MRYS L GGKR+ LCIA+CE++GG +S AM AC
Sbjct: 4 KADSVNKALEATVLLRYPIKIHESMRYSILAGGKRVRPLLCIAACELVGGQESTAMPAAC 63
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E++ TM+++ DDLPC+DNDDLRRGKP+NH VFGE A+LA +L A + IA
Sbjct: 64 AVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMVFGEDVAVLAGDSLLAFAFELIATSTTG 123
Query: 137 -----IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIV 189
I++ + ++GSEG+ AGQ++DI SEG +V L L FIH HKT +E S+V
Sbjct: 124 VPADRIVRVIGELAKSIGSEGLVAGQVIDICSEGMTDVGLEHLEFIHVHKTAALLEGSVV 183
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPK 248
G I+GG + E+E++R F + +G +Q+ +DI+DV S E+ + G+D++ DK TYPK
Sbjct: 184 LGAILGGATDPEVEKLRKFARCIGFLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPK 243
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
L+G++ S++ A++L EA+ +LA FD +AAPL L N+I ++ NN
Sbjct: 244 LIGLEKSREFAEKLNREAQDQLAAFDIEKAAPLIALANYI-AYRNN 288
>gi|6277256|dbj|BAA86285.1| geranylgeranyl pyrophosphate synthase [Scoparia dulcis]
Length = 351
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 132/289 (45%), Positives = 194/289 (67%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F +Y KA +N+AL+ AV L P +HE+MRYSL GGKR+ LC+A+CE++GG
Sbjct: 58 FDFKKYMLEKASSVNKALESAVSLKEPLKIHESMRYSLLAGGKRVRPMLCLAACELVGGH 117
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S AM AC+IE++ TM+++ DDLPC+DND LRRG P+NH VFGE A+LA AL +
Sbjct: 118 PSTAMPAACSIEMIHTMSLMHDDLPCMDNDHLRRGHPTNHIVFGEDVAVLAGDALLAYSF 177
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+++A I++ + + SEG+ AGQ++DI SEG E+ L L +IH HKT
Sbjct: 178 EYLATATEGVLPERIVRVIAELAKCIRSEGLLAGQVVDICSEGVSEIGLEHLEYIHLHKT 237
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E S+V G I+GGGN+EE+ER+R F + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 238 AALLEGSVVLGAILGGGNDEEVERLRKFARCIGLLFQVVDDILDVTKTSVELGKTAGKDL 297
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DK TYPKL+GI+ S++ A++L EA+++L FD +AAPL L N+I
Sbjct: 298 VADKTTYPKLIGIEKSREFAEKLNREAQEQLVGFDSDKAAPLIALANYI 346
>gi|125525184|gb|EAY73298.1| hypothetical protein OsI_01173 [Oryza sativa Indica Group]
Length = 314
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 194/290 (66%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y + +A +N+ALD A+P P L E+MRYS L GGKR+ L +A+CE++GG
Sbjct: 20 FDFQRYLSARADAVNDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGD 79
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A +ACA+E++ TM++I DD+PC+D+D LRRG+PSNH FGE TA+LA ALH LA
Sbjct: 80 AAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAF 139
Query: 133 QHIA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+H+A + + SA G+ G+AAGQ+ D SEG VSL+ L +IH HK
Sbjct: 140 EHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHK 199
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T + +EA+ VSG I+GGG + E+ER+R + + VG+ +Q+ +D++D+ + E KT G+D
Sbjct: 200 TARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKD 259
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G+D ++++A +L+A A+ EL FD RAAPL HL FI
Sbjct: 260 VEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFI 309
>gi|297836610|ref|XP_002886187.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
gi|297332027|gb|EFH62446.1| hypothetical protein ARALYDRAFT_900253 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 197/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ IN ALD+A+PL P +++AMRY++ GGKR+ LC+A+CE++GG
Sbjct: 110 FGFKPYMIRKAETINRALDKAIPLIEPLNIYKAMRYTIFAGGKRVRPILCLAACELVGGG 169
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A+ AC++E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA
Sbjct: 170 ERSAIPAACSVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAF 229
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + K + ++G++G+ AGQ MD++SEG + L +L +IH HKT
Sbjct: 230 EHLTEADVSSKKMVRVVKELAKSIGTKGLVAGQAMDLSSEGLDPNDFRLEDLEYIHVHKT 289
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS V G +IGGG+EEEIE++R+F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 290 GALLEASAVIGAVIGGGSEEEIEKVRSFARCIGLLFQVVDDILDETKSSEELGKTAGKDK 349
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYP+++G++ SK+ K+L +A++ L FD + PL L NFI + N
Sbjct: 350 VAGKLTYPRVIGLEKSKEFVKKLNRDAREHLQGFDEDKVKPLIALTNFIANRNN 403
>gi|1229164|gb|AAB67730.1| pregeranygeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 378
Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/289 (44%), Positives = 188/289 (65%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F+ + Y KA+ +N+AL+EA+P+ P +HEAMRY+ L GKR+ LC+ASCE++GG
Sbjct: 85 FEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQ 144
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ + ACA+E++ TM++I+DDLPC+DNDDLRRGKP+ KV+GE AIL+ AL LA
Sbjct: 145 ENATIPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTDKVYGEGVAILSGGALLSLAF 204
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKT 180
+H+ + + + ++G+ G+ AGQ MDI+SEG EV L L FIH HKT
Sbjct: 205 EHMTTAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKT 264
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E + V G IIGGG++EEIE +R F + +G+ +Q+ +DI+D S E KT G+D
Sbjct: 265 AVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 324
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPKL+G++ SK+ K L +A+Q L F + APL L FI
Sbjct: 325 LAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFI 373
>gi|297719791|ref|NP_001172257.1| Os01g0248701 [Oryza sativa Japonica Group]
gi|5042458|gb|AAD38295.1|AC007789_21 putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|11320851|dbj|BAB18334.1| putative geranylgeranyl pyrophosphate synthase [Oryza sativa
Japonica Group]
gi|255673061|dbj|BAH90987.1| Os01g0248701 [Oryza sativa Japonica Group]
Length = 376
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 194/290 (66%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F Y + +A +++ALD A+P P L E+MRYS L GGKR+ L +A+CE++GG
Sbjct: 82 FDFQRYLSARADAVHDALDRAMPRGFPERLCESMRYSVLAGGKRVRPVLALAACELVGGD 141
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A +ACA+E++ TM++I DD+PC+D+D LRRG+PSNH FGE TA+LA ALH LA
Sbjct: 142 AAAATPVACAVEMIHTMSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAF 201
Query: 133 QHIA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+H+A + + SA G+ G+AAGQ+ D SEG VSL+ L +IH HK
Sbjct: 202 EHVARGCGDHGVPADRTLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHK 261
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T + +EA+ VSG I+GGG + E+ER+R + + VG+ +Q+ +D++D+ + E KT G+D
Sbjct: 262 TARLLEAAAVSGAIVGGGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKD 321
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G+D ++++A +L+A A+ EL FD RAAPL HL FI
Sbjct: 322 VEADKATYPKLLGVDKAREYAADLLAMAEAELDGFDAERAAPLRHLARFI 371
>gi|303271183|ref|XP_003054953.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
gi|226462927|gb|EEH60205.1| geranyl pyrophosphate synthase [Micromonas pusilla CCMP1545]
Length = 343
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/287 (48%), Positives = 187/287 (65%), Gaps = 17/287 (5%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y A K K I +AL ++VP +P LHE+MRYSL GGKR+ LCIA+CE++GG+ VAM
Sbjct: 52 YIADKNKAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMEVAM 111
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA AL A ++I
Sbjct: 112 PTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGR 171
Query: 138 IKAK------------NINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKTGK 182
K ++ VGSEG+ GQ++DI SEG EV+L L +IH HKTG
Sbjct: 172 ETPKSVPAERTLRVLVDVGKCVGSEGLVGGQVVDIMSEGADADEVTLETLKYIHAHKTGA 231
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMR 241
+E S+ SG I+ G EE++ER+ + + +G+A+Q+ +DI+D + E KT G+D
Sbjct: 232 LLEVSVTSGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAV 291
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KATYP LVG++ SKK A +LI EAK+ L +DP AAPL L +FI
Sbjct: 292 GKATYPSLVGLEESKKIADDLITEAKELLRDYDPKLAAPLLGLADFI 338
>gi|424513337|emb|CCO65959.1| geranylgeranyl pyrophosphate synthase [Bathycoccus prasinos]
Length = 376
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/289 (46%), Positives = 191/289 (66%), Gaps = 18/289 (6%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA 76
+Y K I +AL ++VP +P LHE+MRYSL GGKR+ L IA+CEM+GG+Q V
Sbjct: 83 KYVKEKNAAIEQALSDSVPTIYPERLHESMRYSLLAGGKRIRPCLAIAACEMVGGAQEVV 142
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA 136
M ACA+E++ TM++I DDLP +DNDD RRG P+NHKV+GE AILA AL A ++IA
Sbjct: 143 MPTACALEMIHTMSLIHDDLPMMDNDDFRRGVPTNHKVYGEEMAILAGDALLSHAFEYIA 202
Query: 137 ----------IIKA-KNINSAVGSEGIAAGQIMDINS-----EGKEVSLSELNFIHRHKT 180
I++ ++ VGSEG+ GQ++DI S EGK VSL L +IH HKT
Sbjct: 203 RETKGVPAEKILRVIADVGKCVGSEGLVGGQVVDIESEGLAMEGKPVSLETLKYIHAHKT 262
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E ++VSG I+GGG EE+IER+ + +G+A+Q+ +DI+D + E KT G+D+
Sbjct: 263 GALLETAVVSGAILGGGTEEDIERLGKYAYDIGLAFQVVDDILDCTATSEELGKTAGKDV 322
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KATYP L+G++ S++ A ELI AK++L+ +D +AAPL L ++I
Sbjct: 323 AVGKATYPSLLGLEESQRIADELIKSAKEQLSVYDQKKAAPLIGLADYI 371
>gi|168042697|ref|XP_001773824.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674939|gb|EDQ61441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 257 bits (656), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 140/289 (48%), Positives = 205/289 (70%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y KAK +N ALD+AVP+ +P + EAMRYSL GGKR+ LCIA+CE++GG+
Sbjct: 39 FDLDSYLRAKAKAVNVALDKAVPMQYPEKIREAMRYSLLAGGKRVRPALCIAACELVGGN 98
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +AM ACA+E++ TM++I DDLPC+D+DDLRRGKP+NHK FGE TA+LA AL A
Sbjct: 99 EDLAMPSACAMEMVHTMSLIHDDLPCMDDDDLRRGKPTNHKAFGEDTAVLAGDALLAYAF 158
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+HIA +++ ++ AVGSEG+ AGQI+DI SEG + V L L ++H HKT
Sbjct: 159 EHIARATTGVPADRVLRVIAHLGKAVGSEGLVAGQIVDIASEGDRTVGLEILEYVHTHKT 218
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+E+++VSG I+GG +E+EI R+ N+ + VG+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 219 AVLLESAVVSGAILGGASEDEISRLSNYARNVGLLFQVVDDILDVTKSSAELGKTAGKDL 278
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ DKATYPKL+G++ S+ A+ELI +AK +L+ FD + APL L ++I
Sbjct: 279 VADKATYPKLLGLEKSRAFAEELIRKAKDQLSVFDQQKVAPLLGLADYI 327
>gi|126030920|pdb|2J1P|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
gi|126030921|pdb|2J1P|B Chain B, Geranylgeranyl Diphosphate Synthase From Sinapis Alba In
Complex With Ggpp
Length = 293
Score = 256 bits (655), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 185/291 (63%), Gaps = 29/291 (9%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y KA +N+ALD AVPL P +HEA RYSL GGKR+ LCIA+CE++GG +S+A
Sbjct: 16 YIIRKADSVNKALDSAVPLREPLKIHEAXRYSLLAGGKRVRPVLCIAACELVGGEESLAX 75
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACA+E + T ++I DDLPC DNDDLRRGKP+NHKV+GE A+LA AL A +H+A
Sbjct: 76 PAACAVEXIHTXSLIHDDLPCXDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLAS 135
Query: 138 IKAKNIN------------SAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKTGK 182
+ ++ A+G+EG+ AGQ++DI+SEG + V L L FIH HKT
Sbjct: 136 ATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAA 195
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD 242
+EAS V G IIGGG++EEIER+R F + +G+ +Q+ +DI+DV S
Sbjct: 196 LLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKS-------------S 242
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
K TYPKL G++ S++ A++L EA+ +L FD + APL L N+I + N
Sbjct: 243 KLTYPKLXGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 293
>gi|359458569|ref|ZP_09247132.1| geranylgeranyl diphosphate synthase [Acaryochloris sp. CCMEE 5410]
Length = 316
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/294 (44%), Positives = 191/294 (64%), Gaps = 15/294 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + +Y + + + + ALD ++P+ +P ++EAMRYSL GGKRL LC+A+CE+
Sbjct: 21 PSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLMAGGKRLRPILCLAACELA 80
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHK +GE AILA L
Sbjct: 81 GGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLA 140
Query: 130 LAMQHIAIIKAK-----------NINSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHR 177
A +H+AI + + AV + G+ GQ++D+ SEG E V+LS LNFIH
Sbjct: 141 YAYEHVAIQTQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHA 200
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTG +EAS++SG + G N++ ++R F + +G+A+Q+ +D++DV + E KT G
Sbjct: 201 HKTGALLEASVLSGAELAGANQDLLDRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAG 260
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ KATYP L GI SK+ A+ LI EAK ELA + ++APL L +FI S
Sbjct: 261 KDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITS 313
>gi|443314084|ref|ZP_21043676.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
gi|442786319|gb|ELR96067.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 6406]
Length = 306
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 196/304 (64%), Gaps = 15/304 (4%)
Query: 1 IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMS 59
++ DTLP+ F + Y + + K++ ALD ++PL +P ++EAMRYSL GGKRL
Sbjct: 1 MVTPPSTDTLPQSFDLKTYLSDRQKRVEAALDASLPLAYPETIYEAMRYSLLAGGKRLRP 60
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
LC+A+CE++GG+ + AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+GE
Sbjct: 61 ILCLAACELMGGTTAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDV 120
Query: 120 AILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EV 167
AILA AL A +HIA +++ ++ AVG+EG+ GQI+D+ SEG EV
Sbjct: 121 AILAGDALLTYAFEHIARYTTDVPADRVLRVIADLGRAVGAEGLVGGQIVDLASEGDLEV 180
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG 227
++ LN+IH HKTG +E S+ SG I+ G E I + + + +G+A+Q+ +D++D+
Sbjct: 181 TVDTLNYIHVHKTGALLELSVTSGAILAGAGETAIATLSGYAQRIGLAFQIVDDVLDITA 240
Query: 228 -SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
S E+ + G+D+ KATYP GID S++ A++LI EAK + +APL L +
Sbjct: 241 TSEELGKSAGKDLQAQKATYPSFWGIDESRRQAQQLIDEAKAAVLPLG-ADSAPLLALAD 299
Query: 287 FIVS 290
+IV+
Sbjct: 300 YIVA 303
>gi|145352919|ref|XP_001420781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581016|gb|ABO99074.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 188/279 (67%), Gaps = 16/279 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
+I ALD +VP+ +P L E+MRYSL GGKR+ LC+A+CE++GG+ VAM ACA+E
Sbjct: 29 EIERALDASVPMHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGTMEVAMPTACALE 88
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-------- 136
++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA AL A ++I
Sbjct: 89 MIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGRETKGVSA 148
Query: 137 --IIKA-KNINSAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKTGKFIEASIVS 190
+++ ++ VGSEG+ GQ++DI SEG + V++ L +IH HKTG +E S+ +
Sbjct: 149 DKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGADEGTVTIDTLKYIHAHKTGALLEVSVTA 208
Query: 191 GVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKL 249
G I+GG +EE+I ++ + + +G+A+Q+ +DI+D + E KT G+DM K+TYP L
Sbjct: 209 GAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTATSEELGKTAGKDMAVGKSTYPSL 268
Query: 250 VGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
VG++ SK+ A +LI++AKQEL FDP + PL L ++I
Sbjct: 269 VGMEESKRIAADLISKAKQELEGFDPVKVKPLIGLADYI 307
>gi|86605096|ref|YP_473859.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
gi|86553638|gb|ABC98596.1| geranylgeranyl diphosphate synthase [Synechococcus sp. JA-3-3Ab]
Length = 297
Score = 254 bits (648), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/291 (45%), Positives = 191/291 (65%), Gaps = 14/291 (4%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
+ F ++ Y + + +Q+ EAL A+ +P ++EAMRYSL GGKRL LC+A+CE+ G
Sbjct: 4 QTFNLDTYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAG 63
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GS AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKVFGE AILA AL
Sbjct: 64 GSVEQAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAY 123
Query: 131 AMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
A +HIA +++ I AV + G+ GQ++D+ SEGK +SL L +IH HK
Sbjct: 124 AFEHIASQTRGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHK 183
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EAS+VSG I+ G +EE + R+ ++ + +G+A+Q+ +DI+DV + E KT G+D
Sbjct: 184 TGALLEASVVSGGILAGADEELLARLSHYARDIGLAFQIVDDILDVTATSEQLGKTAGKD 243
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KATYP L+G++ S++ A+ELI AK+ L + ++A PL L +FI
Sbjct: 244 QAAAKATYPSLLGLEASRQKAEELIQSAKEALRPYG-SQAEPLLALADFIT 293
>gi|15231055|ref|NP_188651.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
gi|75273683|sp|Q9LJY2.1|GGPPA_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 10,
mitochondrial; Short=GGPP synthase 10; Short=GGPS10;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 10;
AltName: Full=Dimethylallyltranstransferase 10; AltName:
Full=Farnesyl diphosphate synthase 10; AltName:
Full=Farnesyltranstransferase 10; AltName:
Full=Geranyltranstransferase 10; Flags: Precursor
gi|9293973|dbj|BAB01876.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|91806447|gb|ABE65951.1| geranylgeranyl pyrophosphate synthase/GGPP
synthetase/farnesyltranstransferase [Arabidopsis
thaliana]
gi|332642821|gb|AEE76342.1| geranylgeranyl diphosphate synthase 10 [Arabidopsis thaliana]
Length = 344
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 194/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F+ Y KAK +N+AL+EAVPL P + + EAMRY+L GKR+ LC+A+CE++GG
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AMS ACAIE+L ++I DDLPC+DND LRRGKP+NH VFGE+ AILA QAL LA
Sbjct: 108 QESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALA 167
Query: 132 MQH-----IAIIKAKNINSAV-----GSEGIAAGQIMDINSEG----KEVSLSELNFIHR 177
+Q A + + I V EG+ AGQ D+ EG + L L FIH
Sbjct: 168 VQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHI 227
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V G I+GGG++EEIER+R++ + +G+ +Q+ +D++DV S E KT G
Sbjct: 228 HKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 287
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D++ K TYP+L+G++ SK++A+ L EA++ L FD + APL L ++IV+ N
Sbjct: 288 KDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|116831222|gb|ABK28565.1| unknown [Arabidopsis thaliana]
Length = 345
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 194/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F+ Y KAK +N+AL+EAVPL P + + EAMRY+L GKR+ LC+A+CE++GG
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AMS ACAIE+L ++I DDLPC+DND LRRGKP+NH VFGE+ AILA QAL LA
Sbjct: 108 QESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALA 167
Query: 132 MQH-----IAIIKAKNINSAV-----GSEGIAAGQIMDINSEG----KEVSLSELNFIHR 177
+Q A + + I V EG+ AGQ D+ EG + L L FIH
Sbjct: 168 VQKTTSSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHI 227
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V G I+GGG++EEIER+R++ + +G+ +Q+ +D++DV S E KT G
Sbjct: 228 HKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 287
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D++ K TYP+L+G++ SK++A+ L EA++ L FD + APL L ++IV+ N
Sbjct: 288 KDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344
>gi|356572072|ref|XP_003554194.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Glycine max]
Length = 343
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 203/309 (65%), Gaps = 25/309 (8%)
Query: 4 SQRNDTLP----KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLM 58
S N TLP F Y K +N ALD AV L P LHEAMRY+L GGKR+
Sbjct: 31 SSVNSTLPFSSAPNFDFKAYMLDKINTVNRALDAAVALREPRKLHEAMRYTLLAGGKRIR 90
Query: 59 STLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEA 118
LC+A+C ++GGS++ A+ ACA+E++ TM++I DDLPC+DNDDLRRGKP++HK+FGE
Sbjct: 91 PVLCLAACSLVGGSEATAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIFGEH 150
Query: 119 TAILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEV 167
A+LA AL LA +H+A +++A + +G+EG+ AGQ++D+NSEG +
Sbjct: 151 VAVLAGDALLALAFEHVAASTEGAYAARVVRAIGELAKCIGAEGVMAGQVVDVNSEGLTL 210
Query: 168 SLSE-------LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWN 220
S+S+ L FIH HKT +E ++V G I+GGG++EEIER+R FG+ +G+ Q+ +
Sbjct: 211 SMSDEVAVLERLEFIHVHKTA-VVEGAVVMGAILGGGSDEEIERLRMFGRCIGLLGQVVD 269
Query: 221 DIVDVIGSPEMREKTG-RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAA 279
D++DV S E KT +D++ DK TYPK++GI SK+ A +L+ +A + LA F P +AA
Sbjct: 270 DVLDVTKSSEELGKTAKKDLVADKLTYPKVLGIHESKEFAHKLVHDANKMLAGFHPPKAA 329
Query: 280 PLDHLVNFI 288
PL L N+I
Sbjct: 330 PLFALTNYI 338
>gi|86609315|ref|YP_478077.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557857|gb|ABD02814.1| geranylgeranyl diphosphate synthase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 297
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 187/289 (64%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + +Q+ EAL A+ +P ++EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 6 FNLKAYLSQRQQQVEEALSAALVPAYPERIYEAMRYSLLAGGKRLRPILCLAACELAGGT 65
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E++ TM++I DDLP +DNDD RRGKP+NHKVFGE AILA AL A
Sbjct: 66 VEQALPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVFGEDIAILAGDALLAFAF 125
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+HIA +++ I AV + G+ GQ++D+ SEGK +SL L +IH HKTG
Sbjct: 126 EHIASQTQGVPPQLVLQVIARIGHAVAATGLVGGQVVDLESEGKAISLETLEYIHSHKTG 185
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+E S+VSG I+ GG+EE + + + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 186 ALLEVSVVSGGILAGGDEELLAHLSRYARDIGLAFQIVDDILDITATSEQLGKTAGKDQA 245
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KATYP L+G++ S++ A+ELI AK+ L + P RA PL L +FI
Sbjct: 246 AAKATYPSLLGLEASRQKAEELIQSAKETLRPYGP-RAEPLLALADFIT 293
>gi|359477279|ref|XP_002275812.2| PREDICTED: geranylgeranyl pyrophosphate synthase 1,
chloroplastic-like [Vitis vinifera]
Length = 380
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/290 (45%), Positives = 195/290 (67%), Gaps = 16/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KAK +N+ALD A+PL P +H+AMRYSL GGKR+ +CI++CE++GG
Sbjct: 85 FNFKAYMLEKAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQ 144
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+S AM + CA+E+L ++++QDDLPC+DNDD+RRGKPSNHK FGE+ ILA AL LA
Sbjct: 145 ESTAMPVVCAVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGESVTILAVDALLALAF 204
Query: 133 QHIAIIKA-------------KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRH 178
+H+A + + + ++GS+G+ AGQ +D++SEG E+ L L IH +
Sbjct: 205 EHVATMSTVGVVPPMVTVHAIQELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHIN 264
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
K G +EAS V G ++GGG+ E++E +R FG+ VG+ YQ+ +DI+D+ S + KT G+
Sbjct: 265 KAGPLLEASAVIGAMLGGGSSEQMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGK 324
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
D++ DK TYPKLVGI+ S++ A++L +A L+ FD +AA L +VNF
Sbjct: 325 DLVADKVTYPKLVGIEKSREFAEKLNGDAWDMLSEFDQEKAASLLAMVNF 374
>gi|255080134|ref|XP_002503647.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
gi|226518914|gb|ACO64905.1| geranyl pyrophosphate synthase [Micromonas sp. RCC299]
Length = 349
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/287 (46%), Positives = 186/287 (64%), Gaps = 17/287 (5%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y A K I +AL ++VP +P LHE+MRYSL GGKR+ LCIA+CE++GG+ VAM
Sbjct: 58 YIAEKNAAIEQALSDSVPEMYPERLHESMRYSLLAGGKRIRPCLCIAACELMGGTMDVAM 117
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA AL A ++I
Sbjct: 118 PTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAFEYIGR 177
Query: 138 IKAK------------NINSAVGSEGIAAGQIMDINSEGK---EVSLSELNFIHRHKTGK 182
K ++ VGSEG+ GQ++DI SEG EV++ L +IH HKTG
Sbjct: 178 ETPKSVPAERTLRVIVDVGKCVGSEGLVGGQVVDIMSEGAEAGEVTVETLQYIHAHKTGA 237
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMR 241
+E S+ +G I+ G EE++ER+ + + +G+A+Q+ +DI+D + E KT G+D
Sbjct: 238 LLEVSVTAGAILAGAKEEDVERLGKYAQLIGLAFQVVDDILDCTQTSEQLGKTAGKDEAV 297
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KATYP LVG++ SKK A +LIA+AK L +D +AAPL L ++I
Sbjct: 298 GKATYPSLVGLEESKKIADKLIADAKDLLKDYDQEKAAPLIGLADYI 344
>gi|158337967|ref|YP_001519143.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
gi|158308208|gb|ABW29825.1| geranylgeranyl diphosphate synthase [Acaryochloris marina
MBIC11017]
Length = 301
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/294 (44%), Positives = 190/294 (64%), Gaps = 15/294 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + +Y + + + + ALD ++P+ +P ++EAMRYSL GGKRL LC+A+CE+
Sbjct: 6 PSNFNLVDYLSQRRELVEAALDASIPVVYPEKIYEAMRYSLLAGGKRLRPILCLAACELA 65
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHK +GE AILA L
Sbjct: 66 GGTIEMAMPTACALEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKKYGEDIAILAGDGLLA 125
Query: 130 LAMQHIAIIKAK-----------NINSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHR 177
A +H+AI + + AV + G+ GQ++D+ SEG E V+LS LNFIH
Sbjct: 126 YAYEHVAIETQQVPPEQVLKVVARLGHAVAATGLVGGQVVDLESEGAEDVTLSTLNFIHA 185
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTG +EAS++SG + G +++ + R F + +G+A+Q+ +D++DV + E KT G
Sbjct: 186 HKTGALLEASVLSGAELAGASQDLLNRCSKFARNIGLAFQIIDDVLDVTATSEKLGKTAG 245
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ KATYP L GI SK+ A+ LI EAK ELA + ++APL L +FI S
Sbjct: 246 KDVAAQKATYPSLWGIPESKRQAQHLIEEAKAELAVYG-EQSAPLQALADFITS 298
>gi|434399896|ref|YP_007133900.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
gi|428270993|gb|AFZ36934.1| Farnesyltranstransferase [Stanieria cyanosphaera PCC 7437]
Length = 320
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 192/295 (65%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F +N Y + + +ALD ++P+ PA ++EAMRYSL GGKRL LC+A+CE+ GGS
Sbjct: 28 FDLNSYLKQQKILVEQALDSSLPINQPAKIYEAMRYSLLAGGKRLRPILCLATCELTGGS 87
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 88 NEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 147
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + KN+ + VG+EG+ GQ++D+ SEGK ++S L FIH HK
Sbjct: 148 EYVA-TQTKNVPAERIVKVIARLGRTVGAEGLVGGQVLDLESEGKSDISAETLTFIHTHK 206
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EAS+VSG I+ G +EE++ R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 207 TGALLEASVVSGAILSGASEEDLARLSKYAQNIGLAFQIIDDILDITATDEQLGKTAGKD 266
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L GI+ S+ A++LI EA +L + +A PL+ + FIV+ N
Sbjct: 267 LQAQKATYPSLWGIEKSQHQAEKLINEAIAQLKPYG-NKAKPLEAIARFIVTRNN 320
>gi|334119738|ref|ZP_08493823.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
gi|333457900|gb|EGK86521.1| Farnesyltranstransferase [Microcoleus vaginatus FGP-2]
Length = 308
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/295 (44%), Positives = 191/295 (64%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + + I ALD A+P+ +P ++EAMRYSL GGKRL LC+ASCE+ GG+
Sbjct: 16 FDLSTYLVKRKEAIEVALDSALPVIYPEKIYEAMRYSLLAGGKRLRPILCLASCELAGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 TSMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLTYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ IA K +N+ A G+ G+ GQ++D+ SEGK +VSL LN+IH HK
Sbjct: 136 EFIA-TKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIHAHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA +V G I+ G + +++R+ F + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 195 TGALLEACVVCGAILAGASAADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYP L GI+ S++ A +L+A+AK +LA F ++A PL + +FI S N
Sbjct: 255 VQAGKVTYPSLWGIEESRRQASQLVADAKDQLAVFG-SKALPLLAIADFITSRSN 308
>gi|427418987|ref|ZP_18909170.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
gi|425761700|gb|EKV02553.1| geranylgeranyl pyrophosphate synthase [Leptolyngbya sp. PCC 7375]
Length = 302
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 189/291 (64%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F +N Y A K + ALD+++ + +P I++E+MRYS + GGKRL LC+A+CE++GG+
Sbjct: 10 FDLNSYLATKGADVEAALDQSLAVVYPEIIYESMRYSVMAGGKRLRPILCLATCELVGGT 69
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA AL A
Sbjct: 70 SAQAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDVAILAGDALLAYAF 129
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ IA + + + AVG+ G+ GQI+D+ SEGK + S+ LNFIH HKT
Sbjct: 130 EFIADRTEDVPATAVLDVIRRLGHAVGAAGLVGGQIVDLASEGKPDTSIETLNFIHIHKT 189
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDM 239
+E S+VSG ++ G + + IER+ + + +G+A+Q+ +D++DV + E+ + G+D+
Sbjct: 190 AALLEVSVVSGAVLAGADNDTIERLSRYAQNIGLAFQIVDDVLDVTSTQEELGKSIGKDI 249
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP + G+D S+K A ELI AK+EL F P + PL + +FI +
Sbjct: 250 QAQKATYPSIWGLDESRKKADELIQAAKEELEPFGPLK-RPLVAIADFITA 299
>gi|308809942|ref|XP_003082280.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
gi|116060748|emb|CAL57226.1| geranylgeranyl diphosphate synthase (ISS) [Ostreococcus tauri]
Length = 345
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 190/291 (65%), Gaps = 18/291 (6%)
Query: 15 QVNEY-KALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ N Y K + AK I ALD +VP+ +P L E+MRYSL GGKR+ LC+A+CE++GG
Sbjct: 51 EFNAYIKGVNAK-IERALDASVPVHYPERLSESMRYSLLAGGKRIRPALCLAACELVGGD 109
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA AL A
Sbjct: 110 METAMPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEEMAILAGDALLSHAF 169
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRH 178
++I +++ ++ VGSEG+ GQ++DI SEG + V++ L +IH H
Sbjct: 170 EYIGRETKGASAEKVLRVIVDVGKCVGSEGLVGGQVVDIMSEGAGPENVTVDTLKYIHAH 229
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG +E S+ +G I+GG +EE+I ++ + + +G+A+Q+ +DI+D S E KT G+
Sbjct: 230 KTGALLEVSVTAGAILGGASEEQIGKLERYAQNIGLAFQVVDDILDCTASSEELGKTAGK 289
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
D+ K TYP LVG++ SK+ A +LI++AK EL FDP + PL L ++I
Sbjct: 290 DVAVGKTTYPSLVGMEESKRIAADLISKAKAELEGFDPVKVRPLIGLADYI 340
>gi|411120370|ref|ZP_11392744.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
gi|410709751|gb|EKQ67264.1| geranylgeranyl pyrophosphate synthase [Oscillatoriales
cyanobacterium JSC-12]
Length = 308
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 190/292 (65%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y A + Q+ ALD ++P+ +P ++EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 16 FDLATYLAERQAQVEAALDRSLPIIYPEKIYEAMRYSLMAGGKRLRPILCLATCELTGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 76 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDVAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+H+A I+ K + AVG+ G+ GQ++D+ EGK +VSL LNFIH HK
Sbjct: 136 EHVA-IETKGVAPERLLKVVAMLGRAVGAAGLVGGQVVDLECEGKSDVSLETLNFIHNHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EAS+ SG ++ G ++E+++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 195 TAALLEASVTSGAVLSGASDEDVQRLLRYAQNIGLAFQIVDDILDITATQEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ KATYP + G++ S++ A +LI++AK EL F +A L + +FI +
Sbjct: 255 LTAQKATYPSIWGLEESRRQADKLISDAKSELGLFGE-KAIALVAIADFITA 305
>gi|428311367|ref|YP_007122344.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
gi|428252979|gb|AFZ18938.1| geranylgeranyl pyrophosphate synthase [Microcoleus sp. PCC 7113]
Length = 309
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/292 (43%), Positives = 189/292 (64%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + Q+ ALD ++PL +P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 17 FDLSTYLKQRQAQVEAALDRSLPLTYPEKIYEAMRYSLLAGGKRLRPILCLATCELVGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA L A
Sbjct: 77 LEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAF 136
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
+++A + +N+ + AVG+ G+ GQ++D+ SEG ++ L FIH HK
Sbjct: 137 EYVA-TQTQNVPAHQVLQVVARLGRAVGAAGLVGGQVVDLESEGNSDIQEETLTFIHTHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA +V G I+GG +EEIER+ + K +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TGALLEACVVCGGILGGVTDEEIERLSRYAKNIGLAFQIVDDILDITATQEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ KATYP L GI+ SK A++LI AK EL F +A PL + +FI +
Sbjct: 256 LLAQKATYPSLWGIEASKTKAQQLIDAAKAELELFGE-KAQPLLAIADFITT 306
>gi|428320077|ref|YP_007117959.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
gi|428243757|gb|AFZ09543.1| Farnesyltranstransferase [Oscillatoria nigro-viridis PCC 7112]
Length = 308
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 191/295 (64%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + + I ALD A+P+ +P ++EAMRYSL GGKRL LC+ASCE+ GG+
Sbjct: 16 FDLSAYLVKRKEAIEVALDSALPVIYPETIYEAMRYSLLAGGKRLRPILCLASCELAGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 TSMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLTYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ IA K +N+ A G+ G+ GQ++D+ SEGK +VSL LN+IH HK
Sbjct: 136 EFIA-TKTQNVPPQQVLQTIAHLARASGAAGLVGGQVVDLESEGKTDVSLETLNYIHAHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA +V G I+ G + +++R+ F + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 195 TGALLEACVVCGGILAGASTADLQRLSRFAQNIGLAFQIIDDILDITATQEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYP L GI+ S++ A +L+A+AK +LA F ++A PL + +FI S N
Sbjct: 255 VQAGKVTYPSLWGIEESRRQASQLVADAKAQLAVFG-SKALPLLAIADFITSRSN 308
>gi|186683902|ref|YP_001867098.1| polyprenyl synthetase [Nostoc punctiforme PCC 73102]
gi|186466354|gb|ACC82155.1| Polyprenyl synthetase [Nostoc punctiforme PCC 73102]
Length = 310
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 190/306 (62%), Gaps = 16/306 (5%)
Query: 3 NSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTL 61
N Q+ F + Y + K + ALD A+P+ +P ++EAMRYSL GGKR+ L
Sbjct: 6 NVQKTPPEEATFNLVAYLKERQKLCDNALDRAIPIIYPEKIYEAMRYSLLAGGKRVRPIL 65
Query: 62 CIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAI 121
C+A+CEM+GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AI
Sbjct: 66 CLATCEMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAI 125
Query: 122 LACQALHCLAMQHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGK-EVS 168
LA L LA + +A+ N+N A+G+ G+ GQ++D+ EGK ++S
Sbjct: 126 LAGDGLLALAFELVALKTPANVNRELTLQVIVRLGRALGAAGLVGGQVVDLECEGKSDIS 185
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
L LNFIHRHKT +EA +VSG II G + E+++R+ + + +G+A+Q+ +DI+D+ +
Sbjct: 186 LETLNFIHRHKTSALLEACVVSGGIIAGASTEDVQRLTRYAENIGLAFQIIDDILDITST 245
Query: 229 PEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
E KT G+D K TYP L G++ S+ A+EL+ A EL F RA PL + +F
Sbjct: 246 KEQLGKTAGKDQKAKKVTYPSLWGLEESRLKAQELVKVACAELEPFG-DRAKPLQAIAHF 304
Query: 288 IVSFGN 293
I S N
Sbjct: 305 ITSRNN 310
>gi|325516282|gb|ADZ24719.1| geranylgeranyl pyrophosphate synthase 2 [Solanum pennellii]
Length = 363
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 197/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A KA +N ALDEA+ + P ++HEAMRYSL GGKR+ LC A+CE++GG+
Sbjct: 70 FDFKVYVAEKAICVNRALDEAIMVKDPPMIHEAMRYSLLAGGKRVRPMLCFAACELVGGN 129
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q AM+ ACA+E++ TM++I DDLPC+D+DDLRRGKP+NHKV+GE A+LA AL A
Sbjct: 130 QGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAF 189
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A ++ + +VG+EG+ AGQ+ D+ G V L L FIH HKT
Sbjct: 190 EYLATATIGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKT 249
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EAS+V G I+GGG +EE++++R F + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 250 AALLEASVVIGAILGGGADEEVDKLRRFARCIGLLFQVVDDILDVTKSSSELGKTAGKDL 309
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DK TYPKL+G++ +K+ A EL EAKQ+LA FD +AAPL L ++I + N
Sbjct: 310 AVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|15231877|ref|NP_188071.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
gi|75274215|sp|Q9LUE1.1|GGPP9_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 9,
chloroplastic; Short=GGPP synthase 9; Short=GGPS9;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 9;
AltName: Full=Dimethylallyltranstransferase 9; AltName:
Full=Farnesyl diphosphate synthase 9; AltName:
Full=Farnesyltranstransferase 9; AltName:
Full=Geranyltranstransferase 9; Flags: Precursor
gi|9294375|dbj|BAB02385.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|34365549|gb|AAQ65086.1| At3g14530 [Arabidopsis thaliana]
gi|332642014|gb|AEE75535.1| geranylgeranyl diphosphate synthase 9 [Arabidopsis thaliana]
Length = 360
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/297 (45%), Positives = 199/297 (67%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHIAIIKAK------------NINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H+ ++ + + A+G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V GVI+GGG E+EIE++R + + +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++GS++ A++L EA+++L FDP++AAPL L ++I N
Sbjct: 304 KDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|194477224|ref|YP_002049403.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
gi|171192231|gb|ACB43193.1| geranylgeranyl pyrophosphate synthase [Paulinella chromatophora]
Length = 300
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 191/291 (65%), Gaps = 18/291 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y + + ALD ++ P L EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 9 FDFAAYLRAARESVELALDGSLGTERPTSLSEAMRYSLLAGGKRLRPILCLAACELAGGN 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+GEATAILA AL A
Sbjct: 69 VAAAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEATAILAGDALLTRAF 128
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A I+K ++ A G+ G+ GQ++D+ SEGKEV+L L +IH HKTG
Sbjct: 129 EIVALRSPGVSPECILKVIGELSLAAGAPGLVGGQMVDLESEGKEVNLDTLEYIHLHKTG 188
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A ++ G +IG ++E ++ +RN+ + +G+A+Q+ +DI+DV S ++ KT G+D++
Sbjct: 189 ALLSACVICGGLIGDASDELLQALRNYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLV 248
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIV 289
DK TYPKL+G+ S++ A++L+AEAKQ L DP RAAPL L ++I
Sbjct: 249 ADKTTYPKLLGLKASRERAEQLVAEAKQGL---DPWRDRAAPLLALADYIT 296
>gi|350537639|ref|NP_001234302.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
gi|82547882|gb|ABB82555.1| geranylgeranyl pyrophosphate synthase 2 [Solanum lycopersicum]
Length = 363
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/294 (46%), Positives = 198/294 (67%), Gaps = 14/294 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A KA +N+ALDEA+ + P +HEAMRYSL GGKR+ LC+A+CE++GG+
Sbjct: 70 FNFKVYVAEKAICVNKALDEAIMVKDPPKIHEAMRYSLLAGGKRVRPMLCLAACELVGGN 129
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q AM+ ACA+E++ TM++I DDLPC+D+DDLRRGKP+NHKV+GE A+LA AL A
Sbjct: 130 QGNAMAAACAVEMIHTMSLIHDDLPCMDDDDLRRGKPTNHKVYGEDVAVLAGDALLAFAF 189
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A ++ + +VG+EG+ AGQ+ D+ G V L L FIH HKT
Sbjct: 190 EYLATATTGVPPSRILVAVAELAKSVGTEGLVAGQVADLACTGNPNVGLEMLEFIHIHKT 249
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDM 239
+EAS+V G I+GGG +EE++++R F + +G+ +Q+ +DI+DV S E+ + G+D+
Sbjct: 250 AALLEASVVIGAILGGGADEEVDKLRRFAQCIGLLFQVVDDILDVTKSSSELGKTAGKDL 309
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DK TYPKL+G++ +K+ A EL EAKQ+LA FD +AAPL L ++I + N
Sbjct: 310 AVDKTTYPKLLGLEKAKEFAAELNGEAKQQLAAFDSHKAAPLIALADYIANRQN 363
>gi|352093628|ref|ZP_08954799.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
gi|351679968|gb|EHA63100.1| Polyprenyl synthetase [Synechococcus sp. WH 8016]
Length = 312
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 191/296 (64%), Gaps = 18/296 (6%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
LP F Y L ++ ALD ++ P L +AMRYSL GGKRL LC+A+CE+
Sbjct: 17 LPSSFDFAAYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACEL 76
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+GGS +AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA A+
Sbjct: 77 VGGSPELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAML 136
Query: 129 CLAMQHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A + +A+ + A+ + V G+ G+ GQ++D+ SEG+ V L L +IH
Sbjct: 137 SRAFEMVAVRSANVPAERLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHL 196
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT + A +V+G +IGG ++++++ MR + +G+A+Q+ +DI+DV S E+ KT G
Sbjct: 197 HKTAALLRACVVTGALIGGASDQQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAG 256
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIVS 290
+D++ DK TYPKL+G++ S++ A +L+ E+K A DP R AAPL L +++ S
Sbjct: 257 KDLLADKTTYPKLLGLEASREKALQLVRESK---AALDPWRDKAAPLLALADYVAS 309
>gi|428215155|ref|YP_007088299.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
gi|428003536|gb|AFY84379.1| geranylgeranyl pyrophosphate synthase [Oscillatoria acuminata PCC
6304]
Length = 308
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 193/294 (65%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + + ALD+++P+ P+ ++EAMRYSL GGKRL LC+ASCE++GG+
Sbjct: 16 FDLSTYLGERQALVEAALDQSLPIKPPSTIYEAMRYSLLAGGKRLRPILCLASCELVGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA L A
Sbjct: 76 VEMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLVYAF 135
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ +A ++KA ++ A G++G+ GQ++DI EGK + ++ L+FIH HKT
Sbjct: 136 EVVATQTQNVPAPRVLKAIAHLAHAFGADGVVGGQVVDIQCEGKLDTTVETLHFIHTHKT 195
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EA +V G I+GG +E+++R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 196 GALLEACVVCGAILGGAADEDLQRLSRYAQNIGLAFQIIDDILDITKTQEELGKTAGKDL 255
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP + G++ S + A+ELI +AK ELA F +A PL L +FI + N
Sbjct: 256 QAQKATYPSIWGLEESTRQAQELIEQAKAELASFG-NKAIPLLTLADFITNRSN 308
>gi|313118274|sp|Q9LRR0.2|GGPP8_ARATH RecName: Full=Putative geranylgeranyl pyrophosphate synthase 8,
chloroplastic; Short=GGPP synthase 8; Short=GGPS8;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 8;
AltName: Full=Dimethylallyltranstransferase 8; AltName:
Full=Farnesyl diphosphate synthase 8; AltName:
Full=Farnesyltranstransferase 8; AltName:
Full=Geranyltranstransferase 8; Flags: Precursor
Length = 361
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 133/293 (45%), Positives = 196/293 (66%), Gaps = 18/293 (6%)
Query: 14 FQVNEYKALKAKQINEALDEA-VPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F Y KA+ +N ALD + VPL P + EA+RYSL GGKR+ LCIA CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGG 123
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKVFGE A+LA AL LA
Sbjct: 124 DEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALA 183
Query: 132 MQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEG---KEVSLSELNFIH 176
+H+ ++ + + S A+G++G+ AGQ++D++SE +V L L FIH
Sbjct: 184 FEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIH 243
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
HKT +EA+ V G I+GGG EEEIE++R + + +G+ +Q+ +DI+DV S E KT
Sbjct: 244 LHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTA 303
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D+M K TYP+L+G++ S++ A++L EA+++L F+ +AAPL L ++I
Sbjct: 304 GKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYI 356
>gi|116073079|ref|ZP_01470341.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
gi|116068384|gb|EAU74136.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9916]
Length = 317
Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 124/305 (40%), Positives = 194/305 (63%), Gaps = 18/305 (5%)
Query: 3 NSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTL 61
S R+ + F Y + + + ALD+++ P L EAMRYSL GGKRL L
Sbjct: 9 ESARSGGDQQAFDFKAYLGSQKQLVEAALDDSLGPERPESLREAMRYSLLAGGKRLRPIL 68
Query: 62 CIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAI 121
C+A+CE+ GG ++AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AI
Sbjct: 69 CLAACELAGGDPALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAI 128
Query: 122 LACQALHCLAMQHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLS 170
LA AL A + +++ + A+ + V G+ G+ GQ++D+ EGK+V L
Sbjct: 129 LAGDALLTRAFEMVSLRSPGVPAERLLKVVAELSLVAGAPGLVGGQVVDLECEGKDVDLD 188
Query: 171 ELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE 230
L +IH HKTG ++A +++G +IGG +E +++ +R + + +G+A+Q+ +DI+DV S +
Sbjct: 189 TLEYIHLHKTGALLKACVITGALIGGADEAQLDSLRTYARGIGLAFQIVDDILDVTASSD 248
Query: 231 MREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP-----TRAAPLDHL 284
+ KT G+D++ DK TYPKL+G++ S+ AK LI EAK L F P +AAPL L
Sbjct: 249 VLGKTAGKDLIADKTTYPKLLGLEESRLRAKGLIQEAKTSLDAFKPVGGGSVQAAPLLAL 308
Query: 285 VNFIV 289
++++
Sbjct: 309 ADYVI 313
>gi|440682769|ref|YP_007157564.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
gi|428679888|gb|AFZ58654.1| farnesyl-diphosphate synthase [Anabaena cylindrica PCC 7122]
Length = 309
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 189/292 (64%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K + ALD+A+P+ +P ++EAMRYSL GGKR+ LC+A+ EMIGG+
Sbjct: 16 FNLASYLKERQKLCDTALDQAIPVVYPEKIYEAMRYSLLAGGKRVRPILCLATSEMIGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L LA
Sbjct: 76 IEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLALAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +A +N+ A+G+ G+ GQ++D++SEGK ++SL LNFIH HK
Sbjct: 136 EFVATQTPQNVPRERALQVIARLGKALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +V G +I G + E++E++ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TAALLEACVVCGGVIAGASAEDVEKLTRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ +K TYP L GID S+ A++L+ A ELA F +A PL + ++IVS
Sbjct: 256 LKAEKVTYPSLWGIDESRAKAQQLVESACVELASFGE-KALPLQAIAHYIVS 306
>gi|170077705|ref|YP_001734343.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
gi|169885374|gb|ACA99087.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7002]
Length = 302
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 195/304 (64%), Gaps = 24/304 (7%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
D + F + +Y + + ALD+++ + P ++EAMRYSL GGKRL LC+A+C
Sbjct: 5 DAHTQGFSLAQYLQEQKTIVETALDQSLVITEPVTIYEAMRYSLLAGGKRLRPILCLAAC 64
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
EM+GG+ ++AM+ ACA+E++ TM++I DDLP +DNDDLRRGKP+NHKV+GE AILA A
Sbjct: 65 EMLGGTAAMAMNTACALEMIHTMSLIHDDLPAMDNDDLRRGKPTNHKVYGEDIAILAGDA 124
Query: 127 LHCLAMQHIA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSEL 172
L A +++A I++ + AVG+EG+ GQ++D+ SEGK +V++ L
Sbjct: 125 LLSYAFEYVARTPDVPAERLLQVIVR---LGQAVGAEGLVGGQVVDLESEGKTDVAVETL 181
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
NFIH HKTG +E + +G I+ G EE++ + + + +G+A+Q+ +DI+D+ + E
Sbjct: 182 NFIHTHKTGALLEVCVTAGAILAGAKPEEVQLLSRYAQNIGLAFQIVDDILDITATAEEL 241
Query: 233 EKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIV 289
KT G+D+ K TYP L GI+ S+ A++L+AEA +A +P +A PL L +IV
Sbjct: 242 GKTAGKDLEAQKVTYPSLWGIEKSQAEAQKLVAEA---IASLEPYGEKANPLKALAEYIV 298
Query: 290 SFGN 293
+ N
Sbjct: 299 NRKN 302
>gi|75274213|sp|Q9LUD9.1|GGPP3_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 3,
chloroplastic; Short=GGPP synthase 3; Short=GGPS3;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 3;
AltName: Full=Dimethylallyltranstransferase 3; AltName:
Full=Farnesyl diphosphate synthase 3; AltName:
Full=Farnesyltranstransferase 3; AltName:
Full=Geranyltranstransferase 3; Flags: Precursor
gi|9294377|dbj|BAB02387.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 197/297 (66%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHIAIIKAK------------NINSAVGSEGIAAGQIMDINSE---GKEVSLSELNFIHR 177
+H+ ++ + + A+G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V GVI+GGG EEEIE++R + + +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++ SK+ A++L EA+++L FDP++AAPL L ++I N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|428772609|ref|YP_007164397.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
gi|428686888|gb|AFZ46748.1| farnesyl-diphosphate synthase [Cyanobacterium stanieri PCC 7202]
Length = 294
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/295 (43%), Positives = 189/295 (64%), Gaps = 15/295 (5%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F + Y K K + ++LDE++P+ P ++E+MRYSL GGKRL LC+A+CE++GG
Sbjct: 1 MFDLQSYLKEKQKLVEKSLDESLPMGKPEKIYESMRYSLLAGGKRLRPILCLATCELMGG 60
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ +A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA L A
Sbjct: 61 TDEMALPSACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLTYA 120
Query: 132 MQHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + A+N+ AVG+EG+ GQ+MD+ EGK +V+ L+FIH HK
Sbjct: 121 FEYVARETKGVPAENVLEVIKILTKAVGAEGLVGGQVMDLECEGKTDVTAEMLSFIHIHK 180
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA + SG ++ G +E++ R+ + K +G+A+Q+ +DI+DV + E KT G+D
Sbjct: 181 TGALLEACVTSGAVLAGATQEDLSRLSIYAKNIGLAFQIIDDILDVTATTEELGKTAGKD 240
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DKATYPKL G++ SK A ELI A +L + +A L L FIVS N
Sbjct: 241 LSADKATYPKLWGLEESKAKADELIESAIAQLEVYGE-KAQSLKALAEFIVSRKN 294
>gi|113953464|ref|YP_730204.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
gi|113880815|gb|ABI45773.1| geranylgeranyl diphosphate synthase [Synechococcus sp. CC9311]
Length = 312
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/292 (42%), Positives = 188/292 (64%), Gaps = 18/292 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y L ++ ALD ++ P L +AMRYSL GGKRL LC+A+CE++GGS
Sbjct: 21 FDFANYLKLSRDRVEIALDASMGPERPESLRDAMRYSLLAGGKRLRPILCLAACELVGGS 80
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA A+ A
Sbjct: 81 SELAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDAMLSRAF 140
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A + V G+ G+ GQ++D+ SEG+ V L L +IH HKT
Sbjct: 141 EMVAVRSANVPADRLLRVVGELALVSGAPGLVGGQVVDLESEGQAVDLETLEYIHLHKTA 200
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +V+G +IGG N+++++ MR + +G+A+Q+ +DI+DV S E+ KT G+D++
Sbjct: 201 ALLRACVVTGALIGGANDDQLQAMRTYANGIGLAFQIIDDILDVTASSEVLGKTAGKDLL 260
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIVS 290
DK TYPKL+G+D S++ A +L+ E+K A +P R AAPL L +++ S
Sbjct: 261 ADKTTYPKLLGLDASREKALQLVRESK---AALEPWRDKAAPLLALADYVAS 309
>gi|405789932|gb|AFS28709.1| putative geranylgeranyl pyrophosphate synthase, partial [Olea
europaea]
Length = 251
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/252 (48%), Positives = 174/252 (69%), Gaps = 16/252 (6%)
Query: 34 AVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVI 92
AV L P +HE+MRYSL GGKR+ LCIA+CE++GG +S AM ACA+E++ TM+++
Sbjct: 1 AVLLQEPLKIHESMRYSLLAGGKRVRPMLCIAACELVGGEESTAMPSACAVEMIHTMSLM 60
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------- 145
DDLP +DNDDLRRGKP+NHK+FGE +LA AL A +H+A + K + S
Sbjct: 61 HDDLPFMDNDDLRRGKPTNHKIFGEDVTVLAGDALLAYAFEHMA-VATKGVPSERIVRVI 119
Query: 146 -----AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+GSEG+ AGQ++DI SEG +V L L FIH HKT +E S+V G I+GG N+
Sbjct: 120 GELAKCIGSEGLVAGQVVDICSEGNSDVGLDHLEFIHIHKTAALLEGSVVLGAILGGAND 179
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLVGIDGSKKH 258
+E+E++R F + +G+ +Q+ +DI+DV S E+ + G+D++ DK TYPKL+GID SK+
Sbjct: 180 QEVEKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLLADKTTYPKLIGIDKSKEF 239
Query: 259 AKELIAEAKQEL 270
A++L EA+++L
Sbjct: 240 AEKLNREAQEQL 251
>gi|172035793|ref|YP_001802294.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|354555029|ref|ZP_08974332.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
gi|171697247|gb|ACB50228.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. ATCC 51142]
gi|353553183|gb|EHC22576.1| Farnesyltranstransferase [Cyanothece sp. ATCC 51472]
Length = 309
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 191/295 (64%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + + ALD+++P+ P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 17 FDLASYLKEKKQLVEAALDQSLPITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +++ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA AL A
Sbjct: 77 REMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 133 QHIAIIKAKNINSA------------VGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N++ A VG+ G+ GQ++D+ SEG+ +V++ L FIH HK
Sbjct: 137 EYVA-TQTRNVDLANLMDVIARLGRTVGAAGLVGGQVLDLESEGRADVTVDTLKFIHIHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG I+ G E+IER+ + + +G+A+Q+ +DI+DV S E KT G+D
Sbjct: 196 TGALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L G++ S+K A+ LI +A +L+ + + A PL + FIV+ N
Sbjct: 256 QRDQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQS-AQPLTAIAQFIVARKN 309
>gi|124022642|ref|YP_001016949.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962928|gb|ABM77684.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 306
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 189/294 (64%), Gaps = 20/294 (6%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
FF Y A + EALD+++ P L EAMRYSL GGKRL LCIA+CE+ GG
Sbjct: 14 FFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCIAACELAGG 73
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL +
Sbjct: 74 EPTQALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRS 133
Query: 132 MQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ +A +++K + + G+ G+ GQ++D+ EGKEV L L FIH HK
Sbjct: 134 FEMVA-LRSKGVAPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHK 192
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG + A ++ G +IGG ++ I+ +R + + +G+A+Q+ +DI+DV S ++ KT G+D
Sbjct: 193 TGALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKD 252
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVS 290
++ DK TYPKL+G++ S++ A+ L++EAK A DP + AAPL L ++I S
Sbjct: 253 LLADKTTYPKLLGLEESRRRAELLVSEAK---AALDPWQSSAAPLLALADYITS 303
>gi|119509103|ref|ZP_01628254.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
gi|119466269|gb|EAW47155.1| Polyprenyl synthetase [Nodularia spumigena CCY9414]
Length = 309
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/292 (42%), Positives = 189/292 (64%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K ALD+A+P+ +P ++E+MRYSL GGKRL LC+A+CEMIGG+
Sbjct: 16 FNLAAYLQKRKKLCETALDQAIPVIYPEKIYESMRYSLLAGGKRLRPILCLAACEMIGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+G+ AILA L A
Sbjct: 76 ISMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +A +N++ A+G+ G+ GQ++D++SEGK ++SL LNFIH HK
Sbjct: 136 EFVATQTPENVSRERVLQVIARLGKALGAAGLVGGQVVDLDSEGKTDISLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EAS+V G I+ G + E ++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TAALLEASVVCGGIVAGASSENVQRLSRYSQNIGLAFQIIDDILDITATQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ K TYP L GI+ S+ A++L+ A +EL F A PL+ L ++I S
Sbjct: 256 LIAKKVTYPSLWGIEESRSKAQQLVEAACKELETFGQL-AQPLNALAHYITS 306
>gi|297736851|emb|CBI26052.3| unnamed protein product [Vitis vinifera]
Length = 254
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 180/268 (67%), Gaps = 26/268 (9%)
Query: 23 KAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
KAK +N+ALD A+PL P +H+AMRYSL GGKR+ +CI++CE++GG +S AM + C
Sbjct: 4 KAKSVNQALDTAIPLREPLEIHKAMRYSLLDGGKRIHPIVCISACELVGGQESTAMPVVC 63
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
A+E+L ++++QDDLPC+DNDD+RRGKPSNHK FGE+
Sbjct: 64 AVEMLHVVSLMQDDLPCMDNDDIRRGKPSNHKAFGES----------------------- 100
Query: 142 NINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
+ ++GS+G+ AGQ +D++SEG E+ L L IH +K G +EAS V G ++GGG+ E
Sbjct: 101 ELARSIGSQGLVAGQFLDLSSEGSPEIGLEGLESIHINKAGPLLEASAVIGAMLGGGSSE 160
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHA 259
++E +R FG+ VG+ YQ+ +DI+D+ S + KT G+D++ DK TYPKLVGI+ S++ A
Sbjct: 161 QMEILRKFGRCVGLLYQVVDDILDITKSTQELGKTAGKDLVADKVTYPKLVGIEKSREFA 220
Query: 260 KELIAEAKQELAYFDPTRAAPLDHLVNF 287
++L +A L+ FD +AA L +VNF
Sbjct: 221 EKLNGDAWDMLSEFDQEKAASLLAMVNF 248
>gi|186510058|ref|NP_188073.2| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
gi|332642016|gb|AEE75537.1| geranylgeranyl diphosphate synthase 3 [Arabidopsis thaliana]
Length = 360
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/297 (45%), Positives = 196/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHIAIIKAK------------NINSAVGSEGIAAGQIMDINSE---GKEVSLSELNFIHR 177
+H+ + + + A+G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTFVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V GVI+GGG EEEIE++R + + +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++ SK+ A++L EA+++L FDP++AAPL L ++I N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|443328518|ref|ZP_21057114.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
gi|442791817|gb|ELS01308.1| geranylgeranyl pyrophosphate synthase [Xenococcus sp. PCC 7305]
Length = 310
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 188/294 (63%), Gaps = 15/294 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F +N Y + + ALD+++ + P ++E+MRYSL GGKRL LC+A+C +
Sbjct: 15 PTTFDLNSYLKEQKALVETALDQSLAIGIPEKIYESMRYSLLAGGKRLRPILCLATCRLT 74
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GGS +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L
Sbjct: 75 GGSTEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLA 134
Query: 130 LAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHR 177
A +++A IIK + + VG+EG+ GQ++D+ SEGK +++ L+FIH
Sbjct: 135 YAFEYVANKTDNVAPENIIKVIARLGNTVGAEGLVGGQVLDLESEGKTDITAETLSFIHT 194
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTG +E S+V+G I+ G + EEI ++ + + +G+A+Q+ +DI+D+ + E KT G
Sbjct: 195 HKTGALLETSVVTGAILAGASAEEIIKLTKYSQNIGLAFQIIDDILDITATDEQLGKTAG 254
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ KATYP L G++ S+ A++LIAEA +LA + A PL + FIV+
Sbjct: 255 KDLAAQKATYPSLWGLEKSQAEAEKLIAEALDQLASYGEA-AEPLRAIAKFIVT 307
>gi|26450928|dbj|BAC42571.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/297 (45%), Positives = 196/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHIAIIKAK------------NINSAVGSEGIAAGQIMDINSE---GKEVSLSELNFIHR 177
+H+ ++ + + +G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARTIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V GVI+GGG EEEIE++R + + +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++ SK+ A++L EA+++L FDP++AAPL L ++I N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|223997332|ref|XP_002288339.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975447|gb|EED93775.1| geranylgeranyl pyrophosphate synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 339
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 187/296 (63%), Gaps = 17/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
F ++EY A K I AL+ +V +P + E+M YSL GGKR+ LCIA+CEM G
Sbjct: 45 FSLDEYLASKIGPIESALEASVKSRIPQTDKICESMAYSLMAGGKRIRPVLCIAACEMFG 104
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GSQ VAM A A+E++ TM++I DDLP +DNDDLRRGKP+NH VFGE AILA +L
Sbjct: 105 GSQDVAMPTAVALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHVVFGEDVAILAGDSLLST 164
Query: 131 AMQHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRH 178
+ +H+A + A+ I +VG+EG+A GQ+MD+ E K +L +L +IH H
Sbjct: 165 SFEHVARETKGVSAEKIVDVIARLGKSVGAEGLAGGQVMDLECEAKPGTTLDDLKWIHIH 224
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KT ++ ++ SG ++GG EE+ F +G+A+Q+ +DI+DV S E KT G+
Sbjct: 225 KTATLLQVAVASGAVLGGATPEEVAACELFAMNIGLAFQVADDILDVTASSEDLGKTAGK 284
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
D DK TYPKL+G++ SK +A++LI EAK+ LA F RAAPL + +FI+ N
Sbjct: 285 DEATDKTTYPKLLGLEESKAYARQLIDEAKESLAPFG-DRAAPLLAIADFIIDRKN 339
>gi|33240579|ref|NP_875521.1| polyprenyl synthetase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238107|gb|AAQ00174.1| Geranylgeranyl pyrophosphate synthase [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 300
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/291 (44%), Positives = 187/291 (64%), Gaps = 16/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A +I ALD ++ P L EAMRYSL GGKRL LC+A+CE+ G
Sbjct: 9 FDFTAYLAKARTRIESALDASLGPERPNQLREAMRYSLLAGGKRLRPILCLAACELTGSD 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+S A AIE++ TM++I DDLP +DNDDLRRG+P+NHKV+GEA AILA AL A
Sbjct: 69 SENAISTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGEAIAILAGDALLTRAF 128
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A +++ N+ + G+ G+ GQ+ D+ SEGK V L L FIH HKT
Sbjct: 129 EMVA-LRSPNVPKDRLLKVVGELSLVAGAPGLVGGQVEDLESEGKAVDLDTLEFIHIHKT 187
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G ++AS+V G +IGG +E+ + + + K +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 188 GALLKASVVCGALIGGADEDLLIALSTYAKGIGLAFQIVDDILDVTASSEVLGKTAGKDL 247
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ DK+TYPKL+G+D S+K AKELI ++K + + +AAPL L ++I++
Sbjct: 248 LADKSTYPKLLGLDESRKKAKELIRKSKDVIHPWS-DKAAPLLSLADYIIN 297
>gi|88808953|ref|ZP_01124462.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
gi|88786895|gb|EAR18053.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7805]
Length = 315
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y A + ALD A+ P L E+MRYSL GGKRL LC+A+CE++GG
Sbjct: 24 FDFSAYLAKTRNLVEGALDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 83
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 84 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 143
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +++ + + + V G+ G+ GQ++D+ SEG+EV L L +IH HKT
Sbjct: 144 EMVSLRSPGVPPERLLKVVAELALVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 203
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +V+G +IGG + ++E MR + +G+A+Q+ +DI+DV S E+ KT G+D++
Sbjct: 204 ALLRACVVTGALIGGADANQVEAMRTYANGIGLAFQIVDDILDVTASSEVLGKTAGKDLI 263
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G++ S+ A EL+A+AK L + ++A PL L +++ S
Sbjct: 264 ADKTTYPKLLGLEPSRARALELVAQAKSALEPWT-SKAQPLLALADYVAS 312
>gi|317970425|ref|ZP_07971815.1| polyprenyl synthetase [Synechococcus sp. CB0205]
Length = 312
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 185/294 (62%), Gaps = 14/294 (4%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y +Q+ +ALD ++ P L EAMRYSL GGKRL LC+A+CE+
Sbjct: 16 PGHFDFAAYLESSRQQVEQALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELA 75
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG ++AM A A+E++ TM++I DDLP +DNDDLRRG P+NHKV+GEA AILA AL
Sbjct: 76 GGDAALAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLT 135
Query: 130 LAMQHIA----------IIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
A + +A +IK ++ A G+ G+ GQ++D+ EGK+V L L +IH H
Sbjct: 136 RAFEMVALRSPGVPAEQLIKVVGELSLASGAPGLVGGQVVDLECEGKDVDLETLEYIHLH 195
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG + + +++G +I G +E + + + + +G+A+Q+ +DI+DV S E+ KT G+
Sbjct: 196 KTGALLRSCVLTGALIAGASEALLAALTTYARGIGLAFQIIDDILDVTASSEVLGKTAGK 255
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT-RAAPLDHLVNFIVS 290
D+ DK TYPKL+G++ S++ A L+AEAKQ L F+ AAPL L ++I S
Sbjct: 256 DLTADKTTYPKLLGLEESRQRADALVAEAKQALEPFNSNGSAAPLLALADYITS 309
>gi|18146809|dbj|BAB82463.1| geranylgeranyl pyrophosphate synthase [Gentiana lutea]
Length = 367
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 188/292 (64%), Gaps = 16/292 (5%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
+F Y KA ++NEALD+AV + +P ++HEAMRYSL GGKR+ LCIA+CE++GG
Sbjct: 71 YFDFKAYLIEKANKVNEALDQAVSVKNPPMIHEAMRYSLLAGGKRVRPILCIAACELVGG 130
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKP-SNHKVFGEATAILACQALHCL 130
+S ++ ACA+E++ TM++I DDLPC DLRRGK K E A+LA +L
Sbjct: 131 EESNSVPAACAVEMIHTMSLIHDDLPCYGQRDLRRGKAHETTKSSCEDVAVLAGDSLLAF 190
Query: 131 AMQHIAII-----------KAKNINSAVGSEGIAAGQIMD--INSEGKEVSLSELNFIHR 177
+ ++IA +++ I+ ++G+EG+ AGQ+ D IN E + L +L FIH
Sbjct: 191 SFEYIATATKNVSPAKNFSRSRRISKSIGTEGLVAGQVADFVINGENQMFGLDQLEFIHI 250
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA++V G I+GGGN EE+E++R F + +G+ +Q+ +DI+DV S E KT G
Sbjct: 251 HKTAALLEAAVVLGAILGGGNPEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAG 310
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ K TYPKL+G+DG+++ A +L +AK +L+ FD +AAPL L ++I
Sbjct: 311 KRSCGGKTTYPKLMGLDGAREFADKLNKDAKNQLSEFDREKAAPLLALADYI 362
>gi|148239905|ref|YP_001225292.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
gi|147848444|emb|CAK23995.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 7803]
Length = 312
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 186/292 (63%), Gaps = 18/292 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y A + + ++LD A+ P L E+MRYSL GGKRL LC+A+CE++GG
Sbjct: 21 FDFSSYLAKTRELVEQSLDAALGPERPESLRESMRYSLLAGGKRLRPILCLAACELVGGD 80
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 81 ASLAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAMAILAGDALLSRAF 140
Query: 133 QHIAIIK-----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ ++ G+ G+ GQ++D+ SEG+EV L L +IH HKT
Sbjct: 141 EMVAVRSEGVPPERLLKVVAELSLVSGAPGLVGGQVVDLESEGREVDLETLEYIHLHKTA 200
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +V+G +IGG + +++ MR + +G+A+Q+ +DI+DV S ++ KT G+D++
Sbjct: 201 ALLRACVVTGALIGGADASQVDAMRTYANGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 260
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVS 290
DK TYPKL+G++ S+ A EL+A+AK A +P +A PL L +++ S
Sbjct: 261 ADKTTYPKLLGLEPSRARALELVAQAK---AVLEPWKDKAQPLLALADYVAS 309
>gi|282901609|ref|ZP_06309527.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
gi|281193485|gb|EFA68464.1| Polyprenyl synthetase [Cylindrospermopsis raciborskii CS-505]
Length = 309
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 188/295 (63%), Gaps = 16/295 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + Y + + + ALD+++PL +P ++EAMRYSL GGKR+ LC+A+CEMI
Sbjct: 13 PARFNLYAYLGERQQLCDAALDKSIPLVYPETIYEAMRYSLLAGGKRVRPILCLATCEMI 72
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L
Sbjct: 73 GGTIEMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLA 132
Query: 130 LAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIH 176
L+ Q +A + + SA G+ G+ GQ++D+ SEG+ +SL LNFIH
Sbjct: 133 LSFQLVATQTPQTVPPERTLRVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIH 192
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
HKT +EAS+V G II G ++I+++ + + +G+A+Q+ +DI+D+ + E KT
Sbjct: 193 NHKTAALLEASVVCGGIIAGAAPQDIQKLTRYSQNIGLAFQIIDDILDITATKEQLGKTA 252
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
G+D+ K TYP L GI+ S+ A+EL+ EA +L ++ +A PL + +FI++
Sbjct: 253 GKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDFYG-DKAVPLQEIAHFIIN 306
>gi|414076496|ref|YP_006995814.1| geranyltranstransferase [Anabaena sp. 90]
gi|413969912|gb|AFW94001.1| geranyltranstransferase [Anabaena sp. 90]
Length = 312
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 188/295 (63%), Gaps = 16/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + +ALD ++ + +P ++EAMRYSL GGKR+ LC+A+ +MIGG+
Sbjct: 19 FNLATYLKQRQQLCEQALDNSITVVYPEKIYEAMRYSLLAGGKRVRPILCLATADMIGGT 78
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L LA
Sbjct: 79 IEMAMATACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLALAF 138
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+H+A N+ A+G+ G+ GQ++D+ SEGK ++SL LNFIH HK
Sbjct: 139 EHVAAQTPTNVPRDRVLQVIIRLGKALGAAGLVGGQVVDLESEGKSDISLETLNFIHNHK 198
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +V G II G + E+++++ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 199 TAALLEACVVCGGIIAGASAEDVQKLTRYSQNIGLAFQIIDDILDITATQEQLGKTAGKD 258
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYP L GI+ S+ A+ L+A+A ELA + +A PL L +FI++ N
Sbjct: 259 LTAQKVTYPSLWGIEESRAKAQHLVAQACAELASYGE-KAIPLQALAHFIINRNN 312
>gi|254409375|ref|ZP_05023156.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183372|gb|EDX78355.1| polyprenyl synthetase superfamily [Coleofasciculus chthonoplastes
PCC 7420]
Length = 309
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 185/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + Q+ ALD ++PL +P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 17 FDLSTYLKERKAQVEAALDRSLPLGYPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E+L TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 77 MEMAMPTACALEMLHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDMAILAGDGLLAYAF 136
Query: 133 QHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A + A+ + VG+ G+ GQ++D+ SEGK ++ L++IH HKT
Sbjct: 137 EYVATQTQGVPAERVLQVIARLGRTVGAAGLVGGQVVDLESEGKSDIQEETLHYIHTHKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E +V G I+ G + +IER+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 197 GALLETCVVCGGILAGATDADIERLSRYAQNIGLAFQIIDDILDITATQEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP L G++ SK A+ELI EA +L F R+ PL L NFI +
Sbjct: 257 QAQKATYPSLWGLEASKAKAQELIEEAIAQLEPFG-ERSQPLIALANFITA 306
>gi|428224789|ref|YP_007108886.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
gi|427984690|gb|AFY65834.1| farnesyl-diphosphate synthase [Geitlerinema sp. PCC 7407]
Length = 315
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 187/292 (64%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + Q+ ALD +VP+ +P ++EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 23 FDLKAYLTARQVQVEAALDASVPMSYPETVYEAMRYSLLAGGKRLRPILCLATCELAGGT 82
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L +
Sbjct: 83 SEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAYSF 142
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
++IA + +N+ + AVG+ G+ GQ++D+ SEG+ +VS+ LN+IH HK
Sbjct: 143 EYIA-SQTRNVPAERVLQVVTQVARAVGAAGLVGGQVVDLESEGRSDVSIETLNYIHTHK 201
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRD 238
T +EAS+VSG ++ G + E + + + + +G+A+Q+ +DI+D+ + E+ + G+D
Sbjct: 202 TAALLEASVVSGAVLAGASAELQQSLSRYAQNIGLAFQIVDDILDITATQEELGKSVGKD 261
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYP L GI+ S++ A +LI AK EL +P A PL + ++IV+
Sbjct: 262 LQAQKVTYPSLWGIEESQRQAAQLIESAKAELDATNPN-AQPLLAIADYIVA 312
>gi|434403680|ref|YP_007146565.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
gi|428257935|gb|AFZ23885.1| geranylgeranyl pyrophosphate synthase [Cylindrospermum stagnale PCC
7417]
Length = 309
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 191/297 (64%), Gaps = 18/297 (6%)
Query: 11 PKFFQVNEYKALKAKQ--INEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCE 67
P+ ++N LK +Q N ALD+++P+ +P ++E+MRYSL GGKR+ LC+A+CE
Sbjct: 11 PEEAKLNLAAYLKERQKLCNTALDQSIPVVYPEKIYESMRYSLLAGGKRIRPILCLAACE 70
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
M+GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L
Sbjct: 71 MMGGTIDMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGENIAILAGDGL 130
Query: 128 HCLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNF 174
LA + A N+ A+G+ G+ GQ++D++SEGK ++SL LNF
Sbjct: 131 LALAFEFPATQTPANVPHERVLQVIARLGKALGAAGLVGGQVVDLDSEGKLDISLETLNF 190
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK 234
IH HKT +EAS+V G ++ G + E+I+R+ + + +G+A+Q+ +DI+D+ + E K
Sbjct: 191 IHNHKTAALLEASVVCGGLLAGASSEDIQRLTRYAQSIGLAFQIIDDILDITATLEQLGK 250
Query: 235 T-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
T G+D+ K TYP L GI+ S+ A +L+ A ELA F +A PL + ++IVS
Sbjct: 251 TAGKDLTAKKVTYPSLWGIEESRSKATQLVEAACAELAPFG-EKALPLQAIAHYIVS 306
>gi|148241850|ref|YP_001227007.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
gi|147850160|emb|CAK27654.1| Geranylgeranyl pyrophosphate synthase [Synechococcus sp. RCC307]
Length = 300
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y ++ +ALD ++ P L EAMRYSL GGKRL LC+ASCE+ GG
Sbjct: 9 FDFSHYLEAGRLKVEQALDSSLGPERPESLREAMRYSLLAGGKRLRPILCLASCELAGGD 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+ATAILA AL A
Sbjct: 69 ASLALPTATALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDATAILAGDALLTRAF 128
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ ++ A G+ G+ GQI+D+ SEG EV L L +IH HKTG
Sbjct: 129 EMVALRSPDVPAERLLKVIGELSLAAGAPGLVGGQIVDLASEGVEVDLDTLEYIHLHKTG 188
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
++AS++SG +I G ++ +E +R + + +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 189 ALLQASVLSGALIAGADDTLLEALRTYSRAIGLAFQIIDDILDVTASSEVLGKTAGKDLT 248
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G++ SK A+ L+ EA L + +A PL L +I S
Sbjct: 249 ADKTTYPKLLGLEESKARAESLVKEACGVLNPWS-DKAQPLLALAGYITS 297
>gi|119489387|ref|ZP_01622167.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
gi|119454660|gb|EAW35806.1| Polyprenyl synthetase [Lyngbya sp. PCC 8106]
Length = 287
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/287 (42%), Positives = 183/287 (63%), Gaps = 15/287 (5%)
Query: 21 ALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
A + ++ +ALD ++ + +P ++EAMRYSL GGKRL LC+A+CE+ GG+ +AM
Sbjct: 2 AERKAEVEQALDRSIAVIYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGTMEMAMPT 61
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK 139
AC++E++ TM++I DDLP +DNDD RRG+ +NHKV+GE AILA L A + +A
Sbjct: 62 ACSLEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDGLLSYAFEFVATQT 121
Query: 140 AK-----------NINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEAS 187
++ AVG+ G+ GQ++D+ SEGK +++ +L FIH HKTG +EA
Sbjct: 122 TNVPPQQVLDVIGHLGRAVGAAGLVGGQVVDVESEGKTDITEEQLTFIHTHKTGALLEAC 181
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATY 246
+VSG I+ G + E ER+ + + +G+A+Q+ +DI+D+ + E KT G+D+ KATY
Sbjct: 182 VVSGAILAGTSTENRERLSRYAQKIGLAFQIVDDILDITATQEELGKTAGKDLTAQKATY 241
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
P L G++ SK+ A +LIAEA+ ELA F A PL L FI S N
Sbjct: 242 PSLWGLEESKRRANQLIAEAQAELAPFGEA-ATPLVALAQFITSRSN 287
>gi|428305626|ref|YP_007142451.1| polyprenyl synthetase [Crinalium epipsammum PCC 9333]
gi|428247161|gb|AFZ12941.1| Polyprenyl synthetase [Crinalium epipsammum PCC 9333]
Length = 312
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 194/304 (63%), Gaps = 18/304 (5%)
Query: 1 IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMS 59
II +Q N F ++ Y A Q+ ALD ++P+ +P ++EAMRYSL GGKRL
Sbjct: 10 IITNQAN---LAAFDLSSYLAQIQPQVEAALDNSLPVVYPEKIYEAMRYSLLAGGKRLRP 66
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
LC+A+CEM+GG+ ++AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE
Sbjct: 67 ILCLATCEMLGGTTAMAMPTACALEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDI 126
Query: 120 AILACQALHCLAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EV 167
AILA L + ++IA +++ ++ AVG+ G+ GQ++D+ EGK +
Sbjct: 127 AILAGDGLLAYSFEYIAKATQGVPAEQVLQVIAQLSHAVGATGLVGGQVVDLECEGKSDT 186
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG 227
S+ L +IH HKTG +E+ +V G I+ + E ++++ + + +G+A+Q+ +DI+D+
Sbjct: 187 SVETLTYIHTHKTGALLESCVVCGAILASASAEVLQKLSRYAQNIGLAFQIVDDILDITA 246
Query: 228 SPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
+ E KT G+D+ KATYP + G+D S++ A++L+ EAK ELA F + PL + +
Sbjct: 247 TQEELGKTAGKDLQAQKATYPSIWGLDQSRRQAQKLVDEAKAELASFGE-KGRPLMAIAD 305
Query: 287 FIVS 290
FI S
Sbjct: 306 FITS 309
>gi|5631295|dbj|BAA82613.1| geranylgeranyl diphosphate synthase (SelGGPS) [Synechococcus
elongatus]
Length = 307
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 190/292 (65%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F V Y + + AL+ ++P+ +P +++AMRYSL GGKRL LC+A+CE++GG+
Sbjct: 15 FDVKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGT 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA L A
Sbjct: 75 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAF 134
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++ + + KN+ + AV + G+ GQ++D+ EG+ ++ L L+FIH HK
Sbjct: 135 EYV-VEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHK 193
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EAS+VSG ++ G +E ++ R+ + +G+A+Q+ +DI+D+ + ++ KT G+D
Sbjct: 194 TGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKD 253
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYP+L G++ S++ A+ L+AEAK ELA + A PL + ++I S
Sbjct: 254 VAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITS 304
>gi|282895575|ref|ZP_06303709.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
gi|281199415|gb|EFA74279.1| Polyprenyl synthetase [Raphidiopsis brookii D9]
Length = 309
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 189/295 (64%), Gaps = 16/295 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + Y + + + ALD+++PL +P ++EAMRYSL GGKR+ LC+A+CEMI
Sbjct: 13 PAQFNLYAYLGERQQLCDAALDKSIPLVYPEKIYEAMRYSLLAGGKRVRPILCLATCEMI 72
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L
Sbjct: 73 GGTIGMAMPTACAMEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLA 132
Query: 130 LAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIH 176
L+ + +A + + SA G+ G+ GQ++D+ SEG+ +SL LNFIH
Sbjct: 133 LSFEFVATQTPQTVPPDRTLQVIARMGSASGAPGLVGGQVVDLASEGQSNISLETLNFIH 192
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
HKT +EAS+V G II G + ++I+++ + + +G+A+Q+ +DI+D+ + E KT
Sbjct: 193 NHKTAALLEASVVCGGIIAGASPQDIQKLTCYSQNIGLAFQIIDDILDITATKEQLGKTA 252
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
G+D+ K TYP L GI+ S+ A+EL+ EA +L ++ +A PL + +FI++
Sbjct: 253 GKDIESAKVTYPSLWGIEESRLKAQELVEEACAQLDFYG-DKAVPLQEIAHFIIN 306
>gi|409993924|ref|ZP_11277049.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
gi|291568862|dbj|BAI91134.1| geranylgeranyl pyrophosphate synthase [Arthrospira platensis
NIES-39]
gi|409935211|gb|EKN76750.1| farnesyl-diphosphate synthase [Arthrospira platensis str. Paraca]
Length = 316
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 176/274 (64%), Gaps = 14/274 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + K + + ALD A+ + +P ++E+MRYSL GGKRL TLC+A+CE++GG+
Sbjct: 24 FDLSTYLSQKKELVEAALDAAITVTYPEKIYESMRYSLMAGGKRLRPTLCLATCELLGGT 83
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA L A
Sbjct: 84 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLSYAF 143
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+ +A + AVG+ G+ GQ++DI SEG +VS L FIH HKT
Sbjct: 144 EFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDIASEGLSDVSEETLTFIHTHKT 203
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EA +V G I+ G NE ++ER+ + K +G+A+Q+ +DI+D+ E KT G+D+
Sbjct: 204 GALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITAPSEQLGKTAGKDL 263
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
KATYP L G++ S+ A++L+ EAK ELA F
Sbjct: 264 EAQKATYPSLWGLEKSRAKAEQLVEEAKAELAAF 297
>gi|297834334|ref|XP_002885049.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
gi|297330889|gb|EFH61308.1| hypothetical protein ARALYDRAFT_478873 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 197/305 (64%), Gaps = 17/305 (5%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
++D F Y KAK +N ALD +VPL P + EA+RYSL GGKR+ LCIA
Sbjct: 56 KSDDRNSAFDFKSYMINKAKSVNAALDISVPLREPLTVQEAVRYSLLAGGKRVRPMLCIA 115
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
SCE++GG+++ AM ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKVFGE A+LA
Sbjct: 116 SCELVGGNEATAMPAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAG 175
Query: 125 QALHCLAMQHIAIIKA------------KNINSAVGSEGIAAGQIMDINSE---GKEVSL 169
AL LA +H+ ++ + + A+G+ G+ AGQ++D+ SE + L
Sbjct: 176 DALLALAFEHMTVVSSGLVPPERMIRAVAELARAIGTTGLVAGQMIDLASERLNPHDAGL 235
Query: 170 SELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP 229
L FIH HKT +EA+ V GVI+GGG EEEIE++R + + +G+ +Q+ +DI+DV S
Sbjct: 236 ERLEFIHLHKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTEST 295
Query: 230 EMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
E KT G+D+M K TYP+L+G++ S++ A++L EA++++ FD +APL L ++I
Sbjct: 296 EELGKTAGKDLMAGKLTYPRLIGLERSREVAEKLRKEAEEQVLGFDSENSAPLVALASYI 355
Query: 289 VSFGN 293
N
Sbjct: 356 ACRHN 360
>gi|56750769|ref|YP_171470.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81299587|ref|YP_399795.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
gi|56685728|dbj|BAD78950.1| geranylgeranyl pyrophosphate synthase [Synechococcus elongatus PCC
6301]
gi|81168468|gb|ABB56808.1| farnesyl-diphosphate synthase [Synechococcus elongatus PCC 7942]
Length = 301
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/266 (43%), Positives = 179/266 (67%), Gaps = 14/266 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGS 72
F + Y + +Q+ AL+ +P P +++E+MRYSL GKRL LC+ASCE+ GG+
Sbjct: 9 FDLKSYLKERQRQVEAALNAILPPQDPPLIYESMRYSLLAEGKRLRPILCLASCELAGGT 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++A+ ACA+E++ TM++I DDLP +DNDD RRG+P+NHKV+GE AILA AL A
Sbjct: 69 AAIALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAF 128
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ IA ++K + AVG+EG+ GQ++D+ SEG+ +V+L L++IH HKT
Sbjct: 129 EAIARHTPEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKT 188
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG I+ G +EE E++R + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 189 GALLEVSVVSGAILAGASEELQEQLRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDL 248
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAE 265
KATYP L+G+D S+++A +LI E
Sbjct: 249 AAKKATYPSLLGLDASREYADQLITE 274
>gi|427717935|ref|YP_007065929.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
gi|427350371|gb|AFY33095.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 7507]
Length = 309
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 184/292 (63%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + K ALD+A+P+ +P ++E+MRYSL GGKR+ LC+A+CEM GG+
Sbjct: 16 FNLSAYLKERQKLCETALDQAIPIIYPEKIYESMRYSLLAGGKRVRPILCLATCEMTGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 IDMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDVAILAGDGLLAFAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +A +++ A+G+ G+ GQ++D+ SEGK + SL LNFIH HK
Sbjct: 136 EFVAKQTPQDVPRDRVLDVVARLGRALGAAGLVGGQVVDLESEGKSDTSLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EAS+V G I+ G + E+++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TAALLEASVVCGGILTGASSEDVQRLTRYAQNIGLAFQIVDDILDITATQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYP L GI+ S+ A+EL+ EA EL F + A PL + +I S
Sbjct: 256 LKAQKVTYPSLWGIEESRAKAQELVEEACVELESFGES-AQPLKAIAYYITS 306
>gi|427724764|ref|YP_007072041.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
gi|427356484|gb|AFY39207.1| farnesyl-diphosphate synthase [Leptolyngbya sp. PCC 7376]
Length = 301
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 184/299 (61%), Gaps = 14/299 (4%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
D + F + Y K + ALD+++ P ++EAMRYSL GGKRL LC+A+C
Sbjct: 4 DAKAQGFSLERYLKEKKAIVETALDQSIVTAEPVTVYEAMRYSLLAGGKRLRPILCLAAC 63
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
M+GG+ +AM+ ACA+E++ TM++I DDLP +DNDDLRRGKP+NHKV+GE AILA
Sbjct: 64 NMLGGTTEMAMNTACALEMIHTMSLIHDDLPSMDNDDLRRGKPTNHKVYGEDIAILAGDG 123
Query: 127 LHCLAMQHIAIIKAK----------NINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFI 175
L A +++A + + AVG+EG+ GQ++D+ SEGK +VS+ LNFI
Sbjct: 124 LLSYAFEYVARTQGVPADRLLQVVIRLGQAVGAEGLVGGQVVDLQSEGKTDVSIETLNFI 183
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT 235
H HKTG +E + SG I+ G +I++++ + + +G+ +Q+ +DI+D+ + E KT
Sbjct: 184 HTHKTGALLEVCVTSGAILAGAENAKIQKLQKYAQNIGLTFQIIDDILDITATQEELGKT 243
Query: 236 -GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D+ K TYP L G++ S+ A+ L EA L + + AAPL L +I++ N
Sbjct: 244 AGKDLDAQKVTYPSLWGLEKSRSEAQRLTDEAIASLEDYGAS-AAPLKALAEYIINRKN 301
>gi|218437608|ref|YP_002375937.1| polyprenyl synthetase [Cyanothece sp. PCC 7424]
gi|218170336|gb|ACK69069.1| Polyprenyl synthetase [Cyanothece sp. PCC 7424]
Length = 307
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 187/292 (64%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + +++AL+ ++P+ P ++EAMRYSL GGKRL LC+A+C+++GG+
Sbjct: 15 FDLTSYLKHQKDLVDQALESSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCDLMGGT 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 75 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAF 134
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N+ VG+ G+ GQ++D+ SEGK +++ L FIH HK
Sbjct: 135 EYVA-TQTRNVPPEQILEVIARLGRTVGAAGLVGGQVLDLESEGKSDITPETLTFIHTHK 193
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRD 238
TG +E S+VSG I+ G EE+E++ + + +G+A+Q+ +DI+D+ + E+ + G+D
Sbjct: 194 TGALLETSVVSGAILAGATREEVEKLSRYAQNIGLAFQIVDDILDITATQEELGKSIGKD 253
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ KATYP L GI+ SK A++L+ EA +LA + +A PL + FIV+
Sbjct: 254 VQAQKATYPSLWGIEESKVQAQKLVDEAIAQLAPYSE-KAEPLRAIAQFIVT 304
>gi|218245046|ref|YP_002370417.1| polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|257058070|ref|YP_003135958.1| polyprenyl synthetase [Cyanothece sp. PCC 8802]
gi|218165524|gb|ACK64261.1| Polyprenyl synthetase [Cyanothece sp. PCC 8801]
gi|256588236|gb|ACU99122.1| Polyprenyl synthetase [Cyanothece sp. PCC 8802]
Length = 309
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 186/295 (63%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + + ALD ++ + P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 17 FDLASYLKDKQQLVEAALDRSLAITRPETIYEAMRYSLLAGGKRLRPILCLTTCELLGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHK +GE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKYGEDIAILAGDGLLAYAF 136
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
++ A + +N++ VG G+ GQ++D+ SEGK ++++ L FIH HK
Sbjct: 137 EY-AATQTRNVDPHNLINVLGRLGRTVGPAGLVGGQVLDLESEGKPDITVDTLKFIHTHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG I+ GG+ E+I+R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TGALLETSVVSGAILAGGSTEDIQRLSQYAQNIGLAFQIIDDILDITSTQEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L G++ SKK A+ L++ A +L + +A PL + NFIV+ N
Sbjct: 256 LRDQKATYPSLWGLEESKKQAQNLVSGAIAQLTPYG-NKAEPLRAIANFIVTRNN 309
>gi|22297564|ref|NP_680811.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
gi|22293741|dbj|BAC07573.1| geranylgeranyl pyrophosphate synthase [Thermosynechococcus
elongatus BP-1]
Length = 307
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 190/292 (65%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + AL+ ++P+ +P +++AMRYSL GGKRL LC+A+CE++GG+
Sbjct: 15 FDLKAYLKERQALVEAALEASIPVAYPEKIYDAMRYSLMAGGKRLRPILCLATCELMGGT 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA L A
Sbjct: 75 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKPTNHKVYGEDIAILAGDGLLAYAF 134
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++ + + KN+ + AV + G+ GQ++D+ EG+ ++ L L+FIH HK
Sbjct: 135 EYV-VEQTKNVPAEYLLKIVARLGHAVAATGLVGGQVVDLECEGQPDIGLETLHFIHSHK 193
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EAS+VSG ++ G +E ++ R+ + +G+A+Q+ +DI+D+ + ++ KT G+D
Sbjct: 194 TGALLEASVVSGALLTGAHESDVARLSRYAANIGLAFQIVDDILDITSTRDVLGKTVGKD 253
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYP+L G++ S++ A+ L+AEAK ELA + A PL + ++I S
Sbjct: 254 VAAQKMTYPRLWGLEKSRQEAERLVAEAKAELAVYGAA-AVPLQAIADYITS 304
>gi|427737891|ref|YP_007057435.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
gi|427372932|gb|AFY56888.1| geranylgeranyl pyrophosphate synthase [Rivularia sp. PCC 7116]
Length = 311
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 191/308 (62%), Gaps = 19/308 (6%)
Query: 3 NSQRNDTLPKF--FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMS 59
N +N+T K F ++ Y + K + ALD ++ + +P ++EAMRYSL GGKRL
Sbjct: 6 NLTKNETESKQSKFDLSVYLKERQKLVETALDNSIAVVYPEKIYEAMRYSLLAGGKRLRP 65
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
LC+A+CEM GG+ +AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+
Sbjct: 66 ILCLATCEMTGGNTEIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDV 125
Query: 120 AILACQALHCLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-E 166
AILA L A +++A KN+ AVG+ G+ GQ++D+ EGK +
Sbjct: 126 AILAGDGLLAYAFEYVA-TNTKNVPPTQILQVISRLGRAVGAAGLVGGQVVDLEMEGKTD 184
Query: 167 VSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI 226
VSL LNFIH HKT +EAS+V G I+ G + E+I++++ + + +G+A+Q+ +DI+D+
Sbjct: 185 VSLETLNFIHNHKTAALLEASVVCGGILSGTSPEDIQKLQRYSQNIGLAFQIVDDILDIT 244
Query: 227 GSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLV 285
+ E KT G+D+ K TYP L G++ SKK A+ L+ A EL F +A PL L
Sbjct: 245 ATQEQLGKTAGKDLEAQKVTYPSLWGLEESKKQAQLLVEAACAELEPFGE-QAKPLVALA 303
Query: 286 NFIVSFGN 293
FI S N
Sbjct: 304 YFITSRSN 311
>gi|159903660|ref|YP_001551004.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888836|gb|ABX09050.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 300
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y A + ++ ALD ++ P L EAMRYSL GGKRL LC+A+CE+I G
Sbjct: 9 FDFAAYLAKEKIRVEAALDASLGPERPKQLREAMRYSLLAGGKRLRPILCLAACELIAGE 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A AIE++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 69 SETALPTAVAIEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDALAILAGDALLTRAF 128
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +++ I A+ + V G+ G+ GQ+ D+ EGK+V + L +IH HKTG
Sbjct: 129 EMVSLRSPGISAERLIKVVGELSLVAGAPGLVGGQVADLECEGKDVDIDTLEYIHIHKTG 188
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
++AS+V G +IGG ++ ++ +R + + +G+A+Q+ +DI+DV S E+ KT G+D++
Sbjct: 189 ALLKASVVCGALIGGAKDDLLDALRTYAEAIGLAFQIIDDILDVTSSSEVLGKTAGKDLI 248
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G+D S++ AK LI +AK L ++ A PL L ++I+S
Sbjct: 249 ADKTTYPKLLGVDESRQRAKVLIEKAKSVLEPWEDD-ATPLLALADYIIS 297
>gi|428203147|ref|YP_007081736.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
gi|427980579|gb|AFY78179.1| geranylgeranyl pyrophosphate synthase [Pleurocapsa sp. PCC 7327]
Length = 309
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 187/292 (64%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + + AL+ ++ + P ++EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 17 FDLASYLEEKKQLVEAALERSLSIGKPEKIYEAMRYSLLAGGKRLRPILCLATCELTGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 TEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N+ VG+ G+ GQ++D+ SEGK ++S+ L FIH HK
Sbjct: 137 EYVA-AQTQNVPPQRILDVIARLGRTVGAAGLVGGQVLDLESEGKSDISVDTLTFIHTHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG ++ G +++EI+R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TGALLETSVVSGAMLAGASDDEIQRLSKYAQDIGLAFQIVDDILDITATQEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ KATYP L G++ S+K A++L+ A ELA + A PL + ++IV+
Sbjct: 256 LQAQKATYPSLWGLEESRKQAQQLVDAAIAELASYGEG-AEPLRAIASYIVT 306
>gi|434391876|ref|YP_007126823.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
gi|428263717|gb|AFZ29663.1| farnesyl-diphosphate synthase [Gloeocapsa sp. PCC 7428]
Length = 308
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 184/292 (63%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + Q+ ALD A+P+ +P ++EAMRYSL GGKRL LC+A+CE+ GG+
Sbjct: 16 FDLPAYLQQRQSQVEAALDRAIPIAYPEKIYEAMRYSLLAGGKRLRPILCLATCELAGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRG +NHKV+GE AILA L A
Sbjct: 76 TEMAIPTACALEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A K +N+ + AVG+ G+ GQ++D+ SEGK +VS+ LNFIH HK
Sbjct: 136 EYVA-AKTENVPAPRVLQVISRLGRAVGAAGLVGGQVVDLESEGKADVSIDTLNFIHNHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA + G I+ G E +++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 195 TAALLEACVACGAILAGAPEADLQRLTRYAQNIGLAFQIVDDILDITATQEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ KATYP + G++ S++ A++LI A EL F +A PL + FI S
Sbjct: 255 LQAQKATYPSIWGLEESQRQARQLIQAAIAELDSFG-EKALPLQAIAEFITS 305
>gi|72382520|ref|YP_291875.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002370|gb|AAZ58172.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. NATL2A]
Length = 299
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 186/291 (63%), Gaps = 16/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY ++ +ALD ++ P L E+MRYSL GGKRL LC+A+CE+ GG
Sbjct: 8 FDFAEYLEKARTRVEDALDASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGE 67
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 68 LEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAF 127
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ ++ I+ + I S A G+ G+ GQ++D++ EGKEV L L +IH HKT
Sbjct: 128 EMVS-IRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G ++A + G +IGG +E+ +E + + + +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 187 GALLKACVTCGALIGGADEKLLEALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDL 246
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ DK TYPKL+G+D S++ A L+A+AK L + P ++ PL L ++I S
Sbjct: 247 IADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITS 296
>gi|220906408|ref|YP_002481719.1| polyprenyl synthetase [Cyanothece sp. PCC 7425]
gi|219863019|gb|ACL43358.1| Polyprenyl synthetase [Cyanothece sp. PCC 7425]
Length = 320
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 189/291 (64%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + ++ AL++++ + +P +++AMRYSL GGKRL LC+A+CEM GG+
Sbjct: 28 FDLVSYLKERQQWVDAALEQSISVTYPEKIYQAMRYSLMAGGKRLRPILCLATCEMTGGT 87
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 88 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 147
Query: 133 QHIAI----IKAK-------NINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+++A+ + A+ + AV + G+ GQ++D+ EG K+VS+ LNFIH HKT
Sbjct: 148 EYVAVKTQGVPAEWLLKVVARLGHAVAATGLVGGQVVDLECEGVKDVSVETLNFIHAHKT 207
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS++ G + G ++E ++++ + + VG+A+Q+ +D++D+ + E KT G+D+
Sbjct: 208 GALLEASVLCGAYLTGASDEVLQKLSRYARNVGLAFQIIDDVLDITATQEELGKTAGKDL 267
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L GI+ S+ AK+L+ EAK ELA F RA PL + +F+ +
Sbjct: 268 RAQKVTYPSLWGIEASRCQAKQLVDEAKAELATFG-ERAIPLMAIADFVTA 317
>gi|390440821|ref|ZP_10229021.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
gi|389835867|emb|CCI33147.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis sp.
T1-4]
Length = 309
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 187/297 (62%), Gaps = 17/297 (5%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
K F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++G
Sbjct: 15 KNFSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMG 74
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GS +A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L
Sbjct: 75 GSLEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAY 134
Query: 131 AMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHR 177
A +++A + +N+ VG+ G+ GQ++D+ S GK ++S L FIH
Sbjct: 135 AFEYVA-TQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHT 193
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTG +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G
Sbjct: 194 HKTGSLLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATNEELGKTAG 253
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+ KATYP L GI+GS++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 254 KDLQAQKATYPSLWGIEGSRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|443311531|ref|ZP_21041158.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
gi|442778410|gb|ELR88676.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 7509]
Length = 308
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 183/291 (62%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + ALD A+ + +P ++EAMRYSL GGKRL LC+A+C+M GG+
Sbjct: 16 FNLSAYLLEHQSLVEAALDRAISVVYPEKIYEAMRYSLLAGGKRLRPILCLATCQMAGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 LETAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ +A ++K + AVG+ G+ GQ++D+ SEGK +VSL LNFIH HKT
Sbjct: 136 EFVATNTFNVPAEQVLKVIAKLGRAVGAAGLVGGQVVDLESEGKTDVSLETLNFIHNHKT 195
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EAS+V G I+ G +EE+++R+ F + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 196 AALLEASVVCGGILAGMSEEDLQRLSGFSQNIGLAFQIIDDVLDITSTQEQLGKTAGKDL 255
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L GI+ S A++LIA A +L F +A PL + ++I S
Sbjct: 256 QAQKVTYPSLWGIEESLHQARQLIAAAIAQLEPFGD-KATPLKAIAHYITS 305
>gi|428777168|ref|YP_007168955.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
gi|428691447|gb|AFZ44741.1| farnesyl-diphosphate synthase [Halothece sp. PCC 7418]
Length = 307
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 179/274 (65%), Gaps = 14/274 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + + +ALD+++ + P ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 15 FDLDSYLQARKAIVEKALDQSLRVGEPPQIYEAMRYSLLAGGKRLRPILCLATCELVGGS 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHK FGE AILA L A
Sbjct: 75 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKKFGEDIAILAGDGLLAYAF 134
Query: 133 QHI----------AIIK-AKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
++I A++K + AVG+ G+ GQ++D+ SEG +++L LN+IH HKT
Sbjct: 135 EYIATYTQGVEPAAVLKVVSKLGHAVGATGLVGGQVVDLASEGNPDINLETLNYIHTHKT 194
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EA +VSG I+GG EE++ R+ + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 195 GALLEACVVSGAILGGATEEDLGRLSRYAYDIGLAFQIVDDILDITATQEELGKTAGKDL 254
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
DKATYP+L+G++ SK A EL A ELA +
Sbjct: 255 EADKATYPRLLGLEASKAKADELTEAACAELASY 288
>gi|11467424|ref|NP_043281.1| prenyl transferase CrtE [Cyanophora paradoxa]
gi|1345836|sp|P48368.1|CRTE_CYAPA RecName: Full=Geranylgeranyl pyrophosphate synthase homolog;
Short=GGPP synthase; AltName:
Full=Farnesyltranstransferase
gi|1016225|gb|AAA81312.1| CrtE [Cyanophora paradoxa]
Length = 300
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 192/295 (65%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGS 72
F + Y + + + + L++++P +P +++++RYSL GGKR+ LC+ASCE+ GG+
Sbjct: 8 FNLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCLASCELAGGT 67
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DND RRGKP+NH ++GE AILA AL A
Sbjct: 68 MEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGDALLAYAF 127
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ IA + KN+ + +V + G+ GQI+D++SEGK + +L LNFIH HK
Sbjct: 128 EFIA-TQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLNFIHIHK 186
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA+++SG ++ G E+++ R + + +G+A+Q+ +D++D+I + E K+ G+D
Sbjct: 187 TGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLGKSIGKD 246
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP G++ S K A+ L+ EAK+E+ YFD +A PL + +FIV+ N
Sbjct: 247 LKTQKATYPSFWGVEESIKQAELLVEEAKEEILYFD-NKAIPLIAIADFIVNRNN 300
>gi|15231869|ref|NP_188069.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|332642012|gb|AEE75533.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 284
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/272 (45%), Positives = 186/272 (68%), Gaps = 17/272 (6%)
Query: 34 AVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVI 92
+VPL P + EA+RYSL GGKR+ LCIA CE++GG ++ AMS ACA+E++ T ++I
Sbjct: 8 SVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLI 67
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------- 145
DDLPC+DN DLRRGKP+NHKVFGE A+LA AL LA +H+ ++ + + S
Sbjct: 68 HDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAV 127
Query: 146 -----AVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG 197
A+G++G+ AGQ++D++SE +V L L FIH HKT +EA+ V G I+GGG
Sbjct: 128 VELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGG 187
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
EEEIE++R + + +G+ +Q+ +DI+DV S E KT G+D+M K TYP+L+G++ S+
Sbjct: 188 TEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSR 247
Query: 257 KHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ A++L EA+++L F+ +AAPL L ++I
Sbjct: 248 EVAEKLSREAEEQLLGFESDKAAPLVALASYI 279
>gi|284928678|ref|YP_003421200.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
gi|284809137|gb|ADB94842.1| farnesyl-diphosphate synthase [cyanobacterium UCYN-A]
Length = 309
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 187/295 (63%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + + ALD ++P+ P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 17 FDLVSYLKEKKQLVEAALDASIPITCPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+GE AILA AL A
Sbjct: 77 VEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKVYGEDIAILAGDALLSYAF 136
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGKEVSLSE-LNFIHRHK 179
+H+A + N++ VG+ G+ GQ++D+ SEGK S+ L FIH HK
Sbjct: 137 EHVA-TQTHNVSLTNLVDVIARLGRTVGAAGLVGGQVLDLESEGKSNITSDILKFIHVHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRD 238
TG +E S+VSG I+ G N E+IER+ ++ + +G+A+Q+ +DI+D+ + E+ + G+D
Sbjct: 196 TGALLETSVVSGAILAGANLEDIERLSHYAQNIGLAFQIIDDILDITSTQAELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L G++ S+K A+ LI +A +LA + A PL+ + FIVS N
Sbjct: 256 KQAQKATYPSLWGLEESQKQAQILIEDAIAQLAPYG-REAYPLEAIARFIVSRKN 309
>gi|425459314|ref|ZP_18838800.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
gi|389822992|emb|CCI29162.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9808]
Length = 326
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 186/295 (63%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 34 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 93
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 94 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 153
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N+ VG+ G+ GQ++D+ SEGK ++S L FIH K
Sbjct: 154 EYVA-TQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L GI+GS++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|428206430|ref|YP_007090783.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
gi|428008351|gb|AFY86914.1| farnesyl-diphosphate synthase [Chroococcidiopsis thermalis PCC
7203]
Length = 308
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 188/295 (63%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + ++ AL+ ++ + +P ++EAMRYSL GGKRL LC+A+CEM GG+
Sbjct: 16 FDLSAYLKQRQVEVEAALESSIIVTYPEKIYEAMRYSLLAGGKRLRPILCLATCEMAGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+G+ AILA L A
Sbjct: 76 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
++IA + KN+ AVG+ G+ GQ++D+ SEGK +V+ L+FIH HK
Sbjct: 136 EYIA-TQTKNVPPERVLRAIAQLGHAVGAAGLVGGQVVDLESEGKSDVTADTLHFIHTHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +VSG ++ G E +++R+ + + +G+A+Q+ +DI+DV + E KT G+D
Sbjct: 195 TAALLEACVVSGGVLAGLEESDLQRLSRYAQNIGLAFQIIDDILDVTATAEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K TYP L GI+ S++ A+ LIA AK+EL F +A PL L +FI + N
Sbjct: 255 LQAQKVTYPSLWGIEESRRQAQALIATAKEELTPFS-EKAQPLIALADFITNRKN 308
>gi|425457244|ref|ZP_18836950.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
gi|389801481|emb|CCI19370.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9807]
Length = 309
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 187/294 (63%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L+FIH KT
Sbjct: 137 EYVATQTLNVPPVQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLSFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|425469791|ref|ZP_18848698.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
gi|389880334|emb|CCI38905.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9701]
Length = 326
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 186/295 (63%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 34 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 93
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 94 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 153
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++ + + +N+ VG+ G+ GQ++D+ SEGK ++S L FIH K
Sbjct: 154 EYV-VTQTRNVPPVQVLEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQK 212
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D
Sbjct: 213 TGALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L GI+GS++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 273 LQAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|428300108|ref|YP_007138414.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
gi|428236652|gb|AFZ02442.1| farnesyl-diphosphate synthase [Calothrix sp. PCC 6303]
Length = 308
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 184/290 (63%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + ALD+AVP+ +P ++EAMRYSL GGKRL L IA+CEM GG+
Sbjct: 16 FDLKAYLKDRQQLCEAALDQAVPMRYPETIYEAMRYSLMAGGKRLRPILTIATCEMTGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 IEMAMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
++I ++K + AVG+ G+ GQ++D+ SEGK + SL LNFIH HKT
Sbjct: 136 EYIVEHTKDVPAERVLKVISRLGRAVGAAGLVGGQVVDLESEGKTDTSLETLNFIHNHKT 195
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EA +V G I+ G +E++++R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 196 AALLEACVVCGGILAGVSEDDLQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKDL 255
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K TYP L GI+ S+ A +L+A+A QEL F +A PL + ++I
Sbjct: 256 ASQKVTYPSLWGIEESRNKANQLVADACQELEPFGE-KAQPLMVIAHYIT 304
>gi|427730885|ref|YP_007077122.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
gi|427366804|gb|AFY49525.1| geranylgeranyl pyrophosphate synthase [Nostoc sp. PCC 7524]
Length = 309
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 122/292 (41%), Positives = 185/292 (63%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K ALD+++P+ +P ++E+MRYSL GGKRL LC+A+CEM+GG+
Sbjct: 16 FDLGAYLKERKKICEAALDKSMPVVYPEKIYESMRYSLLAGGKRLRPILCLATCEMMGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRG +NHKV+GE AILA L A
Sbjct: 76 IEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNIN------------SAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +A +++ A+G+ G+ GQ++D++SEGK ++SL LNFIH HK
Sbjct: 136 ELVATQTPESVTRERVLQVIARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +V G I+ G + E+++R+ + + +G+A+Q+ +DI+DV + E KT G+D
Sbjct: 196 TAALLEACVVCGGILAGASSEDVQRLSRYAQNIGLAFQIIDDILDVTATQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ K TYP L G++ S+ A+ELI A EL F + A PL L +FI S
Sbjct: 256 LVAQKVTYPSLWGLEKSRAKAQELIEAACAELEPFGQS-AQPLQALAHFITS 306
>gi|87303385|ref|ZP_01086173.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
gi|87282033|gb|EAQ73995.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 5701]
Length = 300
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/290 (42%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y Q+ AL+ A+ P L EAMRYSL GGKRL LC+A+CE+ GG
Sbjct: 9 FDFAAYLESARGQVELALEAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 69 VALALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAQAILAGDALLTRAF 128
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ ++ A G+ G+ GQ++D+ SEGK+V L+ L +IH HKTG
Sbjct: 129 EMVALRSPGVPAERLLQVVGELSLAAGAPGLVGGQVVDLESEGKDVDLATLEYIHLHKTG 188
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
++A +++G +I G E ++ +R + + +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 189 ALLQACVLTGAMIAGAPEPLLQGLRTYSRGIGLAFQIIDDILDVTASSEVLGKTAGKDLT 248
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G++ S++ A L+AEAK L + + A PL L ++I S
Sbjct: 249 ADKTTYPKLLGLEESRQRADALVAEAKAALQPWQAS-AQPLLALADYITS 297
>gi|33863380|ref|NP_894940.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640829|emb|CAE21284.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 306
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 116/271 (42%), Positives = 174/271 (64%), Gaps = 13/271 (4%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
FF Y A + EALD+++ P L EAMRYSL GGKRL LC+A+CE+ GG
Sbjct: 14 FFDFPAYLAAAKASVEEALDDSLGPERPEQLREAMRYSLLAGGKRLRPILCLAACELAGG 73
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL +
Sbjct: 74 EPAEALPTAVALEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRS 133
Query: 132 MQHIAIIK-----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A+ ++ G+ G+ GQ++D+ EGKEV L L FIH HKT
Sbjct: 134 FEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEFIHLHKT 193
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G + A ++ G +IGG ++ I+ +R + + +G+A+Q+ +DI+DV S ++ KT G+D+
Sbjct: 194 GALLSACVICGALIGGAEDDLIDALRIYARGIGLAFQIIDDILDVTASSDVLGKTAGKDL 253
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+ DK TYPKL+G+D S++ A+ L++EAK L
Sbjct: 254 LADKTTYPKLLGLDESRRRAELLVSEAKAAL 284
>gi|87124785|ref|ZP_01080633.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
gi|86167664|gb|EAQ68923.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. RS9917]
Length = 315
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 192/292 (65%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F N Y A + ++ ALD ++P P L EAMRYSL GGKRL LC+A+CE+ GG
Sbjct: 20 FDFNAYLAARKAEVESALDASLPPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGD 79
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++AM A A+E++ TM++I DDLP +D+DDLRRG+P+NHKV+GEA AILA AL A
Sbjct: 80 PALAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 139
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ + V G+ G+ GQ++D+ SEGK+V L L +IH HKTG
Sbjct: 140 EMVALRSPGVPAERLLQVVAELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 199
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G +I G + I+ +R + + +G+A+Q+ +DI+DV S ++ KT G+D++
Sbjct: 200 ALLRACVITGALIAGADASRIDSLRTYARGIGLAFQIVDDILDVTASSDVLGKTAGKDLI 259
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT---RAAPLDHLVNFIV 289
DK TYPKL+G++ S++ AK L+ EAK LA F PT +A+PL L ++++
Sbjct: 260 ADKTTYPKLLGLEESRQRAKALVEEAKASLAAFKPTEPAKASPLLALADYVI 311
>gi|425446281|ref|ZP_18826289.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
gi|389733543|emb|CCI02694.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9443]
Length = 309
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 186/294 (63%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 137 EYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQQLIDSAINELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|67924905|ref|ZP_00518297.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
gi|67853239|gb|EAM48606.1| Polyprenyl synthetase [Crocosphaera watsonii WH 8501]
Length = 309
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 186/294 (63%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F++ Y K + + ALD+++ + P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 17 FELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA AL A
Sbjct: 77 VEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I + VG+ G+ GQ++D+ SEG+ +V++ L FIH HKT
Sbjct: 137 EYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG I+ G E+IER+ + + +G+A+Q+ +D++DV S E KT G+D
Sbjct: 197 GALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDE 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L G++ S+K A+ LI +A +L+ + A PL+ + FIV+ N
Sbjct: 257 RAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQPLEAIAQFIVARKN 309
>gi|416403979|ref|ZP_11687631.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
gi|357261577|gb|EHJ10825.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Crocosphaera
watsonii WH 0003]
Length = 307
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 186/294 (63%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F++ Y K + + ALD+++ + P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 15 FELASYLKEKKQLVEAALDQSLHITRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA AL A
Sbjct: 75 VEMSLPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 134
Query: 133 QHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I + VG+ G+ GQ++D+ SEG+ +V++ L FIH HKT
Sbjct: 135 EYVATQTCNVDFPNLIDVIARLGRTVGAAGLVGGQVLDLESEGRTDVTVDTLKFIHIHKT 194
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG I+ G E+IER+ + + +G+A+Q+ +D++DV S E KT G+D
Sbjct: 195 GALLETSVVSGAILAGAKPEDIERLSRYAQNIGLAFQIIDDVLDVTASSEELGKTAGKDE 254
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L G++ S+K A+ LI +A +L+ + A PL+ + FIV+ N
Sbjct: 255 RAQKATYPSLWGLEESQKQAQALIDDAIAQLSPYGQA-AQPLEAIAQFIVARKN 307
>gi|443669312|ref|ZP_21134542.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
gi|159030944|emb|CAO88634.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330405|gb|ELS45123.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
DIANCHI905]
Length = 309
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 137 EYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A+ LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425436138|ref|ZP_18816577.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|425449068|ref|ZP_18828911.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
gi|389679196|emb|CCH92000.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9432]
gi|389764903|emb|CCI09068.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 7941]
Length = 309
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 137 EYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A+ LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQHLIDSAINELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|428177866|gb|EKX46744.1| hypothetical protein GUITHDRAFT_157722 [Guillardia theta CCMP2712]
Length = 303
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 193/303 (63%), Gaps = 23/303 (7%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPL-----PHPA---ILHEAMRYSL-PGGKRLMSTLCI 63
F + +Y + ++ ALDE++ + P+ + +HE+MRYSL GGKR+ L +
Sbjct: 2 FADIKQYFESQLPKVEAALDESMNVLKRDWPYDSKAETVHESMRYSLMAGGKRIRPILTL 61
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+CEM+GG++ +AM A A E++ TM++I DDLPC+DNDDLRRGKP+NHKVFG+ A+LA
Sbjct: 62 AACEMMGGTEEMAMPTALAAEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGDDIAVLA 121
Query: 124 CQALHCLAMQHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEG-KEVSLSE 171
L + ++IA + VG+ G+ GQ++DI SEG K+V++
Sbjct: 122 GDGLLSYSFEYIARYTKGVAPERVLDVIARCGKCVGALGLVGGQVVDIQSEGKKDVTIET 181
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPE 230
L +IH HKT +E +V G I+GG NEE+I+R+ F +G+++Q+ +DI+DV S
Sbjct: 182 LQWIHEHKTAALLEFCVVGGGILGGANEEQIQRLSKFAMNIGLSFQIIDDILDVTQDSAT 241
Query: 231 MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ + G+D++ DKATYPKL+G++ SK+ A+ LIAEAK +L + +AAPL L +FI +
Sbjct: 242 LGKTAGKDLLVDKATYPKLMGLEKSKERAEALIAEAKDQLKPWG-DKAAPLMALADFITA 300
Query: 291 FGN 293
N
Sbjct: 301 RKN 303
>gi|16329282|ref|NP_440010.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|383321022|ref|YP_005381875.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324192|ref|YP_005385045.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490076|ref|YP_005407752.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435342|ref|YP_005650066.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|451813441|ref|YP_007449893.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|1651762|dbj|BAA16690.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|339272374|dbj|BAK48861.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
gi|359270341|dbj|BAL27860.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273512|dbj|BAL31030.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276682|dbj|BAL34199.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451779410|gb|AGF50379.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 302
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 185/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + +Y +K + ALD ++ + P ++EAMRYSL GGKRL LCI +CE+ GG
Sbjct: 10 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 69
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++A+ ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA L A
Sbjct: 70 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 129
Query: 133 QHI----------AIIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++ A+++ + VG+ G+ GQ++D+ SEG+ +++ L FIH HKT
Sbjct: 130 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 189
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS+++G I+ G E+ +R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 190 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 249
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP L+G++ S+ A+ LI +A L F P+ A PL + +IV+
Sbjct: 250 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVA 299
>gi|427706110|ref|YP_007048487.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
gi|427358615|gb|AFY41337.1| farnesyl-diphosphate synthase [Nostoc sp. PCC 7107]
Length = 309
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 189/301 (62%), Gaps = 18/301 (5%)
Query: 10 LPKFFQVNEYKALKAKQ--INEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
+P+ N LK +Q + ALD +P+ +P ++E+MRYSL GGKR+ LC+A+C
Sbjct: 10 MPQTATFNLVAYLKERQKLCDTALDTCMPVIYPETIYESMRYSLLAGGKRVRPILCLATC 69
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
EM+GG+ +AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+G+ AILA
Sbjct: 70 EMMGGTIEMAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVYGDDIAILAGDG 129
Query: 127 LHCLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELN 173
L A + +A +N+ A+G+ G+ GQ++D+ SEGK ++SL LN
Sbjct: 130 LLAFAFELVATQTPENVPRDKVLQVIARLGRALGAAGLVGGQVVDLESEGKSDISLETLN 189
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMRE 233
FIH HKT +EA +V G I+ G + E+++R+ + + +G+A+Q+ +DI+DV + E
Sbjct: 190 FIHNHKTAALLEACVVCGGILAGASSEDVQRLTRYSQNIGLAFQIIDDILDVTATQEQLG 249
Query: 234 KT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFG 292
KT G+D++ K TYP L GI+ S+ A++LI A EL + + A PL + +FIV+
Sbjct: 250 KTAGKDLLAKKVTYPSLWGIEESRAKAQQLIESACAELEPYG-SLAQPLKAVAHFIVNRN 308
Query: 293 N 293
N
Sbjct: 309 N 309
>gi|440753463|ref|ZP_20932666.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
gi|440177956|gb|ELP57229.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
TAIHU98]
Length = 309
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 137 EYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A+ LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|209526715|ref|ZP_03275238.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|376002372|ref|ZP_09780207.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|423067929|ref|ZP_17056719.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
gi|209492847|gb|EDZ93179.1| Polyprenyl synthetase [Arthrospira maxima CS-328]
gi|375329252|emb|CCE15960.1| geranyltranstransferase [Arthrospira sp. PCC 8005]
gi|406710557|gb|EKD05765.1| geranylgeranyl diphosphate synthase [Arthrospira platensis C1]
Length = 316
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 179/274 (65%), Gaps = 14/274 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y + K + + ALD A+ + +P ++E+MRYSL GGKRL LC+A+CE++GG+
Sbjct: 24 FDLSTYLSQKKELVEAALDAAIAVTYPEKIYESMRYSLMAGGKRLRPILCLATCELLGGT 83
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 84 VEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAF 143
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+ +A +++ + AVG+ G+ GQ++D+ SEG ++S L FIH HKT
Sbjct: 144 EFVATQTQGVPPERVLQVIGRLGRAVGATGLVGGQVVDLASEGLSDISEETLTFIHTHKT 203
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDM 239
G +EA +V G I+ G NE ++ER+ + K +G+A+Q+ +DI+D+ + S E+ + G+D+
Sbjct: 204 GALLEACVVCGAILAGANETDLERLSRYAKNIGLAFQIVDDILDITVPSSELGKTAGKDL 263
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
KATYP L G++ S+ A++L+ EAK EL F
Sbjct: 264 EAQKATYPSLWGLEKSRAKAQQLVEEAKAELQAF 297
>gi|407957152|dbj|BAM50392.1| geranylgeranyl pyrophosphate synthase [Synechocystis sp. PCC 6803]
Length = 319
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/291 (39%), Positives = 185/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + +Y +K + ALD ++ + P ++EAMRYSL GGKRL LCI +CE+ GG
Sbjct: 27 FDLAQYLQVKKGVVEAALDSSLAIARPEKIYEAMRYSLLAGGKRLRPILCITACELCGGD 86
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++A+ ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA L A
Sbjct: 87 EALALPTACALEMIHTMSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDGLLAYAF 146
Query: 133 QHI----------AIIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++ A+++ + VG+ G+ GQ++D+ SEG+ +++ L FIH HKT
Sbjct: 147 EYVVTHTPQADPQALLQVIARLGRTVGAAGLVGGQVLDLESEGRTDITPETLTFIHTHKT 206
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS+++G I+ G E+ +R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 207 GALLEASVLTGAILAGATGEQQQRLARYAQNIGLAFQVVDDILDITATQEELGKTAGKDV 266
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP L+G++ S+ A+ LI +A L F P+ A PL + +IV+
Sbjct: 267 KAQKATYPSLLGLEASRAQAQSLIDQAIVALEPFGPS-AEPLQAIAEYIVA 316
>gi|422305087|ref|ZP_16392424.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
gi|389789644|emb|CCI14373.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9806]
Length = 309
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 137 EYVATQTHNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 197 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A+ LI A EL+ +D A PL + +IV+ N
Sbjct: 257 QAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 309
>gi|425441812|ref|ZP_18822079.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
gi|389717377|emb|CCH98522.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9717]
Length = 326
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/294 (41%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 34 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 93
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 94 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 153
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A I++ + VG+ G+ GQ++D+ SEGK ++S L FIH KT
Sbjct: 154 EYVATQTLNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESEGKPDISAETLGFIHTQKT 213
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D+
Sbjct: 214 GALLETSVVSGAVLAGAKGEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKDL 273
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATYP L GI+GS++ A+ LI A EL+ +D A PL + +IV+ N
Sbjct: 274 QAQKATYPSLWGIEGSRQQAQHLIDSAIGELSSYDEA-AEPLRAIAEYIVNRKN 326
>gi|21592547|gb|AAM64496.1| putative geranylgeranyl pyrophosphate synthase GGPS3 [Arabidopsis
thaliana]
Length = 360
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 196/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ +N ALD +VPL P + EA+RYSL GGKR+ LCIA CE++GG
Sbjct: 64 FDFKLYMIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAF 183
Query: 133 QHIAIIKAK------------NINSAVGSEGIAAGQIMDINSE---GKEVSLSELNFIHR 177
+H+ ++ + + A+G+ G+ AGQ++D+ SE +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V GVI+GGG EEEIE++R + + +G+ +Q+ +DI DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDIPDVTKSTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++ SK+ A+EL EA+++L FDP++AAPL L ++I N
Sbjct: 304 KDVMAGKLTYPRLIGLERSKEVAEELRREAEEQLLGFDPSKAAPLVALASYIACRHN 360
>gi|443323350|ref|ZP_21052357.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
gi|442786914|gb|ELR96640.1| geranylgeranyl pyrophosphate synthase [Gloeocapsa sp. PCC 73106]
Length = 309
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 186/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + I ALD ++ + P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 17 FDLKTYLDAQKTIIEAALDRSLSISKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+G+ AILA L A
Sbjct: 77 SVIALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGDDIAILAGDGLLAYAF 136
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+++A +IK +++ AVG+EG+ GQ++D+ SEGK ++S L FIH HKT
Sbjct: 137 EYVATQTQGVPPERLIKVIIHLSHAVGAEGLVGGQVLDLESEGKTDISAETLTFIHTHKT 196
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EA ++SG + G N E++ER+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 197 GALLEACVLSGADLAGANREDLERLSKYAQNIGLAFQIIDDILDITATVEELGKTAGKDL 256
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L GI+ S+ A++L+ A +L + +A PL + ++IV+
Sbjct: 257 KAQKVTYPSLWGIEASQTQAQQLVEGAIAQLTVYGE-KADPLRAIASYIVT 306
>gi|318040269|ref|ZP_07972225.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CB0101]
Length = 310
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 14/291 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y ++ ALD ++ P L E+MRYSL GGKRL LC+A+CE+ GG
Sbjct: 17 FDFAAYLEASRLKVEAALDGSLGPERPESLRESMRYSLLAGGKRLRPILCLAACELAGGD 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM A A+E++ TM++I DDLP +DNDDLRRG P+NHKV+GEA AILA AL A
Sbjct: 77 SAQAMPTAVALEMIHTMSLIHDDLPAMDNDDLRRGMPTNHKVYGEANAILAGDALLTRAF 136
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ ++ A G+ G+ GQ++D+ EGK V L L +IH HKTG
Sbjct: 137 EMVALRSPGVPAEQLLKVVGELSLASGAPGLVGGQVVDLECEGKNVDLETLEYIHLHKTG 196
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G +I G + +E +R + + +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 197 ALLRACVLTGALIAGAPDALLEALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGKDLT 256
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP-TRAAPLDHLVNFIVS 290
DK TYPKL+G++ S+K A L+AEAK L + +AAPL L ++I S
Sbjct: 257 ADKTTYPKLLGLEESRKRADALVAEAKAALEPWSAGGKAAPLLALADYITS 307
>gi|332706101|ref|ZP_08426173.1| farnesyl-diphosphate synthase [Moorea producens 3L]
gi|332355193|gb|EGJ34661.1| farnesyl-diphosphate synthase [Moorea producens 3L]
Length = 309
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 185/290 (63%), Gaps = 21/290 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
+ E KAL I ALD+A+P P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 23 LKERKAL----IESALDQALPRMEPDKIYEAMRYSLLAGGKRLRPILCLATCELMGGTVE 78
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
+AM +CA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A ++
Sbjct: 79 MAMPTSCALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAFEY 138
Query: 135 IAIIKAKNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTG 181
A + KN+ + AVG+ G+ GQ++D+ SEGK ++ L+FIH HKTG
Sbjct: 139 -AAAQTKNVPAPQVLQVVAWLAKAVGASGLVGGQVLDLESEGKSDIKEETLSFIHTHKTG 197
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+EA +V G I+ G ++R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 198 ALLEACVVCGGILAGATAANLQRLSKYAQNIGLAFQIVDDILDITATQEELGKTAGKDIK 257
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP L G++ SK A+EL+ EAK ++ F +A PL + +FIV+
Sbjct: 258 AQKATYPSLWGLEASKAKAQELVNEAKAQIESFG-EKAQPLIAIADFIVN 306
>gi|354569185|ref|ZP_08988342.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
gi|353538935|gb|EHC08440.1| Farnesyltranstransferase [Fischerella sp. JSC-11]
Length = 308
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/291 (43%), Positives = 186/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K AL++A+ + +P ++EAMRYSL GGKRL +C+A+CEM GG+
Sbjct: 16 FDLITYLKERQKLCEVALEQAISVRYPEKIYEAMRYSLLAGGKRLRPIICLATCEMTGGN 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 IAIAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIAI----IKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSE-LNFIHRHKT 180
+++A+ + A+ ++ AVG+ G+ GQ++D+ SEGK SE L+FIH HKT
Sbjct: 136 EYVAVNTEDVPAERLLRVVAHLGRAVGAAGLVGGQVLDLESEGKSDICSETLDFIHHHKT 195
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G +EAS+V G I+ G +E+ ++R+ + K +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 GALLEASVVCGGILAGTSEDNLKRLSCYAKNIGLAFQIIDDILDITSTQEQLGKTVGKDQ 255
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L GI+ S+K A++LI A EL F A PL L +FI S
Sbjct: 256 KAKKVTYPSLWGIEKSQKQAQQLIESACAELEPFGKA-AEPLVALAHFITS 305
>gi|124026221|ref|YP_001015337.1| polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
gi|123961289|gb|ABM76072.1| Polyprenyl synthetase [Prochlorococcus marinus str. NATL1A]
Length = 299
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 185/291 (63%), Gaps = 16/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F EY ++ +AL ++ P L E+MRYSL GGKRL LC+A+CE+ GG
Sbjct: 8 FDFAEYLEKARTRVEDALGASLGPEKPEKLRESMRYSLLAGGKRLRPILCLAACELAGGE 67
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 68 LEKALPTAVALEMIHTMSLIHDDLPSMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAF 127
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ ++ I+ + I S A G+ G+ GQ++D++ EGKEV L L +IH HKT
Sbjct: 128 EMVS-IRTEGIPSERLLKIIGELSLAAGAPGLVGGQVVDLDCEGKEVDLETLEYIHLHKT 186
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G ++A + G +IGG +E+ ++ + + + +G+A+Q+ +DI+DV S E+ KT G+D+
Sbjct: 187 GALLKACVTCGALIGGADEKLLDALSIYARGIGLAFQIIDDILDVTASSEVLGKTAGKDL 246
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ DK TYPKL+G+D S++ A L+A+AK L + P ++ PL L ++I S
Sbjct: 247 IADKTTYPKLLGLDESRRRADLLVAKAKSALDPW-PEKSKPLLALADYITS 296
>gi|428222583|ref|YP_007106753.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
gi|427995923|gb|AFY74618.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 7502]
Length = 313
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 188/292 (64%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y A ++ +AL+ ++ + +P ++E+MRYSL GKRL LC+A+CE+ GG
Sbjct: 21 FDLCRYLATAKARVEKALEASIKVKYPETIYESMRYSLMASGKRLRPILCLATCELFGGD 80
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S++M ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE A+LA AL A
Sbjct: 81 DSMSMPTACAMEMVHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAVLAGDALLAYAF 140
Query: 133 QHIA----------IIK-AKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ IA I++ + AV +EG+ GQ++D+ SEGK + +L LNFIHRHKT
Sbjct: 141 EFIADNTQNVPSDRILRVVSRLGRAVAAEGLVGGQVVDLESEGKPDTTLETLNFIHRHKT 200
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EAS+VSG I+ G + E+I+R+ + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 201 AALLEASVVSGGILAGADTEDIKRLTIYAQNIGLAFQIIDDILDITSTSEELGKTAGKDI 260
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQEL-AYFDPTRAAPLDHLVNFIVS 290
+ K TYP L+GI S+ A+ LI AK ++ Y P A PL + ++I++
Sbjct: 261 IAQKVTYPSLLGIPESQIQAQNLIDLAKSQVQCYGSP--AIPLMRIADYIIA 310
>gi|75908916|ref|YP_323212.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
gi|75702641|gb|ABA22317.1| farnesyl-diphosphate synthase [Anabaena variabilis ATCC 29413]
Length = 309
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 184/292 (63%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K ALDEA+P+ +P ++E+MRYSL GGKRL LC+A+ EM+GG+
Sbjct: 16 FNLVAYLKERQKLCEAALDEAIPVIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRG +NHKV+G+ AILA L A
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGDDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +AI +++ A+G+ G+ GQ++D++SEGK ++SL LNFIH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDISLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +V G I+ G + E+++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TAALLEACVVCGGILAGASSEDVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ K TYP L GI+ S+ A++LI A EL F A PL + +FI S
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACAELEPFGED-AQPLKAIAHFITS 306
>gi|428780839|ref|YP_007172625.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
gi|428695118|gb|AFZ51268.1| geranylgeranyl pyrophosphate synthase [Dactylococcopsis salina PCC
8305]
Length = 305
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 185/295 (62%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + I +ALD+++P+ P +++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 13 FDLESYLQARKAIIEKALDQSLPIAEPPVIYEAMRYSLLAGGKRLRPILCLATCELVGGT 72
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHK +GE AILA L A
Sbjct: 73 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGQLTNHKKYGEDIAILAGDGLLAYAF 132
Query: 133 QHIAIIKAKNINSA------------VGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + + +N + VG+ G+ GQ++D+ SEG ++SL LN+IH HK
Sbjct: 133 EYVA-AQTQGVNPSSVLRVIAKLGHTVGATGLVGGQVLDLASEGNPDISLETLNYIHTHK 191
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA +V+G I+G +EE + + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 192 TGALLEACVVTGAILGEASEETLAALSRYAYNIGLAFQIIDDILDITATQEELGKTAGKD 251
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ DKATYP+L+G++ SK A ELI A E++ + PL + I + N
Sbjct: 252 VEADKATYPRLLGLEASKAKADELIEAACAEMSPYGDA-GVPLKAIAQLIANRKN 305
>gi|15232010|ref|NP_189747.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
gi|75263903|sp|Q9LHR4.1|GGPPC_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 12,
chloroplastic; Short=GGPP synthase 12; Short=GGPS12;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 12;
AltName: Full=Dimethylallyltranstransferase 12; AltName:
Full=Farnesyl diphosphate synthase 12; AltName:
Full=Farnesyltranstransferase 12; AltName:
Full=Geranyltranstransferase 12; Flags: Precursor
gi|9294084|dbj|BAB01936.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|50253560|gb|AAT71982.1| At3g32040 [Arabidopsis thaliana]
gi|332644160|gb|AEE77681.1| geranylgeranyl diphosphate synthase 12 [Arabidopsis thaliana]
Length = 360
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 194/297 (65%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ ++ AL+ +VP P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+D+ DLRRGKP+NHKVFGE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H+ ++ + + A+G++G+ AGQ+ D+ S+G +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V G IIGGG EEEI+++R +G+ +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+M K TYP+L+G++ S++ A++L EA ++L FD + APL L ++I N
Sbjct: 304 KDVMARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|15222767|ref|NP_175376.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
gi|85540951|sp|O22043.2|GGPP6_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 6,
mitochondrial; Short=GGPP synthase 6; Short=GGPS6;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 6;
AltName: Full=Dimethylallyltranstransferase 6; AltName:
Full=Farnesyl diphosphate synthase 6; AltName:
Full=Farnesyltranstransferase 6; AltName:
Full=Geranyltranstransferase 6; Flags: Precursor
gi|5430748|gb|AAD43148.1|AC007504_3 geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|40823199|gb|AAR92266.1| At1g49530 [Arabidopsis thaliana]
gi|45752710|gb|AAS76253.1| At1g49530 [Arabidopsis thaliana]
gi|332194318|gb|AEE32439.1| geranylgeranyl pyrophosphate synthase 1 [Arabidopsis thaliana]
Length = 336
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 190/302 (62%), Gaps = 27/302 (8%)
Query: 19 YKALKAKQINEALDEA-------VPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMI 69
Y KAK IN+ALD + VPL P + +H+AMRY+L PGGKR+ LC+ +CE++
Sbjct: 35 YMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGKRVRPMLCLVACELV 94
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG +S AM ACA+E++ ++I DDLPC+D+D LRRGKP+NHKVFGE T+ILA AL
Sbjct: 95 GGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRS 154
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSE-----GKEVSLSEL 172
LA++ + + S AVG+EG+ AGQ D+ E ++ L L
Sbjct: 155 LAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYL 214
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
+H HKT +EA+ V G I+GGG++EEIER++++ + VG+ +Q+ +D++D S E
Sbjct: 215 ELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEEL 274
Query: 233 EKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSF 291
KT G+D++ K TYPK++G+D ++++AK L EA++ L FD + PL L ++IV
Sbjct: 275 GKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKR 334
Query: 292 GN 293
N
Sbjct: 335 QN 336
>gi|308081242|ref|NP_001183930.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|148535919|gb|ABQ85646.1| putative geranylgeranyl pyrophosphate synthase 1 [Zea mays]
gi|414590653|tpg|DAA41224.1| TPA: hypothetical protein ZEAMMB73_231747 [Zea mays]
Length = 367
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 195/303 (64%), Gaps = 23/303 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N ALD AVP PA LH+AMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 65 FDFKAYMGERAVAVNRALDAAVPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 124
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+LA AL L+
Sbjct: 125 PEPWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 184
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 185 FHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSETVPLER 244
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG +E+IER+R + + +G+ +Q+ +DI+DV S E
Sbjct: 245 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 304
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KT G+D+ DK TYPKL+G++ S++ A+EL+++A ++LA FD +AAPL HL N+I
Sbjct: 305 LGKTAGKDLASDKTTYPKLLGLEKSREFAEELLSDAVEQLACFDKEKAAPLLHLANYIAH 364
Query: 291 FGN 293
N
Sbjct: 365 RQN 367
>gi|307152571|ref|YP_003887955.1| polyprenyl synthetase [Cyanothece sp. PCC 7822]
gi|306982799|gb|ADN14680.1| Polyprenyl synthetase [Cyanothece sp. PCC 7822]
Length = 307
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 183/292 (62%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + +++AL+ ++P+ P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 15 FDLKAYLKQQKDLVDQALEGSLPITKPEKIYEAMRYSLLAGGKRLRPILCLATCELMGGT 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 75 IEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLSYAF 134
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +A + +N+ VG+ G+ GQ++D+ SEGK +++ L FIH HK
Sbjct: 135 EFVA-TQTRNVPPNQVLQVIARLGRTVGAAGLVGGQVLDLESEGKLDITAETLTFIHTHK 193
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRD 238
TG +E S++SG I+ G E+ R+ + + +G+A+Q+ +DI+D+ + E+ + G+D
Sbjct: 194 TGALLETSVLSGAILAGATSEDQRRLSRYAQNIGLAFQIIDDILDITSTQEELGKSIGKD 253
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ KATYP L GI+ SK A++L+ EA +L + +A P+ + FIVS
Sbjct: 254 VQAQKATYPSLWGIEESKAQAQKLVDEAIAQLVLYGE-KAEPIRAIAQFIVS 304
>gi|11994221|dbj|BAB01343.1| geranyl geranyl pyrophosphate synthase-like protein [Arabidopsis
thaliana]
Length = 306
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 182/266 (68%), Gaps = 17/266 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P + EA+RYSL GGKR+ LCIA CE++GG ++ AMS ACA+E++ T ++I DDLPC
Sbjct: 36 PLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPC 95
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------A 146
+DN DLRRGKP+NHKVFGE A+LA AL LA +H+ ++ + + S A
Sbjct: 96 MDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARA 155
Query: 147 VGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
+G++G+ AGQ++D++SE +V L L FIH HKT +EA+ V G I+GGG EEEIE
Sbjct: 156 IGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIE 215
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKEL 262
++R + + +G+ +Q+ +DI+DV S E KT G+D+M K TYP+L+G++ S++ A++L
Sbjct: 216 KLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKL 275
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFI 288
EA+++L F+ +AAPL L ++I
Sbjct: 276 SREAEEQLLGFESDKAAPLVALASYI 301
>gi|166364196|ref|YP_001656469.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
gi|166086569|dbj|BAG01277.1| geranylgeranyl pyrophosphate synthase [Microcystis aeruginosa
NIES-843]
Length = 309
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 184/295 (62%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 17 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 77 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 136
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N+ VG+ G+ GQ++D+ S GK ++S L FIH K
Sbjct: 137 EYVA-TQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D
Sbjct: 196 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L GI+ S++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 256 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 309
>gi|425467096|ref|ZP_18846380.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
gi|389830220|emb|CCI27968.1| Geranylgeranyl pyrophosphate synthase homolog [Microcystis
aeruginosa PCC 9809]
Length = 326
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 184/295 (62%), Gaps = 17/295 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + ALD ++ + +PA ++EAMRYSL GGKRL LC+A+CE++GGS
Sbjct: 34 FSLASYLEEKRLIVESALDSSLVIGNPAKIYEAMRYSLLAGGKRLRPILCLATCELMGGS 93
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A+ ACA+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA L A
Sbjct: 94 LEMALPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDGLLAYAF 153
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N+ VG+ G+ GQ++D+ S GK ++S L FIH K
Sbjct: 154 EYVA-TQTRNVPPLQILEVIARLGRTVGAAGLVGGQVLDLESAGKPDISAETLGFIHTQK 212
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG ++ G E+I ++ + + +G+A+Q+ +D++D+ + E KT G+D
Sbjct: 213 TGALLETSVVSGAVLAGAKAEDIAKLARYAQNIGLAFQIIDDVLDITATKEELGKTAGKD 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ KATYP L GI+ S++ A++LI A EL+ +D A PL + +IV+ N
Sbjct: 273 LQAQKATYPSLWGIEESRQQAQQLIDSAIGELSGYDEA-AEPLRAIAEYIVNRKN 326
>gi|297832526|ref|XP_002884145.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
gi|297329985|gb|EFH60404.1| geranylgeranyl diphosphate synthase [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 179/292 (61%), Gaps = 33/292 (11%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA +N+ALD AV L P +HEAMRYSL GGKR+ LCIA+CE++GG
Sbjct: 49 FDFMSYMIGKANSVNKALDSAVSLREPIKIHEAMRYSLLAGGKRVRPVLCIAACELVGGE 108
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A+ ACA+E++ TM++I DDLP FGE A+LA AL A
Sbjct: 109 EFLALPAACAVEMIHTMSLIHDDLP----------------FFGEDVAVLAGDALLSFAF 152
Query: 133 QHIA-----------IIKA-KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H+A +++A + A+GSEG+ AGQ++D+ SEG +V L L FIH
Sbjct: 153 EHLATETPEIISPARVVRAIGELAKAIGSEGLVAGQVVDLTSEGMDQNDVGLELLEFIHL 212
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V G I GGG EEIER+R F + +G+ +Q+ +DI+DV S E KT G
Sbjct: 213 HKTAVLLEAATVLGAIFGGGTNEEIERLRKFARCIGLLFQVVDDILDVTKSSEELGKTAG 272
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+D++ DK TYPKL+G++ SK A++L+++A+++L FD + PL L N+I
Sbjct: 273 KDLIADKLTYPKLMGLEKSKDFAEKLLSDAQEQLHGFDSNKVKPLLALANYI 324
>gi|300869086|ref|ZP_07113686.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
gi|300332902|emb|CBN58882.1| farnesyl-diphosphate synthase [Oscillatoria sp. PCC 6506]
Length = 308
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/292 (43%), Positives = 183/292 (62%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y A +A + ALD AVP+ +P ++EAMRYSL GGKRL LC+A+CE++GG+
Sbjct: 16 FDLSVYLAERAAAVEAALDSAVPVTYPEKIYEAMRYSLLAGGKRLRPILCLATCELLGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA E+ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 76 VEMAMPTACAFEMSHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
+ IA + +N+ AVG+ + GQ++D+ SEG +VS LNFIH HK
Sbjct: 136 EFIA-AQTQNVPPQQVLQVVARLGRAVGAAELVGGQVVDLESEGVSDVSEETLNFIHTHK 194
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +EA +V G I+ G +++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 195 TGALLEACVVCGAILAGAEPTDLQRLSRYAQNIGLAFQIVDDILDITATQEELGKTAGKD 254
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ K TYP L GI+ SK+ AK+L+ AK EL F +A PL + +FI +
Sbjct: 255 VQAGKVTYPSLWGIEESKRRAKQLVEAAKAELTIFG-EKAEPLLAIADFITN 305
>gi|17227709|ref|NP_484257.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
gi|17135191|dbj|BAB77737.1| geranylgeranyl diphosphate synthase [Nostoc sp. PCC 7120]
Length = 309
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 181/292 (61%), Gaps = 16/292 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + K ALD A+P+ +P ++E+MRYSL GGKRL LC+A+ EM+GG+
Sbjct: 16 FNLVAYLKERQKLCEAALDAAIPIIYPEKIYESMRYSLLAGGKRLRPILCLATSEMMGGT 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRG +NHKV+GE AILA L A
Sbjct: 76 IEIAMPTACAVEMIHTMSLIHDDLPAMDNDDYRRGMLTNHKVYGEDIAILAGDGLLAYAF 135
Query: 133 QHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+ +AI +++ A+G+ G+ GQ++D++SEGK + SL LNFIH HK
Sbjct: 136 EFVAIRTPESVPRDRVLQVVARLGRALGAAGLVGGQVVDLDSEGKSDTSLETLNFIHNHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA +V G I+ G + E ++R+ + + +G+A+Q+ +DI+D+ + E KT G+D
Sbjct: 196 TAALLEACVVCGGILAGASSENVQRLSRYSQNIGLAFQIIDDILDITSTQEQLGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ K TYP L GI+ S+ A++LI A EL F A PL + +FI S
Sbjct: 256 LLAKKVTYPSLWGIEQSRVKAQQLIEAACTELEPFGED-AQPLKAIAHFITS 306
>gi|15228704|ref|NP_189589.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
gi|75335025|sp|Q9LIA0.1|GGPPB_ARATH RecName: Full=Geranylgeranyl pyrophosphate synthase 11,
chloroplastic; Short=GGPP synthase 11; Short=GGPS11;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase 11;
AltName: Full=Dimethylallyltranstransferase 11; AltName:
Full=Farnesyl diphosphate synthase 11; AltName:
Full=Farnesyltranstransferase 11; AltName:
Full=Geranyltranstransferase 11; Flags: Precursor
gi|11994525|dbj|BAB02589.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
gi|67633672|gb|AAY78760.1| putative geranylgeranyl pyrophosphate synthase [Arabidopsis
thaliana]
gi|332644062|gb|AEE77583.1| geranylgeranyl diphosphate synthase 11 [Arabidopsis thaliana]
Length = 357
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/313 (41%), Positives = 198/313 (63%), Gaps = 26/313 (8%)
Query: 2 INSQRNDTLP---------KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL- 51
++SQ D +P F Y KA+ ++ AL+ +VPL P + EA+RYSL
Sbjct: 40 LSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLL 99
Query: 52 PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSN 111
GGKR+ LCIA+CE++GG ++ AMS ACA+E++ T ++I DDLPC+D+ DLRRGKP+N
Sbjct: 100 AGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTN 159
Query: 112 HKVFGEATAILACQALHCLAMQHIAIIK------------AKNINSAVGSEGIAAGQIMD 159
HK FGE A+LA AL LA +H+ + + A+G++G+ AGQ+ D
Sbjct: 160 HKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVMELAKAIGTKGLVAGQVTD 219
Query: 160 INSEG---KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAY 216
+ S+G +V L L FIH HKT +EA+ V G I+GGG EEEIE++R + + +G+ +
Sbjct: 220 LCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLF 279
Query: 217 QLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP 275
Q+ +DI+DV S E+ + G+D+M K TYP+L+G++ S++ A++L EA ++L FD
Sbjct: 280 QVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLRREAAEQLLGFDS 339
Query: 276 TRAAPLDHLVNFI 288
+AAPL L ++I
Sbjct: 340 DKAAPLVALASYI 352
>gi|428769681|ref|YP_007161471.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
gi|428683960|gb|AFZ53427.1| farnesyl-diphosphate synthase [Cyanobacterium aponinum PCC 10605]
Length = 325
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/311 (39%), Positives = 195/311 (62%), Gaps = 19/311 (6%)
Query: 1 IINSQ-RNDTLPKF---FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGK 55
I+N+ + D P F + Y K + + +ALD+++P+ P ++EAMRYSL GGK
Sbjct: 16 IVNTMIKTDIKPNIDSPFNLKVYLQEKKEIVEKALDDSLPIEKPEKIYEAMRYSLLAGGK 75
Query: 56 RLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVF 115
RL LC+A E++G ++ VAM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+
Sbjct: 76 RLRPILCLAVAELLGQTEDVAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGRLTNHKVY 135
Query: 116 GEATAILACQALHCLAMQHIAI----IKAKNI-------NSAVGSEGIAAGQIMDINSEG 164
GE AILA L A + +AI I ++ I AVG+ G+ GQ++D+ EG
Sbjct: 136 GEDIAILAGDGLLAYAFEFVAIKTSCIPSERIVKVLAILGKAVGANGLVGGQVLDLECEG 195
Query: 165 K-EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIV 223
K +V+ L+FIHR KTG +EA + SG ++ G +E+++ R+ + + +G+A+Q+ +DI+
Sbjct: 196 KADVTADTLSFIHRRKTGALLEACVSSGAVLAGASEDDLARLSVYAQNIGLAFQIVDDIL 255
Query: 224 DVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLD 282
DV + E KT G+D+ KATYP++ G+D S++ A+ELI A +L + +A PL
Sbjct: 256 DVTATSEELGKTAGKDISAQKATYPRIWGLDTSRQKAEELIKNAIAQLDIYG-DKAQPLR 314
Query: 283 HLVNFIVSFGN 293
+ +I++ N
Sbjct: 315 AIAEYIINRKN 325
>gi|62320250|dbj|BAD94520.1| geranylgeranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 360
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 193/297 (64%), Gaps = 17/297 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y KA+ ++ AL+ +VP P + EA+RYSL GGKR+ LCIA+CE++GG
Sbjct: 64 FDFKSYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGD 123
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ AMS ACA+E++ T ++I DDLPC+D+ DLRRGKP+NHKVFGE A+LA AL LA
Sbjct: 124 EATAMSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAF 183
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHR 177
+H+ ++ + + A+G++G+ AGQ+ D+ S+G +V L L FIH
Sbjct: 184 EHMTVVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHL 243
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA+ V G IIGGG EEEI+++R +G+ +G+ +Q+ +DI+DV S E KT G
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+ K TYP+L+G++ S++ A++L EA ++L FD + APL L ++I N
Sbjct: 304 KDVKARKLTYPRLIGLERSREVAEKLRREAAEQLLGFDSNKVAPLVALASYIACRHN 360
>gi|297847270|ref|XP_002891516.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
gi|297337358|gb|EFH67775.1| hypothetical protein ARALYDRAFT_891852 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 190/298 (63%), Gaps = 27/298 (9%)
Query: 23 KAKQINEALDEAVPLPHPAI--------LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
KAK IN+ALD+++PL + ++ + EAMRY+L GGKR+ LC+ +CE++GG +
Sbjct: 40 KAKSINKALDDSIPLCNNSVPLWKPVLEVREAMRYTLLSGGKRVRPMLCLVACELVGGQE 99
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S AM ACA+E++ ++I DDLPC+D+D LRRGKP+NHKVFGE TAILA AL LA++
Sbjct: 100 STAMPAACAVEMIHASSLILDDLPCMDDDSLRRGKPTNHKVFGEKTAILAANALMSLAVE 159
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDI-----NSEGKEVSLSELNFIH 176
+ + S AVG EG+ AGQ D+ + E ++ L L FIH
Sbjct: 160 QTLASTSLGVTSERVLRAVQEMARAVGIEGLVAGQAADLAGGRMSFETEDEGLRYLEFIH 219
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
HKT +EA+ V G I+GGG++EEIER++++ + VG+ +Q+ +D++D S E KT
Sbjct: 220 IHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTA 279
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ K TYPK++G++ ++++AK L EA++ L FD + PL L ++IV N
Sbjct: 280 GKDLITGKLTYPKVMGVENAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 337
>gi|452824591|gb|EME31593.1| geranylgeranyl pyrophosphate synthetase [Galdieria sulphuraria]
Length = 370
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 190/289 (65%), Gaps = 17/289 (5%)
Query: 18 EYKALKAKQINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
++ K I E L+ ++PL P +++E+MRYSL GGKR+ LCIA+CE+ GGS
Sbjct: 80 QFMKRKKDYIEEQLNRSIPLLDPRLGLIYESMRYSLLAGGKRIRPMLCIATCELFGGSTL 139
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
A A A+E++ TM++I DDLP +DNDD RRGK +NHKVFGE AILA AL A ++
Sbjct: 140 TATPTAVALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVFGEDIAILAGDALLARAFEY 199
Query: 135 IA----------IIKAKN-INSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGK 182
IA ++K + + ++VG GI GQ++DI SEG KEVS+ +L +IH+HKTG
Sbjct: 200 IANETQGVPAEVVLKVISFLGASVGYSGIVGGQVVDILSEGKKEVSIDDLIWIHKHKTGA 259
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMR 241
++ +V+G ++GG EE++ R+ F + +G+A+Q+ +DI+DV S E+ + G+D
Sbjct: 260 LLKCCVVTGALLGGAKEEDVIRVGEFAERIGLAFQVADDILDVTASFEELGKSIGKDERS 319
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DKAT+P+L+G++ SK+ A++L+ E+K + + RA L+ L ++IVS
Sbjct: 320 DKATFPRLMGLEESKRFAEKLVQESKYLIEPYG-KRAYYLEALADYIVS 367
>gi|322418643|ref|YP_004197866.1| poluprenyl synthetase [Geobacter sp. M18]
gi|320125030|gb|ADW12590.1| Polyprenyl synthetase [Geobacter sp. M18]
Length = 295
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 181/294 (61%), Gaps = 21/294 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
+ EY K + +++AL+ +P PA LH AMRYS+ GGKR+ L +A+CE +G
Sbjct: 1 MDLKEYLKQKCQLVDQALERYLPDGKELPASLHGAMRYSVFAGGKRVRPVLMLAACEAVG 60
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GS M ACA+E++ T ++I DDLP +DNDD RRG P+NHKV+GEATAILA AL
Sbjct: 61 GSPQAVMPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE 120
Query: 131 AM-------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIH 176
A + +I + I A GS G+ GQ++D+ SEG+ +V L+ L++IH
Sbjct: 121 AFILLSANGEGGDPAARLRVI--QEIAVASGSRGMVGGQVVDMESEGRHDVDLATLSYIH 178
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKT 235
HKTG I AS+ SG I+GG +EE+ + + + +G+A+Q+ +DI+DV G+ E+ +
Sbjct: 179 THKTGALIRASVRSGAIMGGASEEQFKALTRYADAIGLAFQIADDILDVEGTTEELGKDA 238
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
G D R KATYP L+G++ SK A+EL+ A L FD RA PL + ++IV
Sbjct: 239 GSDQARGKATYPALMGLEASKARARELVQIALDALEPFD-LRAEPLRAIASYIV 291
>gi|427712083|ref|YP_007060707.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
gi|427376212|gb|AFY60164.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. PCC 6312]
Length = 314
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 184/291 (63%), Gaps = 15/291 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y + + +AL+ ++ + +P ++++MRYSL GGKRL LC+A+CE++GG+
Sbjct: 22 FNLKTYLQDRKALVEQALEASITITYPEKIYDSMRYSLLAGGKRLRPILCLATCELLGGT 81
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +DNDD RRGK +NHKV+GE AILA L A
Sbjct: 82 LEMAMPTACALEMIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGEDIAILAGDGLLAYAF 141
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKT 180
+ + +KA+ + AV + G+ GQ++D+ SEG E+++ LNFIH HKT
Sbjct: 142 EFVVENTVGVKAEKLLKVISRLGHAVAATGLVGGQVVDLESEGITEITIETLNFIHSHKT 201
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDM 239
G +EAS++SG ++ G + ++R+ N+ + +G+A+Q+ +D++D+ + E+ + G+D+
Sbjct: 202 GALLEASVLSGGLLAGAEGDAVQRLTNYARNIGLAFQIVDDVLDITSTQEELGKSIGKDI 261
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L GI+ S+ A+ L+ AK EL+ F A PL + +FI +
Sbjct: 262 QAQKVTYPSLWGIEASRVEAQRLVDLAKAELSPFGAA-AIPLQAIADFITA 311
>gi|308080812|ref|NP_001183944.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
gi|148535921|gb|ABQ85647.1| putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 361
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 193/298 (64%), Gaps = 23/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N ALD A+P PA LH+AMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 59 FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 118
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+LA AL L+
Sbjct: 119 PESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 178
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 179 FHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLEL 238
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG +E+IE +R + + +G+ +Q+ +DI+DV S E
Sbjct: 239 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEE 298
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DK TYPKL+G+ S++ A++L+++A ++LA FD +AAPL HL N+I
Sbjct: 299 LGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYI 356
>gi|414887302|tpg|DAA63316.1| TPA: putative geranylgeranyl pyrophosphate synthase 2 [Zea mays]
Length = 441
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 194/303 (64%), Gaps = 23/303 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N ALD A+P PA LH+AMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 139 FNFKAYMEERAVAVNRALDAAIPAGGLPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 198
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+S AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+LA AL L+
Sbjct: 199 PESWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 258
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 259 FHHMASVGSYPPAVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSQTVPLEL 318
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG +E+IE +R + + +G+ +Q+ +DI+DV S E
Sbjct: 319 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIEALRKYARSIGLLFQVVDDILDVTKSSEE 378
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KT G+D+ DK TYPKL+G+ S++ A++L+++A ++LA FD +AAPL HL N+I
Sbjct: 379 LGKTAGKDLASDKTTYPKLLGLAKSREFAEKLVSDATEQLACFDEEKAAPLLHLANYIAH 438
Query: 291 FGN 293
N
Sbjct: 439 RQN 441
>gi|78779464|ref|YP_397576.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712963|gb|ABB50140.1| farnesyl-diphosphate synthase [Prochlorococcus marinus str. MIT
9312]
Length = 300
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 182/286 (63%), Gaps = 14/286 (4%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA 76
EY K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG S+A
Sbjct: 13 EYLKNAKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLA 72
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA 136
+ A AIE++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A + ++
Sbjct: 73 VPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVS 132
Query: 137 I-------IKAKNI----NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+ + N+ + G+ G+ GQ++D+ EGKEV L L +IH HKTG ++
Sbjct: 133 LRSPGVDPTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLK 192
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKA 244
A + +G +I G NEE ++ + + + +G+A+Q+ +DI+D+ S E KT G+D++ DK
Sbjct: 193 ACVRTGAMIAGANEETLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKT 252
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
TYPKL+G++ SKK A +L+ AK+ + + A L L +FI +
Sbjct: 253 TYPKLLGMEESKKRAFDLVENAKKAIKPWG-ADAKYLISLADFITN 297
>gi|254423009|ref|ZP_05036727.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
gi|196190498|gb|EDX85462.1| polyprenyl synthetase superfamily [Synechococcus sp. PCC 7335]
Length = 307
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 190/297 (63%), Gaps = 18/297 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + Y + ++ Q+ A+D A+P+ +P ++EAMRYSL GGKRL LC+A+CEM+
Sbjct: 9 PSTFDLKSYLSDRSCQVEAAIDAALPVVYPEQIYEAMRYSLLAGGKRLRPILCLATCEML 68
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G S ++AM ACA+E++ TM++I DDLP +D+DD RRGK +NHKV+GE A+LA AL
Sbjct: 69 GASANIAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEGVAVLAGDALLT 128
Query: 130 LAMQHIA--------------IIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
A +HIA I+K + AVG+EG+ GQ++D+ SEG V L F
Sbjct: 129 YAFEHIATQTPQGSDGADPQHILKVVAQLGRAVGAEGLVGGQVVDLASEGTLVDEETLTF 188
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK 234
IH HKT +E S+ SG ++ G +E ++R+R + + +G+A+Q+ +D++D+ +PE K
Sbjct: 189 IHMHKTAALLEVSVTSGAMLAGASEAVVDRLRRYAQRIGLAFQIVDDVLDITSTPETLGK 248
Query: 235 T-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ G+D+ KATYP L G++ S++ A++L+A+A EL+ F A PL + FI +
Sbjct: 249 SIGKDIAAQKATYPSLWGLEESQRKAEQLVADAISELSEFGEG-AQPLVAIAQFITA 304
>gi|126696514|ref|YP_001091400.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543557|gb|ABO17799.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 299
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 181/287 (63%), Gaps = 17/287 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ +Y K I EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG
Sbjct: 8 YDFEKYLKQTKKVIEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGE 67
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S+A+ A AIE++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A
Sbjct: 68 PSLAVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAVAILAGDALLTRAF 127
Query: 133 QHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +++ ++ G+ G+ GQ++D+ EGKEV L L +IH HKTG
Sbjct: 128 EMVSLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLDTLEYIHLHKTG 187
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
++A + +G +I G NE+ ++ + + + +G+A+Q+ +DI+D+ S E KT G+D++
Sbjct: 188 ALLKACVRTGAMIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLL 247
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
DK TYPKL+G++ SKK A +L+ +AK+ + + A +HL++
Sbjct: 248 ADKTTYPKLLGMEESKKRAFDLVEKAKKAIEPW----GADANHLISL 290
>gi|123968708|ref|YP_001009566.1| polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
gi|123198818|gb|ABM70459.1| Polyprenyl synthetase [Prochlorococcus marinus str. AS9601]
Length = 300
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 179/279 (64%), Gaps = 14/279 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG S+A+ A AI
Sbjct: 20 KVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAI 79
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK---- 139
E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A + +++
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVD 139
Query: 140 -------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
++ G+ G+ GQ++D+ EGKEV L L +IH HKTG ++A + +G
Sbjct: 140 PTRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLKTLEYIHLHKTGALLKACVRTGA 199
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+I G NE+ + + + + +G+A+Q+ +DI+D+ S E KT G+D++ DK TYPKL+G
Sbjct: 200 MIAGANEKLLHALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 259
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ SKK A +L+ +AK+ + + P A L L +FI +
Sbjct: 260 MEESKKRAFDLVEKAKKAIEPWGPD-AKYLISLADFITN 297
>gi|443477457|ref|ZP_21067303.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
gi|443017422|gb|ELS31868.1| Farnesyltranstransferase [Pseudanabaena biceps PCC 7429]
Length = 307
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 185/294 (62%), Gaps = 15/294 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F +++Y +++ ALD ++ + +P ++E+MRYSL GGKRL LC+A+ E++GG
Sbjct: 15 FNLDKYLRDLKQEVEAALDASISVTYPEKIYESMRYSLMAGGKRLRPILCLAAHELLGGD 74
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+G+ AILA AL A
Sbjct: 75 LAAAMPTACAMEMVHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGDDIAILAGDALLAYAF 134
Query: 133 QHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKT 180
+ IA I+KA ++ AV + G+ GQ++D+ EGK +V+ L FIH HKT
Sbjct: 135 EFIAVQTKGVPAERILKAIAHLGHAVAATGLVGGQVVDLECEGKSDVTAEILTFIHIHKT 194
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+E+ ++ G ++ G N+ +I+R+ + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 195 AALLESCVICGALLAGANDTDIKRLSTYANNIGLAFQIIDDILDITATSEQLGKTAGKDL 254
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
K TYP L GI+ S+ A+EL+ +AK +L + A PL L ++I + N
Sbjct: 255 AAQKVTYPSLWGIEASQLKAQELVEQAKAQLVSYGDA-ALPLMALADYITARKN 307
>gi|113477591|ref|YP_723652.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
gi|110168639|gb|ABG53179.1| farnesyl-diphosphate synthase [Trichodesmium erythraeum IMS101]
Length = 316
Score = 223 bits (568), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 189/307 (61%), Gaps = 22/307 (7%)
Query: 7 NDTLPKF-----FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMST 60
N LP+F F ++ Y + + +ALD ++ + +P ++EAMRYSL GGKRL
Sbjct: 12 NPMLPQFQIDTTFDLSNYLVERKALVEKALDNSIKIVYPEKIYEAMRYSLLAGGKRLRPI 71
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LC+A+CE+ GG+ +AM ACA+E++ TM++I DDLP +DNDD RRG+ +NHKV+GE A
Sbjct: 72 LCLATCELSGGNIEMAMPTACALEMIHTMSLIHDDLPSMDNDDYRRGQLTNHKVYGEDIA 131
Query: 121 ILACQALHCLAMQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEG-KEV 167
ILA L A + + + + KN+ A G+ G+ GQ++D+ SEG +V
Sbjct: 132 ILAGDGLLSYAFEFV-VTQTKNVLPKQVLQVIARLGKASGAAGLVGGQVVDLASEGISQV 190
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG 227
S L+FIH HKTG +EAS+V G I+ ++ + R+ + + +G+A+Q+ +DI+D+
Sbjct: 191 SEKTLHFIHTHKTGALLEASVVCGAILADVSQANLYRLERYAQNIGLAFQIVDDILDITA 250
Query: 228 SPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
+ E KT G+D+ KATYP + G++ S+ A++L+ +AK EL F + PL L +
Sbjct: 251 TTEELGKTAGKDIEAKKATYPVIWGLEKSRFQAQKLVEKAKAELEVFG-DKVMPLIALAD 309
Query: 287 FIVSFGN 293
FI+S N
Sbjct: 310 FIISRSN 316
>gi|302819480|ref|XP_002991410.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
gi|300140803|gb|EFJ07522.1| hypothetical protein SELMODRAFT_133501 [Selaginella moellendorffii]
Length = 328
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 186/309 (60%), Gaps = 15/309 (4%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLP--HPAIL--HEAMRYSLPGGKRL 57
I + + T P F + Y K K ++ ++ A+P P P L HEAMRY+L G+ +
Sbjct: 19 IATSASSTKPNKFDYDLYVKSKFKAVSISIQHALPPPFKRPETLQLHEAMRYALSQGRLM 78
Query: 58 MSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGE 117
+ +CIA+CE++GGSQ AM ACA+E++ T +QDDLP +DN +LR GKP+ H FG
Sbjct: 79 CAIVCIAACELVGGSQDDAMPGACAVEMIKTSTCVQDDLPSIDNAELRDGKPTVHCAFGI 138
Query: 118 ATAILACQALHCLAMQHIAI-----IKAK---NINSAVGSEGIAAGQIMD--INSEGKEV 167
TA+ A AL L +H+A A+ ++ AVGS G+ AGQ +D I + G+ V
Sbjct: 139 PTALFAGTALLVLGFEHLAAHYRGDTAARMVGEVSRAVGSTGLLAGQAVDMGIQNAGRAV 198
Query: 168 SLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG 227
L L F+H HKT +EAS+V G I GG ++++IE +R +G+ G+ YQ+ +DI D
Sbjct: 199 ELETLEFVHLHKTSALLEASLVIGAIAGGASDQDIEALRAYGRVTGLLYQIVDDIADATK 258
Query: 228 SP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
+ E+ + G+D M K+TY ++G+D S++ +L+ EAK+ L F+ T+A PL HL++
Sbjct: 259 TTEELGKVAGQDAMTGKSTYSTILGVDKSREIVGQLLVEAKERLGVFEETKALPLIHLMD 318
Query: 287 FIVSFGNNN 295
V++ +
Sbjct: 319 HFVNWAYDR 327
>gi|2578822|dbj|BAA23157.1| geranyl geranyl pyrophosphate synthase [Arabidopsis thaliana]
Length = 343
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 188/298 (63%), Gaps = 27/298 (9%)
Query: 23 KAKQINEALDEAVPLPHPAI--------LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
KAK IN+ALD ++PL + ++ +H+AMRY+L GGKR+ LC+ +CE++GG +
Sbjct: 46 KAKSINKALDNSIPLCNNSVPLWEPVLEVHKAMRYTLLSGGKRVRPMLCLVACELVGGQE 105
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S AM ACA+E++ ++I DDLPC+D+D LRRG P+NHKVFGE T+ILA AL LA++
Sbjct: 106 STAMPAACAVEMIHAASLILDDLPCMDDDSLRRGIPTNHKVFGEKTSILASNALMSLAVK 165
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSE-----GKEVSLSELNFIH 176
+ + S AVG+EG+ AGQ D+ E ++ L L +H
Sbjct: 166 QTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMH 225
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
HKT +EA+ V G I+GGG++EEIER++++ + VG+ +Q+ +D++D S E KT
Sbjct: 226 VHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSEELGKTA 285
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G+D++ K TYPK++G+D ++++AK L EA++ L FD + PL L ++IV N
Sbjct: 286 GKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHLQGFDSDKVVPLLSLADYIVKRQN 343
>gi|254526220|ref|ZP_05138272.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
gi|221537644|gb|EEE40097.1| geranylgeranyl pyrophosphate synthetase [Prochlorococcus marinus
str. MIT 9202]
Length = 300
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 182/279 (65%), Gaps = 14/279 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG S+A+ A AI
Sbjct: 20 KVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGKPSLAVPTAVAI 79
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------ 137
E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A + +++
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVD 139
Query: 138 -IKAKNI----NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+ N+ + G+ G+ GQ++D+ EGKEV L L +IH HKTG ++A + +G
Sbjct: 140 PTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGA 199
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+I G NE+ ++ + + + +G+A+Q+ +DI+D+ S E KT G+D++ DK TYPKL+G
Sbjct: 200 MIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 259
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ SKK A +L+ +AK+ + + + A L L +FI +
Sbjct: 260 MEESKKRAFDLVEKAKKAIEPWG-SEAKYLISLADFITN 297
>gi|428219684|ref|YP_007104149.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
gi|427991466|gb|AFY71721.1| farnesyl-diphosphate synthase [Pseudanabaena sp. PCC 7367]
Length = 311
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 179/299 (59%), Gaps = 22/299 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y A + + +ALD ++ + +P ++EAMRYSL GGKRL L +A+CE++GGS
Sbjct: 16 FDMAAYLAERKVIVEQALDRSIAVTYPETIYEAMRYSLMAGGKRLRPILTLAACELLGGS 75
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
VAM ACA+E++ TM++I DDLP +DNDD RRGKP+NHKV+GE AILA L A
Sbjct: 76 IEVAMPTACAMEMIHTMSLIHDDLPAMDNDDFRRGKPTNHKVYGEDMAILAGDGLLAYAF 135
Query: 133 QHIA-------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSE-LNFIHR 177
++IA +++ ++ AV + G+ GQ++D+ EGK + +E L FIH
Sbjct: 136 EYIADRTPSPDHTTAKQVLRVIAHLGHAVAATGLVGGQVVDLECEGKTDTTAETLTFIHM 195
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT +EA + G I+ G +++R+ + +G+A+Q+ +DI+D+ + E KT G
Sbjct: 196 HKTAALLEACVSCGAILAGATAIDLQRLSTYANNIGLAFQIIDDILDITATAEQLGKTAG 255
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFGN 293
+D+ K TYP L GI S+ A+ L+ EA +L DP A PL + NFI + N
Sbjct: 256 KDLAAQKVTYPSLWGIPTSQAKAQALVEEANAQL---DPYGNAAMPLKAIANFITARNN 311
>gi|157413540|ref|YP_001484406.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157388115|gb|ABV50820.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 300
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 182/279 (65%), Gaps = 14/279 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG S+A+ A AI
Sbjct: 20 KVVEEALDVSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSLAVPTAVAI 79
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------ 137
E++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A + +++
Sbjct: 80 EMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMVSLRSPGVD 139
Query: 138 -IKAKNI----NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+ N+ + G+ G+ GQ++D+ EGKEV L L +IH HKTG ++A + +G
Sbjct: 140 PTRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALLKACVRTGA 199
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+I G NE+ ++ + + + +G+A+Q+ +DI+D+ S E KT G+D++ DK TYPKL+G
Sbjct: 200 MIAGANEKLLQALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADKTTYPKLLG 259
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ SKK A +L+ +AK+ + + + A L L +FI +
Sbjct: 260 MEESKKRAFDLVEKAKKAIEPWG-SDAKYLISLADFITN 297
>gi|33861626|ref|NP_893187.1| polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33634203|emb|CAE19529.1| Polyprenyl synthetase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 300
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 177/275 (64%), Gaps = 18/275 (6%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
+ +P F +Y K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC
Sbjct: 6 NNIPDF---EKYLTDTKKVVEEALDFSLGPENPEILRESMRYSLLAGGKRIRPILCLASC 62
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
+ GG S+A+ A AIE++ TM++I DDLP +DND RRG+P+NHKV+G+A AILA A
Sbjct: 63 SLAGGEPSLAVPTAVAIEMIHTMSLIHDDLPAMDNDGFRRGRPTNHKVYGDAIAILAGDA 122
Query: 127 LHCLAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNF 174
L A + ++ +++ ++S G+ G+ GQ++D+ EGKEV L L +
Sbjct: 123 LLTRAFEMVS-LRSPGVDSNRLLNVVGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEY 181
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK 234
IH HKTG ++AS+ +G +I G NEE + + + + +G+A+Q+ +DI+D+ S E K
Sbjct: 182 IHLHKTGALLKASVRTGAMIAGANEELLNALTTYAEGIGLAFQIIDDILDLTSSSEKLGK 241
Query: 235 T-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
T G+D++ DK TYPKL+G++ SKK A +L+ +AK+
Sbjct: 242 TAGKDLLADKTTYPKLLGMEESKKKAFDLVDQAKK 276
>gi|197117645|ref|YP_002138072.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
gi|197087005|gb|ACH38276.1| trans-isoprenyl diphosphate synthase [Geobacter bemidjiensis Bem]
Length = 295
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 181/285 (63%), Gaps = 21/285 (7%)
Query: 25 KQINEALDEAVP--LPH----PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
KQ E +D+A+ LPH PA LH +MRYS+ GGKR+ L +A+CE +GG + A+
Sbjct: 8 KQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGELNSAL 67
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA------ 131
ACA+E++ T ++I DDLP +DNDD RRG P+NHKV+GEATAILA AL A
Sbjct: 68 PAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSC 127
Query: 132 ----MQHIAIIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIE 185
M+ A ++ I A GS G+ GQ++D+ SEGK ++ ++ L++IH HKTG I
Sbjct: 128 NGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKTGALIR 187
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKA 244
AS+ +G I+GG NEE + + + +G+A+Q+ +D++DV G+ E+ + G D R KA
Sbjct: 188 ASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQARGKA 247
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TYP LVG++ SK+ A+EL+ A L FD RA PL + ++IV
Sbjct: 248 TYPALVGLEASKRRAEELVQIALNALEPFD-ERAEPLRAIASYIV 291
>gi|219115519|ref|XP_002178555.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410290|gb|EEC50220.1| farnesyltranstransferase [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 184/297 (61%), Gaps = 18/297 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
F +N+Y A K I +ALDE+V + EAM+YSL GGKR+ LC+A+CEM
Sbjct: 42 FDLNQYIADKLPLIEKALDESVVSTEKETEKIVEAMKYSLMAGGKRIRPVLCLAACEMFN 101
Query: 71 -GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G + AM A ++E++ TM++I DDLP +DNDDLRRGKP+ H ++GE AILA AL
Sbjct: 102 DGDSTPAMPAAVSLEMIHTMSLIHDDLPSMDNDDLRRGKPTCHVIYGEDVAILAGDALLS 161
Query: 130 LAMQHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHR 177
+ +H+A + + +VG++G+A GQ+MD+ EGK +L +L +IH
Sbjct: 162 DSFRHVAEQTKGVAADRVLDVVVRLGRSVGAKGLAGGQVMDLECEGKGSATLEDLRWIHT 221
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKT ++ ++ SG IIGG + EE++ F +G+A+Q+ +DI+DV S E KT G
Sbjct: 222 HKTATLLQVAVASGAIIGGASAEEVKACEQFALNIGLAFQVADDILDVTQSTEELGKTAG 281
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D DK TYPKL+G+DG+++ A+ L+AEAK+ L F RA L L +FI++ N
Sbjct: 282 KDEDTDKTTYPKLLGLDGAREEAERLVAEAKKSLEPFGD-RATALLALADFIINRKN 337
>gi|427701630|ref|YP_007044852.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
gi|427344798|gb|AFY27511.1| geranylgeranyl pyrophosphate synthase [Cyanobium gracile PCC 6307]
Length = 300
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 170/270 (62%), Gaps = 13/270 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y ++ AL+ A+ P L EAMRYSL GGKRL L +A+CE+ GG
Sbjct: 9 FDFTAYLEAARWRVEAALESALGPERPESLREAMRYSLLAGGKRLRPILTLAACELAGGD 68
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM A A+E++ TM++I DDLP +DNDDLRRG+P+NHKV+GEA AILA AL A
Sbjct: 69 ADLAMPTAVAMEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGEAKAILAGDALLTRAF 128
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ ++ A G+ G+ GQ++D+ E ++V L L +IH HKTG
Sbjct: 129 EMVALRSPGVPAERLLQVVGELSLASGAPGLVGGQVVDLECEARQVDLDTLEYIHLHKTG 188
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A ++SG +I G +EE + +R + + +G+A+Q+ +DI+DV S ++ KT G+D+
Sbjct: 189 ALLRACVISGALIAGASEELLTALRTYARGIGLAFQIIDDILDVTASSDVLGKTAGKDLA 248
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
DK TYPKL+G++ S++ A L+ EAK L
Sbjct: 249 ADKTTYPKLLGLEESRRRADALVGEAKAVL 278
>gi|123966393|ref|YP_001011474.1| polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
gi|123200759|gb|ABM72367.1| Polyprenyl synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 300
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 173/265 (65%), Gaps = 13/265 (4%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
++Y K + EALD ++ +P IL E+MRYSL GGKR+ LC+ASC + GG S+
Sbjct: 12 DKYLKETKKIVEEALDLSLGPENPEILRESMRYSLLAGGKRIRPILCLASCSLAGGEPSL 71
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
A+ A AIE++ TM++I DDLP +DNDDLRRG+P+NHKV+G+A AILA AL A + +
Sbjct: 72 AVPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGRPTNHKVYGDAIAILAGDALLTRAFEMV 131
Query: 136 AIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
++ ++ G+ G+ GQ++D+ EGKEV L L +IH HKTG +
Sbjct: 132 SLRSPGVDPNRLLNVIGELSLVAGAPGLVGGQVVDLECEGKEVDLETLEYIHLHKTGALL 191
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
+A + +G +I G N+E ++ + + + +G+A+Q+ +DI+D+ S E KT G+D++ DK
Sbjct: 192 KACVRTGAMIAGANDELLKALTTYAEGIGLAFQIIDDILDLTSSSEKLGKTAGKDLLADK 251
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQ 268
TYPKL+G++ SKK A +L+ +AK+
Sbjct: 252 TTYPKLLGMEESKKRAFDLVDKAKK 276
>gi|323455416|gb|EGB11284.1| hypothetical protein AURANDRAFT_52464 [Aureococcus anophagefferens]
Length = 352
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 187/302 (61%), Gaps = 19/302 (6%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASC 66
L K F + Y A K + +ALDE++ P I+ E+MRYSL GGKR+ +CIA+C
Sbjct: 52 LAKDFDLKAYFAQKVAAVEKALDESLTCTTPETKIIVESMRYSLLAGGKRVRPVMCIAAC 111
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
EM GG++++AM A AIE++ TM++I DDLP +DNDDLRRG P+NH ++G+ AILA A
Sbjct: 112 EMFGGTEAMAMPTAVAIEMIHTMSLIHDDLPAMDNDDLRRGMPTNHVIYGDDVAILAGDA 171
Query: 127 LHCLAMQHIAI------IKAKNI-------NSAVGSEGIAAGQIMDINSEGKE-VSLSEL 172
L + +H A+ I A+ I AVG+ G+A GQ+MD+ E K VSL EL
Sbjct: 172 LLSTSFEHCAVGSTAEGIPAERIVETIRRLGEAVGAVGLAGGQVMDLECEAKSGVSLEEL 231
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
+IH HKT K +E S+ +G ++ G ++++ + + +G+A+Q+ +DI+DV + EM
Sbjct: 232 TWIHTHKTAKLLEVSVAAGAVLAGAAKDDVRQCETYANDIGIAFQVADDILDVTATSEML 291
Query: 233 EKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSF 291
KT G+D DK TYPKL+G+DG++ A L +EA LA + +A PL + +IV
Sbjct: 292 GKTAGKDEDTDKTTYPKLMGLDGARAEADRLYSEAIDSLAPYG-EKAVPLIAIAKYIVER 350
Query: 292 GN 293
N
Sbjct: 351 QN 352
>gi|434386605|ref|YP_007097216.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
gi|428017595|gb|AFY93689.1| geranylgeranyl pyrophosphate synthase [Chamaesiphon minutus PCC
6605]
Length = 305
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 189/297 (63%), Gaps = 15/297 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F + Y + QI ALD A+ +P +++AMRYSL GGKRL LC+ASCE+I
Sbjct: 10 PATFDLVAYLTERQPQIEAALDAAIRPGYPDTIYDAMRYSLLAGGKRLRPMLCLASCELI 69
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GGS M MACA+E++ TM++I DDLP +D+DD RRGK +NHKV+GE AILA L
Sbjct: 70 GGSLDSVMPMACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDGLLA 129
Query: 130 LAMQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHR 177
+ ++IA ++KA ++ AVG+ G+ GQ++D+ SEGK ++S+ L +IH
Sbjct: 130 YSFEYIATQTQGVSADRVLKAIAHLAKAVGANGLVGGQVVDLESEGKPDISVETLTYIHN 189
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTG 236
HKTG ++A +V G I+ G E ++E++ F +G+A+Q+ +DI+D+ + E+ + G
Sbjct: 190 HKTGALLKACVVCGAILAGATEAQLEKLSKFAHNIGLAFQIIDDILDITATQAELGKTAG 249
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+ KATYPKL G++ SK+ A +L+AEAK LA F RA PL L ++I N
Sbjct: 250 KDIQAQKATYPKLWGLEESKRQADKLVAEAKAILAEFG-DRARPLQALADYITDRKN 305
>gi|262411038|gb|ACY66885.1| geranyl geranyl pyrophosphate synthase [Linum usitatissimum]
Length = 215
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 152/213 (71%), Gaps = 13/213 (6%)
Query: 88 TMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------I 137
TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A +H+A I
Sbjct: 3 TMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHMAVSTVGVPAAKI 62
Query: 138 IKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIVSGVIIG 195
++A + ++GSEG+ AGQ++DI+SEG V L +L FIH HKTG +EAS+V G I+G
Sbjct: 63 VRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLEQLEFIHLHKTGALLEASVVLGAILG 122
Query: 196 GGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLVGIDG 254
GG +EE+E++R+F + +G+ +Q+ DI+DV S E+ + G+D++ DK TYP+L+GID
Sbjct: 123 GGTDEEVEKLRSFARCIGLLFQVVGDILDVTKSSQELGKTAGKDLVADKVTYPRLMGIDK 182
Query: 255 SKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
S++ A++L EAKQ L+ FDP +AAPL L N+
Sbjct: 183 SREFAEQLNTEAKQHLSGFDPIKAAPLIALANY 215
>gi|357122245|ref|XP_003562826.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 356
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 196/298 (65%), Gaps = 23/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N+ALD A+P PA LH+AMRY+ L GGKR+ LC+ASC ++GG
Sbjct: 54 FDFKAYMGERAVAVNQALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLASCVVVGG 113
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AM+ A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+LA AL L+
Sbjct: 114 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 173
Query: 132 MQHIAIIKAK------------------NINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A + + + +GSEG+ AGQ++D+ G + V L
Sbjct: 174 FGHMASMDSYPPDVDPEKHPARVVRGIGELARCIGSEGLVAGQVVDLEMTGSTETVPLDR 233
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG++E+IER+R + + +G+ +Q+ +DI+DV S E
Sbjct: 234 LEYIHLHKTAALLEASVVIGAIIGGGSDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 293
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DK TYPKL+G++ S++ A++L+ +AK++LA FD +AAPL +L N+I
Sbjct: 294 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLCDAKEQLADFDKEKAAPLLYLANYI 351
>gi|78213443|ref|YP_382222.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9605]
gi|78197902|gb|ABB35667.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9605]
Length = 296
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y +Q+ ALD ++ P L EAMRYSL GGKRL LC+A+CE+ GG
Sbjct: 5 FDFKAYLGKAKEQVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A+ A A+E++ TM++I DDLP +D+DDLRRG+P+NHKV+GEA AILA AL A
Sbjct: 65 ATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ + V G+ G+ GQ++D+ SEGKEV L L +IH HKTG
Sbjct: 125 EMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G +IGG +E I+ +R + + +G+A+Q+ +DI+D+ S E+ KT G+D++
Sbjct: 185 ALLSACVITGAMIGGADEALIKALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLI 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G+D S++ A L+ EAK+ L + +A PL L +FI S
Sbjct: 245 ADKTTYPKLLGLDESRRRADALVNEAKESLQPW-AEKAVPLLALADFITS 293
>gi|33865276|ref|NP_896835.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
gi|33632445|emb|CAE07257.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. WH 8102]
Length = 309
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 186/294 (63%), Gaps = 14/294 (4%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
L F Y A + +ALD+++ P L EAMRYSL GGKRL LC+A+CE+
Sbjct: 14 LADIFDFKAYLAKAKATVEQALDQSLVPERPESLREAMRYSLLAGGKRLRPILCLAACEL 73
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
GG + AM A A+E++ TM++I DDLP +D+DDLRRG+P+NHKV+GEA AILA AL
Sbjct: 74 AGGDAAQAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALL 133
Query: 129 CLAMQHIAIIK-----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A + +A+ ++ G+ G+ GQ++D+ SEGKEV L L +IH
Sbjct: 134 TRAFEMVALRSPGVPPERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHL 193
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
HKTG + A +++G +IGG ++E I +R + + +G+A+Q+ +DI+D+ S E+ KT G
Sbjct: 194 HKTGALLSACVITGAMIGGADDELIAALRVYARGIGLAFQIIDDILDITASSEVLGKTAG 253
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D++ DK TYPKL+G++ S+K A +L+ EAK L + ++A PL L ++I S
Sbjct: 254 KDLIADKTTYPKLLGLEESRKRAADLVQEAKGVLKPW-ASKAQPLLALADYITS 306
>gi|125558937|gb|EAZ04473.1| hypothetical protein OsI_26621 [Oryza sativa Indica Group]
Length = 366
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 195/298 (65%), Gaps = 23/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F N Y KA +N ALD ++P PA LHEAMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+L AL L+
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G I+GGG++E+IE +R + + +G+ +Q+ +DI+DV S E
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DK TYPKL+G++ S++ A++L+++A+++L+ FD AAPL HL N+I
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYI 361
>gi|253701624|ref|YP_003022813.1| polyprenyl synthetase [Geobacter sp. M21]
gi|251776474|gb|ACT19055.1| Polyprenyl synthetase [Geobacter sp. M21]
Length = 295
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 179/287 (62%), Gaps = 25/287 (8%)
Query: 25 KQINEALDEAVP--LPH----PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
KQ E +D+++ LPH PA LH +MRYS+ GGKR+ L +A+CE +GG+ A+
Sbjct: 8 KQKCELVDQSLERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVGGALKPAL 67
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM----- 132
ACA+E++ T ++I DDLP +DNDD RRG P+NHKV+GEATAILA AL A
Sbjct: 68 PAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTEAFILLSG 127
Query: 133 --------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKF 183
+ +I I A GS G+ GQ++D+ SEGK ++ ++ L++IH HKTG
Sbjct: 128 NGEGVDPAARLRVI--HEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTHKTGAL 185
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRD 242
I AS+ +G I+GG +EE + + + +G+A+Q+ +D++DV G+ E+ + G D R
Sbjct: 186 IRASVRAGAILGGADEEAFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGSDQARG 245
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KATYP LVG++ SK+ A+EL+ A L FD RA PL + ++IV
Sbjct: 246 KATYPALVGLEASKRRAEELVQIALTALEPFD-ERAEPLRAIASYIV 291
>gi|115473007|ref|NP_001060102.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|33146837|dbj|BAC79826.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|50509220|dbj|BAD30490.1| putative geranylgeranyl diphosphate synthase [Oryza sativa Japonica
Group]
gi|113611638|dbj|BAF22016.1| Os07g0580900 [Oryza sativa Japonica Group]
gi|215767933|dbj|BAH00162.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768308|dbj|BAH00537.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 195/298 (65%), Gaps = 23/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F N Y KA +N ALD ++P PA LHEAMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 64 FDFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVVGG 123
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+L AL L+
Sbjct: 124 REAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLS 183
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 184 FHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTETVPLER 243
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G I+GGG++E+IE +R + + +G+ +Q+ +DI+DV S E
Sbjct: 244 LEYIHLHKTAALLEASVVIGAILGGGSDEQIESLRMYARSIGLLFQVVDDILDVTKSSEE 303
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DK TYPKL+G++ S++ A++L+++A+++L+ FD AAPL HL N+I
Sbjct: 304 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYI 361
>gi|242050680|ref|XP_002463084.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
gi|241926461|gb|EER99605.1| hypothetical protein SORBIDRAFT_02g037510 [Sorghum bicolor]
Length = 371
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 195/303 (64%), Gaps = 23/303 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N ALD A+P PA LH+AMRY+ L GGKR+ LC+A+C ++GG
Sbjct: 69 FDFKAYMGERAVAVNRALDAAIPAGEPPAALHDAMRYALLAGGKRVRPALCLAACAVVGG 128
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AM A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H V+GE A+LA AL L+
Sbjct: 129 PEAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLAGDALLSLS 188
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
H+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 189 FHHMASVGSYPPDVDPEKHPARVVRAIGELARCIGSEGLVAGQVVDLEMTGTSEPVPLER 248
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG +E+IER+R + + +G+ +Q+ +DI+DV S E
Sbjct: 249 LEYIHLHKTAALLEASVVIGAIIGGGTDEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 308
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KT G+D+ DK TYPKL+G++ S++ A++L+++A ++L FD +AAPL HL N+I
Sbjct: 309 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAIEQLDCFDKEKAAPLLHLANYIAH 368
Query: 291 FGN 293
N
Sbjct: 369 RQN 371
>gi|167037514|ref|YP_001665092.1| polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115928|ref|YP_004186087.1| polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|326390206|ref|ZP_08211767.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392941055|ref|ZP_10306699.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
gi|166856348|gb|ABY94756.1| Polyprenyl synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929019|gb|ADV79704.1| Polyprenyl synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|325993854|gb|EGD52285.1| Polyprenyl synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|392292805|gb|EIW01249.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
siderophilus SR4]
Length = 294
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 180/294 (61%), Gaps = 19/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
++ E + L K+++ LD P I++EAMRYS GGKRL LC++SCE++GG
Sbjct: 5 KLREKQQLVEKELHRILDID---EKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL--- 130
A+ +ACAIEL+ T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA L L
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 131 -----AMQHIA----IIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A++H I+KA N I +A G +GI GQ++DI S+ E++ EL F+H HKT
Sbjct: 122 VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G IEAS+ +G I G EEEI +R + + +G A+Q+ +DI+DVIG E + +K G D
Sbjct: 182 GALIEASVCAGAYIAGATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDK 241
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K T+ + G++ S++ EL A + L F +A L L N+++ N
Sbjct: 242 EKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRFGE-KAEFLKELSNYLIERVN 294
>gi|414154704|ref|ZP_11411021.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453535|emb|CCO08925.1| Farnesyl diphosphate synthase [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 294
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 176/282 (62%), Gaps = 16/282 (5%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A+Q++EAL +P +PA+LHEAMRYS+ GGKRL L +A+ + +GG+ M +A
Sbjct: 11 ARQVDEALHNYLPPADAYPAVLHEAMRYSVFAGGKRLRPILVLAAAKAVGGNTDKIMPVA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK- 139
CA+EL+ T +++ DDLP +DNDD RRG+P+NHKV+GEATAIL AL LA + +A
Sbjct: 71 CALELIHTYSLVHDDLPAMDNDDYRRGRPTNHKVYGEATAILVGDALLTLAFELVARCGE 130
Query: 140 ----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
A+ I A GS G+ GQ++D+ SE K++ S L +IHRHKTG A++
Sbjct: 131 DCPPAAVNRVAREIAQAAGSRGLIGGQVVDLLSENKQIESSVLEYIHRHKTGALFRAAVR 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+G I+GG E ++ + + + +G+A+Q+ +D++D+ G ++ + G D+ K TYP
Sbjct: 191 AGAILGGAGEAQLAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKNQKVTYPS 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
L G+DG+++ A E EA L F P A L +++FI++
Sbjct: 251 LYGLDGARRMADEAAREAVTALNIFGP-EAEFLRLMMHFIIN 291
>gi|116748856|ref|YP_845543.1| polyprenyl synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116697920|gb|ABK17108.1| farnesyl-diphosphate synthase [Syntrophobacter fumaroxidans MPOB]
Length = 296
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/292 (39%), Positives = 181/292 (61%), Gaps = 18/292 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLP---HPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
F + Y A + + + +AL++ P+P ++L EA RYSL GGKRL LC+A+ E+
Sbjct: 3 FDLKLYLAERKQLVEDALEDCFPVPSGLEKSVL-EAARYSLFAGGKRLRPILCLAAAEVA 61
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GGS+ AM ACA+E++ T ++I DDLP +DNDD RRGKP+NHKVFGEA A+LA AL
Sbjct: 62 GGSREAAMPAACALEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAVLAGDALLT 121
Query: 130 LAMQHIAIIKAK-----------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
A ++ + + A G G+ GQ++D+ E + V L+ + ++H H
Sbjct: 122 EAFDFVSKMDGDIPPRKILAVVATLVRASGYRGMIGGQVIDLECENRTVDLATVEYMHIH 181
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
KTG + AS+ G ++GGG++ ++ ++ +G ++G+A+Q+ +D++DV G + EM +K G
Sbjct: 182 KTGALLSASLEVGALLGGGSDAQVSSLKRYGHHLGLAFQITDDLLDVEGDAREMGKKPGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D ++K TYP L+GI S++ A+E + A Q LA FD RA PL + +++
Sbjct: 242 DAAKNKKTYPALLGITRSREAAREHVDAALQALAAFD-DRAEPLRAIARYLL 292
>gi|126659033|ref|ZP_01730174.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
gi|126619690|gb|EAZ90418.1| geranylgeranyl pyrophosphate synthase [Cyanothece sp. CCY0110]
Length = 309
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 190/297 (63%), Gaps = 21/297 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F + Y K + + ALD+++P+ P ++EAMRYSL GGKRL LC+ +CE++GG+
Sbjct: 17 FDLASYLKDKKQLVEAALDQSLPIIRPEKIYEAMRYSLLAGGKRLRPILCLTTCELMGGT 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++ ACA+E++ TM++I DDLP +D+DD RRGK +NHKV+GE AILA AL A
Sbjct: 77 VEMSLPTACALEMIHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDIAILAGDALLSYAF 136
Query: 133 QHIAIIKAKNINSA------------VGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHK 179
+++A + +N++ A VG+ G+ GQ++D+ SEGK +V++ L FIH HK
Sbjct: 137 EYVA-TQTRNVDLANLMNVIARLGRTVGAAGLVGGQVLDLESEGKLDVTVDTLKFIHIHK 195
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG +E S+VSG I+ G +E++ER+ + + +G+A+Q+ +DI+DV S E KT G+D
Sbjct: 196 TGALLETSVVSGAILAGAKQEDVERLSRYAQNIGLAFQIIDDILDVTASTEELGKTAGKD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFGN 293
KATYP L G++ S+K A+ LI +A +A DP A PL + FIV+ N
Sbjct: 256 QRDKKATYPSLWGLEESQKQAQALIDDA---IAQVDPYGQSAQPLKAIAQFIVARKN 309
>gi|260434296|ref|ZP_05788266.1| geranyltranstransferase [Synechococcus sp. WH 8109]
gi|260412170|gb|EEX05466.1| geranyltranstransferase [Synechococcus sp. WH 8109]
Length = 296
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 185/290 (63%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y +++ ALD ++ P L EAMRYSL GGKRL LC+A+CE+ GG
Sbjct: 5 FDFKAYLGKAKERVEAALDGSLGPERPESLREAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A+ A A+E++ TM++I DDLP +D+DDLRRG+P+NHKV+GEA AILA AL A
Sbjct: 65 ATQALPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ + V G+ G+ GQ++D+ SEGKEV L L +IH HKTG
Sbjct: 125 EMVALRSPDVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKEVDLETLEYIHLHKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G IIGG +E I+ +R + + +G+A+Q+ +DI+D+ S ++ KT G+D++
Sbjct: 185 ALLSACVITGAIIGGADEALIKALRTYARGIGLAFQIIDDILDITASSDVLGKTAGKDLI 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G+D S++ A L+ AK+ L + +A PL L +FI S
Sbjct: 245 ADKTTYPKLLGLDESRRRADALVNAAKEALQPW-AEKAIPLLALADFITS 293
>gi|345017599|ref|YP_004819952.1| polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032942|gb|AEM78668.1| Polyprenyl synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 294
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 179/294 (60%), Gaps = 19/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
++ E + L K+++ LD P I++EAMRYS GGKRL LC++SCE++GG
Sbjct: 5 KLREKQQLVEKELHRILDID---EKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL--- 130
A+ +ACAIEL+ T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA L L
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 131 -----AMQHIA----IIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A++H I+KA N I +A G +GI GQ++DI S+ E++ EL F+H HKT
Sbjct: 122 VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTELTYEELKFMHEHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G IEAS+ +G I EEEI +R + + +G A+Q+ +DI+DVIG E + +K G D
Sbjct: 182 GALIEASVCAGAYIASATEEEIHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDK 241
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K T+ + G++ S++ EL A + L F +A L L N+++ N
Sbjct: 242 EKGKFTFVNIFGLEKSQEMVVELTQNAIKILDRFGE-KAEFLKELSNYLIERVN 294
>gi|406871183|gb|EKD22087.1| hypothetical protein ACD_87C00167G0001 [uncultured bacterium]
Length = 302
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 180/302 (59%), Gaps = 24/302 (7%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLC 62
RND L Q+ EY A + I+ LD +P P ++ +A+RYSL GGKRL LC
Sbjct: 3 RNDEL----QLKEYLAGRKALIDATLDGLLPDEELCPPVIFQAVRYSLLAGGKRLRPILC 58
Query: 63 IASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAIL 122
+A+ E +GG + +ACA+E + T ++I DDLP +DNDD RRG+ + HKVFGE AIL
Sbjct: 59 LAAAEAVGGDSKTILPVACALEYIHTYSLIHDDLPAMDNDDYRRGRLTAHKVFGEDIAIL 118
Query: 123 A-----CQALHCLAM---------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVS 168
A +A H L ++I + A+ I +A G G+ GQ++D+ SEGK+V
Sbjct: 119 AGDALLTEAFHLLTRKELMPGIPPEYILTVTAE-IAAAAGWFGMVGGQVLDVRSEGKKVD 177
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
L L IHR KTG+ I S+ SG I+ G + E + ++G+ +G+A+Q+ +DI++V G
Sbjct: 178 LETLQQIHRLKTGELIRVSLRSGAILSGASTEMTASLSDYGRQIGLAFQIADDILNVEGD 237
Query: 229 PEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
+ K TG D R K T+P L+GI+ S+ HA+ LI EA + LA FD RAAPL + +
Sbjct: 238 RVLLGKQTGSDAARRKVTFPSLLGIEASRAHAESLIKEALKSLASFD-DRAAPLRLITGY 296
Query: 288 IV 289
I+
Sbjct: 297 IL 298
>gi|302773810|ref|XP_002970322.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
gi|300161838|gb|EFJ28452.1| hypothetical protein SELMODRAFT_231604 [Selaginella moellendorffii]
Length = 261
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 163/260 (62%), Gaps = 11/260 (4%)
Query: 43 LHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDND 102
+HEAMRY++ GG+R CIA+CE++GG+Q AM ACA+E++ +QDDLP +D+
Sbjct: 1 MHEAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60
Query: 103 DLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN--------INSAVGSEGIAA 154
+LR GKP+ H+ FG TA+ A AL L +H+A + + ++ A+GS G+ A
Sbjct: 61 ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVSRAIGSTGLLA 120
Query: 155 GQIMDINSEG--KEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYV 212
GQ +D+ E + V L L F+H HKT +EAS+V+G I GG +E+EIE +R +G+
Sbjct: 121 GQAVDLGIENPDRAVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVT 180
Query: 213 GMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
G+ YQ+ +D+ D + E+ + G+D M K+TY ++G+D S++ EL+ EAK+ L
Sbjct: 181 GLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGELLVEAKERLG 240
Query: 272 YFDPTRAAPLDHLVNFIVSF 291
F+ T+A PL HL N ++
Sbjct: 241 VFEETKALPLIHLANHFANW 260
>gi|390935023|ref|YP_006392528.1| polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570524|gb|AFK86929.1| Polyprenyl synthetase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 293
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 172/260 (66%), Gaps = 17/260 (6%)
Query: 23 KAKQINEALDEAVPLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
K + IN+ L+E + L P +L EAMRYS GGKRL LCI++CE++GG++ A+++A
Sbjct: 9 KIEYINKGLNEFLSLTDRPEVLFEAMRYSVFAGGKRLRPVLCISTCELVGGNKEDALAVA 68
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL-----HCLAMQHI 135
CAIE + T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA AL L Q +
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQAL 128
Query: 136 AIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
K++N I A G G+ AGQ++D+ SE +E+ + +L F+H HKTG I ASI
Sbjct: 129 NSSKSQNILKAADEIARAAGCRGMIAGQVVDLLSENREIGVDDLKFMHDHKTGALIRASI 188
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR--EKTGRDMMRDKATY 246
++G I+GG +++ ++++ ++ +Y+G A+Q+ +DI+D++G EM+ + G DM+ K+T+
Sbjct: 189 LAGAIMGGADDDTLKKLSSYAEYLGFAFQVKDDILDILGD-EMKIGKDIGSDMVNGKSTF 247
Query: 247 PKLVGIDGSKKHAKELIAEA 266
++G+ S EL +A
Sbjct: 248 VSVLGLQRSVDLINELTEKA 267
>gi|326494730|dbj|BAJ94484.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 199/298 (66%), Gaps = 23/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y +A +N ALD AVP PA LHEAMRY+ L GGKR+ LC+A+C + GG
Sbjct: 56 FDFKAYMGERAVAVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGG 115
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ AM+ A A+E++ TM+++ DDLPC+D+DDLRRGKP+ H +FGE A+LA AL LA
Sbjct: 116 REAWAMAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALA 175
Query: 132 MQHIA-----------------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSE 171
QH+A +++A + +GSEG+ AGQ++D+ G + V L
Sbjct: 176 FQHMASVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDR 235
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L +IH HKT +EAS+V G IIGGG+EE+IER+R + + +G+ +Q+ +DI+DV S E
Sbjct: 236 LEYIHLHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEE 295
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D+ DK TYPKL+G++ S++ A++L+++AK++LAYF+ +AAPL +L N+I
Sbjct: 296 LGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYLANYI 353
>gi|20807745|ref|NP_622916.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
gi|20516298|gb|AAM24520.1| Geranylgeranyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis MB4]
Length = 294
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/265 (43%), Positives = 168/265 (63%), Gaps = 16/265 (6%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P I++EAMRYS GGKRL LC+++CE++GG A+ +AC+IEL+ T ++I DDLP
Sbjct: 27 PEIIYEAMRYSVFAGGKRLRPVLCLSACELLGGDLKKALPVACSIELIHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKN-INS 145
+DNDDLRRGKP+NHKVFGEA AILA L L + + I+KA N I +
Sbjct: 87 MDNDDLRRGKPTNHKVFGEAIAILAGDGLLNLGYEVLIRHALENPEDYEKILKAANEIAT 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
A G +GI GQ+ DI S+ E++ EL +IH HKT IEAS+ +G + G +E+E+E +
Sbjct: 147 ASGCKGIIGGQVEDILSQNTELTYEELKYIHEHKTAALIEASVCAGAHMAGASEKEVELL 206
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
R + +G+A+Q+ +DI+DVIG + + +K G D + K T+ + G++ S++ KEL
Sbjct: 207 REYAGLIGLAFQIKDDILDVIGDEKTLGKKVGSDREKGKFTFVNIFGVEKSQEMVKELTD 266
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIV 289
EA + L F RA L L N+++
Sbjct: 267 EAIKILDTFGE-RAQFLKDLSNYLI 290
>gi|254431687|ref|ZP_05045390.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
gi|197626140|gb|EDY38699.1| polyprenyl synthetase [Cyanobium sp. PCC 7001]
Length = 321
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 14/294 (4%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
P F Y ++ ALD A+ P L EAMRYSL GGKRL LC+A+CE+
Sbjct: 25 PAGFDFPAYLEAARLRVEAALDAALGPERPESLREAMRYSLLAGGKRLRPILCLAACELA 84
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG AM A A+E++ TM++I DDLP +D+DDLRRG+P+NHKV+GEA AILA AL
Sbjct: 85 GGESERAMPTAVALEMIHTMSLIHDDLPAMDDDDLRRGRPTNHKVYGEANAILAGDALLT 144
Query: 130 LAMQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
A + +A+ + ++ A G+ G+ GQ++D+ EGK V L L +IH H
Sbjct: 145 RAFEMVALRSSGVPPERLLAVVGELSLASGAPGLVGGQVVDLECEGKTVDLDTLEYIHLH 204
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG + A ++ G +I G + + +R + + +G+A+Q+ +DI+DV S E+ KT G+
Sbjct: 205 KTGALLRACVLCGALIAGAPDALLTALRTYARGIGLAFQIIDDILDVTASSEVLGKTAGK 264
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP-TRAAPLDHLVNFIVS 290
D+ DK TYPKL+G++ S++ A+ L+ EAK+ LA F RAAPL L ++I S
Sbjct: 265 DLTADKTTYPKLLGLEESRQRAQALVLEAKEALAPFAAGGRAAPLLALADYITS 318
>gi|126030919|pdb|2J1O|A Chain A, Geranylgeranyl Diphosphate Synthase From Sinapis Alba
Length = 268
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 173/288 (60%), Gaps = 48/288 (16%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
Y KA +N+ALD AVPL P +HEAMRYSL GGKR+ LCIA+CE++GG +S+AM
Sbjct: 16 YIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAM 75
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA- 136
ACA+E++ TM++I DD V+GE A+LA AL A +H+A
Sbjct: 76 PAACAVEMIHTMSLIHDD------------------VYGEDVAVLAGDALLSFAFEHLAS 117
Query: 137 ----------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+++A + A+G+EG+ AGQ++DI++ V L L FIH HKT +E
Sbjct: 118 ATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISN----VGLEHLKFIHLHKTAALLE 173
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKAT 245
AS V G IIGGG++EEIER+R F + +G+ +Q+ +DI+DV + DK T
Sbjct: 174 ASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDV-------------TIADKLT 220
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
YPKL+G++ S++ A++L EA+ +L FD + APL L N+I + N
Sbjct: 221 YPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 268
>gi|83590356|ref|YP_430365.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
gi|83573270|gb|ABC19822.1| farnesyl-diphosphate synthase [Moorella thermoacetica ATCC 39073]
Length = 297
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 177/293 (60%), Gaps = 16/293 (5%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
K ++ Y A + + + EAL +P P +P +H+AM YSL GGKRL L +A+ E
Sbjct: 2 KTTELESYLAERRQLVQEALARNLPPPDTYPPAVHQAMHYSLFAGGKRLRPILVLAAGEA 61
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+G + ACA+E + T ++I DDLP +DNDD RRG+P+ HKV+GEA A+LA AL
Sbjct: 62 VGSQPEPLLPAACAVEFIHTYSLIHDDLPAMDNDDYRRGRPTCHKVYGEAIALLAGDALL 121
Query: 129 CLAMQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA + ++ I A + + ++ GS+G+ GQ++D+ +EG+ V+L ++N+IH
Sbjct: 122 TLAFEVLSRIPATIPPERILRATRELAASAGSQGLIGGQVVDMEAEGQPVTLEKVNYIHN 181
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTG 236
HKTG I A + G I+GG EE++ + +G+ +G+A+Q+ +DI+D+ G + ++ G
Sbjct: 182 HKTGSLIRACLRLGGILGGAGEEQLALLTRYGEALGLAFQITDDILDITGDFSQTGKQGG 241
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D R KATYP +G++ S++ A EL AEA P A PL+ L F++
Sbjct: 242 VDAARGKATYPACLGVEASRQKAGELCAEAGALARALGPA-AEPLELLAGFVL 293
>gi|343469128|gb|AEM43805.1| geranylgeranyl diphosphate synthase [Castanea mollissima]
Length = 213
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 148/207 (71%), Gaps = 13/207 (6%)
Query: 88 TMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK-----AKN 142
TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL A +HIA+ A+
Sbjct: 4 TMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVGVPPARV 63
Query: 143 INS------AVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIVSGVIIG 195
I + ++G+EG+ AGQ++DI SEG +V L L FIH HKT +EA++V G I+G
Sbjct: 64 IGAVGELARSIGTEGLVAGQVVDICSEGLSDVGLEHLEFIHLHKTAALLEAAVVLGAILG 123
Query: 196 GGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLVGIDG 254
GG+ EE+E++RNF +Y+G+ +Q+ +DI+DV S E+ + G+D++ DK TYPKL+GI+
Sbjct: 124 GGSHEEVEKLRNFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKTTYPKLMGIEK 183
Query: 255 SKKHAKELIAEAKQELAYFDPTRAAPL 281
SK+ A +L +A+ +L+ FDP +AAPL
Sbjct: 184 SKEFADKLNKDAQDQLSGFDPEKAAPL 210
>gi|451982552|ref|ZP_21930861.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
gi|451760198|emb|CCQ92154.1| Geranylgeranyl pyrophosphate synthase homolog [Nitrospina gracilis
3/211]
Length = 296
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 172/285 (60%), Gaps = 22/285 (7%)
Query: 26 QINEALDEAVPL------PHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMS 78
+ E +DEA+PL +P +HE+M YSL GGKRL TL IA+ E +GGS+ +
Sbjct: 9 ECKEYIDEAIPLFLPEPDTYPVSIHESMHYSLSAGGKRLRPTLLIAATEAVGGSRKDVLP 68
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL-------- 130
A A E L T +I DDLP LDND LRRGKP+NHKVFGEA AILA AL
Sbjct: 69 FAVAAEFLHTYTLIHDDLPALDNDSLRRGKPTNHKVFGEAIAILAGDALLTQAFVLMTNA 128
Query: 131 ----AMQHIAIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
A+ H I++A + + A+ S G+ GQ++D+ SEGK + S L +IH +KTG F +
Sbjct: 129 FLMEAIPHENILRASHEMAQALSSTGVIGGQVVDLESEGKPIEASTLEYIHIYKTGFFFK 188
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKA 244
+ + G I+G + +++ + FG ++G+A+Q+ +DI+D++G ++ + G D+ ++KA
Sbjct: 189 SCVRVGAILGRADSQQLGAISRFGAHIGLAFQIIDDILDIVGDKAKIGKDVGSDVSKNKA 248
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TYP L G++ S+K A L+ EA L FD RA PL + F V
Sbjct: 249 TYPALFGLEESRKKADSLVEEAITCLKDFD-ERANPLRDIALFFV 292
>gi|37519985|ref|NP_923362.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
gi|35210977|dbj|BAC88357.1| geranylgeranyl pyrophosphate synthase [Gloeobacter violaceus PCC
7421]
Length = 295
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 178/289 (61%), Gaps = 14/289 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F ++ Y Q+ ALD +P +P L+EAMRYSL GGKRL LC+ SC M GGS
Sbjct: 4 FDLDAYLRQCRSQVEAALDRYLPQQYPDKLYEAMRYSLLAGGKRLRPILCLTSCRMSGGS 63
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+AM ACA+E++ TM++I DDLP +D+DD RRGK +NHKV+GE AILA AL A
Sbjct: 64 ADLAMPTACALEMVHTMSLIHDDLPAMDDDDYRRGKLTNHKVYGEDMAILAGDALLAYAF 123
Query: 133 QHIA--IIKAK---------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q IA + A+ + A G+ GQ++D+ SEG+ ++L L +IH HKTG
Sbjct: 124 QLIAEKTVGAQPERVVEVLGRLGKAASGAGLVGGQVVDLESEGRTITLETLEYIHTHKTG 183
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMM 240
+E S++SG I+ G + +ER+ + + +G+A+Q+ +D++D+ + E+ + G+D+
Sbjct: 184 ALLEVSVISGAILAGADGGVVERLTRYSRCIGLAFQIRDDLLDITATQAELGKTAGKDLR 243
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KATYP L+G DG++ A++L +A ELA F + A PL L FIV
Sbjct: 244 DRKATYPSLLGYDGARDRAEQLREQAVAELADFGAS-ARPLTALAEFIV 291
>gi|325294212|ref|YP_004280726.1| polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064660|gb|ADY72667.1| Polyprenyl synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 294
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/286 (42%), Positives = 180/286 (62%), Gaps = 14/286 (4%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQS 74
+ E KA+ ++I + L +VP P L+EA++YSL GGKRL LC+A CE++GG+
Sbjct: 7 LKERKAIIDREILKYL-PSVP-PFGKRLYEAVKYSLTVGGKRLRPILCMAGCEVVGGNYE 64
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
A++ ACAIE++ T ++I DDLP +DND LRRG P+ F EATAILA AL A +
Sbjct: 65 EALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWYKFDEATAILAGDALLNRAFEV 124
Query: 135 IA---------IIKAKNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFI 184
++ I + I+ A G G+ GQ D+++EG K+V+L EL FIHRHKTG+ I
Sbjct: 125 LSQWNFDCDRKIKVIEEISKASGMLGMVLGQQCDMDAEGRKDVTLEELLFIHRHKTGRLI 184
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDK 243
AS+VSG I GGG+EEEI ++ +G +G+A+Q+ +D++DVIG ++ + G D+ + K
Sbjct: 185 TASVVSGGITGGGSEEEIGTLKKYGDSIGLAFQIIDDVLDVIGDQNKIGKNVGSDLEKGK 244
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
T+ G+DG+K+ A+E I +A L F + L L +FIV
Sbjct: 245 VTFVTFFGVDGAKRKAREEIEKAISALELFPAKKNELLKKLAHFIV 290
>gi|167040176|ref|YP_001663161.1| polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300914259|ref|ZP_07131575.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307724505|ref|YP_003904256.1| polyprenyl synthetase [Thermoanaerobacter sp. X513]
gi|166854416|gb|ABY92825.1| Polyprenyl synthetase [Thermoanaerobacter sp. X514]
gi|300889194|gb|EFK84340.1| Polyprenyl synthetase [Thermoanaerobacter sp. X561]
gi|307581566|gb|ADN54965.1| Polyprenyl synthetase [Thermoanaerobacter sp. X513]
Length = 294
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/294 (41%), Positives = 178/294 (60%), Gaps = 19/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
++ E + L K+++ LD P I++EAMRYS GGKRL LC++SCE++GG
Sbjct: 5 KLREKQQLVEKELHRILDIE---EKPEIIYEAMRYSVFAGGKRLRPVLCLSSCELLGGDI 61
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL--- 130
A+ +ACAIEL+ T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA L L
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLGYE 121
Query: 131 -----AMQHIA----IIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A++H I+KA N I +A G +GI GQ++DI S+ +++ EL FIH HKT
Sbjct: 122 VLVRHALEHPEDYERILKATNEIATASGCKGIIGGQVVDILSQNTKLTYEELKFIHEHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
IEAS+ +G I G EE++ +R + + +G A+Q+ +DI+DVIG E + +K G D
Sbjct: 182 AALIEASVCAGAYIAGATEEDVHALREYARLIGFAFQIKDDILDVIGEEEKLGKKVGSDR 241
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K T+ + ++ S++ EL A + L F +A L L N+++ N
Sbjct: 242 EKGKFTFVNIFELEKSQEMVVELTQNAVKILDRFGE-KALFLKELSNYLIERVN 294
>gi|304316765|ref|YP_003851910.1| polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778267|gb|ADL68826.1| Polyprenyl synthetase [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 293
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/266 (42%), Positives = 171/266 (64%), Gaps = 15/266 (5%)
Query: 23 KAKQINEALDEAVPLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
K + IN L++ + + P IL++AMRYS GGKRL LCI+SCE++GG + A+ +A
Sbjct: 9 KIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDALPVA 68
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL----------HCL 130
CAIE + T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA AL H L
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHAL 128
Query: 131 AMQHIA-IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
+ I++A + I A G G+ GQ++D+ SE K ++ EL F+H HKTG I+AS+
Sbjct: 129 DSANCQNILRATEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGALIKASV 188
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYP 247
V+G I+GG ++E I+++ ++ +Y+G+A+Q+ +DI+DV+G ++ + D+ K+T+
Sbjct: 189 VAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGDESKLGKNVKSDLENGKSTFV 248
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYF 273
+ G+ S KEL A A + L F
Sbjct: 249 SVFGLQRSISLVKELTASAIRILDDF 274
>gi|134298940|ref|YP_001112436.1| polyprenyl synthetase [Desulfotomaculum reducens MI-1]
gi|134051640|gb|ABO49611.1| farnesyl-diphosphate synthase [Desulfotomaculum reducens MI-1]
Length = 294
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 177/282 (62%), Gaps = 16/282 (5%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
+++++EALD +P +P+++HEAMRYS+ GGKRL L +A+ + +GG+ M +A
Sbjct: 11 SQKVDEALDRYIPSSDAYPSVIHEAMRYSIFAGGKRLRPILVLAATQAVGGNTEKVMPVA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---- 136
CA+EL+ T +++ DDLP +DNDD RRG+P+NHKV+GEA AIL AL LA + IA
Sbjct: 71 CAMELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALQTLAFELIAQTTE 130
Query: 137 IIKAKNINS-------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+A +N A GS G+ GQ++DI SE +++ L +IHRHKTG ASI
Sbjct: 131 SFEADRVNQVTLEIAKAAGSSGLIGGQVVDILSENRDIDGDTLEYIHRHKTGALFRASIR 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+G I+GG ++ + + + +G+A+Q+ +D++D+ G ++ + G D+ K+TYP
Sbjct: 191 AGAILGGATVNQLAALTLYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDIKNQKSTYPS 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ GI+ +K+ A E AEA + F+ +A L +++FI++
Sbjct: 251 IYGIEEAKRMATEAAAEAVNAIKIFN-HKAEFLQDIMHFIIN 291
>gi|302769336|ref|XP_002968087.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
gi|300163731|gb|EFJ30341.1| hypothetical protein SELMODRAFT_231100 [Selaginella moellendorffii]
Length = 261
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 162/260 (62%), Gaps = 11/260 (4%)
Query: 43 LHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDND 102
+H+AMRY++ GG+R CIA+CE++GG+Q AM ACA+E++ +QDDLP +D+
Sbjct: 1 MHDAMRYAVGGGRRTCPIACIAACELVGGTQDDAMPGACALEMIKASFCVQDDLPSIDDS 60
Query: 103 DLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN--------INSAVGSEGIAA 154
+LR GKP+ H+ FG TA+ A AL L +H+A + + + A+GS G+ A
Sbjct: 61 ELRHGKPTVHRAFGIPTALFAGTALLALGFEHLAARYSGDTAARMVAEVGRAIGSTGLLA 120
Query: 155 GQIMDINSEGKE--VSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYV 212
GQ +D+ E + V L L F+H HKT +EAS+V+G I GG +E+EIE +R +G+
Sbjct: 121 GQAVDLGIENPDRGVELETLEFVHLHKTSALLEASLVAGAIAGGASEQEIEALRAYGRVT 180
Query: 213 GMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
G+ YQ+ +D+ D + E+ + G+D M K+TY ++G+D S++ +L+ EAK+ L
Sbjct: 181 GLLYQIVDDVADATKTMEELGKIPGQDAMAGKSTYSTILGVDKSREMVGQLLVEAKERLG 240
Query: 272 YFDPTRAAPLDHLVNFIVSF 291
F+ T+A PL HL + ++
Sbjct: 241 VFEETKALPLIHLADHFANW 260
>gi|125569734|gb|EAZ11249.1| hypothetical protein OsJ_01102 [Oryza sativa Japonica Group]
Length = 219
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 145/214 (67%), Gaps = 14/214 (6%)
Query: 89 MAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------ 136
M++I DD+PC+D+D LRRG+PSNH FGE TA+LA ALH LA +H+A
Sbjct: 1 MSLIHDDMPCMDDDALRRGRPSNHVAFGEFTALLAGDALHALAFEHVARGCGDHGVPADR 60
Query: 137 -IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG 195
+ + SA G+ G+AAGQ+ D SEG VSL+ L +IH HKT + +EA+ VSG I+G
Sbjct: 61 TLRAVAELGSASGTGGVAAGQVADKESEGLPVSLAMLEYIHVHKTARLLEAAAVSGAIVG 120
Query: 196 GGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDG 254
GG + E+ER+R + + VG+ +Q+ +D++D+ + E KT G+D+ DKATYPKL+G+D
Sbjct: 121 GGADAEVERVRRYARCVGLLFQVVDDVLDMTSTSEQLGKTAGKDVEADKATYPKLLGVDK 180
Query: 255 SKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++++A +L+A A+ EL FD RAAPL HL FI
Sbjct: 181 AREYAADLLAMAEAELDGFDAERAAPLRHLARFI 214
>gi|433654909|ref|YP_007298617.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293098|gb|AGB18920.1| geranylgeranyl pyrophosphate synthase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 293
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/269 (42%), Positives = 172/269 (63%), Gaps = 21/269 (7%)
Query: 23 KAKQINEALDEAVPLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
K + IN L++ + + P IL++AMRYS GGKRL LCI+SCE++GG + A+ +A
Sbjct: 9 KIEYINNGLNKLLDIDDKPEILYDAMRYSVFAGGKRLRPVLCISSCELVGGDRDDALPVA 68
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL----------HCL 130
CAIE + T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA AL H L
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEALAILAGDALLNYGFEVLIHHAL 128
Query: 131 AMQHIA-IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
+ I++A + I A G G+ GQ++D+ SE K ++ EL F+H HKTG I+AS+
Sbjct: 129 DSANCQNILRAIEEIAHAAGCHGMIGGQVVDLLSENKNITEEELKFMHDHKTGALIKASV 188
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KA 244
V+G I+GG ++E I+++ ++ +Y+G+A+Q+ +DI+DV+G K G+++ D K+
Sbjct: 189 VAGAIMGGADDETIKKLSDYAEYIGLAFQIKDDILDVLGD---ESKLGKNVKSDSENGKS 245
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYF 273
T+ + G+ S KEL A A + L F
Sbjct: 246 TFVSVFGLQRSISLVKELTASAIRILDDF 274
>gi|116071037|ref|ZP_01468306.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
gi|116066442|gb|EAU72199.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. BL107]
Length = 296
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 183/290 (63%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y + + ALD+++ P L +AMRYSL GGKRL LC+A+CE+ GG
Sbjct: 5 FDFKAYLGKAKETVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGD 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A A+E++ TM++I DDLP +D+DD+RRG+P+NHKV+GEA AILA AL A
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A + V G+ G+ GQ++D+ SEGK+V L L +IH HKTG
Sbjct: 125 EMVALRSPGVPADQLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G +IG ++ I +R + + +G+A+Q+ +DI+D+ S E+ KT G+D++
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G++ S+K A +L+ EAK+ L + +A PL L +FI S
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPWS-DQAMPLLALADFITS 293
>gi|78184316|ref|YP_376751.1| geranylgeranyl pyrophosphate synthase [Synechococcus sp. CC9902]
gi|78168610|gb|ABB25707.1| farnesyl-diphosphate synthase [Synechococcus sp. CC9902]
Length = 296
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 183/290 (63%), Gaps = 14/290 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y + ALD+++ P L +AMRYSL GGKRL LC+A+CE+ GG
Sbjct: 5 FDFKAYLGKAKDTVEAALDDSLGPERPESLRDAMRYSLLAGGKRLRPILCLAACELAGGE 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A A+E++ TM++I DDLP +D+DD+RRG+P+NHKV+GEA AILA AL A
Sbjct: 65 AKHAVPTAVALEMIHTMSLIHDDLPAMDDDDVRRGRPTNHKVYGEAVAILAGDALLTRAF 124
Query: 133 QHIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A+ + A+ + V G+ G+ GQ++D+ SEGK+V L L +IH HKTG
Sbjct: 125 EMVALRSPGVPAERLLKVVGELSLVAGAPGLVGGQVVDLESEGKQVDLETLEYIHLHKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ A +++G +IG ++ I +R + + +G+A+Q+ +DI+D+ S E+ KT G+D++
Sbjct: 185 ALLSACVITGALIGNADDTLITALRTYARGIGLAFQIIDDILDITASSEVLGKTAGKDLL 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
DK TYPKL+G++ S+K A +L+ EAK+ L + +A PL L +FI S
Sbjct: 245 ADKTTYPKLLGLEESRKRADDLVREAKEALQPWS-EQAMPLLALADFITS 293
>gi|449017049|dbj|BAM80451.1| geranylgeranyl diphosphate synthase, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 388
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 179/292 (61%), Gaps = 21/292 (7%)
Query: 18 EYKALKAKQINEALDEAVPLPHP--AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
E+ K I+ AL++AV A L EAMRYSL GGKR+ L +A+C M GG
Sbjct: 94 EFLLAKRASIDAALNDAVQATSVMNARLAEAMRYSLLAGGKRVRPALVLAACRMFGGVDE 153
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
AM A A+E++ TM++I DDLP +DNDD RRG+P+NHKV+GE AILA AL A
Sbjct: 154 QAMPTAVAVEMVHTMSLIHDDLPAMDNDDFRRGRPTNHKVYGEEVAILAGDALLSEAFSQ 213
Query: 135 IA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGK---EVSLSELNFIHRH 178
IA + + + + VG G+AAGQ +D+ +EGK E+SL L IH +
Sbjct: 214 IAEKTPATLVPPSRTLEVIRRLGNCVGLHGLAAGQALDLEAEGKPADEISLRMLETIHLY 273
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KT + SI +G I+ G + ++I+ M +F +G+A+Q+ +D++DV + E KT G+
Sbjct: 274 KTAALLRFSITAGAILAGASVDDIDCMESFANKIGLAFQVADDVLDVTATTETLGKTAGK 333
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ +KAT+P+++G++ S+K+A++L+ EAK ELA + RA+ L +FI+
Sbjct: 334 DVAAEKATFPRILGLEESRKYAEDLVKEAKGELAKYG-DRASLLLGFADFII 384
>gi|289578292|ref|YP_003476919.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
gi|289528005|gb|ADD02357.1| Geranyltranstransferase [Thermoanaerobacter italicus Ab9]
Length = 294
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 178/294 (60%), Gaps = 19/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
Q+ E + L K+++ L+ +P I++EAM+YS+ GGKRL LC++SCE+ G
Sbjct: 5 QLKEKQQLIEKELHRILEVE---ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+ +ACAIEL+ T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA L LA +
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 134 ------------HIAIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ I+KA N I A G +G+ GQ++DI S+ +++ EL F+H HKT
Sbjct: 122 VLIRHALENPHDYQRILKATNEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G IEAS+ +G I G EE+I +R + +G+A+Q+ +DI+DVIG E + +K G D
Sbjct: 182 GALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDR 241
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K T+ + G+ S++ EL +A + L F +A L L N+++ N
Sbjct: 242 EKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFGE-KALFLKELSNYLIERVN 294
>gi|77176929|gb|ABA64563.1| geranylgeranyl pyrophosphate synthase [Carica papaya]
Length = 214
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 151/211 (71%), Gaps = 13/211 (6%)
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------- 136
E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA AL + +H+A
Sbjct: 1 EMMHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFSFEHLAVATVGVD 60
Query: 137 ---IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIVSG 191
I++A K + ++G+EG+ AGQ++DI SEG +V L L FIH HKT +EA++V G
Sbjct: 61 PSRIVRAIKELAKSIGTEGLVAGQVVDICSEGMTDVGLEHLEFIHVHKTAALLEAAVVLG 120
Query: 192 VIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKATYPKLV 250
I+GGG +EEIE++R F +Y+G+ +Q+ +DI+DV S E+ + G+D++ +K TYPKL+
Sbjct: 121 AILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVAEKVTYPKLM 180
Query: 251 GIDGSKKHAKELIAEAKQELAYFDPTRAAPL 281
GI+ S++ A++L +A+++L FD +AAPL
Sbjct: 181 GIEKSRELAEKLNKDAQEQLRDFDEEKAAPL 211
>gi|319788992|ref|YP_004150625.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
gi|317113494|gb|ADU95984.1| Polyprenyl synthetase [Thermovibrio ammonificans HB-1]
Length = 294
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 179/289 (61%), Gaps = 20/289 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI---LHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
+ E KAL I+ L +P P P L+EA++YSL GGKRL LC+A CE++GG
Sbjct: 7 LKERKAL----IDSVLLTYLP-PEPEFGKKLYEAVKYSLTVGGKRLRPILCLAGCEIVGG 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+++ A++ ACAIE++ T ++I DDLP +DND LRRG P+ FGEATAILA AL A
Sbjct: 62 NRNDALTPACAIEMIHTYSLIHDDLPAMDNDTLRRGHPTTWVKFGEATAILAGDALLNRA 121
Query: 132 MQHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTG 181
+ +A + I A G G+ GQ D+++EG+ +V L EL FIH+HKTG
Sbjct: 122 FEVLADWEFDCNRKVKVISEIARASGMLGMVLGQQCDLDAEGRGDVPLEELLFIHKHKTG 181
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
+ I AS+VSG I GGG+ EEI+ +R +G +G+A+Q+ +D++DV+G E + + G D+
Sbjct: 182 RLITASVVSGGITGGGSPEEIDALRRYGDSLGLAFQIIDDVLDVVGDQEKLGKNVGSDLE 241
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ K T+ + G++ ++K A E + A + L+ F + PL+ + F+V
Sbjct: 242 KGKTTFVTIFGVEKARKMAYEEVERAVEALSIFPAEKREPLEAIARFVV 290
>gi|239827666|ref|YP_002950290.1| polyprenyl synthetase [Geobacillus sp. WCH70]
gi|239807959|gb|ACS25024.1| Polyprenyl synthetase [Geobacillus sp. WCH70]
Length = 297
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 162/265 (61%), Gaps = 19/265 (7%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q + L+E++P L P + AM YSL GGKR+ L A+ G + +
Sbjct: 11 QQQKQRLEESLPHYIARLNAPGTIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLP 70
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
+ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA L A Q IA
Sbjct: 71 VACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEM 130
Query: 137 ----IIKAKNIN------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I+ A I A G EG+ AGQ+ DI EGK++SL +L +IHRHKTGK ++
Sbjct: 131 SDARIVPATKIRLIEELAKAAGPEGMVAGQVADIEGEGKQLSLEQLEYIHRHKTGKMLQY 190
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
S+++G ++ +E++ + F ++G+A+Q+ +DI+D+ GS E + ++ G D+ K T
Sbjct: 191 SVLAGALLADAKDEQLHHLHTFASHLGLAFQIRDDILDIEGSEEKIGKRVGSDIENKKVT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQEL 270
YP L+ I G+K+ IAEAK+ L
Sbjct: 251 YPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|297544572|ref|YP_003676874.1| polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842347|gb|ADH60863.1| Polyprenyl synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 294
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 19/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
Q+ E + L K+++ L+ +P I++EAM+YS+ GGKRL LC++SCE+ G
Sbjct: 5 QLKEKQQLIEKELHRILEVE---ENPQIIYEAMKYSVFAGGKRLRPVLCLSSCELFEGDI 61
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+ +ACAIEL+ T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA L LA +
Sbjct: 62 KKALPVACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDGLLNLAFE 121
Query: 134 ------------HIAIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ I+KA + I A G +G+ GQ++DI S+ +++ EL F+H HKT
Sbjct: 122 VLIRHALENPHDYQRILKATDEIARASGCKGMIGGQVVDILSQNTKLTYEELKFMHEHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G IEAS+ +G I G EE+I +R + +G+A+Q+ +DI+DVIG E + +K G D
Sbjct: 182 GALIEASVCAGAYIAGAIEEDIHALREYASLIGLAFQIKDDILDVIGEEEKLGKKVGSDR 241
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ K T+ + G+ S++ EL +A + L F +A L L N+++ N
Sbjct: 242 EKGKVTFVNIFGLKKSQQMVVELTQKAIEILDRFGE-KALFLKELSNYLIERVN 294
>gi|333897019|ref|YP_004470893.1| polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112284|gb|AEF17221.1| Polyprenyl synthetase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 293
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 167/259 (64%), Gaps = 15/259 (5%)
Query: 23 KAKQINEALDEAVPLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
K + IN+ L+E + L P +L EAM+YS GGKRL LCI++CE++GG++ A+ +A
Sbjct: 9 KIEYINKGLNEFLSLTDRPEVLFEAMKYSVFAGGKRLRPVLCISACELVGGNKEDALPVA 68
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL-----HCLAMQHI 135
CAIE + T ++I DDLP +DNDDLRRGKP+NHKV+GEA AILA AL L Q +
Sbjct: 69 CAIEFIHTYSLIHDDLPAMDNDDLRRGKPTNHKVYGEAIAILAGDALLNYGFEVLIQQAL 128
Query: 136 AIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
K++N I A G G+ AGQ++D+ SE KE+ +L F+H HKTG I+ASI
Sbjct: 129 NSNKSQNILKAADEIARAAGCRGMIAGQVVDLLSENKEIGEYDLKFMHDHKTGALIKASI 188
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYP 247
++G IIGG + ++++ ++ +Y+G A+Q+ +DI+DV G ++ + G D+ K+T+
Sbjct: 189 LAGAIIGGADAATLKKLSSYAEYLGFAFQVKDDILDVQGDEAKLGKDIGSDIANGKSTFV 248
Query: 248 KLVGIDGSKKHAKELIAEA 266
++G+ S + EL +A
Sbjct: 249 SVLGLQRSVELVNELTEKA 267
>gi|312110282|ref|YP_003988598.1| polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
gi|311215383|gb|ADP73987.1| Polyprenyl synthetase [Geobacillus sp. Y4.1MC1]
Length = 297
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 161/265 (60%), Gaps = 19/265 (7%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q + L+ A+P + P + AM YSL GGKR+ L A+ G + +
Sbjct: 11 QQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLP 70
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
+ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA L A Q IA
Sbjct: 71 VACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEA 130
Query: 137 ----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I + + A G EG+ AGQ+ DI SEGK++SL +L +IHRHKTGK ++
Sbjct: 131 NDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQY 190
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
S+++G ++ N E++ ++ F ++G+A+Q+ +DI+D+ G E M ++ G DM K T
Sbjct: 191 SVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDMENKKVT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQEL 270
YP L+ I G+K+ IAEAK+ L
Sbjct: 251 YPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|212638788|ref|YP_002315308.1| geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
gi|212560268|gb|ACJ33323.1| Geranylgeranyl pyrophosphate synthase [Anoxybacillus flavithermus
WK1]
Length = 290
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 162/263 (61%), Gaps = 17/263 (6%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q E +++ +P L P + EAM YSL GGKR+ L +++ + MS
Sbjct: 6 RQYKEQIEQQLPAYIESLQAPQTIKEAMLYSLQAGGKRIRPLLLLSTLHAFRKPIDIGMS 65
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
+ACA+E++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA AL A Q +A
Sbjct: 66 VACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADD 125
Query: 139 KA----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
K + A G EG+ GQ+ D+ EGK +SL +L +IHRHKTGK ++ SI
Sbjct: 126 KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSI 185
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYP 247
+G I+G E+++ + F ++G+A+Q+ +DI+D+ G + + +K G D+ DK+TYP
Sbjct: 186 RAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYP 245
Query: 248 KLVGIDGSKKHAKELIAEAKQEL 270
L+ +DG+KK + + EA++ L
Sbjct: 246 SLLTLDGAKKKLYDHMKEARKLL 268
>gi|433444536|ref|ZP_20409408.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
gi|432001564|gb|ELK22439.1| polyprenyl synthetase [Anoxybacillus flavithermus TNO-09.006]
Length = 290
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/263 (40%), Positives = 162/263 (61%), Gaps = 17/263 (6%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q E +++ +P L P + EAM YSL GGKR+ L +++ + MS
Sbjct: 6 RQYKEQIEQQLPTYIESLQAPQTIKEAMLYSLRAGGKRIRPLLLLSTLHAFRKPIGIGMS 65
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
+ACA+E++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA AL A Q +A
Sbjct: 66 VACALEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEANAILAGDALLTYAFQVVADD 125
Query: 139 KA----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
K + A G EG+ GQ+ D+ EGK +SL +L +IHRHKTGK ++ S+
Sbjct: 126 KTISSDVKVRLISELAKAAGPEGMVGGQVADLEGEGKTISLQQLEYIHRHKTGKLLQYSV 185
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYP 247
+G I+G E+++ + F ++G+A+Q+ +DI+D+ G + + +K G D+ DK+TYP
Sbjct: 186 RAGAILGEATEQQLTLLTLFADHLGLAFQIRDDILDIEGDEQKIGKKVGSDIENDKSTYP 245
Query: 248 KLVGIDGSKKHAKELIAEAKQEL 270
L+ +DG+KK + + EA++ L
Sbjct: 246 SLLTLDGAKKKLSDHMKEARKLL 268
>gi|224284786|gb|ACN40123.1| unknown [Picea sitchensis]
Length = 369
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 175/290 (60%), Gaps = 18/290 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y K++ L+++VPL +P +H +MRYS+ KR +CIA+CE +GG
Sbjct: 78 FDLRRYWNSVRKEMEAELEKSVPLRYPEKIHVSMRYSVLAEKAKRGPPMMCIAACEAVGG 137
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S+ A+ ACA+E++ T ++I DDLPC+D+D +RRG+PSNH VFG A+LA AL L
Sbjct: 138 SKQQALPTACALEMVHTASLIHDDLPCMDDDPIRRGQPSNHTVFGVDMAVLAGDALFPLG 197
Query: 132 MQHIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHK 179
++I I+K I VGS+G+ GQ MD+ S G + S + FIH K
Sbjct: 198 FEYIVSSTSDVPPDRIVKVIAQIAKTVGSQGMVVGQYMDLGSTGNNKFDPSLVEFIHERK 257
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDM 239
G E S V+G IIGG +EE+ER+RN+G+ VG+ YQ+ +DI++ + E G +
Sbjct: 258 FGIMAECSAVTGGIIGGATDEEVERLRNYGRSVGVLYQIADDILE---EEALLEGNGV-I 313
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++K +YP+ G++ +++ A+ L + AK EL+ FD ++APL V++ +
Sbjct: 314 RKNKTSYPRAYGLEKAREIAETLRSNAKMELSGFDRGKSAPLYSFVDYAI 363
>gi|336234744|ref|YP_004587360.1| polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
gi|335361599|gb|AEH47279.1| Polyprenyl synthetase [Geobacillus thermoglucosidasius C56-YS93]
Length = 297
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 161/265 (60%), Gaps = 19/265 (7%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q + L+ A+P + P + AM YSL GGKR+ L A+ G + +
Sbjct: 11 QQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLP 70
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
+ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA L A Q IA
Sbjct: 71 VACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEA 130
Query: 137 ----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I + + A G EG+ AGQ+ DI SEGK++SL +L +IHRHKTGK ++
Sbjct: 131 DDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQY 190
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
S+++G ++ N E++ ++ F ++G+A+Q+ +DI+D+ G E M ++ G D+ K T
Sbjct: 191 SVLAGALLADANNEQLRQLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKVT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQEL 270
YP L+ I G+K+ IAEAK+ L
Sbjct: 251 YPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|423719308|ref|ZP_17693490.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
gi|383368211|gb|EID45486.1| geranyl/polyprenyl transtransferase [Geobacillus thermoglucosidans
TNO-09.020]
Length = 297
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 160/265 (60%), Gaps = 19/265 (7%)
Query: 25 KQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
+Q + L+ A+P + P + AM YSL GGKR+ L A+ G + +
Sbjct: 11 QQQKQRLENALPHYITRMAAPETIKRAMSYSLEAGGKRIRPLLLFATLHSFGKEPDIGLP 70
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
+ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA L A Q IA
Sbjct: 71 VACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQVIAEA 130
Query: 137 ----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I + + A G EG+ AGQ+ DI SEGK++SL +L +IHRHKTGK ++
Sbjct: 131 DDARISPMTKIRLIEELAKAAGPEGMVAGQVADIESEGKQLSLEQLEYIHRHKTGKMLQY 190
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
S+++G ++ N E++ + F ++G+A+Q+ +DI+D+ G E M ++ G D+ K T
Sbjct: 191 SVLAGALLADANNEQLRHLDLFASHLGLAFQIRDDILDIEGLEEKMGKRVGSDIENKKVT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQEL 270
YP L+ I G+K+ IAEAK+ L
Sbjct: 251 YPSLLTIAGAKEKLSFHIAEAKRYL 275
>gi|147677529|ref|YP_001211744.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
gi|146273626|dbj|BAF59375.1| geranylgeranyl pyrophosphate synthase [Pelotomaculum
thermopropionicum SI]
Length = 294
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 165/265 (62%), Gaps = 14/265 (5%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
KA + EAL+ +P P +P ++H AMRYS L GGKRL L +A E +GG+ + +
Sbjct: 11 KAALVEEALERYLPPPDAYPPLIHHAMRYSVLGGGKRLRPALVMAGAEAVGGNAADVLPA 70
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
ACA+EL+ T +++ DDLP +DNDD RRG+ +NHKV+GEA AILA AL LA + +A
Sbjct: 71 ACAVELIHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAAAILAGDALLTLAFELLANND 130
Query: 137 ------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
I++ + +A G+ G+ GQ++D S GKE+ S L +IHRHKTG S+
Sbjct: 131 RARPENIVRVIREAAAAAGTMGLIGGQVVDTFSAGKEIDESTLEYIHRHKTGALYRFSVR 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+G ++ G EE++ + + +++G+A+Q+ +DI+DV G ++ + G D+ K+TYP
Sbjct: 191 AGAMLAGAQEEQLASLTAYAEHLGLAFQIKDDILDVEGDEKKIGKPVGSDVRNRKSTYPS 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYF 273
L G++ S+K A++ + AK L F
Sbjct: 251 LFGMEYSRKKARQAVEMAKAALQPF 275
>gi|334341587|ref|YP_004546567.1| polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
gi|334092941|gb|AEG61281.1| Polyprenyl synthetase [Desulfotomaculum ruminis DSM 2154]
Length = 296
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 176/285 (61%), Gaps = 18/285 (6%)
Query: 23 KAKQINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG--GSQSVAM 77
+A+ ++EAL++ +P HPA++HEAMRYS+ GGKRL L +A+ E +G + AM
Sbjct: 10 RARLVDEALEKYLPPDHEHPAVIHEAMRYSVFAGGKRLRPILVLAAAEAVGDEAGAASAM 69
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
+ACA+EL+ T +++ DDLP +DNDD RRG+P+NHKV+GEA AILA AL A + +
Sbjct: 70 PVACALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILAGDALLTTAFELMGQ 129
Query: 138 IKAK-----------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
K I A GS+G+ GQ++D SE K+V S L +IHRHKTG A
Sbjct: 130 SAGKFSPQAVNRVVVEIAQAAGSQGLIGGQVVDTLSENKKVEASVLEYIHRHKTGALFRA 189
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
+I SG I+ G +EE+++ + + + +G+A+Q+ +D++D+ G E + + G D+ KAT
Sbjct: 190 AIRSGAILNGASEEQLQALTVYAEQMGLAFQIKDDLLDIEGEQEKIGKPVGSDVKNQKAT 249
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
YP L G++ ++K A EA L F P + L +++FI++
Sbjct: 250 YPALYGMEKARKMAGLAAEEAVAALKIFGP-KGEFLRSIMHFIIN 293
>gi|310658649|ref|YP_003936370.1| geranyltranstransferase [[Clostridium] sticklandii]
gi|308825427|emb|CBH21465.1| geranyltranstransferase [[Clostridium] sticklandii]
Length = 295
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 172/281 (61%), Gaps = 16/281 (5%)
Query: 25 KQINEA-LDE--AVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
KQI E +DE ++ + + L E+M+YS+ GGKRL L + + +++ + + +A
Sbjct: 11 KQIVEKYMDELLSINVIYEKKLIESMKYSVQAGGKRLRPILFLETIKLLNKNPFDFIEIA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ-HIAIIK 139
CAIE++ T ++I DDLP +DND LRRGKP+NH VFGEATAILA L LA + IA +
Sbjct: 71 CAIEMIHTYSLIHDDLPAMDNDSLRRGKPTNHVVFGEATAILAGDGLLNLAHEIMIAFVS 130
Query: 140 AK----------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
K I+ A G G+ AGQ +DI SEGK + + + FIH +KTG IEASIV
Sbjct: 131 KKLTKNNINGINIISKAAGINGMIAGQAVDIESEGKSIDIDTMKFIHSNKTGALIEASIV 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+ ++ ++ I ++ + KY+G+A+Q+ +DI+D+ G+ E+ +K G D + DKATYPK
Sbjct: 191 AAAVMSDADDTRIAALKTYAKYIGLAFQITDDILDIEGNEAELGKKIGSDELNDKATYPK 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
G++ SK++AK I A + L F+P L ++I+
Sbjct: 251 YFGLEKSKEYAKNTITNAIESLNVFEPREKTFFVELADYII 291
>gi|117924356|ref|YP_864973.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
gi|117608112|gb|ABK43567.1| farnesyl-diphosphate synthase [Magnetococcus marinus MC-1]
Length = 294
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 174/296 (58%), Gaps = 24/296 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIG 70
++ Y A + + ALD +P P L AMRYSL GGKRL L +A CE +G
Sbjct: 1 MELKPYLADRKYLVESALDRLLPAADREPRALTGAMRYSLLIGGKRLRPILTLACCEAVG 60
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
G+ AM+ ACA+E + T ++I DDLP +DNDDLRRG P+ H+ +GEATAILA AL
Sbjct: 61 GALERAMNFACAMECVHTYSLIHDDLPAMDNDDLRRGHPTCHRQYGEATAILAGDAL--- 117
Query: 131 AMQHIAIIKAKNINS---------------AVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
+ H + AK + A G+ G+ GQ++DI E + + L +L I
Sbjct: 118 -LTHAFELAAKPVTGVLPEARLELIGELAMAAGTYGMVGGQMLDIQGEKRPLELVQLQNI 176
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREK 234
H HKTG I + ++G +GGG ++++ ++ +G+ +G+A+Q+ +DI+D +G + + +
Sbjct: 177 HIHKTGALIRVACLAGARLGGGTPDQVKHLKRYGEALGLAFQITDDILDEVGDTKTLGKA 236
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
TG D DKATYPKL+G+ +++ A+ L+ EA + L F P +A PL L ++++
Sbjct: 237 TGVDRALDKATYPKLMGLAQAREAAENLMQEATRCLTEFGP-QADPLRALAQYVIA 291
>gi|375332057|gb|AFA52568.1| farnesyltransferase [Vaucheria litorea]
Length = 349
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 177/298 (59%), Gaps = 21/298 (7%)
Query: 14 FQVNEYKALKAKQINEALDEA-VPL-PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
F + +Y K +++AL E VP+ L E+M YSL GGKR+ LCIAS E+ G
Sbjct: 55 FDIKKYLYEKKVIVDKALSECIVPIGAENEKLCESMNYSLLAGGKRVRPILCIASSEIFG 114
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC- 129
G + A A+E++ +M+++ DDLP +DNDDLRRGKP+NH V+GEA AILA AL
Sbjct: 115 GEIESTLPTALALEMIHSMSLVHDDLPAMDNDDLRRGKPTNHVVYGEALAILAGDALLSK 174
Query: 130 ---LAMQHIAIIKAKNI-------NSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRH 178
+ +H + A+ + VG G+A GQ MD+ EGKE +L +L +IH+H
Sbjct: 175 SFEIVAKHTKGVDAERVVDVLARLGECVGEVGLAGGQAMDLELEGKEDTTLEQLRWIHKH 234
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG ++A+ +G ++GG E+E + F + +G+A+Q+ +DI+D + E KT G+
Sbjct: 235 KTGALLKAACTTGAVLGGAEPSEVEAIERFSESIGLAFQVADDILDCTQTSEQLGKTAGK 294
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFGN 293
D K TY KL+G+DG++K AK L+ +A LA +P +RA L + +FI+ N
Sbjct: 295 DEAVSKTTYVKLLGMDGARKEAKRLVDDA---LAALEPFGSRAEALKAIAHFIIEREN 349
>gi|206889920|ref|YP_002248053.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741858|gb|ACI20915.1| geranylgeranyl pyrophosphate synthetase, (ggppsynthetase) (ggps)
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 295
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 166/267 (62%), Gaps = 16/267 (5%)
Query: 37 LPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
P P ILH+++ YSL GGKRL LCIAS E G +++ + A AIE + T ++I DD
Sbjct: 27 FPTPPILHDSVLYSLTAGGKRLRPILCIASYEACDGMENI-VPYATAIEFIHTYSLIHDD 85
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIAIIKAKN-------I 143
LP +DNDDLRRGKP+NHKVFGE AILA +A L+ + A I + I
Sbjct: 86 LPAMDNDDLRRGKPTNHKVFGEGIAILAGDGLLTEAFTILSNKDYANISSNTLLKVISEI 145
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
+ A G G+ AGQ D+ SEGKE + FIH +KT I+AS+ G I+ +EE+I+
Sbjct: 146 SKAAGLRGMVAGQAYDLISEGKEPDERVVEFIHLYKTAAMIKASVKVGAILAEASEEKIK 205
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ +G+ +G+A+Q+ +DI+D+ G+ E M + G D+ + K TYP++ GI+ SK+ AKEL
Sbjct: 206 NLEIYGQSIGLAFQIVDDILDIEGTTEAMGKPKGSDIEKGKMTYPRVFGIEKSKQKAKEL 265
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIV 289
I +A + L F+ +A PL + ++I+
Sbjct: 266 IDKALESLTMFN-HKAEPLREIAHYII 291
>gi|138895964|ref|YP_001126417.1| farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196248855|ref|ZP_03147555.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
gi|134267477|gb|ABO67672.1| Farnesyl diphosphate synthase [Geobacillus thermodenitrificans
NG80-2]
gi|196211731|gb|EDY06490.1| Polyprenyl synthetase [Geobacillus sp. G11MC16]
Length = 297
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 167/276 (60%), Gaps = 15/276 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
++ ++ + + + AL + H P L +AM YSL GGKR+ L +++ + +G
Sbjct: 4 LEIEQFLNEQKQAVEAALSRYIAQLHGPETLKKAMAYSLEAGGKRIRPLLLLSTIQALGQ 63
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ S+ + +ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA L A
Sbjct: 64 NPSLGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYA 123
Query: 132 MQHIAIIKAKNI------------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
Q IA I + + A G EG+ AGQ+ D+ EGK ++L+EL +IHRHK
Sbjct: 124 FQLIAEIHDERVPVDVRLQLIAELAKAAGPEGMVAGQVADMEGEGKTLALAELEYIHRHK 183
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
TGK ++ S+ +G ++GG + ++ + F ++G+A+Q+ +DI+D+ G+ E + ++ G D
Sbjct: 184 TGKMLQYSVHAGALLGGADARQMRELNEFAAHLGLAFQIRDDILDIEGTEEKIGKRVGSD 243
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
KATYP L+ + G+K+ I AK+ L D
Sbjct: 244 RENHKATYPALLSLAGAKEKLAFHIDAAKRHLQQAD 279
>gi|296133204|ref|YP_003640451.1| polyprenyl synthetase [Thermincola potens JR]
gi|296031782|gb|ADG82550.1| Polyprenyl synthetase [Thermincola potens JR]
Length = 299
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 172/288 (59%), Gaps = 18/288 (6%)
Query: 23 KAKQINEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
K I EAL + +P +P +H++MRYS L GGKRL L +A+ E +GG +
Sbjct: 13 KVNIIEEALSQYLPGEDEYPETIHQSMRYSMLAGGKRLRPVLVLAAAEAVGGDVKKVIPA 72
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
ACAIE++ T ++I DDLP +D+D+ RRGKP+NH V+GEA AILA AL LA + ++
Sbjct: 73 ACAIEMIHTYSLIHDDLPAMDDDNYRRGKPTNHVVYGEAIAILAGDALLTLAFEVLSSLV 132
Query: 137 ---------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
+++ K I+ A GS G+ GQ++DI SE ++S L +IH HKTG +A
Sbjct: 133 EEPGIDPQKVLRVIKEISLAAGSRGLIGGQVVDIGSENLDISAETLKYIHIHKTGALFKA 192
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKAT 245
++ +G I+ +EE+I + + ++G+ +Q+ +DI+D+ G E + + G D+ + KAT
Sbjct: 193 ALKTGAILSSASEEQITALSRYAHFLGLGFQITDDILDIEGDTEKLGKPVGSDIKKKKAT 252
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
YP + G+ +K+ A+E +AE+ L FD RA L + +++ N
Sbjct: 253 YPSIFGLQEAKQMAREAVAESLMSLEGFD-ERADFLREMARYLLERDN 299
>gi|420156901|ref|ZP_14663741.1| polyprenyl synthetase [Clostridium sp. MSTE9]
gi|394756911|gb|EJF39970.1| polyprenyl synthetase [Clostridium sp. MSTE9]
Length = 295
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 160/273 (58%), Gaps = 21/273 (7%)
Query: 23 KAKQINEALDEAVPLPHPA------ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
+ +Q E L+EA+ P L +M YSL GGKR+ L + C + GGS +
Sbjct: 5 RQEQYVEMLEEALSRYLPGGDQLQQELFSSMEYSLLSGGKRIRPILTLEFCRLCGGSLTA 64
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
A+ ACAIE++ T ++I DDLPC+D+D+LRRG+P+NH+V+GEATA+LA AL LA + +
Sbjct: 65 ALPFACAIEMIHTYSLIHDDLPCMDDDELRRGRPTNHRVYGEATALLAGDALLTLAFETM 124
Query: 136 -------------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
A + A G+ G+ GQI+D+ SEGK++ LS L + KTG
Sbjct: 125 LSPQTIRTAGAVKTATAAGVLARAAGATGMVGGQIIDLASEGKKIPLSTLRVMDERKTGA 184
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMR 241
I A+ G ++GG E+I R + K +G+A+Q+ +DI+DV G + K G D +
Sbjct: 185 LILAAAEMGCVVGGAGNEKIRAAREYAKALGLAFQIVDDILDVTGDSTLLGKNVGVDDLN 244
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
DK+TY L+G+DG+KK +EL EA LA FD
Sbjct: 245 DKSTYVSLMGLDGAKKAVRELTDEAVTALAKFD 277
>gi|47076770|dbj|BAD18313.1| geranyltranstransferase [Geobacillus stearothermophilus]
Length = 319
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 157/257 (61%), Gaps = 14/257 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L PA L +AM YSL GGKR+ L +++ +G +V + +ACAIE++ T ++I DD
Sbjct: 28 LEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV-------- 147
LP +DNDDLRRGKP+NHKVFGEA AILA L A Q I I + I +V
Sbjct: 88 LPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLIVEIDDERIPPSVRLRLIERL 147
Query: 148 ----GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
G EG+ AGQ D+ EGK ++LSEL +IHRHKTGK ++ S+ +G +IGG + +
Sbjct: 148 AKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTR 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ F ++G+A+Q+ +DI+D+ G+ E + + G D +KATYP L+ + G+K+
Sbjct: 208 ELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFH 267
Query: 263 IAEAKQELAYFDPTRAA 279
I A++ L + D AA
Sbjct: 268 IEAAQRHLRHADVDGAA 284
>gi|319651489|ref|ZP_08005617.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
gi|317396804|gb|EFV77514.1| geranyltranstransferase [Bacillus sp. 2_A_57_CT2]
Length = 296
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 152/245 (62%), Gaps = 14/245 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P + E+M YSL GGKR+ L AS G S + A AIE++ T ++I DDLP
Sbjct: 30 PPEVKESMLYSLEAGGKRIRPMLLFASLAAFGEDTSKGLWTAAAIEMVHTYSLIHDDLPS 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKAKNINSA 146
+DNDDLRRGKP+NHKVFGEA AILA AL + Q IA + K ++ A
Sbjct: 90 MDNDDLRRGKPTNHKVFGEAFAILAGDALLTYSFQTIAETPDEFASAETKLSLIKELSKA 149
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQ DI EGK++ L +L +IH HKTGK +E S+VSG I+ ++E I+ +
Sbjct: 150 SGAEGMVGGQAADIKGEGKQLGLEDLEYIHVHKTGKLLECSVVSGAILANASQETIQALS 209
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G+ E+ K G D +DK+TYP L+ + G+K+ +E I
Sbjct: 210 KFAYHLGLAFQIRDDILDLEGTEEIIGKPVGSDESKDKSTYPSLLSMSGAKEALEEHIRS 269
Query: 266 AKQEL 270
AK++L
Sbjct: 270 AKEKL 274
>gi|94264970|ref|ZP_01288741.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
gi|93454573|gb|EAT04851.1| Polyprenyl synthetase [delta proteobacterium MLMS-1]
Length = 315
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 171/294 (58%), Gaps = 18/294 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH-PAILH-EAMRYSL-PGGKRLMSTLCIASCEMIG 70
+ +Y A + + + AL++ +P P H EAMRYSL GGKR+ LC+A+ E +G
Sbjct: 20 LDIKQYLAAQRELVEAALEQLLPAEDGPLAAHIEAMRYSLLAGGKRVRPILCLAAAEAVG 79
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ +A A+E + T ++I DDLP +DNDDLRRG P++HK FGEA AILA L
Sbjct: 80 SDPKPLLPVAGALECIHTYSLIHDDLPAMDNDDLRRGMPTSHKKFGEAAAILAGDGLLSF 139
Query: 131 AMQHIA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A + +A + + +AVG G+ GQ++DI +EG+ + L EL IHR
Sbjct: 140 AFELLARPLGEHGPGPAAQLRLLATVAAAVGPRGMVGGQVLDIEAEGRRLELDELQQIHR 199
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
HKTG I A++ +G I GG +E +++ + +G+ G+A+Q+ +D+++V + + + G
Sbjct: 200 HKTGALITAAVQAGAIGGGASETQLQALTRYGQQTGLAFQIVDDLLNVTSDTATLGKAAG 259
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
D R KATYP L+G++ ++ A+E +A A L FD RA PL L +I S
Sbjct: 260 SDAARGKATYPALLGLEATEDKAREAVAAAVAALESFD-HRAEPLRELARYIHS 312
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 174/292 (59%), Gaps = 17/292 (5%)
Query: 14 FQVNEYKALKAKQI-NEALDEAVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGG 71
F + Y A K K I NE ++ L +AM YSL GKR+ LCIA+ E +GG
Sbjct: 22 FDLESYFAEKTKTIKNELINIINKSNSFGQLSKAMEYSLISEGKRIRPILCIAAAESVGG 81
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
QS + ACAIE++ T ++I DDLP +DND LRRGKP+ H F EATAILA AL LA
Sbjct: 82 KQSDVLPAACAIEIIHTYSLIHDDLPAIDNDLLRRGKPTCHAAFNEATAILAGDALLTLA 141
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
Q ++ + N I++A G G+ GQ+ DI SE ++ L++L +H
Sbjct: 142 FQVLSEFELHNNTNALKWLKIINLISTAAGYMGMIEGQMRDIASENTQILLNKLEELHIL 201
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGR 237
KTG I AS+ SG I+ + ++I++++ + K +G+A+Q+ +D+++ +G P + K G
Sbjct: 202 KTGALIVASVESGAILANASLDQIKQLKIYAKKIGLAFQIADDLLNAMGDPTITGKPVGT 261
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D +R K+TYP L+GID S+ +AK+LI EA LA FD ++ PL + +I+
Sbjct: 262 DNVRKKSTYPSLLGIDESENYAKKLIKEALHALAIFD-NKSDPLRAIALYII 312
>gi|46310089|gb|AAS87323.1| geranylgeranyl pyrophosphate synthetase [Taxus wallichiana var.
chinensis]
Length = 207
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 139/207 (67%), Gaps = 14/207 (6%)
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA 140
CA+E++ TM++I DDLP +DNDD RRGKP+NHKVFGE TA+LA AL A +HIA+ +
Sbjct: 1 CAMEMIHTMSLIHDDLPRMDNDDFRRGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATS 60
Query: 141 KNINS------------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEAS 187
K + S +GS+G+ GQ++DI SEG V L L +IH HKT +E S
Sbjct: 61 KTVPSDRTLRVISELGKTIGSQGLVGGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECS 120
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATY 246
+VSG I+GG E+EI R+R + + VG+ +Q+ +DI+DV S E KT G+D++ DKATY
Sbjct: 121 VVSGGILGGATEDEIARIRRYARCVGLLFQVMDDILDVTKSSEELGKTAGKDLLTDKATY 180
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYF 273
PKL+G++ +K+ A EL +A + L+ F
Sbjct: 181 PKLMGLEKAKEFAAELATKAXEXLSSF 207
>gi|390959330|ref|YP_006423087.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
gi|390414248|gb|AFL89752.1| geranylgeranyl pyrophosphate synthase [Terriglobus roseus DSM
18391]
Length = 303
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 167/288 (57%), Gaps = 23/288 (7%)
Query: 28 NEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAI 83
+ AL+ +P P +H AMR+S+ GGKRL L I S MI G A + AI
Sbjct: 17 DAALERLLPGTATQPHNIHRAMRHSVFAGGKRLRPLLVIESARMIAGDLPDGAADVGAAI 76
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------- 136
E+L T ++I DDLP LDNDDLRRGKP+ H V+GEA AILA AL LA + +A
Sbjct: 77 EMLHTYSLIHDDLPALDNDDLRRGKPTCHVVYGEAMAILAGDALQTLAYETLAKLSGDAA 136
Query: 137 ----IIK--AKNINSAVGSEGIA----AGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I+K A + VGSEG+A GQ+MDI EG++ + + IHR KTG I
Sbjct: 137 AKIEIVKEVAIATGTGVGSEGLAPGMIGGQVMDIEGEGQKPTAELVEAIHRSKTGALITV 196
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMRDKAT 245
SIV+G +IGG + +E+ +R FG+ G+A+Q+ +DI+DV S E+ + G+D DKAT
Sbjct: 197 SIVAGGLIGGASADEVMHLRRFGQRAGLAFQIVDDILDVTQSSAELGKTAGKDTASDKAT 256
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+P + G+D S++ A EL+ + ELA F RA L + +V N
Sbjct: 257 WPAVFGLDASRETAAELLRDGLAELAGFG-ARADALKAVAKALVERTN 303
>gi|585326|sp|Q08291.1|ISPA_GEOSE RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|391610|dbj|BAA02551.1| farnesyl diphosphate synthase [Geobacillus stearothermophilus]
Length = 297
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 156/257 (60%), Gaps = 14/257 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L PA L +AM YSL GGKR+ L +++ +G +V + +ACAIE++ T ++I DD
Sbjct: 28 LEGPAKLKKAMAYSLEAGGKRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV-------- 147
LP +DNDDLRRGKP+NHKVFGEA AILA L A Q I I + I +V
Sbjct: 88 LPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERL 147
Query: 148 ----GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
G EG+ AGQ D+ EGK ++LSEL +IHRHKTGK ++ S+ +G +IGG + +
Sbjct: 148 AKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTR 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ F ++G+A+Q+ +DI+D+ G+ E + + G D +KATYP L+ + G+K+
Sbjct: 208 ELDEFAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFH 267
Query: 263 IAEAKQELAYFDPTRAA 279
I A++ L D AA
Sbjct: 268 IEAAQRHLRNADVDGAA 284
>gi|85859630|ref|YP_461832.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
gi|85722721|gb|ABC77664.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [Syntrophus aciditrophicus SB]
Length = 308
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 20/295 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
+N Y K +I+EA+D +P P L +AMRYSL GGKR+ LC+A+ E +G
Sbjct: 11 LDLNAYIKEKKLRIDEAIDRYLPGEEESPGELFKAMRYSLFAGGKRIRPILCLAAAEAVG 70
Query: 71 GSQS--VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
S S + +ACA+E + T ++I DDLP +DNDD RRGKP++HKVFG+A AILA AL
Sbjct: 71 TSVSSDCLLPVACALEYIHTYSLIHDDLPAMDNDDYRRGKPTSHKVFGDALAILAGDALL 130
Query: 129 CLAMQ-------------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
A + I + + I +A G+ G+ GQ+ D+ +EGK +L LN I
Sbjct: 131 TEAFELMTRTDFHTGLAPEILLRVIREIAAAAGAFGMVGGQVEDLRAEGKPGNLDTLNRI 190
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK- 234
H KTG I S+ +G I+ GG+E+ + + ++G +G+ +Q+ +DI++V G + K
Sbjct: 191 HNRKTGAMIVVSLRAGAILSGGSEQAVSALTDYGHKIGLVFQIADDILNVEGDRTVLGKS 250
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TG D R K T+P L+G++ S++ A L+ EA ++L FD RA PL + + V
Sbjct: 251 TGSDASRGKMTFPLLMGLEPSRQKAFALVEEALRDLDGFD-NRATPLRLMARYFV 304
>gi|375009473|ref|YP_004983106.1| geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288322|gb|AEV20006.1| Geranyltranstransferase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 297
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 14/245 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L +AM YSL GGKR+ L +A+ + +G ++ + +ACAIE++ T ++I DDLP
Sbjct: 31 PETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPS 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK------------AKNINSA 146
+DNDDLRRGKP+NHKVFGEA AILA AL A Q IA + + + A
Sbjct: 91 MDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G EG+ AGQ D+ +EGK ++L+EL +IHRHKTGK ++ S+ +G ++GG + + +
Sbjct: 151 AGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELN 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G E + ++ G D KATYP L+ + G+K+ I
Sbjct: 211 EFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPALLSLGGAKEKLAFHIDA 270
Query: 266 AKQEL 270
AK+ L
Sbjct: 271 AKRHL 275
>gi|357038612|ref|ZP_09100409.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
gi|355359404|gb|EHG07166.1| Farnesyltranstransferase [Desulfotomaculum gibsoniae DSM 7213]
Length = 296
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 164/287 (57%), Gaps = 18/287 (6%)
Query: 21 ALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
A +A ++EAL+E +P +P ++HEAMRYS+ GGKRL L +A +GG + +
Sbjct: 8 ARQANMVDEALNEYLPKAGSYPPLIHEAMRYSVFAGGKRLRPALVLAGARAVGGDEKSVL 67
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
ACAIELL T +++ DDLP +DNDD RRG P+NHKV+GEA A+LA AL LA +A
Sbjct: 68 QAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTLAFGLLAG 127
Query: 138 IKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+ + A G+ G+ GQ++D+ S GK + L +IH HKTG
Sbjct: 128 VSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHVHKTGALY 187
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDK 243
AS+ +G I+ G E++ + + + +G+A+Q+ +DI+D+ G + + + G D K
Sbjct: 188 RASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIGSDTKNQK 247
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
ATYP L G+ ++ A++ +A LA F A L LV F+++
Sbjct: 248 ATYPALHGLAAARSIARQAAEQANGALASFG-AEADFLRGLVCFVIN 293
>gi|56420928|ref|YP_148246.1| geranyltranstransferase [Geobacillus kaustophilus HTA426]
gi|47076820|dbj|BAD18360.1| geranyltranstransferase [Geobacillus kaustophilus]
gi|56380770|dbj|BAD76678.1| geranyltranstransferase (farnesyl-diphosphate synthase)
[Geobacillus kaustophilus HTA426]
Length = 297
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 14/245 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L +AM YSL GGKR+ L +A+ + +G ++ + +ACAIE++ T ++I DDLP
Sbjct: 31 PETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPS 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK------------AKNINSA 146
+DNDDLRRGKP+NHKVFGEA AILA AL A Q IA + + + A
Sbjct: 91 MDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLIAEVDDDRVPPSVRLQLIEQLAKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G EG+ AGQ D+ +EGK ++L+EL +IHRHKTGK ++ S+ +G ++GG + + +
Sbjct: 151 AGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELN 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G E + ++ G D KATYP L+ + G+K+ I
Sbjct: 211 EFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPALLSLGGAKEKLAFHIDA 270
Query: 266 AKQEL 270
AK+ L
Sbjct: 271 AKRHL 275
>gi|253576322|ref|ZP_04853652.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844215|gb|EES72233.1| polyprenyl synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 302
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 157/278 (56%), Gaps = 17/278 (6%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASC 66
L + + Y A+ ++ L ++P P L AM YSL GGKRL L +A+
Sbjct: 2 LQQQLSIEAYMKEIAEAVSTRLSSSLPAAWQVPETLSRAMDYSLMAGGKRLRPLLVVAAA 61
Query: 67 EMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQA 126
E +GGS+ AM +ACA+E++ T ++I DDLP LDNDD RRGKP+NHKVFGEA AILA
Sbjct: 62 EALGGSRDAAMPVACAVEMVHTYSLIHDDLPALDNDDFRRGKPTNHKVFGEAMAILAGDG 121
Query: 127 LHCLAMQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELN 173
L A + K ++ G G+ GQ+ D+ E L +L
Sbjct: 122 LLTHAFYSVVQASRKQGVPAEASLAIVEELSRFAGPGGMVGGQVADMQGEQGVTDLDQLR 181
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMR 232
+IH HKTG I S+ +G I GN E++E + +G+ +G A+Q+ +DI+D+IG ++
Sbjct: 182 YIHEHKTGDLIVFSVRAGGHIASGNAEQLEALERYGRALGHAFQIQDDILDLIGDESKLG 241
Query: 233 EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+KT D+++ K TYP +GI+ S+ + L +EAKQ L
Sbjct: 242 KKTQSDVIQQKVTYPYFIGIEASRAEVERLTSEAKQAL 279
>gi|261417748|ref|YP_003251430.1| polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297529440|ref|YP_003670715.1| polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|319767440|ref|YP_004132941.1| polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|448238671|ref|YP_007402729.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
gi|261374205|gb|ACX76948.1| Polyprenyl synthetase [Geobacillus sp. Y412MC61]
gi|297252692|gb|ADI26138.1| Polyprenyl synthetase [Geobacillus sp. C56-T3]
gi|317112306|gb|ADU94798.1| Polyprenyl synthetase [Geobacillus sp. Y412MC52]
gi|445207513|gb|AGE22978.1| (2E,6E)-farnesyl diphosphate synthase [Geobacillus sp. GHH01]
Length = 297
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 153/245 (62%), Gaps = 14/245 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L +AM YSL GGKR+ L +A+ + +G ++ + +ACAIE++ T ++I DDLP
Sbjct: 31 PETLKKAMAYSLEAGGKRIRPLLLLATIQALGKDPAIGLPVACAIEMIHTYSLIHDDLPS 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK------------AKNINSA 146
+DNDDLRRGKP+NHKVFGEA AILA AL A Q +A I + + A
Sbjct: 91 MDNDDLRRGKPTNHKVFGEAMAILAGDALLTYAFQLMAEIDDDRVPPPVRLQLIEQLAKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G EG+ AGQ D+ +EGK ++L+EL +IHRHKTGK ++ S+ +G ++GG + + +
Sbjct: 151 AGPEGMVAGQAADMEAEGKTLALAELEYIHRHKTGKMLQYSVHAGALLGGADGRQTRELN 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G E + ++ G D KATYP L+ + G+K+ I
Sbjct: 211 EFAAHLGLAFQIRDDILDIEGMEEKIGKRVGSDRDNKKATYPVLLSLGGAKEKLAFHIDA 270
Query: 266 AKQEL 270
AK+ L
Sbjct: 271 AKRHL 275
>gi|302142446|emb|CBI19649.3| unnamed protein product [Vitis vinifera]
Length = 301
Score = 193 bits (490), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 162/287 (56%), Gaps = 70/287 (24%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ 73
F +Y KA +++ALDEAV + P +HEAMRYSL + GG +
Sbjct: 68 FNFKDYMIQKASSVHKALDEAVYVKSPIKIHEAMRYSL----------------LAGGKR 111
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S AM ACA+E++ TM++I DDLPC+DNDDLRRGKP+NHKVFGE A+LA +L A +
Sbjct: 112 SNAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLAFAFE 171
Query: 134 HIAI----IKAKNINSAV-------GSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTG 181
H+A + + I +AV G+EG+ AGQ++DI+S G+ +V L +L FIH HKT
Sbjct: 172 HLATATSGVSSSRIVAAVGELAKSIGAEGLVAGQVVDISSTGQSDVGLDQLEFIHIHKTA 231
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMR 241
+EA++V G ++GGG++EE
Sbjct: 232 ALLEAAVVLGALLGGGSDEE---------------------------------------- 251
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
ATYPKL+G++ S++ A+ L EAK++L+ FD +AAPL L ++I
Sbjct: 252 --ATYPKLMGLEKSREFAENLNKEAKEQLSGFDLEKAAPLIALADYI 296
>gi|404493293|ref|YP_006717399.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
gi|77545350|gb|ABA88912.1| trans-isoprenyl diphosphate synthase [Pelobacter carbinolicus DSM
2380]
Length = 296
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 181/293 (61%), Gaps = 18/293 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
+N Y + Q+++ALD +P P LH+AMRYS GKR+ L +A+CE +G
Sbjct: 1 MDLNAYLKERRAQVDKALDTYLPGEDVLPISLHKAMRYSTFAAGKRIRPILMMAACEAVG 60
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
G+ M ACA+E++ T ++I DDLP +D+DD RRG+P+ HKV+G+A AILA AL
Sbjct: 61 GTVDKVMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGRPTCHKVYGDALAILAGDALLTE 120
Query: 131 AM---------QHIAIIKAKNINSAV----GSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A +++ A+ +++ + GS G+ GQ++D++SEGKE+ L+ L +IH
Sbjct: 121 AFILLSRLGEDGGVSLEAARRVSADIARCAGSMGMVGGQVVDMDSEGKEIDLATLEYIHT 180
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TG 236
KTG I AS+ SG ++GG + E+++ + + K G+A+Q+ +DI+D++G E+ K G
Sbjct: 181 RKTGALILASVQSGAVLGGASSEQVDNLGRYAKAAGLAFQVADDILDIVGDQELLGKDVG 240
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D R KATYP L+G+D ++ AKEL A + L+ FD RA PL + ++IV
Sbjct: 241 SDQERGKATYPALLGLDAARDRAKELRDVALESLSGFDE-RAEPLRSIAHYIV 292
>gi|169831187|ref|YP_001717169.1| polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
gi|169638031|gb|ACA59537.1| Polyprenyl synthetase [Candidatus Desulforudis audaxviator MP104C]
Length = 295
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 167/287 (58%), Gaps = 18/287 (6%)
Query: 21 ALKAKQINEALDEAV--PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
A KA+ I+ ALD + +P ++HEAMRYS+ GGKRL L +A+ + +G + + +
Sbjct: 7 AAKAETIDAALDRYLRQASENPPVIHEAMRYSVFAGGKRLRPALTLAAAQAVGAPERLVL 66
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA- 136
ACAIEL+ T ++I DDLP +DNDDLRRGKP+NH+VFGEA A+LA AL LA + +A
Sbjct: 67 PAACAIELIHTYSLIHDDLPAMDNDDLRRGKPTNHRVFGEAVALLAGSALFALAFEVLAG 126
Query: 137 ------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+ + + +A G+ G+ GQ +D+ S + VS +EL +HR KTG
Sbjct: 127 CRRDGGLAAERILAVVEEVAAACGTAGLIGGQALDVVSVSRTVSEAELEAVHRAKTGALF 186
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDK 243
A++ +G ++GG + ++ER+ F ++ G+A+Q+ +DI+DV G E K G D K
Sbjct: 187 RAAVRAGAVLGGASPVQLERLTVFAEHFGLAFQITDDILDVTGYAEQTGKAVGSDARNRK 246
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
TY + G++ +++ E A A L F P A L FIVS
Sbjct: 247 HTYVSVCGLEAARRRGAESSAAALAALEEFGP-EADFLRQAAEFIVS 292
>gi|261416040|ref|YP_003249723.1| polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|385790913|ref|YP_005822036.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372496|gb|ACX75241.1| Polyprenyl synthetase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326253|gb|ADL25454.1| geranylgeranyl diphosphate synthase [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 295
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 162/262 (61%), Gaps = 8/262 (3%)
Query: 17 NEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
EY A AK DE +P P LHEAMRYS+ GGKRL L A+ +M GG
Sbjct: 12 QEYLARIAKDAEAKFDEHLPPVKDRPCRLHEAMRYSMFAGGKRLRPGLAKATFDMFGGKG 71
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+E+L T ++I DDLPC+DNDD RRGK ++HK FGEATA++A AL A +
Sbjct: 72 EKIWLATSALEMLHTFSLIHDDLPCVDNDDYRRGKLTSHKKFGEATAVMAGDALCIHAFE 131
Query: 134 HIAII-KAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ AK I +G+ G+ G++ DI EGK V L +++IH HKT IEAS++
Sbjct: 132 MMGKTGNAKAIELLAHLLGTYGMIGGEMTDIECEGKTVDLEIVDYIHYHKTAALIEASLL 191
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPK 248
G ++ +E+++E +RN+G+ +G+A+Q+ +DI+D++ + E+ + G D+ + KATYP
Sbjct: 192 VGAMLAKASEKDMEIIRNYGRSIGLAFQIVDDILDIVSTTEELGKDAGSDIEKGKATYPS 251
Query: 249 LVGIDGSKKHAKELIAEAKQEL 270
+VG++ S++ A+EL E+ + L
Sbjct: 252 IVGLEKSRERARELYEESIKAL 273
>gi|148264230|ref|YP_001230936.1| polyprenyl synthetase [Geobacter uraniireducens Rf4]
gi|146397730|gb|ABQ26363.1| farnesyl-diphosphate synthase [Geobacter uraniireducens Rf4]
Length = 297
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 180/281 (64%), Gaps = 19/281 (6%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EALD +P P LH++MRYS+ GGKR+ L +A+C+ +GG S+AM ACA+
Sbjct: 14 VDEALDRFLPKADELPFSLHKSMRYSVFAGGKRIRPILMLAACDAVGGDISLAMPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA---MQHI----- 135
E++ T ++I DDLP +D+DD RRG P+NHKVFGEA AILA AL A M +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAIAILAGDALLTEAFILMSRVEPSAS 133
Query: 136 ----AIIKA-KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEASIV 189
A+++ + I+ GS G+ GQ++D+ SEGK E+ L+ + +IH HKTG I+AS+
Sbjct: 134 LPPEAVLRVIQEISHCAGSHGMVGGQVVDMESEGKAEMDLATVQYIHTHKTGALIKASVK 193
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPK 248
+G I+GG +E + + +G+ +G+A+Q+ +DI+D+ G+ E+ + G D R KATYP
Sbjct: 194 AGAILGGADEARLASLTTYGEAIGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATYPA 253
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++G+ SKK A EL+ A + LA FD RA PL + +IV
Sbjct: 254 VMGLAESKKRAVELVDMALESLAGFD-HRADPLRDIATYIV 293
>gi|308081287|ref|NP_001183931.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|148535923|gb|ABQ85648.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
gi|413947066|gb|AFW79715.1| putative geranylgeranyl pyrophosphate synthase 3 [Zea mays]
Length = 363
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 189/294 (64%), Gaps = 19/294 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
F Y + KA+ +++ALD + L P +L E+MRYS L GGKRL L IA+CE++GG
Sbjct: 65 FDFESYLSAKARAVHDALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGG 124
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ + A+ +ACA+E++ T ++I DD+PC+D+D LRRG+PSNH FGE TA+LA AL LA
Sbjct: 125 TAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALA 184
Query: 132 MQHIAIIKAK-------------NINSAVGSEGIAAGQIMDINSEGK---EVSLSELNFI 175
+H+A A + S G GIAAGQ+ D+ SEG VSL L +I
Sbjct: 185 FEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLGALEYI 244
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT 235
H HKT + +EA+ VSG ++GGG + E+ER+R + ++G+ Q+ +D++DV G+ E KT
Sbjct: 245 HVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKT 304
Query: 236 -GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G+D+ KATYP+L+G+ G++ + EL+A+A+ EL D R APL HL F+
Sbjct: 305 AGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAARTAPLRHLARFM 358
>gi|345877461|ref|ZP_08829207.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225510|gb|EGV51867.1| geranylgeranyl pyrophosphate synthetase [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 300
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 177/291 (60%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPL--PHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ E+ ++ ALD+++P PA LH+AMRY+ L GGKR+ L A+ + +G
Sbjct: 7 LREFMLFCQNRVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVE 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ + ACA+E++ +++ DDLP +D+D+LRRG+P+ HK + EATAIL AL A
Sbjct: 67 INQLDTAACAVEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAF 126
Query: 133 QHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q I + + ++ A GS G+ GQ +D+N+ G+E+SL+EL +H HKT
Sbjct: 127 QIICTSGNLHASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKT 186
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G I AS+ + ++ E E+ ++ ++ K VG+A+Q+ +DI+DV G E KT G+D
Sbjct: 187 GALIRASVNTASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKD 246
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DK TYP L+G++G+++ A EL A+A + L FD ++A PL L ++I+
Sbjct: 247 QAQDKPTYPALLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYII 296
>gi|325290005|ref|YP_004266186.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
gi|324965406|gb|ADY56185.1| farnesyl-diphosphate synthase [Syntrophobotulus glycolicus DSM
8271]
Length = 289
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 33 EAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
+ +P +L E+M Y+L GGKR+ L +A+ E++GG+ V + AC +E++ T ++
Sbjct: 18 QKLPWKANDVLSESMAYTLMAGGKRVRPVLALAAAEIVGGAPEVVIPCACGLEMIHTYSL 77
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAK 141
I DDLP LDNDD RRG+P+NHKVFGEATA+LA L Q +A I +
Sbjct: 78 IHDDLPALDNDDYRRGRPTNHKVFGEATALLAGDGLLTYGFQLLASDVPVPLERQIKVIR 137
Query: 142 NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEE 201
AVG +G+ GQ++D E E+S+S++ IH KTG + AS+ G I+GGG EEE
Sbjct: 138 ETAEAVGWQGMVRGQVLDTLGEKGELSVSQITNIHHLKTGALLTASVRLGAILGGGLEEE 197
Query: 202 IERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAK 260
I ++ + +G+A+Q+ +DI+D+ G+ + + + G D+ K+TYP ++G+DG+K K
Sbjct: 198 IRQLSIYAAALGLAFQIKDDILDIEGTEDALGKPVGSDLKLQKSTYPSILGMDGAKIQLK 257
Query: 261 ELIAEAKQELAYFD 274
+ I EAK L F+
Sbjct: 258 QKIIEAKTALEKFE 271
>gi|374639389|gb|AEZ55683.1| geranylgeranyl diphosphate synthase 3 [Salvia miltiorrhiza]
Length = 379
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/290 (45%), Positives = 191/290 (65%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
F Y K +N ALD A+PL HPA LHEAMRYSL GGKR+ +C+A+C ++GG
Sbjct: 85 FDFKAYMLEKIAAVNAALDAALPLRHPAKLHEAMRYSLLSGGKRVCPIVCLAACRLVGGE 144
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ AM ACA+E++ M++I DDLPC+D+DDLRRG+PSNHKVFGE A+LA AL A
Sbjct: 145 DAAAMPSACALEMIHAMSLIHDDLPCMDDDDLRRGRPSNHKVFGEPAAVLAGYALIASAF 204
Query: 133 QHIAI----IKAKN-------INSAVGSEGIAAGQIMDINS--EGKEVSLSELNFIHRHK 179
+HIA + A+ + +G+EG+ AGQ++D+ S G +V L +L +IH HK
Sbjct: 205 EHIATATEGVPAERTLRVIGEVARLIGAEGVVAGQVVDLRSGGGGDDVGLEKLEYIHVHK 264
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
T +EA+ V+G ++GG EEEI +R + + G+ +Q+ +D++DV S E KT G+D
Sbjct: 265 TAAAVEAAAVAGAVLGGACEEEIGNVRIYARRAGLMFQVVDDVLDVTKSTEELGKTAGKD 324
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ KATYPKL+G++ S++ A+ L EA+++L F+ RAAPL L++FI
Sbjct: 325 VATGKATYPKLIGVEKSREVAENLKREAQEQLLGFERGRAAPLMALLDFI 374
>gi|317051795|ref|YP_004112911.1| polyprenyl synthetase [Desulfurispirillum indicum S5]
gi|316946879|gb|ADU66355.1| Polyprenyl synthetase [Desulfurispirillum indicum S5]
Length = 296
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 21/285 (7%)
Query: 27 INEALDEAV-PLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
IN+ L+E + P P + +HEAM YS+ GGKRL LC+ + + +S + +ACA
Sbjct: 15 INQRLEELLSPSDEPLLTTIHEAMLYSVRAGGKRLRPLLCLLTAGALRQDESRVLDIACA 74
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ--------- 133
IE++ T ++I DDLP LDNDDLRRGKP+NH+V+GEA AILA AL A +
Sbjct: 75 IEMIHTYSLIHDDLPALDNDDLRRGKPTNHRVYGEAMAILAGDALLNRAFEVLCQLPLAP 134
Query: 134 HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ I I S+ G+ G+ GQ++DI SEGK + + + +IH +KTG+ I + +VS I
Sbjct: 135 DLVIRVIAEIASSSGTAGMIGGQVVDIQSEGKSIDMPTMRYIHENKTGRIIRSCLVSSAI 194
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGI 252
E+IE +G +G+A+Q+ +DI+D+ G M + G D+ K+T+P LVG+
Sbjct: 195 ACQATAEQIELFDRYGYNIGLAFQIADDILDIEGDEATMGKPVGSDLQNRKSTWPALVGM 254
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAP----LDHLVNFIVSFGN 293
+G++K +E+I EA + L DP +P L L FI+ N
Sbjct: 255 NGARKAMQEMIDEANRAL---DPLGDSPAVTALRDLARFIIERKN 296
>gi|357127831|ref|XP_003565581.1| PREDICTED: geranylgeranyl pyrophosphate synthase,
chloroplastic-like [Brachypodium distachyon]
Length = 383
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 188/316 (59%), Gaps = 30/316 (9%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLP----HPAILH---EAMRYS-LPGGKRLMS 59
D F +Y AK ++EALD A+ LP H H E+MRYS L GGKR+
Sbjct: 68 DEFSSGFDFEQYLTAHAKSVHEALDRALALPARLEHEPDHHWLIESMRYSVLSGGKRVRP 127
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
L IA+CE +GG + A +ACA+E++ M+++ D++PC+D+D LRRG+PS H FGE
Sbjct: 128 VLAIAACEFVGGDAAAAAPVACAVEMVHAMSLVHDEMPCMDDDALRRGRPSCHAAFGEHA 187
Query: 120 AILACQALHCLAMQHIAIIKAK---------------NINSAVGSEGIAAGQIMDINSEG 164
A+LA AL LA +H+A+ A I +A G G+AAGQ+ D EG
Sbjct: 188 ALLAGDALLALAFEHLALGYADAGIVVPAERALRSVAEIANAAGIGGVAAGQLADKACEG 247
Query: 165 KE-----VSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLW 219
+ VSL+ L +H HKT + +EA+ VSG I+GGG E+ER+R + + VG+ +Q+
Sbjct: 248 RGSRVGVVSLATLEHVHVHKTARLLEAAAVSGAIVGGGTGAEVERVRRYARRVGLLFQVV 307
Query: 220 NDIVDVI-GSPEMREKTGRDMMRDKATYPKLV-GIDGSKKHAKELIAEAKQELAYFDPTR 277
+D++DV S E+ + G+D++ DK+TYPKL+ G+D ++ +A EL+A A+ EL D R
Sbjct: 308 DDVLDVTRTSVELGKTAGKDLVADKSTYPKLLGGVDKARAYADELLAMAEAELEGVDARR 367
Query: 278 AAPLDHLVNFIVSFGN 293
AAPL L F+ N
Sbjct: 368 AAPLRQLARFVAYRQN 383
>gi|345863395|ref|ZP_08815606.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345125473|gb|EGW55342.1| dimethylallyltransferase / geranyltranstransferase / geranylgeranyl
pyrophosphate synthetase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 290
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/281 (38%), Positives = 174/281 (61%), Gaps = 18/281 (6%)
Query: 26 QINEALDEAVPL--PHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++ ALD+++P PA LH+AMRY+ L GGKR+ L A+ + +G + + ACA
Sbjct: 7 RVEHALDKSLPAESTSPARLHQAMRYAVLGGGKRIRPILTYATGQALGVEINQLDTAACA 66
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+E++ +++ DDLP +D+D+LRRG+P+ HK + EATAIL AL A Q I
Sbjct: 67 VEMIHAYSLVHDDLPAMDDDELRRGRPTCHKAYDEATAILVGDALQTQAFQIICTSGNLH 126
Query: 137 ------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ + ++ A GS G+ GQ +D+N+ G+E+SL+EL +H HKTG I AS+ +
Sbjct: 127 ASAETRLEMIETLSRASGSRGMCGGQALDLNAVGQELSLAELENLHIHKTGALIRASVNT 186
Query: 191 GVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
++ E E+ ++ ++ K VG+A+Q+ +DI+DV G E KT G+D +DK TYP
Sbjct: 187 ASLLAPRLEPEQAHQLDHYAKCVGLAFQIRDDILDVEGDTETLGKTQGKDQAQDKPTYPA 246
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
L+G++G+++ A EL A+A + L FD ++A PL L ++I+
Sbjct: 247 LLGLNGAREKAAELQADAHRSLTGFD-SKADPLRWLADYII 286
>gi|387929669|ref|ZP_10132346.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
gi|387586487|gb|EIJ78811.1| farnesyl diphosphate synthase [Bacillus methanolicus PB1]
Length = 297
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 151/242 (62%), Gaps = 14/242 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+I+ E+M YSL GGKR+ L A+ +G ++ A AIE++ T ++I DDLP
Sbjct: 31 PSIIKESMLYSLEAGGKRIRPLLLFATLHALGHDSKKGLNTAAAIEMIHTYSLIHDDLPS 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKAKNINSA 146
+DNDD RRGKP+NHKVFGEA A+LA AL + Q I+ + + ++ A
Sbjct: 91 MDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQMISETPEEYAAADTKLNLIRELSKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQ DI EGK++ LS+L +IH HKTGK + S+++G ++ G N+E+++ +
Sbjct: 151 AGAEGMVGGQAADIEGEGKQLDLSQLEYIHHHKTGKLLAYSVLAGAMLAGANDEQMKDLS 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G E+ K G D K+TYP L+ ++G+K+ + I +
Sbjct: 211 QFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDANNQKSTYPSLLSMEGAKEALTDHIGK 270
Query: 266 AK 267
AK
Sbjct: 271 AK 272
>gi|323702778|ref|ZP_08114438.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333924276|ref|YP_004497856.1| polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532295|gb|EGB22174.1| Polyprenyl synthetase [Desulfotomaculum nigrificans DSM 574]
gi|333749837|gb|AEF94944.1| Polyprenyl synthetase [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 294
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 169/282 (59%), Gaps = 16/282 (5%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A +++AL+E +P +P+ +HEAMRYS+ GGKRL L IA+ E +GGS M +A
Sbjct: 11 ALAVDKALNEYLPAAEVYPSTIHEAMRYSVFAGGKRLRPILTIAAAEAVGGSMEQVMPVA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA 140
CA+EL+ T +++ DDLP +DNDD RRG+P+NHKV+GEA AIL AL A + IA
Sbjct: 71 CALELIHTYSLVHDDLPAMDNDDFRRGRPTNHKVYGEAMAILVGDALLTQAFEVIAGTAV 130
Query: 141 K-----------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
K I A GS G+ GQ++D SE + + L +IHRHKTG ++
Sbjct: 131 KVSPDKVNQVTLEIARAAGSLGLIGGQVVDTLSEDQVIDGQVLEYIHRHKTGALFRVAVR 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+G I+ G + EE+ + + + +G+A+Q+ +D++D+ G ++ + G D+ KATYP
Sbjct: 191 AGAILSGASAEELAALTTYAEQMGLAFQIKDDLLDIEGDEAKIGKPVGSDVKNKKATYPA 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
L G++ +++ A AEA L F P +A L +++FI++
Sbjct: 251 LYGLEKAREMAARAAAEAVAALEIFGP-KAEFLRSIMHFIIN 291
>gi|307243218|ref|ZP_07525389.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
gi|306493346|gb|EFM65328.1| geranyltranstransferase [Peptostreptococcus stomatis DSM 17678]
Length = 294
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 165/272 (60%), Gaps = 18/272 (6%)
Query: 35 VPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
+PL + L AM YS GGKRL L + S ++ GG S + A AIE++ T ++
Sbjct: 22 LPLEEGYQKTLFSAMNYSYKAGGKRLRPILIMESYKLCGGKGSEYLPYAAAIEMIHTYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------------AIIK 139
I DDLP LDNDDLRRGK +NHKVFGEA AILA L A + I AI
Sbjct: 82 IHDDLPALDNDDLRRGKKTNHKVFGEAMAILAGDGLLNYAYEVILNHALNSSDQPSAIKA 141
Query: 140 AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
K I G G+ GQ++D+ SE KE+ L+ L+FIH +KT I A + SG + G ++
Sbjct: 142 CKAIADGAGIYGMVGGQVVDVESESKEIDLACLDFIHLNKTAAMIVACMKSGAYLAGADD 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKH 258
+ +E++ +G+Y+G+A+Q+ +DI+D+ G E+ + G D+ DKATYP ++G++ SK+
Sbjct: 202 DTVEKLEAYGRYLGLAFQIADDILDIEGDEKELGKNVGSDIENDKATYPHILGMERSKEI 261
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A++L+ +AK+++ F+ A L L ++++S
Sbjct: 262 ARDLVVKAKEKIEAFEG--AEFLVGLADYVIS 291
>gi|281417549|ref|ZP_06248569.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
gi|281408951|gb|EFB39209.1| Polyprenyl synthetase [Clostridium thermocellum JW20]
Length = 298
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 164/267 (61%), Gaps = 18/267 (6%)
Query: 24 AKQINEALDEAV---PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
A +NE LD + LP + L+ AMRYSL GGKRL L +A C+M+GGS +
Sbjct: 14 ADIVNEYLDRCIVQNELPEKS-LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPF 72
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--I 137
ACA+E++ T ++I DDLP +DNDD RRG+P+NHKV+GEA AILA L LA + + I
Sbjct: 73 ACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENI 132
Query: 138 IKAKNIN----------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
IK ++ A G G+ AGQ++D+ SEGK+V LN +HR KTG I+A
Sbjct: 133 IKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAP 192
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATY 246
+VS I+ G + ++I+++ F + +G+A+Q+ +DI+DV GS E + +K G D +K+TY
Sbjct: 193 VVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTY 252
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYF 273
+ G++ SK+ ++ +A L F
Sbjct: 253 VTVYGLEKSKEILSDVTKKAVDALEKF 279
>gi|317128429|ref|YP_004094711.1| polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315473377|gb|ADU29980.1| Polyprenyl synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 295
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 170/295 (57%), Gaps = 20/295 (6%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
N TL FF +E K KQI+ L + L P L +AM YSL GGKR+ L +A
Sbjct: 3 NGTLKHFF--DEEK----KQIDNRLPHIIENLNIPVQLRDAMIYSLKAGGKRIRPMLLLA 56
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
+ S +ACAIE++ T ++I DDLP +DNDDLRRGKP+NHKVFGEA AILA
Sbjct: 57 TLRGYNKPLSHGYDVACAIEMIHTYSLIHDDLPAMDNDDLRRGKPTNHKVFGEAMAILAG 116
Query: 125 QALHCLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
L + Q I+ ++ + ++ A G EG+ GQ++D+ EG +S+ +L
Sbjct: 117 DGLLTYSFQLISSSMLLPDNVKLLLIQKMSQAAGPEGMVGGQVLDMQGEGITLSVDQLQK 176
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMRE 233
IH HKTG + S+ SG I+ G +E E + +F K++G+A+Q+ +DI+DV G + +
Sbjct: 177 IHHHKTGDLLAVSVESGAILAGVSENERISLTSFAKHLGIAFQIKDDILDVEGDESSIGK 236
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G D DK TYPKL+G+DG+K+ I+EAK+ L Y L+ + ++I
Sbjct: 237 PIGSDEENDKNTYPKLLGLDGAKQKLAFHISEAKKYL-YETSIEHTLLEEMADYI 290
>gi|256005455|ref|ZP_05430418.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|385778739|ref|YP_005687904.1| polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|419722103|ref|ZP_14249252.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
gi|419724850|ref|ZP_14251907.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|255990595|gb|EEU00714.1| Polyprenyl synthetase [Clostridium thermocellum DSM 2360]
gi|316940419|gb|ADU74453.1| Polyprenyl synthetase [Clostridium thermocellum DSM 1313]
gi|380771739|gb|EIC05602.1| Polyprenyl synthetase [Clostridium thermocellum YS]
gi|380781857|gb|EIC11506.1| Polyprenyl synthetase [Clostridium thermocellum AD2]
Length = 298
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 164/267 (61%), Gaps = 18/267 (6%)
Query: 24 AKQINEALDEAV---PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
A +NE LD + LP + L+ AMRYSL GGKRL L +A C+M+GGS +
Sbjct: 14 ADIVNEYLDRCIVKNELPEKS-LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPF 72
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--I 137
ACA+E++ T ++I DDLP +DNDD RRG+P+NHKV+GEA AILA L LA + + I
Sbjct: 73 ACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENI 132
Query: 138 IKAKNIN----------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
IK ++ A G G+ AGQ++D+ SEGK+V LN +HR KTG I+A
Sbjct: 133 IKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAP 192
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATY 246
+VS I+ G + ++I+++ F + +G+A+Q+ +DI+DV GS E + +K G D +K+TY
Sbjct: 193 VVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTY 252
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYF 273
+ G++ SK+ ++ +A L F
Sbjct: 253 VTVYGLEKSKEILSDVTKKAVDALEKF 279
>gi|125973349|ref|YP_001037259.1| farnesyl-diphosphate synthase [Clostridium thermocellum ATCC 27405]
gi|125713574|gb|ABN52066.1| Polyprenyl synthetase [Clostridium thermocellum ATCC 27405]
Length = 295
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 164/267 (61%), Gaps = 18/267 (6%)
Query: 24 AKQINEALDEAV---PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
A +NE LD + LP + L+ AMRYSL GGKRL L +A C+M+GGS +
Sbjct: 11 ADIVNEYLDRCIVQNELPEKS-LYSAMRYSLMAGGKRLRPVLSLAVCDMLGGSVEQVLPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--I 137
ACA+E++ T ++I DDLP +DNDD RRG+P+NHKV+GEA AILA L LA + + I
Sbjct: 70 ACAVEMIHTYSLIHDDLPAMDNDDFRRGRPTNHKVYGEALAILAGDGLLNLAFEIMLENI 129
Query: 138 IKAKNIN----------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
IK ++ A G G+ AGQ++D+ SEGK+V LN +HR KTG I+A
Sbjct: 130 IKNGDMERKSKAAAVIAKAAGMNGMIAGQVIDLESEGKQVDNEILNRMHRLKTGALIKAP 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATY 246
+VS I+ G + ++I+++ F + +G+A+Q+ +DI+DV GS E + +K G D +K+TY
Sbjct: 190 VVSAAILCGADADDIQKLDEFAENLGLAFQIKDDILDVEGSSEKLGKKVGSDADNNKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYF 273
+ G++ SK+ ++ +A L F
Sbjct: 250 VTVYGLEKSKEILSDVTKKAVDALEKF 276
>gi|410453715|ref|ZP_11307660.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
gi|409932929|gb|EKN69883.1| polyprenyl synthetase [Bacillus bataviensis LMG 21833]
Length = 297
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 158/254 (62%), Gaps = 17/254 (6%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
EYK L ++ +++ L P+++ E+M YSL GGKR+ L A+ + G
Sbjct: 11 QEYKHLLDSELRALVEK---LDAPSVIKESMIYSLEAGGKRIRPLLLFATLDAFGIDPKK 67
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
+ +A AIE++ T ++I DDLP +DNDDLRRGKP+NHKVFG+A AILA AL + + I
Sbjct: 68 GLPVAAAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGDAIAILAGDALLTYSFEVI 127
Query: 136 AIIKAK------------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
++ + + A G+EG+ GQ+ D+ EGK ++L EL++IH HKTGK
Sbjct: 128 GLLSNEFAPANTKLKLVVEMAKAAGTEGMVGGQVADMEGEGKNLTLPELDYIHIHKTGKL 187
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRD 242
+ S+V+G I+ ++ +++ + F ++G+A+Q+ +DI+D+IG+P++ K G D
Sbjct: 188 LRFSVVAGAILADSSQSQLDHLSGFAHHLGLAFQIQDDILDLIGNPQVIGKPVGSDTTNH 247
Query: 243 KATYPKLVGIDGSK 256
K+TYP+L+ ++G++
Sbjct: 248 KSTYPQLLSLEGAR 261
>gi|423090783|ref|ZP_17079069.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
gi|357555898|gb|EHJ37520.1| putative geranyltranstransferase [Clostridium difficile
70-100-2010]
Length = 295
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 163/264 (61%), Gaps = 16/264 (6%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSM 79
KA + + L E +P + + EAM YSL GGKRL L + +C+++GG++ A+
Sbjct: 10 KASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---- 135
A AIE++ T ++I DDLP LDNDDLRRG+P+NHKV+GEA ILA AL A + +
Sbjct: 70 AIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGS 129
Query: 136 -------AIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+KA N I G G+ GQ++D+ SE K++ +L++IH +KT +
Sbjct: 130 INKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGC 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
+++G IGG N E++E + + K +G+++Q+ +DI+D++G ++ +K G D+ K+TY
Sbjct: 190 MIAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQEL 270
P L+G+D SK+ A LI EAK+ +
Sbjct: 250 PSLLGLDKSKEIAHNLIDEAKKSI 273
>gi|253682719|ref|ZP_04863516.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
gi|253562431|gb|EES91883.1| geranyltranstransferase [Clostridium botulinum D str. 1873]
Length = 287
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 160/246 (65%), Gaps = 12/246 (4%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ IL+++M+YS+ GGKR+ L +++ + + M MACAIE++ T ++I DDLP
Sbjct: 22 YNKILYDSMKYSIEVGGKRIRPILMLSTYSIYKNNYKDIMPMACAIEMIHTYSLIHDDLP 81
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAV 147
+DNDDLRRGKP+NHKVFGEA AILA L + L +A++ +K I+ A
Sbjct: 82 GMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNIMFNYSLTHDKLALMASKVISEAS 141
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+EG+ GQ++DI SEG+E+S +L ++H++KTG+ I++SI++G I+GG ++EEIE +
Sbjct: 142 GAEGMIGGQVVDIISEGQEISPDKLKYMHKNKTGQLIKSSIIAGAILGGASKEEIEILDE 201
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
FG +G+A+Q+ +DI+DVIG ++ K +D +K T+ G+ K+ EL +
Sbjct: 202 FGSKLGLAFQIKDDILDVIGDSKILGKEVHKDDENNKTTFISHFGLKKCKELCVELTEQC 261
Query: 267 KQELAY 272
+ L+Y
Sbjct: 262 IKLLSY 267
>gi|307105633|gb|EFN53881.1| hypothetical protein CHLNCDRAFT_31906 [Chlorella variabilis]
Length = 304
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 64/289 (22%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ 73
F +Y +A I+ ALD++VPL +P I++E+MRYSL G
Sbjct: 61 FDFQQYMKERATLIDAALDKSVPLQYPEIINESMRYSLLAG------------------- 101
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
RRGKP+NHKV+GE AILA AL L+ +
Sbjct: 102 -------------------------------RRGKPTNHKVYGEEIAILAGDALLSLSFE 130
Query: 134 HIA----------IIKA-KNINSAVGSEGIAAGQIMDINSEG--KEVSLSELNFIHRHKT 180
+IA +++ + AVGSEG+ AGQ +DI SEG + V L L +IH HKT
Sbjct: 131 YIARETRGVAADRVLQVIVEVGKAVGSEGLVAGQAVDIKSEGAGESVGLDTLQYIHEHKT 190
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
+EA++VSG I+GG E +++R+R + + +G+A+Q+ +DI+D+ + E KT G+D+
Sbjct: 191 AVLLEAAVVSGAILGGATEVDVDRLRKYSRSIGLAFQVVDDILDITATTEELGKTAGKDL 250
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
K TYP LVG++ S++ A ELI EAK L +DP RAAPL L +I
Sbjct: 251 ASAKTTYPSLVGLERSREIADELIEEAKSMLTTYDPARAAPLYALAEYI 299
>gi|167628424|ref|YP_001678923.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
gi|167591164|gb|ABZ82912.1| geranylgeranyl pyrophosphate synthase [Heliobacterium modesticaldum
Ice1]
Length = 296
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 178/291 (61%), Gaps = 32/291 (10%)
Query: 25 KQINEALDEAVPLPHPA------ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
KQ+N +D A+ PA ++H+AMRYSL GGKRL L +A C +GG + M
Sbjct: 8 KQLNMKIDAALSRYMPAEDVAPPVIHKAMRYSLFAGGKRLRPVLVLAGCRAVGGDEESVM 67
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC------------- 124
+ ACA+E++ T ++I DDLP +D+DDLRRG P+NH VFGEATAILA
Sbjct: 68 AAACALEMIHTYSLIHDDLPAMDDDDLRRGMPTNHVVFGEATAILAGDGLLTRAFGVLAE 127
Query: 125 QALHC-----LAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ L C L +Q IA + A GS G+ GQ+MD+ SE K++ ++ + +IH HK
Sbjct: 128 EGLRCGRSPALVLQVIA-----ELADAAGSMGMIGGQVMDMESENKQIDVATMAYIHAHK 182
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
TG I AS+ G ++GGG+ E++E + +G ++G+A+Q+ +D++D+ G PE + + G D
Sbjct: 183 TGALIRASLRIGALLGGGSVEQVEALSRYGDHLGLAFQITDDLLDIQGDPEKIGKPVGSD 242
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ +KATYP L+G++ +++ A+ ++ A LA FD +A L L +++
Sbjct: 243 VKNNKATYPALLGLEKARQEAERVVQAALDSLAGFD-EKAELLRELAQYLL 292
>gi|302036073|ref|YP_003796395.1| geranyltranstransferase [Candidatus Nitrospira defluvii]
gi|300604137|emb|CBK40469.1| Geranyltranstransferase [Candidatus Nitrospira defluvii]
Length = 326
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 159/269 (59%), Gaps = 22/269 (8%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
LHE+MRYSL GGKR+ L IA+ E IG + M++AC++E + T ++I DDLP +DN
Sbjct: 62 LHESMRYSLMAGGKRVRPILTIAAAEAIGATPPGLMAVACSLEFIHTYSLIHDDLPSMDN 121
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---IIKA----------KNINSAVG 148
DD RRGKP+NHKV+GEA AILA AL +A I+ ++K + + G
Sbjct: 122 DDFRRGKPTNHKVYGEAMAILAGDALLTMAFDLISRPELMKGCEPTRQVRILQELAYGSG 181
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+ G+ GQ+ DI +E +++ L L IH+HKTG I A++ G + G + +++ M +
Sbjct: 182 NMGMVGGQVFDIQAENQDIDLPTLQNIHKHKTGMLIRAAVRMGAMAAGATDRQLDDMTGY 241
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKTGR----DMMRDKATYPKLVGIDGSKKHAKELIA 264
+ +G+A+Q+ +D+++V G+ RE+ G+ D R K TYP G++G++K A + +
Sbjct: 242 AEDIGLAFQIADDVLNVTGT---REELGKNPNTDAERGKKTYPTFYGVEGARKLADDCVT 298
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A L F P+ A PL + +I + N
Sbjct: 299 RAIGRLNTFGPS-ADPLREIARYITARKN 326
>gi|222055717|ref|YP_002538079.1| polyprenyl synthetase [Geobacter daltonii FRC-32]
gi|221565006|gb|ACM20978.1| Polyprenyl synthetase [Geobacter daltonii FRC-32]
Length = 297
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 183/294 (62%), Gaps = 19/294 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
+ Y + + +++AL+ +PL PA LH++MRYS+ GGKR+ L +A+CE +G
Sbjct: 1 MDLKSYLKERCQLVDDALNRFLPLADDLPASLHKSMRYSIFAGGKRIRPILMLAACEAVG 60
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
G+ S AM ACA+E++ T ++I DDLP +D+DD RRG P+NHKVFGEA AILA AL
Sbjct: 61 GNISQAMPAACAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTE 120
Query: 131 AMQHIAIIKA-------------KNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIH 176
A ++ + A + I+ GS G+ GQ++D+ SEG E+ L+ + +IH
Sbjct: 121 AFILLSNLAAAPTVPPAALVQVIQEISCCAGSRGMVGGQVVDMESEGNAEIDLATVQYIH 180
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKT 235
HKTG I+AS+ SG ++GG + ++ E + +G+ +G+A+Q+ +DI+D+ G+ E+ +
Sbjct: 181 THKTGALIKASVKSGALLGGASSKDAESLTRYGEAIGLAFQIADDILDIEGTTEEIGKDA 240
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
G D R KATYP ++G+ +K A EL+ A L+ FD +A PL + ++IV
Sbjct: 241 GSDEARGKATYPAVMGLAEAKIRAAELVDIALDALSAFD-GKADPLREIASYIV 293
>gi|94970459|ref|YP_592507.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
gi|94552509|gb|ABF42433.1| farnesyl-diphosphate synthase [Candidatus Koribacter versatilis
Ellin345]
Length = 315
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 164/277 (59%), Gaps = 16/277 (5%)
Query: 28 NEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS-MACAI 83
+ AL+ +P P +H+AMR+S+ GGKRL L + + MI GS + + A+
Sbjct: 36 DAALERLLPPGTQRPPSIHQAMRHSVFAGGKRLRPILVMEAARMITGSLPDGVDELGAAL 95
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA--- 140
E+L T ++I DDLP LDNDDLRRG+P+ H FGEATAILA AL A + +A ++
Sbjct: 96 EMLHTYSLIHDDLPALDNDDLRRGRPTCHVAFGEATAILAGDALQTYAYEVMARLRTTAE 155
Query: 141 ------KNINSAVGS-EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + A G+ +G+ GQ++D+ +E + + +IHR KTG I AS+V+G +
Sbjct: 156 ARVQIIEEVAHATGTIDGMIGGQVLDLEAEHTHADAATVEYIHRSKTGALITASVVAGGL 215
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G ++ +++R+R FGK G+A+Q+ +D++DV + E KT G+D +K+T+P L G+
Sbjct: 216 YAGADKAQVQRIREFGKSAGLAFQIVDDVLDVTQTSEQLGKTAGKDTKSEKSTWPSLYGV 275
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D S + A EL+ A + L F RA L L F+V
Sbjct: 276 DKSLEMADELVYTANKRLDSFGE-RATTLKELAKFLV 311
>gi|39996864|ref|NP_952815.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|409912286|ref|YP_006890751.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
gi|39983752|gb|AAR35142.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens PCA]
gi|298505877|gb|ADI84600.1| trans-isoprenyl diphosphate synthase [Geobacter sulfurreducens
KN400]
Length = 297
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 181/285 (63%), Gaps = 25/285 (8%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EAL+ +P P+ +H AMRYS+ GGKR+ L +A+C+ +GG ++A+ ACA+
Sbjct: 14 VDEALERHLPAEDELPSSVHRAMRYSVFAGGKRVRPILMLAACDAVGGDTALALPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNI 143
E++ T ++I DDLP +D+DD RRG+P+NHKVFGEA AILA A L + +I + +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDA---LLTEAFILISSPSY 130
Query: 144 NSAVGSE----------------GIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEA 186
+AVGS+ G+ GQ++D+ SEG KE+ L+ + +IH KTG I+A
Sbjct: 131 AAAVGSDRLLPVIHEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKA 190
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKAT 245
SI +G ++GG N + ++ + +G+ +G+A+Q+ +DI+D+ G+ E K G D R KAT
Sbjct: 191 SIKAGAVLGGANADAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKAT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
YP ++G+ SK+ A+EL+ A + L+ FD RA PL + +IVS
Sbjct: 251 YPAVLGLAESKRRAQELLDLAIEALSPFD-HRADPLREIARYIVS 294
>gi|331269445|ref|YP_004395937.1| polyprenyl synthetase [Clostridium botulinum BKT015925]
gi|329125995|gb|AEB75940.1| Polyprenyl synthetase [Clostridium botulinum BKT015925]
Length = 289
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 162/247 (65%), Gaps = 12/247 (4%)
Query: 38 PHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
+ +L+++M+YS+ GGKR+ L +++ + + M MACAIE++ T ++I DDL
Sbjct: 23 SYNKVLYDSMKYSIEVGGKRIRPILMLSTYSIYKDNYKDIMPMACAIEMIHTYSLIHDDL 82
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSA 146
P +DNDDLRRGKP+NHKVFGEA AILA L + L +A++ +K I+ A
Sbjct: 83 PGMDNDDLRRGKPTNHKVFGEAIAILAGDGLLNEAMNVMFNYSLTHDKVALMASKVISEA 142
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQ++DI SEG+++S+ +L ++H++KTG+ I++SI++G I+GG ++E +E +
Sbjct: 143 AGAEGMIGGQVVDIISEGQKISIDKLKYMHKNKTGQLIKSSIIAGAILGGASKENLEILD 202
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
FG +G+A+Q+ +DI+DVIG S + ++ +D +K T+ G++ K+ EL +
Sbjct: 203 EFGSKLGLAFQIKDDILDVIGDSKVLGKEVHKDDENNKTTFISCFGLEKCKELCVELTEQ 262
Query: 266 AKQELAY 272
+ L+Y
Sbjct: 263 CIKLLSY 269
>gi|333979347|ref|YP_004517292.1| polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822828|gb|AEG15491.1| Polyprenyl synthetase [Desulfotomaculum kuznetsovii DSM 6115]
Length = 296
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 172/296 (58%), Gaps = 27/296 (9%)
Query: 16 VNEYKALKAKQINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ E KA +A ++ ALDE +P +P ++H+A+RYSL GGKRL L +A+ E +GG
Sbjct: 4 LTELKA-RAALVDRALDEFLPPEDTYPPVIHQAIRYSLFAGGKRLRPVLALAAAETVGGD 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ + ACA+EL+ T ++I DDLP +DNDD RRGKP+ H+V+GEA AILA AL +
Sbjct: 63 PARVLPAACALELIHTYSLIHDDLPAMDNDDFRRGKPTCHRVYGEAVAILAGDAL----L 118
Query: 133 QHIAIIKAKN-----------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
H + AKN + +A G+ G+ GQ++D + V + L +I
Sbjct: 119 THAFALLAKNAQNQLAPAERVVQVIEEVAAAAGTLGLIGGQVVDTLAADTAVDAATLEYI 178
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREK 234
HRHKTG ++ +G I+ G E+++E + + + +G+A+Q+ +DI+DV G P + +
Sbjct: 179 HRHKTGALYRVAVRAGAILAGAKEKQLEALTIYAENLGLAFQIQDDILDVEGDPARLGKP 238
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
G D KATYP L G+D ++ A E +A A L FD RA L LV F+++
Sbjct: 239 VGSDERNKKATYPALFGLDVARAKAGEAVAAALAALEPFD-ERADFLRELVRFVIT 293
>gi|347755955|ref|YP_004863519.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
gi|347588473|gb|AEP13003.1| farnesyl-diphosphate synthase [Candidatus Chloracidobacterium
thermophilum B]
Length = 292
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 167/290 (57%), Gaps = 17/290 (5%)
Query: 16 VNEYKALKAKQINEALDEAVP---LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
+ Y A K ++N LD+ +P P P I HEAMRYSL GGKRL L +A+ E+ GG
Sbjct: 2 IEAYFAEKVPEVNRWLDQLMPPVTTPPPRI-HEAMRYSLMAGGKRLRPILVLAAGEVFGG 60
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ +ACA E++ T ++I DDLP +DNDDLRRG P+ HK F EATAILA L A
Sbjct: 61 APERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHA 120
Query: 132 MQHIAIIKAKNINS-------AVGS---EGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A + A AVGS EG+ AGQI+D+ +EGK + L FIHR KTG
Sbjct: 121 FRILAEMDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAEGKPIDAGRLAFIHRAKTG 180
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
I ++V G I+ E ++ + +G VG+A+Q+ +DI+D + E KT G+D
Sbjct: 181 ALIRGALVCGGIVADAAESDLALLSAYGDRVGLAFQIADDILDETATAEQLGKTPGKDAA 240
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
KATYP L G++ S+K A+ L EA + LA RA L + F+V+
Sbjct: 241 AGKATYPALYGLEASRKQAEALAEEAIEVLAPLG-QRAQLLIEMARFVVN 289
>gi|333370560|ref|ZP_08462555.1| geranyltranstransferase [Desmospora sp. 8437]
gi|332977569|gb|EGK14339.1| geranyltranstransferase [Desmospora sp. 8437]
Length = 298
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 172/292 (58%), Gaps = 17/292 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
++ Y KAK + L E + P P L EAM YSL GGKRL L +A+ E +GG
Sbjct: 3 EIQRYLKEKAKSVEARLKEYMERPAGIPETLREAMAYSLLAGGKRLRPVLTLATAEALGG 62
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A+ ACA+E++ T ++I DDLP +D+DD RRG P+NHK++GEA AILA AL A
Sbjct: 63 DEEKALPFACAVEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKIYGEAMAILAGDALLTRA 122
Query: 132 M-------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+ A+ + G+EG+ GQ+ DI EG+EVSL EL IHR
Sbjct: 123 FDVMAEGALDAELPRKTALTLIRECAVRAGAEGMVGGQVKDIQGEGREVSLEELQDIHRS 182
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGR 237
KTG I S+ G ++GG E+E++ + + + +G+A+Q+ +D++DV+G ++ + G
Sbjct: 183 KTGDLITGSVRIGAMVGGSGEDELQALTGYAERLGLAFQIQDDVLDVVGDHQKLGKPVGS 242
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D +++K+TYP L+G+D S++ + L+ EAKQ + + R A L + +++
Sbjct: 243 DEVKNKSTYPSLLGLDSSRERIRSLVEEAKQLITAQERIRPARLLAIADYLT 294
>gi|358451415|ref|ZP_09161849.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
gi|357224648|gb|EHJ03179.1| polyprenyl synthetase [Marinobacter manganoxydans MnI7-9]
Length = 298
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 159/266 (59%), Gaps = 24/266 (9%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAMRYS L GGKR+ LC+A+ + +G + A+ AC++EL+ ++I DDLP +D+
Sbjct: 36 LQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMDD 95
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D+LRRG+P+ H F EATAILA AL LA +A +I + + A G G
Sbjct: 96 DELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLPESVRLIMVRELARASGHGG 155
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGK 210
+ GQ +D+ S GK ++L++L +HRHKTG IE S+ G + +E+ + + + K
Sbjct: 156 MVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQYAK 215
Query: 211 YVGMAYQLWNDIVD------VIGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+G+A+Q+ +D++D VIG P+ G D R K TYP L+G++G+++H L+
Sbjct: 216 ALGLAFQVQDDLLDIEGDTTVIGKPQ-----GSDAARAKPTYPALLGLEGAREHLANLLE 270
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIVS 290
+A+Q L F P A PL + +++V+
Sbjct: 271 QAQQSLQAFGP-EADPLRAMADYVVA 295
>gi|406980661|gb|EKE02234.1| Polyprenyl synthetase [uncultured bacterium]
Length = 302
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 168/283 (59%), Gaps = 20/283 (7%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMST 60
I Q++ L + Q N+ K IN L++ + + +P I+ E+MRY+ L GKR+
Sbjct: 3 IVQQQDSNLVEALQENK------KLINTYLEKYLEIRYPQIIWESMRYTTLSDGKRIRPV 56
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
L + S GG+ + ACAIE++ ++I DDLPC+DNDD RRG+ +NHKV+GEA A
Sbjct: 57 LALESARACGGNIENVIPTACAIEMIHAQSLIHDDLPCMDNDDYRRGRLTNHKVYGEAFA 116
Query: 121 ILACQALHCLA----MQHIAIIKAKN--------INSAVGSEGIAAGQIMDINSEGKEVS 168
+LA AL A +QH ++ + A G+ G+ GQ++DI+SE KE+
Sbjct: 117 VLAGDALLSYAPQIIIQHTPAYVDRDLLFQVLEELAIAAGALGLIGGQVIDIDSENKEID 176
Query: 169 LSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS 228
+ N+IH HKTG+ + ++ SG ++ +E++E + +G+ VG A+Q+ +DI+D+ G+
Sbjct: 177 IPTFNYIHTHKTGELFKFAMRSGALLSQATDEQLEILTEYGRLVGYAFQIADDILDITGT 236
Query: 229 PEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
E KT G+D + K T+P L G+ SK+ ++L ++A+Q L
Sbjct: 237 KESLGKTPGKDKLAKKNTHPSLFGLSQSKEEVEQLCSKAQQIL 279
>gi|385330322|ref|YP_005884273.1| geranyltranstransferase [Marinobacter adhaerens HP15]
gi|311693472|gb|ADP96345.1| geranyltranstransferase [Marinobacter adhaerens HP15]
Length = 298
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 159/266 (59%), Gaps = 24/266 (9%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAMRYS L GGKR+ LC+A+ + +G + A+ AC++EL+ ++I DDLP +D+
Sbjct: 36 LQEAMRYSVLGGGKRIRPALCLAAAKAMGQTGDEALIPACSVELIHAYSLIHDDLPAMDD 95
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D+LRRG+P+ H F EATAILA AL LA +A +I + + A G G
Sbjct: 96 DELRRGRPTTHIAFDEATAILAGDALQALAFGWLAEAPGLSESVRLIMVRELARASGHGG 155
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGK 210
+ GQ +D+ S GK ++L++L +HRHKTG IE S+ G + +E+ + + + K
Sbjct: 156 MVGGQAIDLESVGKTLALAQLETMHRHKTGALIETSVRIGALTAPSVDEQALASLTQYAK 215
Query: 211 YVGMAYQLWNDIVD------VIGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+G+A+Q+ +D++D VIG P+ G D R K TYP L+G++G+++H L+
Sbjct: 216 ALGLAFQVQDDLLDIEGDTTVIGKPQ-----GSDAARAKPTYPALLGLEGAREHLANLLE 270
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIVS 290
+A+Q L F P A PL + +++V+
Sbjct: 271 QAQQSLQAFGP-EADPLRAMADYVVA 295
>gi|374579594|ref|ZP_09652688.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
gi|374415676|gb|EHQ88111.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus youngiae
DSM 17734]
Length = 288
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 157/259 (60%), Gaps = 13/259 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
IL+E+M YSL GGKR+ L +AS E +GG+ + A A+EL+ T ++I DDLP +D
Sbjct: 26 ILNESMYYSLIGGGKRIRPVLALASAEAVGGNPETILRAAVALELIHTYSLIHDDLPAMD 85
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSE 150
NDD RRG+ SNHKVFGEA AILA AL A + +A + + + A G E
Sbjct: 86 NDDYRRGRLSNHKVFGEAQAILAGDALLTYAFELLADSDLGQPERQLRVIREVAVAAGKE 145
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ+ D+ EGK ++L+E+ IH+ KTG + S G I+ GG E++++ + ++ K
Sbjct: 146 GMVGGQVADLAGEGKSLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEDQVKALTDYAK 205
Query: 211 YVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
+G+A+Q+ +DI+D++G E K G D+ + K+TY L+G++G+ + I +A+
Sbjct: 206 ALGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGAAQQLHAQILKAQSS 265
Query: 270 LAYFDPTRAAPLDHLVNFI 288
L FD RA L+ L +I
Sbjct: 266 LEVFDE-RAVFLNQLALYI 283
>gi|255655210|ref|ZP_05400619.1| geranyltranstransferase [Clostridium difficile QCD-23m63]
gi|296451195|ref|ZP_06892936.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296880453|ref|ZP_06904415.1| Farnesyltranstransferase [Clostridium difficile NAP07]
gi|296260016|gb|EFH06870.1| Farnesyltranstransferase [Clostridium difficile NAP08]
gi|296428407|gb|EFH14292.1| Farnesyltranstransferase [Clostridium difficile NAP07]
Length = 295
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 162/264 (61%), Gaps = 16/264 (6%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSM 79
KA + + L E +P + + EAM YSL GGKRL L + +C+++GG++ A+
Sbjct: 10 KASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---- 135
A AIE++ T ++I DDLP LDNDDLRRG+P+NHKV+GEA ILA AL A + +
Sbjct: 70 AIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGS 129
Query: 136 -------AIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+KA N I G G+ GQ++D+ SE K++ +L++IH +KT +
Sbjct: 130 INKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGC 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
+ +G IGG N E++E + + K +G+++Q+ +DI+D++G ++ +K G D+ K+TY
Sbjct: 190 MRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDESKLGKKVGSDIENHKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQEL 270
P L+G+D SK+ A LI EAK+ +
Sbjct: 250 PSLLGLDKSKEIAHNLIDEAKKSI 273
>gi|118580818|ref|YP_902068.1| polyprenyl synthetase [Pelobacter propionicus DSM 2379]
gi|118503528|gb|ABL00011.1| farnesyl-diphosphate synthase [Pelobacter propionicus DSM 2379]
Length = 297
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 177/287 (61%), Gaps = 27/287 (9%)
Query: 26 QINEALDEAVP----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
+++ ALD +P LPH LH+AMRYS+ GGKR+ L +A+C+ +GG VA+ A
Sbjct: 13 RVDAALDSYLPRETELPHS--LHKAMRYSVFAGGKRVRPILMLAACQAVGGDTEVAIPAA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------- 133
CA+E++ T ++I DDLP +D+DD RRG P+NHKVFGEA AILA AL A +
Sbjct: 71 CAMEMIHTYSLIHDDLPAMDDDDFRRGNPTNHKVFGEAVAILAGDALLTEAFKLLSNPAC 130
Query: 134 --------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFI 184
+A+I I S GS G+ GQ++D+ SEGK ++ L + +IH HKTG I
Sbjct: 131 AAGVPSEARLAVI--HQIASCAGSHGMVGGQVVDMESEGKSDIDLPTVQYIHTHKTGALI 188
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDK 243
+A++V+G ++GG + E++ + +G G+A+Q+ +DI+D+ G+ E+ + G D R K
Sbjct: 189 KAAVVAGALLGGADREKLAAITRYGSAAGLAFQIADDILDIEGTTEEIGKDAGSDQARGK 248
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
ATYP ++G+ +K+ A ++ EA + L F + A PL + +IV+
Sbjct: 249 ATYPAVMGLAAAKQEATTMMDEAFKALEIFG-SEADPLREIARYIVT 294
>gi|126698801|ref|YP_001087698.1| geranyltranstransferase [Clostridium difficile 630]
gi|254974740|ref|ZP_05271212.1| geranyltranstransferase [Clostridium difficile QCD-66c26]
gi|255092129|ref|ZP_05321607.1| geranyltranstransferase [Clostridium difficile CIP 107932]
gi|255100220|ref|ZP_05329197.1| geranyltranstransferase [Clostridium difficile QCD-63q42]
gi|255306109|ref|ZP_05350281.1| geranyltranstransferase [Clostridium difficile ATCC 43255]
gi|255313866|ref|ZP_05355449.1| geranyltranstransferase [Clostridium difficile QCD-76w55]
gi|255516547|ref|ZP_05384223.1| geranyltranstransferase [Clostridium difficile QCD-97b34]
gi|255649647|ref|ZP_05396549.1| geranyltranstransferase [Clostridium difficile QCD-37x79]
gi|260682811|ref|YP_003214096.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260686409|ref|YP_003217542.1| geranyltranstransferase [Clostridium difficile R20291]
gi|306519764|ref|ZP_07406111.1| geranyltranstransferase [Clostridium difficile QCD-32g58]
gi|384360393|ref|YP_006198245.1| geranyltranstransferase [Clostridium difficile BI1]
gi|115250238|emb|CAJ68059.1| Geranyltranstransferase [Clostridium difficile 630]
gi|260208974|emb|CBA62025.1| geranyltranstransferase [Clostridium difficile CD196]
gi|260212425|emb|CBE03292.1| geranyltranstransferase [Clostridium difficile R20291]
Length = 295
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 162/264 (61%), Gaps = 16/264 (6%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSM 79
KA + + L E +P + + EAM YSL GGKRL L + +C+++GG++ A+
Sbjct: 10 KASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---- 135
A AIE++ T ++I DDLP LDNDDLRRG+P+NHKV+GEA ILA AL A + +
Sbjct: 70 AIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGS 129
Query: 136 -------AIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+KA N I G G+ GQ++D+ SE K++ +L++IH +KT +
Sbjct: 130 INKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGC 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
+ +G IGG N E++E + + K +G+++Q+ +DI+D++G ++ +K G D+ K+TY
Sbjct: 190 MRAGATIGGANSEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQEL 270
P L+G+D SK+ A LI EAK+ +
Sbjct: 250 PSLLGLDKSKEIAHNLIDEAKKSI 273
>gi|398803633|ref|ZP_10562651.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
gi|398095886|gb|EJL86217.1| geranylgeranyl pyrophosphate synthase [Polaromonas sp. CF318]
Length = 306
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 174/302 (57%), Gaps = 24/302 (7%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPH----PAILHEAMRYS-LPGGKRLMSTLC 62
+ LP F ++++ A + + AL V P PA L +AMRY+ L GGKRL L
Sbjct: 5 EKLP-LFTLSDWSAKQLATVESALSRWVACPTDSPAPAGLGDAMRYAVLDGGKRLRPLLV 63
Query: 63 IASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAIL 122
+A+CE +GG++ A+ ACA+EL+ +++ DD+PC+DND LRRGKP+ H FG+A A+L
Sbjct: 64 MAACEAVGGNREAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALL 123
Query: 123 ACQALHCLAMQHI--------AIIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSE 171
A AL LA + + A +A + + A G +G+A GQ +D+ S G + +
Sbjct: 124 AGDALQALAFEFLTPEDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGMPLDSQQ 183
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L+ +HR KTG +EAS++ G G + +R++G VG+A+Q+ +DI+DV
Sbjct: 184 LHEMHRLKTGALLEASVMMGAACGTVAPAAWQALRDYGSAVGLAFQVVDDILDVTADSAT 243
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT---RAAPLDHLVNF 287
KT G+D +DK T+ L+G++ SK +A++L+A A LA D T R L L +
Sbjct: 244 LGKTAGKDAAQDKPTFVSLMGLEASKAYAQQLLARA---LAGLDATGLARTEALRALADM 300
Query: 288 IV 289
+V
Sbjct: 301 LV 302
>gi|392409860|ref|YP_006446467.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
gi|390622996|gb|AFM24203.1| geranylgeranyl pyrophosphate synthase [Desulfomonile tiedjei DSM
6799]
Length = 299
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 171/290 (58%), Gaps = 18/290 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY + +ALD +P PA+LH+AMRYS+ GGKR+ L +A+ E++GGS
Sbjct: 6 IKEYMEARRDLAEKALDAMLPPEDNEPAVLHQAMRYSVFAGGKRIRPVLAMAAAEVVGGS 65
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A A+E + T ++I DDLP +DNDDLRRGKP+ HKVFGEA AILA AL +
Sbjct: 66 GKQVLPLAVALECIHTYSLIHDDLPAMDNDDLRRGKPTVHKVFGEAVAILAGDALLTYGL 125
Query: 133 QHIAI------IKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+++ +A+N+ +A+ GS + AGQ+MDI EGK+V + +I R+K
Sbjct: 126 GVLSLPEVSRTYRAENLLAAIRELALAAGSTRLIAGQVMDILCEGKDVDKHMVEYIVRNK 185
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRD 238
TG I AS+V G + G E IE + FG +GM +Q+ +D++D+ G P +M + +D
Sbjct: 186 TGALIRASLVCGATLVDGELERIEVLGKFGDLLGMIFQIRDDLLDIEGDPVKMGKAVQKD 245
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
R KAT P+L+G + +++ LI A+ + T A PL + ++I
Sbjct: 246 GDRGKATLPRLLGAERTEEIMYSLIRNAEDTIRPLGET-ANPLVQITHYI 294
>gi|415885447|ref|ZP_11547375.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
gi|387591116|gb|EIJ83435.1| Polyprenyl synthetase [Bacillus methanolicus MGA3]
Length = 296
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 149/244 (61%), Gaps = 14/244 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P+I+ E+M YSL GGKR+ L A+ G + A AIE++ T ++I DD
Sbjct: 27 LEAPSIIKESMLYSLEAGGKRIRPLLLFATLHAFGKDSKKGLHTAAAIEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---------AIIKAK---NI 143
LP +DNDD RRGKP+NHKVFGEA A+LA AL + Q I A IK K +
Sbjct: 87 LPSMDNDDFRRGKPTNHKVFGEAFAVLAGDALLTYSFQLICETPEEYAAADIKLKLIREL 146
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
+ A G+EG+ GQ+ DI EGK++ L++L +IH HKTGK + S+++G I+ N E+I+
Sbjct: 147 SKAAGAEGMVGGQVADIEGEGKQLHLTQLEYIHHHKTGKLLAYSVLAGAILARANVEQIK 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ F ++G+A+Q+ +DI+D+ G E+ K G D K+TYP ++ ++G+K+ E
Sbjct: 207 VLSQFAFHLGLAFQIRDDILDLEGQEELIGKPVGSDTNNHKSTYPSILSMEGAKEALTEH 266
Query: 263 IAEA 266
I +A
Sbjct: 267 IGKA 270
>gi|169333801|ref|ZP_02860994.1| hypothetical protein ANASTE_00187 [Anaerofustis stercorihominis DSM
17244]
gi|169259366|gb|EDS73332.1| polyprenyl synthetase [Anaerofustis stercorihominis DSM 17244]
Length = 294
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 166/271 (61%), Gaps = 17/271 (6%)
Query: 20 KALKAKQ--INEALDE-AVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
K LK KQ + + L + + P + E+ YSL GGKR+ L + SC+ +GG +
Sbjct: 5 KELKDKQSFVEDVLKKYTIKEGKPKSIFESFNYSLFVGGKRIRPILLMESCKCVGGDTNE 64
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
A+ + A+E++ T ++I DDLPC+D+D+LRRGKP+NH V+GEATA+LA +L LA + +
Sbjct: 65 ALPLMAAMEMIHTYSLIHDDLPCMDDDELRRGKPTNHTVYGEATALLAGDSLLNLAYETM 124
Query: 136 --AIIKAKNINSAV----------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
+K+IN V G +G+ AGQ+MD+ SEGKE L+FIH +KTG
Sbjct: 125 LKGAKSSKDINRYVEAMNVIADSAGVKGMIAGQVMDMESEGKEPDGETLDFIHDNKTGAI 184
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRD 242
+ AS++SG ++GG ++E++ + + + +G+ +Q+ +DI+DV+ E + +K G D R+
Sbjct: 185 LRASVISGAVVGGATDDELKNLSEYARAIGLMFQVVDDILDVVSDEETLGKKVGMDSERN 244
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
K TYP + G++ S + EL+ + L+ F
Sbjct: 245 KMTYPYVYGLERSYEKVDELLNISLNSLSDF 275
>gi|157273307|gb|ABV27206.1| geranylgeranyl diphosphate synthase [Candidatus Chloracidobacterium
thermophilum]
Length = 292
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 148/257 (57%), Gaps = 14/257 (5%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ Y A K ++N LD +P P +HEAMRYSL GGKRL L +A+ E GG+
Sbjct: 2 IEAYFAEKVPEVNRWLDRLMPPATTFPPRIHEAMRYSLMAGGKRLRPILVLAAGEAFGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ACA E++ T ++I DDLP +DNDDLRRG P+ HK F EATAILA L A
Sbjct: 62 PERLYPVACAFEMVHTYSLIHDDLPAMDNDDLRRGMPTCHKQFDEATAILAGDGLMTHAF 121
Query: 133 QHIAIIKAKNINS-------AVGS---EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+ +A + A AVGS EG+ AGQI+D+ +E K + L FIHR KTG
Sbjct: 122 RILAEMDAPAEQKVRVIRELAVGSGTVEGMIAGQIVDLEAERKPIDAERLKFIHRAKTGA 181
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMR 241
I ++V G I+ G E ++ + +G VG+A+Q+ +DI+D + E KT G+D
Sbjct: 182 LIRGAVVCGGIVAGATESDLALLAAYGDRVGLAFQIADDILDETATAEQLGKTPGKDAAA 241
Query: 242 DKATYPKLVGIDGSKKH 258
KATYP L G++ S+K
Sbjct: 242 GKATYPALYGLEASRKQ 258
>gi|224103129|ref|XP_002312936.1| predicted protein [Populus trichocarpa]
gi|222849344|gb|EEE86891.1| predicted protein [Populus trichocarpa]
Length = 314
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 174/304 (57%), Gaps = 30/304 (9%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LD+AVP+ +P ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 19 FDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLAKGAKRAPPVMCVAACELFGG 78
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ A ACA+E++ + ++I DDLPC+D+D RRG+PSNHK++G AILA AL L
Sbjct: 79 NRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHKIYGVDMAILAGDALFPLG 138
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI + I AVGS G+AAGQ +D+ E + + F+
Sbjct: 139 FRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFLDL-----EGGPNSVEFVQEK 193
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G ++ G ++EI+R+R +G+ VG+ YQ+ +DI++ + M+ K D
Sbjct: 194 KFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDILE---AKTMKSKVDED 250
Query: 239 MMRDKA-TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAA--PLDHLVNFIV----SF 291
+ K +Y L G++ + + A+EL A+AK+EL F+ + PL V++ SF
Sbjct: 251 KKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPLYSFVDYAADRGFSF 310
Query: 292 GNNN 295
G ++
Sbjct: 311 GESS 314
>gi|366166849|ref|ZP_09466604.1| farnesyl-diphosphate synthase [Acetivibrio cellulolyticus CD2]
Length = 297
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 153/263 (58%), Gaps = 17/263 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++ AMRYSL GGKRL L +A CE++GG + M ACAIE++ T ++I DDLP +DN
Sbjct: 32 VYSAMRYSLLAGGKRLRPVLALAVCELLGGDINEVMPFACAIEMVHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ-HIAIIKAKNINSAV------------- 147
DD RRGK +NHK FGEA AILA L LA + I N N+AV
Sbjct: 92 DDFRRGKLTNHKKFGEAIAILAGDGLLNLAFELMIESTATDNCNNAVQKVKAMSYIAKSS 151
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G G+ AGQ++D SE KEV+ L ++H+ KTG I+A +VS II +EE++ +
Sbjct: 152 GIHGMIAGQVIDTESENKEVAYETLEYMHKCKTGALIKAPVVSSAIICNASEEDLRSLEA 211
Query: 208 FGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+ +G+A+Q+ +DI+DV GS E + +K G D K TY L G++ SK+ +E EA
Sbjct: 212 YAGNLGLAFQIKDDILDVEGSTEKLGKKVGSDESNKKTTYVSLYGLEKSKQMLRETTEEA 271
Query: 267 KQELAYFDPTRAAPLDHLVNFIV 289
+ + F P A L L +++
Sbjct: 272 IKNIGKFGPN-ANFLRELAEYLI 293
>gi|423082397|ref|ZP_17070989.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
gi|423087809|ref|ZP_17076195.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357544123|gb|EHJ26129.1| putative geranyltranstransferase [Clostridium difficile
050-P50-2011]
gi|357548723|gb|EHJ30583.1| putative geranyltranstransferase [Clostridium difficile
002-P50-2011]
Length = 295
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 162/264 (61%), Gaps = 16/264 (6%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSM 79
KA + + L E +P + + EAM YSL GGKRL L + +C+++GG++ A+
Sbjct: 10 KASFVEKVLKEYMPKEEGYQKTVIEAMNYSLSAGGKRLRPILTLEACKIVGGNEDEAIPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---- 135
A AIE++ T ++I DDLP LDNDDLRRG+P+NHKV+GEA ILA AL A + +
Sbjct: 70 AIAIEMIHTYSLIHDDLPALDNDDLRRGRPTNHKVYGEAMGILAGDALLNYAFEVMLAGS 129
Query: 136 -------AIIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+KA N I G G+ GQ++D+ SE K++ +L++IH +KT +
Sbjct: 130 INKENPEKYLKAINEIAKGAGIYGMIGGQVVDVESENKQIEKEKLDYIHMNKTAAMMVGC 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
+ +G IGG N E++E + + K +G+++Q+ +DI+D++G ++ +K G D+ K+TY
Sbjct: 190 MRAGATIGGANFEQMEEITKYAKNIGLSFQIVDDILDIVGDEAKLGKKVGSDIENHKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQEL 270
P L+G+D SK+ A LI EAK+ +
Sbjct: 250 PSLLGLDKSKEIAHNLIDEAKKSI 273
>gi|350552260|ref|ZP_08921465.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
gi|349794913|gb|EGZ48721.1| Geranyltranstransferase [Thiorhodospira sibirica ATCC 700588]
Length = 294
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 164/277 (59%), Gaps = 21/277 (7%)
Query: 16 VNEYKALKAKQINEALDEAV--PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ EY+ ++I LD + P HPA LH+AMRYS + GGKR+ L A+ + +G
Sbjct: 5 LREYQ----QRIETVLDHWLQPPTTHPASLHQAMRYSAMDGGKRIRPILVYATAKALGVP 60
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S ACA+EL+ ++I DDLP +DNDDLRRG+P+ HK F EATAILA A+ LA
Sbjct: 61 LSCVDGPACAVELIHVYSLIHDDLPAMDNDDLRRGRPTCHKAFDEATAILAGDAMQALAF 120
Query: 133 Q------------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q + + + + A GS G+A GQ +D+ S G+++ L +L +H HKT
Sbjct: 121 QILVTDPEMTEDPKVRLRMMEILARASGSRGMAGGQAIDLASVGQQIDLVQLEDMHIHKT 180
Query: 181 GKFIEASIVSGVI-IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRD 238
G I AS++ G + + +E +E++ + K +G+A+Q+ +DI+DV E K G D
Sbjct: 181 GALIRASVLLGALSLVEIDEVRLEKLDRYAKCIGLAFQIRDDILDVESDTETLGKPQGSD 240
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP 275
M ++K TYP L+G++ SK+ A+EL+ +A + ++ P
Sbjct: 241 MAQNKPTYPALIGMEASKQRARELVDDALESISPLGP 277
>gi|322434675|ref|YP_004216887.1| polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
gi|321162402|gb|ADW68107.1| Polyprenyl synthetase [Granulicella tundricola MP5ACTX9]
Length = 320
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 173/307 (56%), Gaps = 38/307 (12%)
Query: 24 AKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS------QS 74
A + AL+ +P P P +H AMR+S GGKRL L + + M+ G ++
Sbjct: 15 ATLTDAALERLLPAPDTLPHSIHRAMRHSTFAGGKRLRPILALEAARMVSGGTLTPALET 74
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
A + A+E++ T ++I DDLP LDNDDLRRG+P+ H VFGEATAILA AL LA Q
Sbjct: 75 AAAELGAALEMIHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQT 134
Query: 135 IAIIKA---------KNINSAVGS-------------EGIAAGQIMDINSEGKEVSLSEL 172
IA + A + +++AV + G+ GQ+MDI SEG + + +
Sbjct: 135 IANLHAPAATVVSILREVSAAVATGVGSVGDLHTSLPPGMIGGQVMDIESEGVKPTAELV 194
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNE-----EEIERMRNFGKYVGMAYQLWNDIVDVI- 226
IHR KTG I S+V+G ++G G++ + I R+R FG+ G+A+Q+ +D++D+
Sbjct: 195 EAIHRAKTGALITVSVVAGGLLGLGDQPSTTHDTIARLRTFGQKAGLAFQIVDDVLDMTQ 254
Query: 227 GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVN 286
S ++ + G+D DKAT+P + GI S A+ELIA+A LA F T AAPL L N
Sbjct: 255 DSAQLGKTAGKDTATDKATWPAVFGIPQSIHDAEELIADAFAALARFAET-AAPLKALAN 313
Query: 287 FIVSFGN 293
F+ N
Sbjct: 314 FLTERKN 320
>gi|404496792|ref|YP_006720898.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|418065257|ref|ZP_12702631.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
gi|78194397|gb|ABB32164.1| trans-isoprenyl diphosphate synthase [Geobacter metallireducens
GS-15]
gi|373562435|gb|EHP88646.1| Polyprenyl synthetase [Geobacter metallireducens RCH3]
Length = 297
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 175/282 (62%), Gaps = 19/282 (6%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EAL+ ++P P +H AMRYS+ GGKR+ L +A+CE +GG+ +A+ ACA+
Sbjct: 14 VDEALERSLPGEGDLPVSVHRAMRYSVFAGGKRIRPVLMLAACEAVGGTPDLALPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL------------HCLA 131
E++ T ++I DDLP +D+DD RRG+P+NHKVFGEA AILA AL +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDALLTEAFILMSSPEYAAK 133
Query: 132 MQHIAIIKA-KNINSAVGSEGIAAGQIMDINSEG-KEVSLSELNFIHRHKTGKFIEASIV 189
H I+ I GS G+ GQ++D+ SEG K++ L+ + +IH HKTG ++AS+
Sbjct: 134 AGHARILPVIHEIGICAGSRGMVGGQVVDMESEGKKDIDLATVQYIHTHKTGALMKASVK 193
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPK 248
+G I+GG + + M +G+ +G+A+Q+ +DI+D+ G+ E K G D R KATYP
Sbjct: 194 AGAILGGAEGDALAAMTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPA 253
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++G+ SK+ A+EL+ A + L+ F +A PL + +IVS
Sbjct: 254 VMGLADSKRRAQELVDLALEALSPFG-EKAEPLREIARYIVS 294
>gi|225873275|ref|YP_002754734.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
gi|225791637|gb|ACO31727.1| geranylgeranyl diphosphate synthase [Acidobacterium capsulatum ATCC
51196]
Length = 300
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 165/297 (55%), Gaps = 18/297 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
V E + + AL+ +P P P+ +H A+R+S GGKRL L + + +
Sbjct: 5 IDVTEILRAGVEATDAALERLLPAPDAVPSSIHRAIRHSTFAGGKRLRPVLAMEAARTLR 64
Query: 71 GSQSVAMS---MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
+++ + AIE+L T ++I DDLP LDNDDLRRGKP+ H VFGEA AILA AL
Sbjct: 65 RDRALPAGVEDLGAAIEMLHTYSLIHDDLPALDNDDLRRGKPTCHVVFGEAIAILAGDAL 124
Query: 128 HCLAMQHIAIIKA---------KNINSAVGS-EGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA Q +A ++ + I A G+ EG+ GQ++D+ EG + ++ IHR
Sbjct: 125 QTLAYQTLAQLRCPAPATVEIIRLIAEATGTVEGMIGGQVLDLEGEGTRPTAESVDAIHR 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTG 236
KTG I SIV+G + G E++ER+ FG+ G+A+Q+ +D++D+ S + + G
Sbjct: 185 AKTGALIRVSIVTGGVYAGATPEDVERLTIFGRKAGLAFQIVDDVLDMTQDSAHLGKTAG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D+ DKAT+P + GI+ S++ A LI EA L + P A L + F+V N
Sbjct: 245 KDLATDKATWPAVFGIEASRRDAARLIDEAFAALEPYGPA-ADGLKTVARFLVERTN 300
>gi|332653017|ref|ZP_08418762.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
gi|332518163|gb|EGJ47766.1| geranyltranstransferase [Ruminococcaceae bacterium D16]
Length = 293
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 169/288 (58%), Gaps = 22/288 (7%)
Query: 19 YKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA 76
Y+A +A+ + EAL E V + A L EAM YSL GGKR+ L + SC M GG VA
Sbjct: 10 YEAAQAR-VEEALRERVGQMGRYADLREAMEYSLMAGGKRIRPVLVLESCRMCGGDPEVA 68
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI- 135
+ ACA+E++ T ++I DDLP +D+D+LRRG+P+NH V+GEATAILA L A Q +
Sbjct: 69 LPFACAVEMIHTYSLIHDDLPAMDDDELRRGRPTNHMVYGEATAILAGDGLLTAAFQTLT 128
Query: 136 -AIIKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
A + A+ + AV G +G+ GQ +D+ EG+ ++ +EL + KTG I A+
Sbjct: 129 QAQLTAQQVVDAVACLSLAAGPDGMVGGQALDMAGEGRSLTRAELEQLQSLKTGALIAAA 188
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
G I GG+ E+ E +R + + +G A+Q+ +DI+DV + E+ + TG D ++K T+
Sbjct: 189 AELGCIAAGGSPEQRESVRQYAQCLGRAFQVQDDILDVTSTDEELGKPTGSDREKEKNTF 248
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
L+G+D S++ EL A+A L F A+P +F+V N
Sbjct: 249 VSLLGLDRSRELVAELTAQAVSALDGF----ASP-----DFLVWLANT 287
>gi|225174881|ref|ZP_03728878.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169521|gb|EEG78318.1| Polyprenyl synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 293
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/265 (41%), Positives = 168/265 (63%), Gaps = 16/265 (6%)
Query: 25 KQINEALDEAVPL--PHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
K ++EAL+ +P P +H A+RYS GGKRL L +A+ E+ G + A+ AC
Sbjct: 10 KDVDEALERLIPAEDTFPQEIHRAVRYSVFAGGKRLRPLLTLAAAEIFGVPRLHALPAAC 69
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
AIE++ T ++I DDLP LD+DD RRG+ SNHKVFG+A AILA +L LA + +A
Sbjct: 70 AIEMVHTYSLIHDDLPALDDDDYRRGRLSNHKVFGDAMAILAGDSLLTLAFETLAAEATA 129
Query: 137 -------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + + A G G+ GQ++D+ SEGK+V+ + L++IHRHKTG I
Sbjct: 130 YFAPATVVRLTEALGKAAGMSGMIGGQVVDLLSEGKQVNAATLDYIHRHKTGALFTCCIK 189
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPK 248
SG I+GG + EE++R+ F + +G+A+Q+ +DI+D+ G + +KTG D R KATYP
Sbjct: 190 SGAIMGGASLEEMQRLTVFAQNIGLAFQIVDDILDITGDEAALGKKTGADQNRQKATYPA 249
Query: 249 LVGIDGSKKHAKELIAEAKQELAYF 273
L G+ +++ A++L++ A++E+ YF
Sbjct: 250 LYGLKQAEEKARDLLSAAEKEMEYF 274
>gi|229192390|ref|ZP_04319353.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
gi|228590967|gb|EEK48823.1| Geranyltranstransferase [Bacillus cereus ATCC 10876]
Length = 296
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P++L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPSVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLFNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|301063042|ref|ZP_07203607.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
gi|300442923|gb|EFK07123.1| putative geranyltranstransferase [delta proteobacterium NaphS2]
Length = 302
Score = 183 bits (464), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/296 (40%), Positives = 166/296 (56%), Gaps = 18/296 (6%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCE 67
P F + Y K Q++ ALDE P L +AMRYSL GGKRL LCIA E
Sbjct: 4 PMDFDLKVYLEEKRVQVDAALDEYFPKGDGLTTALIKAMRYSLFAGGKRLRPILCIAGAE 63
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
+GG + +ACA+EL+ T ++I DDLP +D+DDLRRGKP+NHKVFGEA A+LA L
Sbjct: 64 AVGGVGQRVLPVACAVELIHTYSLIHDDLPVMDDDDLRRGKPTNHKVFGEAIALLAGDGL 123
Query: 128 HCLAMQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
A + KA I A G EG+ GQ++DI EGK + F
Sbjct: 124 LTEAFSLMTSPKATENIEPPGLLEVIQIIAVAAGCEGMVGGQVVDILWEGKNAEFETVKF 183
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MRE 233
+H HKTG I AS++SG I G E ++ ++G +G+A+Q+ +DI+DV G E M +
Sbjct: 184 LHTHKTGAMIRASVMSGAIAAGARESVVQHFSSYGHKIGLAFQISDDILDVEGDSEIMGK 243
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
G D + K TYP ++G+D SKK + L+ +A Q+L F A PL + +I+
Sbjct: 244 MAGADEGKGKTTYPSVLGMDESKKIQEALVRDAVQDLEVFGDA-AEPLRKIAYYII 298
>gi|374296391|ref|YP_005046582.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
gi|359825885|gb|AEV68658.1| geranylgeranyl pyrophosphate synthase [Clostridium clariflavum DSM
19732]
Length = 296
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 155/262 (59%), Gaps = 16/262 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++ AMRYSL GGKRL L +A C+M+GG + ACA+E++ T ++I DDLP +DN
Sbjct: 32 IYNAMRYSLLAGGKRLRPVLSLAVCDMLGGDLKEVLPYACAVEMIHTYSLIHDDLPSMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS-------------AVG 148
DD RRGK +NHKVFGEA AILA L +A + + + N N+ + G
Sbjct: 92 DDYRRGKLTNHKVFGEALAILAGDGLLNMAFELMLENTSSNCNNIENKVKAMGYIAKSSG 151
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ++DI SE EVS+ L ++HR KTG I+AS++S II + E+I+ + N+
Sbjct: 152 VRGMIGGQVVDIESENNEVSVETLEYMHRLKTGALIKASVISAAIICNASNEDIQNLENY 211
Query: 209 GKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
+ +G+A+Q+ +DI+DV G+ ++ + G D K TY + G++ SK+ E+ A
Sbjct: 212 AEGIGLAFQIKDDILDVEGNIDKLGKNVGSDASNKKTTYVSIYGLEKSKQMLTEITESAI 271
Query: 268 QELAYFDPTRAAPLDHLVNFIV 289
+ L F +AA L L ++V
Sbjct: 272 KSLDSF-GGKAAFLKELAEYLV 292
>gi|158521674|ref|YP_001529544.1| polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
gi|158510500|gb|ABW67467.1| Polyprenyl synthetase [Desulfococcus oleovorans Hxd3]
Length = 295
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 168/289 (58%), Gaps = 16/289 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+ Y A + K +NEALD + P L AMR+SL GGKRL LC+A+ E +GG+
Sbjct: 4 LETYLARRQKAVNEALDRILADCVPGGRLFSAMRHSLKAGGKRLRPILCMAAAEAVGGTW 63
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+ CAIEL+ T +++ DDLP +DND LRRG+P+ H F EATAI A ALH LA +
Sbjct: 64 EDALFPGCAIELIHTYSLVHDDLPAIDNDPLRRGQPACHAAFDEATAIFAGDALHTLAFE 123
Query: 134 HIA-----IIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
++ + K I+ A G+ G+ GQ+ DI ++G + L +L +HR KTG
Sbjct: 124 VLSSDRYIFFQGKRRLALIHLISRATGNHGMIEGQMRDILAQGGNLGLDQLKELHRLKTG 183
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
I AS+ +G + G + ++ + + +G+A+Q+ +D+++V G P + K+ G D +
Sbjct: 184 ALITASVHAGALTGKATVRQTGKLIEYAENIGLAFQVADDLLNVEGDPLLTGKSIGTDHV 243
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KAT+P L+GID S+K A +L+ ++ Q + +A PL + +++
Sbjct: 244 LGKATFPNLMGIDASRKFAAQLVEKSLQAIESLG-IKANPLRAVAKYVI 291
>gi|374993734|ref|YP_004969233.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
gi|357212100|gb|AET66718.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus orientis
DSM 765]
Length = 288
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 151/244 (61%), Gaps = 12/244 (4%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
+++E+MRYSL GGKR+ L +AS E +GG + A A+EL+ T ++I DDLP +D
Sbjct: 26 LINESMRYSLIGGGKRIRPVLALASAETVGGKPEAILQAAVALELIHTYSLIHDDLPAMD 85
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK----------AKNINSAVGSE 150
NDD RRG+ SNHKVFGEA AILA AL A + + + + A G +
Sbjct: 86 NDDYRRGRLSNHKVFGEAQAILAGDALLTYAFELLGNLDHAQPERLLRVITEVAMAAGKD 145
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ++D+ EG++++L+E+ IH+ KTG + S G I+GGG+E+EI+ + + +
Sbjct: 146 GMVGGQVLDLAGEGRDLTLNEIEEIHKAKTGAILTVSARLGGILGGGSEDEIDALTEYAQ 205
Query: 211 YVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
+G+A+Q+ +DI+D++G E K G D+ + K+TY L+G++G+ K + I +A+
Sbjct: 206 SLGLAFQIKDDILDIVGDSETLGKPAGSDLRQGKSTYVSLLGLEGASKQLHDQIIKAQAA 265
Query: 270 LAYF 273
L F
Sbjct: 266 LEPF 269
>gi|38455333|gb|AAR20832.1| geranylgeranyl diphosphate synthase [Taxus x media]
Length = 180
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 14/176 (7%)
Query: 47 MRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLR 105
MRYSL GGKR+ LCIA+CE++GGSQ +AM ACA+E++ TM++I DDLPC+DNDD R
Sbjct: 1 MRYSLLAGGKRVRPALCIAACELVGGSQDLAMPTACAMEMIHTMSLIHDDLPCMDNDDFR 60
Query: 106 RGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AVGSEGIA 153
RGKP+NHKVFGE TA+LA AL A +HIA+ +K + S + S+G+
Sbjct: 61 RGKPTNHKVFGEDTAVLAGDALLSFAFEHIAVATSKTVPSDRTLRVISELGKTISSQGLV 120
Query: 154 AGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
GQ++DI SEG V L L +IH HKT +E S+V+G I+GG E+EI R+R +
Sbjct: 121 GGQVVDITSEGDANVDLKTLEWIHIHKTAVLLECSVVNGGILGGATEDEIARIRRY 176
>gi|6016394|sp|O66126.1|ISPA_MICLU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|2982677|dbj|BAA25265.1| farnesyl diphosphate synthase [Micrococcus luteus]
Length = 291
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 163/276 (59%), Gaps = 17/276 (6%)
Query: 27 INEALDEAVPLPHPAI--LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
INE+L + HPA LHEA+ YSL GGKR+ L + + + +GG+ + A+
Sbjct: 16 INESL---LNKYHPAQSRLHEAINYSLSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIAL 72
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------AI 137
E++ T ++I DDLP +DNDD RRGK +NHK F EATAILA AL A Q I A
Sbjct: 73 EMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILNTQLNAE 132
Query: 138 IKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVII 194
IK IN +A GS G+ GQ++D+ E K ++L+EL IH HKTG+ I A+IVS II
Sbjct: 133 IKLSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGII 192
Query: 195 GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGID 253
N+ +IE++ GK VG+ +Q+ +DI+DV GS E KT G D+ DK+TY L+G++
Sbjct: 193 MNFNDAQIEQLNIIGKNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLE 252
Query: 254 GSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
SK+ + + E L P L L+ +IV
Sbjct: 253 ASKQLLNDKLTETYDALKTLQPIN-DNLKTLITYIV 287
>gi|374312746|ref|YP_005059176.1| geranyltranstransferase [Granulicella mallensis MP5ACTX8]
gi|358754756|gb|AEU38146.1| Geranyltranstransferase [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/292 (40%), Positives = 162/292 (55%), Gaps = 44/292 (15%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMI--------------GGSQSVAMSMACAIE 84
P +H AMR+S GGKRL LC+ + +M+ G + VA ++A A+E
Sbjct: 31 PYSIHRAMRHSTFAGGKRLRPILCMEAAKMVASTDFYPPEEAAPAGHPEGVA-NLAAALE 89
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA---- 140
+L T ++I DDLP LDNDDLRRG+P+ H VFGEATAILA AL LA Q IA + A
Sbjct: 90 MLHTYSLIHDDLPALDNDDLRRGQPTCHVVFGEATAILAGDALQTLAFQTIASLPAPPEA 149
Query: 141 -----KNINSAVGS-------------EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+ I+ ++G+ G+ GQ++DI SEG + + + IHR KTG
Sbjct: 150 VVAILRKISLSIGTGIGRWGDHDTGIAPGMIGGQVVDIESEGTKPTPDLVEAIHRAKTGA 209
Query: 183 FIEASIVSGVIIG----GGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
I SIV+G I G G ER+R FG+ G+A+Q+ +D++D+ S E KT G+
Sbjct: 210 LITVSIVAGAIYGSSRHGLPSSYHERIRTFGEKAGLAFQIVDDVLDMTQSSEELGKTAGK 269
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D DKAT+P + GI+ SK A ELIA+A L F A PL L ++V
Sbjct: 270 DTATDKATWPAVFGIEQSKHDAAELIADAFAALEPFG-DAATPLKSLAQYLV 320
>gi|187735758|ref|YP_001877870.1| polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425810|gb|ACD05089.1| Polyprenyl synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 297
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 163/289 (56%), Gaps = 14/289 (4%)
Query: 16 VNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+N+Y + I+ ALD +P P +H+AMRYS+ GGKR+ LC+A+ E GG
Sbjct: 6 LNDYITEQCALIDAALDRLLPAEDESPETIHKAMRYSIFAGGKRMRPVLCLAAAEACGGL 65
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E++ T ++I DDLP +DNDDLRRGKP++HK FGE AILA AL A
Sbjct: 66 AVDALVPACAVEMMHTYSLIHDDLPAMDNDDLRRGKPTSHKAFGEGVAILAGDALLTEAF 125
Query: 133 QHIAIIK----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
IA + + + + GS + GQI+D+ E K++S E+ ++ KT
Sbjct: 126 AVIAQVDDTERYTVRDYVRELAATGGSTMLIGGQILDLEGEHKQLSEPEVRTVYEGKTAA 185
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMR 241
+ ++ G + E ++E + +FG +G+A+Q+ +DI+D+ S E KT G+D+
Sbjct: 186 LLTTALRFGGMSANATESQLEALTDFGYNLGLAFQVIDDILDLTASTEKLGKTAGKDVNS 245
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K+T P L+G+DG++ AK A L F R A L L N++++
Sbjct: 246 QKSTCPALIGLDGARSEAKCRTQAALDALMIFPEERRARLVELANYLLN 294
>gi|408356541|ref|YP_006845072.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
gi|407727312|dbj|BAM47310.1| polyprenyl diphosphate synthase [Amphibacillus xylanus NBRC 15112]
Length = 294
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 156/255 (61%), Gaps = 13/255 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
F Y + IN +L E++ L P+ L +M YS+ GGKR+ L IAS E GG
Sbjct: 3 FNFRNYLEANLEFINHSLIESIEKLSIPSTLKASMLYSIKAGGKRIRPILMIASVEAFGG 62
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ + A A+EL+ T ++I DDLP +D+D+LRRG+P+NH FGEATAILA +L LA
Sbjct: 63 KKEDVLPAAIALELVHTYSLIHDDLPAMDDDNLRRGQPTNHIEFGEATAILAGDSLLTLA 122
Query: 132 MQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q I+ + K ++ A G G+ AGQI+D+ +E ++V+LSEL IHR KTG
Sbjct: 123 FQVISEAENLTAEQKVTIIKRLSMASGPTGMVAGQILDLEAEERQVNLSELEQIHRLKTG 182
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
+ + ++ G + G +E+++ +R FG ++G+ +Q+ +DI+D+ G + + + G D
Sbjct: 183 ELLIFAVEIGAYLAGAAQEQLKAIREFGHHIGLIFQIQDDILDIEGDEQKLGKAVGSDQE 242
Query: 241 RDKATYPKLVGIDGS 255
K+TYPKL+GI+G+
Sbjct: 243 NKKSTYPKLLGIEGA 257
>gi|228910014|ref|ZP_04073834.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
gi|228849531|gb|EEM94365.1| Geranyltranstransferase [Bacillus thuringiensis IBL 200]
Length = 296
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGLGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|228960446|ref|ZP_04122097.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|423630903|ref|ZP_17606650.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
gi|228799210|gb|EEM46176.1| Geranyltranstransferase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|401264270|gb|EJR70382.1| hypothetical protein IK5_03753 [Bacillus cereus VD154]
Length = 296
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+++EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMDAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|228922933|ref|ZP_04086227.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|423582390|ref|ZP_17558501.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|423634993|ref|ZP_17610646.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
gi|228836704|gb|EEM82051.1| Geranyltranstransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213269|gb|EJR20010.1| hypothetical protein IIA_03905 [Bacillus cereus VD014]
gi|401278979|gb|EJR84909.1| hypothetical protein IK7_01402 [Bacillus cereus VD156]
Length = 296
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L ID +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTIDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|220934012|ref|YP_002512911.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995322|gb|ACL71924.1| farnesyl-diphosphate synthase [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 299
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 160/270 (59%), Gaps = 18/270 (6%)
Query: 21 ALKAKQINEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAM 77
AL+A+ + +ALD +P HPA LHEAMRYS L GGKR+ L + + +G +
Sbjct: 12 ALRAR-LEQALDRWIPAETTHPARLHEAMRYSALGGGKRVRPVLVYGAGQALGVAPERLD 70
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA- 136
ACA+EL+ ++I DDLP +DNDDLRRGKP+ HK F EA AILA A+ LA Q ++
Sbjct: 71 GPACAVELIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEAMAILAGDAMQALAFQILSM 130
Query: 137 -----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+ + + A GS G+A GQ +D+ S GK++ +++L +H HKTG I
Sbjct: 131 DPDMLDDPARRLRMMETLARAAGSRGMAGGQAIDLGSVGKQLDIAQLEDMHVHKTGALIR 190
Query: 186 ASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
AS++ G + ++ +E + F K VG+A+Q+ +DI+DV G KT G D +K
Sbjct: 191 ASVLLGALSAPEVDKAHLENLDRFAKCVGLAFQIRDDILDVEGDTATLGKTQGADQALNK 250
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
TYP L+G++ S++ A+EL+ +A L F
Sbjct: 251 PTYPALIGLEESRQAARELVDQALGALEGF 280
>gi|229047874|ref|ZP_04193450.1| Geranyltranstransferase [Bacillus cereus AH676]
gi|228723331|gb|EEL74700.1| Geranyltranstransferase [Bacillus cereus AH676]
Length = 296
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K+ +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKEILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|423483771|ref|ZP_17460461.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
gi|401141322|gb|EJQ48877.1| hypothetical protein IEQ_03549 [Bacillus cereus BAG6X1-2]
Length = 297
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVFEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK +++SEL +IH+HKTGK +E ++++G II EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTISELEYIHKHKTGKLLEFAVLAGAIISDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGIEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|75763306|ref|ZP_00743052.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971164|ref|ZP_03232115.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218899342|ref|YP_002447753.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228902696|ref|ZP_04066843.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|228941339|ref|ZP_04103891.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228954464|ref|ZP_04116489.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228967219|ref|ZP_04128255.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974271|ref|ZP_04134840.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980864|ref|ZP_04141168.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|229071685|ref|ZP_04204901.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|229081437|ref|ZP_04213937.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|229180458|ref|ZP_04307800.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|365159033|ref|ZP_09355220.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188250|ref|YP_005574146.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564407|ref|YP_006607131.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|410676567|ref|YP_006928938.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|423358781|ref|ZP_17336284.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|423385682|ref|ZP_17362938.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|423412017|ref|ZP_17389137.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|423426314|ref|ZP_17403345.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|423432198|ref|ZP_17409202.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|423437632|ref|ZP_17414613.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|423503133|ref|ZP_17479725.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|423527962|ref|ZP_17504407.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|423561345|ref|ZP_17537621.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|434377303|ref|YP_006611947.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|449091138|ref|YP_007423579.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200639|ref|YP_007480720.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|74489206|gb|EAO52676.1| Dimethylallyltransferase / Geranyltranstransferase /
Geranylgeranyl pyrophosphate synthetase [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|206733936|gb|EDZ51107.1| geranyltranstransferase [Bacillus cereus AH1134]
gi|218540759|gb|ACK93153.1| geranyltranstransferase [Bacillus cereus G9842]
gi|228602882|gb|EEK60361.1| Geranyltranstransferase [Bacillus cereus 172560W]
gi|228701852|gb|EEL54338.1| Geranyltranstransferase [Bacillus cereus Rock4-2]
gi|228711416|gb|EEL63375.1| Geranyltranstransferase [Bacillus cereus F65185]
gi|228778800|gb|EEM27063.1| Geranyltranstransferase [Bacillus thuringiensis Bt407]
gi|228785321|gb|EEM33331.1| Geranyltranstransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792588|gb|EEM40154.1| Geranyltranstransferase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228805121|gb|EEM51715.1| Geranyltranstransferase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228818265|gb|EEM64338.1| Geranyltranstransferase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228856883|gb|EEN01396.1| Geranyltranstransferase [Bacillus thuringiensis IBL 4222]
gi|326941959|gb|AEA17855.1| dimethylallyltransferase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|363626022|gb|EHL77031.1| hypothetical protein HMPREF1014_00683 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084653|gb|EJP92899.1| hypothetical protein IC1_00761 [Bacillus cereus VD022]
gi|401104085|gb|EJQ12062.1| hypothetical protein IE1_01321 [Bacillus cereus BAG3O-2]
gi|401111061|gb|EJQ18960.1| hypothetical protein IE5_04003 [Bacillus cereus BAG3X2-2]
gi|401116954|gb|EJQ24792.1| hypothetical protein IE7_04014 [Bacillus cereus BAG4O-1]
gi|401120787|gb|EJQ28583.1| hypothetical protein IE9_03813 [Bacillus cereus BAG4X12-1]
gi|401201602|gb|EJR08467.1| hypothetical protein II5_00749 [Bacillus cereus MSX-A1]
gi|401635738|gb|EJS53493.1| hypothetical protein ICE_03428 [Bacillus cereus BAG1X1-2]
gi|401793059|gb|AFQ19098.1| dimethylallyltransferase [Bacillus thuringiensis HD-771]
gi|401875860|gb|AFQ28027.1| dimethylallyltransferase [Bacillus thuringiensis HD-789]
gi|402451625|gb|EJV83444.1| hypothetical protein IGE_01514 [Bacillus cereus HuB1-1]
gi|402459354|gb|EJV91091.1| hypothetical protein IG1_00699 [Bacillus cereus HD73]
gi|409175696|gb|AFV20001.1| farnesyl diphosphate synthase IspA [Bacillus thuringiensis Bt407]
gi|449024895|gb|AGE80058.1| Dimethylallyltransferase / Geranyltranstransferase / Geranylgeranyl
pyrophosphate synthetase [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452106032|gb|AGG02972.1| (2E,6E)-farnesyl diphosphate synthase [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 296
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|386714769|ref|YP_006181092.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
gi|384074325|emb|CCG45818.1| geranyltranstransferase [Halobacillus halophilus DSM 2266]
Length = 294
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 158/268 (58%), Gaps = 13/268 (4%)
Query: 16 VNEYKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+++Y K + INE L V P L +AM YS+ GGKRL L IA+ E G
Sbjct: 5 LSDYLLEKRQLINEQLIHYVRDYTVPGRLQDAMLYSIEAGGKRLRPILLIATAEAFGAKV 64
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
M++AC +E++ T ++I DDLP +DNDD RRG P++H+ F EATAILA AL L+ +
Sbjct: 65 DKTMAVACGLEMIHTYSLIHDDLPAMDNDDFRRGLPTSHRRFDEATAILAGDALLTLSSE 124
Query: 134 HIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
I + + ++ A G+ G+ GQ+ D+ SE K++ L EL IH+ KTGK
Sbjct: 125 IIVNDQELNDRERVFLIQELSRASGASGMVEGQMQDMLSEDKQIPLEELENIHKKKTGKL 184
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRD 242
+ +I++G +G ++E+ + M+ G+ +G+ +Q+ +DI+DV G E + + G D
Sbjct: 185 LNFAIIAGAFLGNASDEKFDEMKKMGEALGLIFQIQDDILDVTGDAEKIGKPVGSDEGNR 244
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQEL 270
K+TYP+L+G+DG++ + + EA+ L
Sbjct: 245 KSTYPQLLGLDGARTQMESYVDEAQSAL 272
>gi|435853309|ref|YP_007314628.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
gi|433669720|gb|AGB40535.1| geranylgeranyl pyrophosphate synthase [Halobacteroides halobius DSM
5150]
Length = 293
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 178/290 (61%), Gaps = 15/290 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
+VN+ KAK IN+ L+E +P+ P L +AMRYS L GGKRL L + ++IG
Sbjct: 1 MKVNQVITKKAKLINQTLEELLPMEEAKPKKLSQAMRYSVLAGGKRLRPILTLLVAKLIG 60
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ + ACA+E++ ++I DDLPC+D+DD RRG+P+NHKV+GEA A+LA +L L
Sbjct: 61 EEEKKVLPAACALEMIHNYSLIHDDLPCMDDDDYRRGQPTNHKVYGEAMAVLAGDSLLTL 120
Query: 131 AMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A + I+ ++ + + A G++G+ GQ DI +EG+++ L +IH HKT
Sbjct: 121 AFETISRINNIDQDKVLLATQELAIAAGNQGMVGGQAADIVAEGQKIDKEGLEYIHTHKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G + A++ G I+ G N+EE+ + + + +G+A+Q+ +DI+D+ G E + + G D+
Sbjct: 181 GALLRAAVRIGAILAGANKEELAALTTYAQKIGLAFQVVDDILDIEGDEEKLGKDVGSDL 240
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
RDKAT+P L G++ +KK A++L EAK+ + F A L L ++I+
Sbjct: 241 ERDKATFPALYGLEEAKKMAQKLCQEAKEAIHIFGE-EAKVLLELADYII 289
>gi|218235767|ref|YP_002368981.1| geranyltranstransferase [Bacillus cereus B4264]
gi|229129458|ref|ZP_04258429.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|229146753|ref|ZP_04275118.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|229152380|ref|ZP_04280572.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|296504667|ref|YP_003666367.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|423640739|ref|ZP_17616357.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|423650045|ref|ZP_17625615.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|423657123|ref|ZP_17632422.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
gi|218163724|gb|ACK63716.1| geranyltranstransferase [Bacillus cereus B4264]
gi|228630988|gb|EEK87625.1| Geranyltranstransferase [Bacillus cereus m1550]
gi|228636581|gb|EEK93046.1| Geranyltranstransferase [Bacillus cereus BDRD-ST24]
gi|228654063|gb|EEL09930.1| Geranyltranstransferase [Bacillus cereus BDRD-Cer4]
gi|296325719|gb|ADH08647.1| dimethylallyltransferase [Bacillus thuringiensis BMB171]
gi|401279800|gb|EJR85722.1| hypothetical protein IK9_00684 [Bacillus cereus VD166]
gi|401282463|gb|EJR88362.1| hypothetical protein IKA_03832 [Bacillus cereus VD169]
gi|401289866|gb|EJR95570.1| hypothetical protein IKG_04111 [Bacillus cereus VD200]
Length = 296
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|735880|gb|AAA81879.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
Length = 326
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 136/226 (60%), Gaps = 20/226 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LP-GGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEA+P+ HPA ++EAMRYS LP G KR +C+A+CE+ GG
Sbjct: 45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLPQGPKRAPPVMCVAACELFGG 104
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D +RRGKPSNH V+G AILA AL LA
Sbjct: 105 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLA 164
Query: 132 MQHI------------AIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI I++ I VGS G+AAGQ +D+ EG LS F+
Sbjct: 165 FQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FVQEK 219
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K G E S V G ++GG E+E++ +R +G+ VGM YQ+ +DI +
Sbjct: 220 KFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITE 265
>gi|406911096|gb|EKD50966.1| Polyprenyl synthetase [uncultured bacterium]
Length = 297
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 163/296 (55%), Gaps = 17/296 (5%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH---PAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
F + +Y K I+ AL H P L +AM YSL GKR+ L AS + +
Sbjct: 3 FDLKDYFTQKKTVIDTALKAHWINDHHIRPKELLDAMEYSLFAPGKRIRPVLVFASTQTL 62
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL-- 127
+ + +A A+E++ ++I DDLP +DNDDLRRG+P+NHKVFGEA AILA AL
Sbjct: 63 NMPEEDVIPLAGALEMIHAFSLIHDDLPSMDNDDLRRGRPTNHKVFGEALAILAGDALLS 122
Query: 128 HCLAM---------QHIAIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
H + H II + A G+ G+ +GQ+ D+ SE + +SL EL +HR
Sbjct: 123 HAFTVLSDLDTEKYPHENIIDVIHHFAKATGTCGMISGQVWDMQSENRIISLDELQNLHR 182
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGR 237
HKTG I ++ S ++ G + ++ + + + +G+ +Q+ +DI+D+ G + + G
Sbjct: 183 HKTGALITLAVTSPAVLKGAEPDVMDCLIRYSEAIGLCFQVVDDILDIEGDESLGKPIGS 242
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
D ++K+TYP L+G+DG+KK AK L+ A L FD RA PL + FI N
Sbjct: 243 DQAKNKSTYPALLGLDGAKKEAKRLLEVALASLTSFD-ERADPLRAIARFIAERRN 297
>gi|258515780|ref|YP_003192002.1| polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257779485|gb|ACV63379.1| Polyprenyl synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 296
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 177/295 (60%), Gaps = 25/295 (8%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH---PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
+NE K + A Q++ AL+ + LP P I+H AMRYS+ GGKRL + IA+ E +GG
Sbjct: 4 LNELKKI-AGQVDAALNRYL-LPESSCPEIIHRAMRYSIFAGGKRLRPAMLIAAAEAVGG 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S M ACA+EL+ T ++I DDLP +D+DD RRGKP+NHKVFGEA AILA AL ++
Sbjct: 62 SADKVMPAACALELIHTYSLIHDDLPSMDDDDYRRGKPTNHKVFGEAMAILAGDALLTMS 121
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
Q +A + +N I++A G+ G+ GQ++DI S +E+ L +IH
Sbjct: 122 FQLLAGLSGRNGIAPADVVRVIADISAAAGTTGLIGGQVVDIVSANQEIDAGTLEYIHTK 181
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGR 237
KTG A+I SG ++ G ++EE++ + N+ ++ G+A+Q+ +DI+DV G + K G
Sbjct: 182 KTGALFRAAIRSGAVLSGADDEELKSLTNYAEHFGLAFQITDDILDVAGDMQKTGKPVGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVS 290
D +KATYP L G++ + + A A+Q L +P +A L LV F+V+
Sbjct: 242 DEKNNKATYPALYGLEEAYRLAGY---SAEQALYALEPFGEKANFLKELVKFVVN 293
>gi|229111653|ref|ZP_04241203.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|423585339|ref|ZP_17561426.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
gi|228671788|gb|EEL27082.1| Geranyltranstransferase [Bacillus cereus Rock1-15]
gi|401233982|gb|EJR40468.1| hypothetical protein IIE_00751 [Bacillus cereus VD045]
Length = 296
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKAILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|188586314|ref|YP_001917859.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351001|gb|ACB85271.1| farnesyl-diphosphate synthase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 297
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 155/258 (60%), Gaps = 18/258 (6%)
Query: 27 INEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
+++ L E +P +P +HEAM YS GGKRL L +A+ ++ G ++ + ACAI
Sbjct: 14 VDQKLQEYLPNKSEYPTAIHEAMHYSVFAGGKRLRPLLTLAAGDLFGANKKTILPFACAI 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN- 142
EL+ T ++I DDLP LDNDDLRRGK +NH VFGE AILA AL A + + +N
Sbjct: 74 ELIHTYSLIHDDLPALDNDDLRRGKSTNHVVFGEDIAILAGDALLNYAFELMTSKGVENF 133
Query: 143 ------------INSAVGSEGIAAGQIMDINSE-GKEVSLSELNFIHRHKTGKFIEASIV 189
+ A G++G+ GQ++DI SE ++ L +++IH+HKTG ASI
Sbjct: 134 TDARTPLWAISEVAKASGTKGMIGGQVVDIKSEKNADIDLETVSYIHKHKTGALFTASIR 193
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
G I+ ++ ++E++ + + +G+A+Q+ +DI+D+ G + KT G+D +KATYPK
Sbjct: 194 IGAILSQASQADLEKLTTYAQKLGLAFQVVDDILDIEGDEQKLGKTVGKDDDNEKATYPK 253
Query: 249 LVGIDGSKKHAKELIAEA 266
++G+ S ++A L EA
Sbjct: 254 IMGLKESHEYASRLHHEA 271
>gi|12862619|dbj|BAB32548.1| putative GGPP synthase [Lactuca indica var. laciniata]
Length = 205
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 134/200 (67%), Gaps = 12/200 (6%)
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKA-KNINSAVGS 149
NDD RRGKP+NH V+GE A+LA AL + +HI I++A + +GS
Sbjct: 1 NDDFRRGKPTNHIVYGEDVAVLAGDALLSFSFEHITTATKGVSSDRILRAIGELAKCIGS 60
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ AGQ++D+ SEG +V L L FIH HKT +E S+V G I+GGG++EEIE++R F
Sbjct: 61 EGLVAGQVVDVCSEGADVGLDHLEFIHLHKTAALLEGSVVLGAIMGGGSDEEIEKLRKFA 120
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+ +Q+ +DI+DV S E KT G+D++ K TYPKL+GI+ S++ A++L EA++
Sbjct: 121 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLVAGKTTYPKLLGIEKSREFAEKLNKEAQE 180
Query: 269 ELAYFDPTRAAPLDHLVNFI 288
+L+ FD +AAPL L N+I
Sbjct: 181 QLSEFDQRKAAPLIALANYI 200
>gi|384915972|ref|ZP_10016175.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
gi|384526670|emb|CCG92046.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum
fumariolicum SolV]
Length = 299
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 152/263 (57%), Gaps = 15/263 (5%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
K ++ Y A + I AL + V P ILHEA+ YSL GGKRL LC+A
Sbjct: 4 KAMEIEAYIAKQQGIIESALRKYVTDKSKKPRILHEAIDYSLFSGGKRLRPILCLAGAHT 63
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+ + A+ MACA+E + T ++I DDLP +DNDD RRGKPS HK++GEA AIL AL
Sbjct: 64 VCMATDCALPMACAVECIHTYSLIHDDLPSMDNDDFRRGKPSLHKIYGEAMAILTGDALL 123
Query: 129 CLAMQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA + ++ + A GS + AGQ+ D+ SEGKE+ L++L +IH
Sbjct: 124 ALAFEIASLCSPLGSSYPLSTMIWELARAAGSRALVAGQVADLESEGKEIGLTQLRYIHC 183
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
KT I ++ G + +E+ + + +G+ +G+A+Q+ +DI+DV + E+ K+ G
Sbjct: 184 RKTAALITVALRLGAMSANADEKTLRLITKYGRSLGLAFQIIDDILDVTQTTEILGKSAG 243
Query: 237 RDMMRDKATYPKLVGIDGSKKHA 259
+D KATYP+++G++ SKK A
Sbjct: 244 KDQKAKKATYPRIMGLEYSKKAA 266
>gi|152976582|ref|YP_001376099.1| polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
gi|152025334|gb|ABS23104.1| Polyprenyl synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 297
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/245 (43%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L +AM YSL GGKRL L A+ G + + + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLRDAMTYSLEAGGKRLRPLLLFATLHAFGKERELGIGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q ++ + I+S
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVVSAYNYEGISSEIKLRLALEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++L+EL +IH+HKTG+ +E ++++G I+ G +EE E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKHLTLNELEYIHKHKTGRLLEFAVLAGAILAGATKEEEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KYVG+A+Q+ +DI+DV G+ E+ + G D +K+TY L ID +K +E
Sbjct: 208 KLLAFAKYVGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFAIDEAKSILEET 267
Query: 263 IAEAK 267
IA+AK
Sbjct: 268 IAKAK 272
>gi|300113747|ref|YP_003760322.1| polyprenyl synthetase [Nitrosococcus watsonii C-113]
gi|299539684|gb|ADJ28001.1| Polyprenyl synthetase [Nitrosococcus watsonii C-113]
Length = 296
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 174/290 (60%), Gaps = 28/290 (9%)
Query: 21 ALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAM 77
AL+A+ + +AL++ +P P LHEAMRY+ L GGKRL L ++ +G +++
Sbjct: 10 ALQAR-VEQALEKTLPPASKPPKRLHEAMRYAVLGGGKRLRPLLTYSAGMAVGVAEAALD 68
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA- 136
+ A A+EL+ +++ DDLP +DNDDLRRG+P+ HK FGE TA+LA AL LA + +A
Sbjct: 69 APASAVELIHAYSLVHDDLPSMDNDDLRRGQPTCHKAFGETTALLAGDALQALAFRILAE 128
Query: 137 ---IIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I A+N + A GS G+A GQ +D++S G +++LSE+ +HR KTG I A
Sbjct: 129 PASTIPAENQINMLKLLAEAAGSRGMAGGQAIDLDSVGIQLTLSEMETMHRLKTGALIRA 188
Query: 187 SIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDV------IGSPEMREKTGRDM 239
S++ G ++ IE++ +F + +G+A+Q+ +D++DV +G P+ G D
Sbjct: 189 SVLLGAWCQPAITQDTIEKLDHFAQCIGLAFQIQDDVLDVESDTATLGKPQ-----GSDK 243
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DK TYP L+G+ +K A+ L+ +A Q L D + L+ L +FIV
Sbjct: 244 AQDKPTYPSLLGLIQAKARAQSLLEDAHQALRAIDAS-TEHLEWLADFIV 292
>gi|403380864|ref|ZP_10922921.1| polyprenyl synthetase [Paenibacillus sp. JC66]
Length = 301
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 19/275 (6%)
Query: 9 TLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCE 67
T+ + Q NE + ++ +Q+ L A +P P L EAM YSL GGKRL L +A+ E
Sbjct: 6 TIKDYIQ-NEARFVE-EQLRHFLPSAWDVPQP--LKEAMAYSLHAGGKRLRPILVLAAAE 61
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
+GG++ A+ +ACA+E++ T ++I DDLP LDNDD RRG P+NHKV GEA AILA AL
Sbjct: 62 SLGGNREAALPIACAVEMVHTYSLIHDDLPALDNDDFRRGMPTNHKVHGEAMAILAGDAL 121
Query: 128 --HCLAMQHIAIIKA-----------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
H + A +++ ++ G+ G+ GQ+ D+ E L EL +
Sbjct: 122 LTHAFYVASDACLRSGIAPEQGLALIRDFAEFAGARGMVGGQVADMVGEQGITRLEELQY 181
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MRE 233
IH HKTG I S+ +G + NEE+++ + FG+ +GMA+Q+ +DI+D+ G + + +
Sbjct: 182 IHTHKTGDLIVFSVKAGGRLANANEEQMKALEKFGRSIGMAFQILDDILDITGDEQKLGK 241
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
D + K TYP +G++ SKK +E KQ
Sbjct: 242 PVKSDEKQQKVTYPYFIGLEESKKLVREHTEAGKQ 276
>gi|229019397|ref|ZP_04176220.1| Geranyltranstransferase [Bacillus cereus AH1273]
gi|229025640|ref|ZP_04182046.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228735638|gb|EEL86227.1| Geranyltranstransferase [Bacillus cereus AH1272]
gi|228741867|gb|EEL92044.1| Geranyltranstransferase [Bacillus cereus AH1273]
Length = 297
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 160/249 (64%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMTYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|423612401|ref|ZP_17588262.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
gi|401245990|gb|EJR52342.1| hypothetical protein IIM_03116 [Bacillus cereus VD107]
Length = 297
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEPKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAK 267
IA+AK
Sbjct: 268 IAKAK 272
>gi|15233848|ref|NP_195558.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
gi|85680919|sp|Q39108.2|GGR_ARATH RecName: Full=Heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic; Flags: Precursor
gi|11908118|gb|AAG41488.1|AF326906_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|12642930|gb|AAK00407.1|AF339725_1 putative geranylgeranyl pyrophosphate synthase-related protein
[Arabidopsis thaliana]
gi|13926334|gb|AAK49631.1|AF372915_1 AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|4467133|emb|CAB37502.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|7270829|emb|CAB80510.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|16323260|gb|AAL15364.1| AT4g38460/F20M13_20 [Arabidopsis thaliana]
gi|21555524|gb|AAM63877.1| geranylgeranyl pyrophosphate synthase-related protein [Arabidopsis
thaliana]
gi|332661530|gb|AEE86930.1| geranylgeranyl diphosphate synthase, type II [Arabidopsis thaliana]
Length = 326
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 20/226 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEA+P+ HPA ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGG 104
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D +RRGKPSNH V+G AILA AL LA
Sbjct: 105 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLA 164
Query: 132 MQHI------------AIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI I++ I VGS G+AAGQ +D+ EG LS F+
Sbjct: 165 FQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FVQEK 219
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K G E S V G ++GG E+E++ +R +G+ VGM YQ+ +DI +
Sbjct: 220 KFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITE 265
>gi|410667961|ref|YP_006920332.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
gi|409105708|gb|AFV11833.1| polyprenyl synthetase [Thermacetogenium phaeum DSM 12270]
Length = 295
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 162/269 (60%), Gaps = 16/269 (5%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
+A IN +L +P +P ++HEAMRYS GGKRL L +A+ M+G + +
Sbjct: 10 RADLINSSLQSLLPPASCYPPVIHEAMRYSSFAGGKRLRGVLTLATAGMLGLEEERVLPA 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK 139
A AIE++ T ++I DDLP +D+DD RRG+P+ H+VFGEA AILA AL LA + ++ +
Sbjct: 70 AAAIEMIHTYSLIHDDLPAMDDDDYRRGRPTCHRVFGEAIAILAGDALLTLAFETLSRLA 129
Query: 140 AKNINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
S+V GS G+ GQ++D+ SEGK++ S L +IHRHKTG A+
Sbjct: 130 EGGFASSVVLQVIQEVASGAGSRGLVGGQVVDLESEGKDIEASVLEYIHRHKTGALFRAA 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATY 246
I SG I+ G ++E+ + + + G+A+Q+ +DI+D+ GS E + +KTGRD+ R K TY
Sbjct: 190 IRSGAILAGAGDKELTALTGYAEAFGLAFQITDDILDLAGSEEKLGKKTGRDLARGKVTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDP 275
P L G+ +++ A + + LA F P
Sbjct: 250 PGLFGMKKAREMAACQVEKCLMSLAVFGP 278
>gi|51246551|ref|YP_066435.1| geranylgeranyl pyrophosphate synthase [Desulfotalea psychrophila
LSv54]
gi|50877588|emb|CAG37428.1| probable geranylgeranyl pyrophosphate synthase [Desulfotalea
psychrophila LSv54]
Length = 298
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 160/297 (53%), Gaps = 20/297 (6%)
Query: 16 VNEYKALKAKQINEALDE-AVPLPHPAILH-EAMRYSL-PGGKRLMSTLCIASCEMIGG- 71
+ Y K + EA+D + P H EAMRYSL GGKR+ LC+A+ + I
Sbjct: 3 IKNYLEQKRSLVEEAMDRFMLEESGPFKKHIEAMRYSLFAGGKRIRPILCLAAADSICAQ 62
Query: 72 --SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
+Q + +ACA+E + T ++I DDLP +D+D LRRGK +NH ++GEA AILA L
Sbjct: 63 ERTQENLLPVACALECIHTYSLIHDDLPAMDDDQLRRGKATNHVLYGEAGAILAGDGLLS 122
Query: 130 LAMQHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A IA N+ + A GS G+ GQ +DI SE KE+ L IHR
Sbjct: 123 WAFDLIADRGKGNLTAEKRLDICHMVARAAGSLGMVGGQQLDIQSENKEIDFDTLATIHR 182
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
KTG I SI+SG I G N +++ + +G +G+A+Q+ +D++D + E KT G
Sbjct: 183 SKTGALITCSIMSGAIGAGANAKQLHALEEYGNNIGLAFQIIDDLLDATATTEELGKTAG 242
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
D KATYP GID +++ AK + A + L FD RA PL L N+I S N
Sbjct: 243 SDAEHGKATYPLFFGIDKTREKAKAAVDNAIKALTLFDH-RADPLRGLANYIYSRTN 298
>gi|15895350|ref|NP_348699.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
ATCC 824]
gi|337737298|ref|YP_004636745.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
gi|384458806|ref|YP_005671226.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|15025068|gb|AAK80039.1|AE007710_9 Predicted geranylgeranyl pyrophosphate synthase [Clostridium
acetobutylicum ATCC 824]
gi|325509495|gb|ADZ21131.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
EA 2018]
gi|336291039|gb|AEI32173.1| geranylgeranyl pyrophosphate synthase [Clostridium acetobutylicum
DSM 1731]
Length = 289
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 147/236 (62%), Gaps = 12/236 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++E+M YSL GGKR+ L +AS + + +A AIE++ T ++I DDLPC+DN
Sbjct: 28 VYESMNYSLNAGGKRVRPLLLLASYAIYNKDYKEVIDIAAAIEMIHTYSLIHDDLPCMDN 87
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRG+P+NHK+FG + A+LA L +C+ A+ I+ A S+G
Sbjct: 88 DDLRRGRPTNHKIFGYSIALLAGDGLLNEAMNIMFKYCIGKGEEALKACLMISKAASSDG 147
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SEGK+++ EL ++H+ KTG+ I+A++VSG I+GG ++E + +G
Sbjct: 148 MIGGQVVDILSEGKKINEDELRYMHKKKTGELIKAAVVSGAILGGAPLHDVELLSQYGDK 207
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTGR-DMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+A+Q+ +DI+D+IG ++ KT + D+ DK TY L GID K +EL E
Sbjct: 208 LGLAFQIEDDILDIIGDTKIMGKTSKSDLENDKCTYVTLYGIDKCKSICRELTDEC 263
>gi|359474991|ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 1 [Vitis vinifera]
Length = 341
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 26/296 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN L+EA+P+ +P ++EAMRYS+ GGKR +C+A CE+ GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D RRG+PSNH V+G AILA AL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI +I+ I +VGS G+AAGQ +D+ E + + ++F+ R
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL-----EGAPNSVDFVQRK 222
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G +GG +++I R+R +G+ VGM YQ+ +D++ + + + +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKA----KTKSEEDEE 278
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNFIVSFG 292
+ +Y + G++ + + A+EL A+AK+EL+ FD PL V+F G
Sbjct: 279 KKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAERG 334
>gi|11692820|gb|AAG40013.1|AF324662_1 AT4g38460 [Arabidopsis thaliana]
Length = 326
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 20/226 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEA+P+ HPA ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 45 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGG 104
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D +RRGKPSNH V+G AILA AL LA
Sbjct: 105 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLA 164
Query: 132 MQHI------------AIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI I++ I VGS G+AAGQ +D+ EG LS F+
Sbjct: 165 FQHIVSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDL--EGGPFPLS---FVQEK 219
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K G E S V G ++GG E+E++ +R +G+ VGM YQ+ +DI +
Sbjct: 220 KFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITE 265
>gi|77165502|ref|YP_344027.1| polyprenyl synthetase [Nitrosococcus oceani ATCC 19707]
gi|254434894|ref|ZP_05048402.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
gi|76883816|gb|ABA58497.1| farnesyl-diphosphate synthase [Nitrosococcus oceani ATCC 19707]
gi|207091227|gb|EDZ68498.1| polyprenyl synthetase superfamily [Nitrosococcus oceani AFC27]
Length = 296
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 172/293 (58%), Gaps = 34/293 (11%)
Query: 21 ALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAM 77
AL+A+ AL++ +P + P LHEAMRY+ L GGKRL L ++ +G S++V
Sbjct: 10 ALQAR-AERALEKTLPPANNPPKRLHEAMRYAVLGGGKRLRPLLTYSAGIALGVSEAVLD 68
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA- 136
+ A A+EL+ +++ DDLP +DND LRRG P+ HK FGE TA+LA AL LA + +A
Sbjct: 69 APASAVELIHAYSLVHDDLPSMDNDSLRRGHPTCHKAFGETTALLAGDALQALAFRTLAE 128
Query: 137 ---IIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
I AKN + A GS G+A GQ +D++S G +++LSE+ +HR KTG I A
Sbjct: 129 PTSAIPAKNQINMLELLAEAAGSRGMAGGQAIDLDSVGVQLTLSEMETMHRLKTGALIRA 188
Query: 187 SIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDV------IGSPEMREKTGRDM 239
S++ G ++ +E + F + +G+A+Q+ +D++DV +G P+ G D
Sbjct: 189 SVLLGAWCHPEITQDTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQ-----GSDK 243
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDH---LVNFIV 289
+DK TYP L+G+ +K A+ L+ +A+Q L D AP +H L +FIV
Sbjct: 244 AQDKPTYPSLLGLTQAKARAQSLLEDARQTLRAID----APTEHLEWLADFIV 292
>gi|373856764|ref|ZP_09599508.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
gi|372453743|gb|EHP27210.1| Polyprenyl synthetase [Bacillus sp. 1NLA3E]
Length = 297
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 163/279 (58%), Gaps = 19/279 (6%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIAS 65
N +L F + E+K L Q+ EAL + L P IL E+M YSL GGKR+ L A+
Sbjct: 3 NQSLASFSK--EHKNLLESQM-EALIK--KLHAPDILKESMLYSLKAGGKRIRPLLLFAT 57
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
+ G + A AIE++ T ++I DDLP +DNDDLRRGKP+NHKVFG+A AILA
Sbjct: 58 LQAFGMDPRKGLYPAVAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGDAVAILAGD 117
Query: 126 ALHCLAMQHIAIIKAKN------------INSAVGSEGIAAGQIMDINSEGKEVSLSELN 173
L + Q ++ + ++ + A G+EG+ GQ+ DI EGK ++L+EL
Sbjct: 118 GLLTYSFQVLSEMPEQDSDVRTKVGLISLLAQAAGAEGMVGGQVADIEGEGKHLNLTELE 177
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMRE 233
+IH HKTGK + ++SG ++ ++E+ + F K++GMA+Q+ +DI+D+ G+ E+
Sbjct: 178 YIHLHKTGKLLVCCVMSGALMANASKEQASNLEAFAKHLGMAFQIRDDILDLEGNEELIG 237
Query: 234 K-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
K G D K TYP L+ +DG+KK ++ +K L
Sbjct: 238 KPIGSDEENLKNTYPSLLTMDGAKKAMQQHFEASKYHLG 276
>gi|91787628|ref|YP_548580.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
gi|91696853|gb|ABE43682.1| farnesyl-diphosphate synthase [Polaromonas sp. JS666]
Length = 306
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 162/280 (57%), Gaps = 18/280 (6%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPH----PAILHEAMRYS-LPGGKRLMSTLC 62
+ LP F ++ + A + + I +AL V P PA L +AMRY+ L GGKRL L
Sbjct: 5 EKLP-LFTLSAWSAQQLETIEQALSRWVACPTDAPAPAGLGDAMRYAVLDGGKRLRPLLV 63
Query: 63 IASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAIL 122
+A+CE + G+ A+ ACA+EL+ +++ DD+PC+DND LRRGKP+ H FGEA A+L
Sbjct: 64 MAACEAVNGNAEAALRSACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALL 123
Query: 123 ACQALHCLAMQHI--------AIIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSE 171
A AL LA + + A +A + + A G +G+A GQ +D+ S G ++ +
Sbjct: 124 AGDALQALAFEFLTPDDGSVDAATQARLCRMLAQAAGFQGMAGGQAIDLASVGLPLTSGQ 183
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
L+ +HR KTG ++AS++ G G +R +G VG+A+Q+ +DI+DV
Sbjct: 184 LHEMHRLKTGALLQASVMMGTACGAAPPAAQHALREYGAAVGLAFQVVDDILDVTADSAT 243
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
KT G+D +DK T+ L+G+ SK +A++L+ +A L
Sbjct: 244 LGKTAGKDAAQDKPTFVSLMGLQASKDYAQQLLGKALASL 283
>gi|423417897|ref|ZP_17394986.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
gi|401107068|gb|EJQ15025.1| hypothetical protein IE3_01369 [Bacillus cereus BAG3X2-1]
Length = 297
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 160/249 (64%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|359474993|ref|XP_003631564.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
chloroplastic-like isoform 2 [Vitis vinifera]
Length = 341
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 26/296 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN L+EA+P+ +P ++EAMRYS+ GGKR +C+A CE+ GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D RRG+PSNH V+G AILA AL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI +I+ I +VGS G+AAGQ +D+ E + + ++F+ R
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL-----EGAPNSVDFVQRK 222
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G +GG +++I R+R +G+ VGM YQ+ +D++ + + + +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDVLKA----KTKSEEDEE 278
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNFIVSFG 292
+ +Y + G++ + + A+EL A+AK+EL+ FD PL V+F G
Sbjct: 279 KKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAERG 334
>gi|423389504|ref|ZP_17366730.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
gi|401641595|gb|EJS59312.1| hypothetical protein ICG_01352 [Bacillus cereus BAG1X1-3]
Length = 297
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 160/249 (64%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|403384095|ref|ZP_10926152.1| geranyltranstransferase [Kurthia sp. JC30]
Length = 293
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 158/268 (58%), Gaps = 25/268 (9%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PAIL EAM YSL GGKR+ +A E +G + ++ A+E++ T ++I DDLP
Sbjct: 29 PAILKEAMAYSLKAGGKRVRPLFVLAVLEHLGADKKAGYTIGSAVEMIHTYSLIHDDLPS 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCL------------AMQHIAIIKAKNINSA 146
+DNDD RRGK +NHKV+GEA A LA AL+ L A Q + +I ++ A
Sbjct: 89 MDNDDYRRGKLTNHKVYGEAYATLAGDALNTLPFGVIARMDGISAEQKVTLIDL--LSEA 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQI+DI+ E ++++L EL +H +KTG + SI +G ++ ++ R
Sbjct: 147 AGAEGMVGGQILDIDGETRQLTLEELEHVHVNKTGAILRFSIEAGAVLADADQATRNIFR 206
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK----HAKE 261
+ ++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ +DG+K+ H +
Sbjct: 207 EYAYHIGLAFQIKDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLDGAKEKLATHYEA 266
Query: 262 LIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+A +Q P+ + L+ L +IV
Sbjct: 267 ALAALRQL-----PSDSTLLEELATYIV 289
>gi|292670718|ref|ZP_06604144.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
gi|292647664|gb|EFF65636.1| geranyltranstransferase [Selenomonas noxia ATCC 43541]
Length = 291
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 159/260 (61%), Gaps = 13/260 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAM YSL GGKRL L +A+ + +G + + ACA+E++ T ++I DDLP +DN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGSDGTKLLPAACALEMIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ---------HIAIIKAKN-INSAVGSEG 151
DD RRGK +NHKV+G+ AILA AL LA +++++ + I+ A G+EG
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAFTVLLRQKDVPAVSLLRVVDEISRAAGAEG 149
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++D+ +E K +SL EL +H KTG A++ SG I+GG +E+++ + + +
Sbjct: 150 MVGGQVLDLQAENKTISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLTALTAYADH 209
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+ +DI+DV+G+ E + + G D K+TY L + +++ A+ + EA L
Sbjct: 210 FGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELARRTVDEALAAL 269
Query: 271 AYFDPTRAAPLDHLVNFIVS 290
A F + A+ L LV+++V+
Sbjct: 270 AVF-GSEASFLRELVSYLVN 288
>gi|56477949|ref|YP_159538.1| polyprenyl synthetase [Aromatoleum aromaticum EbN1]
gi|56313992|emb|CAI08637.1| Polyprenyl synthetase (EC 2.5.1.10),gene: ISPA OR NE1160
[Aromatoleum aromaticum EbN1]
Length = 298
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 157/264 (59%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA LHEAMRY+ L GGKR+ L A+ ++G + +ACA+EL+ +++ DDLPC
Sbjct: 32 PARLHEAMRYAVLGGGKRIRPLLVHAAGGLVGAAPERLDKVACAVELIHAYSLVHDDLPC 91
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAV 147
+DND LRRGKP+ H + +ATA+L +L LA Q ++ + + A
Sbjct: 92 MDNDVLRRGKPTVHVEYDDATALLVGDSLQALAFQSLSEHPLTEDPSEQLSMITQLARAS 151
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ +D+ + GK++S EL ++H HKTG I AS++ G G + + +ER+
Sbjct: 152 GSRGMAGGQAIDLAAVGKQLSREELEYMHIHKTGALIRASVLLGAACGARLDSDRLERLD 211
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
++GK VG+ +Q+ +DI+D KT G+D +K TY L+G+ ++ A+ L+A+
Sbjct: 212 HYGKLVGLLFQVVDDILDTQSDTATLGKTAGKDADNNKPTYVTLLGMTEARALAESLLAD 271
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A++ L F P +AA LD L FIV
Sbjct: 272 AREALTPFGP-QAARLDELATFIV 294
>gi|147776976|emb|CAN70079.1| hypothetical protein VITISV_001037 [Vitis vinifera]
Length = 341
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 26/296 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN L+EA+P+ +P ++EAMRYS+ GGKR +C+A CE+ GG
Sbjct: 48 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D RRG+PSNH V+G AILA AL L
Sbjct: 108 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 167
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI +I+ I +VGS G+AAGQ +D+ E + + ++F+ R
Sbjct: 168 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDL-----EGAPNSVDFVQRK 222
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G +GG +++I R+R +G+ VGM YQ+ +D++ + + + +
Sbjct: 223 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQVVDDMLKA----KTKSEEDEE 278
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNFIVSFG 292
+ +Y + G++ + + A+EL A+AK+EL+ FD PL V+F G
Sbjct: 279 KKKKGKSYVDVYGMEKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAERG 334
>gi|42783297|ref|NP_980544.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206976353|ref|ZP_03237261.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217961668|ref|YP_002340238.1| geranyltranstransferase [Bacillus cereus AH187]
gi|229140912|ref|ZP_04269456.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|375286185|ref|YP_005106624.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|402555688|ref|YP_006596959.1| geranyltranstransferase [Bacillus cereus FRI-35]
gi|423354675|ref|ZP_17332300.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|423374004|ref|ZP_17351343.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|423566860|ref|ZP_17543107.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|42739225|gb|AAS43152.1| geranyltranstransferase [Bacillus cereus ATCC 10987]
gi|206745549|gb|EDZ56948.1| geranyltranstransferase [Bacillus cereus H3081.97]
gi|217065600|gb|ACJ79850.1| geranyltranstransferase [Bacillus cereus AH187]
gi|228642488|gb|EEK98775.1| Geranyltranstransferase [Bacillus cereus BDRD-ST26]
gi|358354712|dbj|BAL19884.1| geranyltranstransferase [Bacillus cereus NC7401]
gi|401086223|gb|EJP94450.1| hypothetical protein IAU_02749 [Bacillus cereus IS075]
gi|401094819|gb|EJQ02889.1| hypothetical protein IC5_03059 [Bacillus cereus AND1407]
gi|401215375|gb|EJR22092.1| hypothetical protein II7_00083 [Bacillus cereus MSX-A12]
gi|401796898|gb|AFQ10757.1| geranyltranstransferase [Bacillus cereus FRI-35]
Length = 296
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|334137118|ref|ZP_08510563.1| geranyltranstransferase [Paenibacillus sp. HGF7]
gi|333605316|gb|EGL16685.1| geranyltranstransferase [Paenibacillus sp. HGF7]
Length = 300
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 159/272 (58%), Gaps = 16/272 (5%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY A AK++ L E P P +L ++ +YS+ GGKRL L +A+ E +GG
Sbjct: 7 IQEYIASYAKEVEGELRELFPRLWDIPDVLRQSAQYSIDAGGKRLRPILVLAAAEALGGR 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA-----CQAL 127
+ AM +ACAIE++ T ++I DDLP +DNDD RRGK +NHKV+GEA AILA QA
Sbjct: 67 KEAAMPVACAIEMVHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTQAF 126
Query: 128 HCLAMQHIAIIKAKNINSAV-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + A+ + + V G+ G+ GQ+ D+ E LS L +IH+HKT
Sbjct: 127 YSASQARRHGVPAEQVLNIVEELAEYSGARGMVGGQVADMKGEQGITELSGLEYIHQHKT 186
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
I S+ +G I G +++++E + FG+ +G+A+Q+ +DI+DV G+ E + + G D
Sbjct: 187 SDLIIFSLRAGGRIAGADDKQLEALTAFGRSIGLAFQIQDDILDVTGTQEKLGKAVGSDE 246
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
+ K TYP +G++ S++ L EAK +A
Sbjct: 247 KQQKVTYPFFIGMEESERRVALLTDEAKTAIA 278
>gi|205374084|ref|ZP_03226884.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
coahuilensis m4-4]
Length = 294
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 179/287 (62%), Gaps = 16/287 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQS 74
+ EYKA+ K++ E +D L P L E+M YS+ GGKR+ L +A+ E G S +
Sbjct: 9 MTEYKAIIDKELVEQID---YLSIPTSLKESMIYSVSAGGKRIRPVLLLATIEAFGKSPA 65
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
+ + A A+E++ T ++I DDLP +D+DDLRRGKP+NHKVFGEATAILA AL + +
Sbjct: 66 LGIKAAVALEMVHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEATAILAGDALLTYSFEV 125
Query: 135 IAIIK----------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
IA +K + A G EG+ GQ+ D+ E K ++L EL +IHR+KTGK +
Sbjct: 126 IASMKDILPQTKIELVRLFAKAAGPEGMVGGQVADMEGERKTLTLEELEYIHRNKTGKLL 185
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDK 243
+ ++V+G IIGG ++EE+ + + +++G+A+Q+ +DI+D+ G+ + + ++ G D+ DK
Sbjct: 186 QYAVVAGAIIGGASKEEVRLYKEYAEHIGLAFQIKDDILDIEGTEDKIGKRVGSDVNNDK 245
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+TYP L+ ++G+K+ + EA + + + L+ L+ IVS
Sbjct: 246 STYPSLLTLEGAKEKLEYHRNEA-HSILHKTSQKTVLLNDLIEMIVS 291
>gi|114320106|ref|YP_741789.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
gi|114226500|gb|ABI56299.1| farnesyl-diphosphate synthase [Alkalilimnicola ehrlichii MLHE-1]
Length = 306
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 160/268 (59%), Gaps = 17/268 (6%)
Query: 26 QINEALDEAVP--LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++ +ALD +P HPA LH+AMRYS L GGKRL L A+ + +G + ++ ACA
Sbjct: 23 RVEQALDYWLPEAQTHPARLHQAMRYSALSGGKRLRPILVFATGQALGAAPTLLDGPACA 82
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN 142
+E + ++I DDLP +D+D+LRRG+P+ HK F EATAILA AL LA +A
Sbjct: 83 VECIHAYSLIHDDLPAMDDDELRRGQPTCHKAFDEATAILAGDALQTLAFHILAHDPGGV 142
Query: 143 INS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
NS A GS G+A GQ +D+ + G+++ +++L +H HKTG I AS+
Sbjct: 143 QNSRARLRMVEVLALAAGSRGMAGGQAIDLAATGQQLDVAQLEDMHIHKTGALIRASVQL 202
Query: 191 GVIIGGGNEEE-IERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
G + +EE ++R+ ++GK +G+A+Q+ +DI+DV G E K G D + KATYP
Sbjct: 203 GALAASPVDEELLQRLDHYGKCIGLAFQIRDDILDVEGETEALGKARGSDQRQAKATYPA 262
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPT 276
L+G+ +++ A L+ +A + L D +
Sbjct: 263 LLGMREARETADRLVEDALESLEGLDQS 290
>gi|5631297|dbj|BAA82614.1| farnesyl diphosphate synthase (SelFPS) [Synechococcus elongatus]
Length = 300
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 163/280 (58%), Gaps = 17/280 (6%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
+ EAL+ +P P LH+AMRY+ L GGKR+ LC A+ E+ G + A A+
Sbjct: 19 VEEALNRLLPPAEVAPQRLHQAMRYAVLGGGKRVRPLLCYAAGEVSGAELERLSTAAAAL 78
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA--- 140
EL+ +++ DDLPC+D+D LRRGKP+ H + EATA+LA +L LA Q +A +
Sbjct: 79 ELIHVYSLVHDDLPCMDDDVLRRGKPTCHVEYDEATALLAGDSLQSLAFQLLAEYRVADS 138
Query: 141 --------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+++ A GS G+A GQ +D+ + GK ++L EL F+H HKTG I AS++ G
Sbjct: 139 PQTQLRMLEHLARAAGSRGMAGGQAIDLEATGKTLTLPELEFMHIHKTGALIRASVILGA 198
Query: 193 IIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
G ++++R+ +F K +G+A+Q+ +D++D + KT G+D + K TY V
Sbjct: 199 NCGRALASKDMDRLDHFAKRIGLAFQVVDDVLDAQSTTATLGKTAGKDARQGKPTYVSTV 258
Query: 251 GIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
G++ ++ A+EL EA + LA F RA L L +IVS
Sbjct: 259 GVEAARAMAQELKREAVESLAPFG-ERARRLRELAEYIVS 297
>gi|328956986|ref|YP_004374372.1| geranyltranstransferase [Carnobacterium sp. 17-4]
gi|328673310|gb|AEB29356.1| geranyltranstransferase [Carnobacterium sp. 17-4]
Length = 299
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 156/264 (59%), Gaps = 16/264 (6%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCL 99
A LHEAM YSL GGKR+ L +A+ + +GG +++ A+E + T ++I DDLP +
Sbjct: 30 APLHEAMFYSLEAGGKRIRPLLLLATIQSLGGDIRKGYAVSAALEFIHTYSLIHDDLPAM 89
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK---------NINSAVGSE 150
DNDDLRRGKP++H V+GE TAILA AL A + IA+ A + + G E
Sbjct: 90 DNDDLRRGKPTSHIVYGEDTAILAGDALLTQAFEIIAVSDASPEKKVKLILALAKSAGPE 149
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ+ DI E K++SL EL FIHR+KTG+ ++ I + +I E E++ + +
Sbjct: 150 GMILGQMADIQGETKDLSLEELQFIHRNKTGELLKFPIYAACVIADAATEVEEQLMGYAE 209
Query: 211 YVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
++G+AYQ+ +DI+DVIG+ E+ + G D +K+TYP L+ ++G+KK + + AK
Sbjct: 210 HIGLAYQIRDDILDVIGNVEEIGKNIGMDAAHNKSTYPGLLTLEGAKKALNQELTAAKLN 269
Query: 270 LAYF-----DPTRAAPLDHLVNFI 288
L D R ++ LV I
Sbjct: 270 LMTVEQISRDSARPVQINLLVEII 293
>gi|229198305|ref|ZP_04325012.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|423574135|ref|ZP_17550254.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|423604168|ref|ZP_17580061.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
gi|228585184|gb|EEK43295.1| Geranyltranstransferase [Bacillus cereus m1293]
gi|401212704|gb|EJR19447.1| hypothetical protein II9_01356 [Bacillus cereus MSX-D12]
gi|401245854|gb|EJR52207.1| hypothetical protein IIK_00749 [Bacillus cereus VD102]
Length = 296
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|345861767|ref|ZP_08814019.1| geranyltranstransferase [Desulfosporosinus sp. OT]
gi|344325160|gb|EGW36686.1| geranyltranstransferase [Desulfosporosinus sp. OT]
Length = 277
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 157/263 (59%), Gaps = 29/263 (11%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
IL ++M YSL GGKR+ L +AS E +GGS + + A A+EL+ T ++I DDLP +D
Sbjct: 15 ILDQSMYYSLIGGGKRIRPVLALASAEAVGGSSELILPAAVALELIHTYSLIHDDLPAMD 74
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKAKNINSAVG 148
NDD RRG+ SNHKVFGEA AILA AL A + +A II + + A G
Sbjct: 75 NDDYRRGRLSNHKVFGEAQAILAGDALLTYAFEFLADEGLGQSERQLRII--REVAVAAG 132
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ+ D+ EGK ++L+E+ IH+ KTG + S G I+ GG EE+++ + ++
Sbjct: 133 KVGMVGGQVADVAGEGKTLTLNEIEEIHKAKTGALLTVSARLGGILAGGTEEQVKALTDY 192
Query: 209 GKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK--HAKELIAE 265
+ +G+A+Q+ +DI+DV+G S + + G D+ + KATY L+G++G++ HA+ L A+
Sbjct: 193 AQALGLAFQIKDDILDVVGDSATLGKPAGSDLRQGKATYVSLLGLEGAEHQLHAQILKAQ 252
Query: 266 AK-----------QELAYFDPTR 277
+ ELAY+ R
Sbjct: 253 SAVKPFAEGAFFLSELAYYIEQR 275
>gi|114331488|ref|YP_747710.1| polyprenyl synthetase [Nitrosomonas eutropha C91]
gi|114308502|gb|ABI59745.1| farnesyl-diphosphate synthase [Nitrosomonas eutropha C91]
Length = 297
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 158/264 (59%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA LHEAMRY+ L GGKR+ L A+ E+ G ++ ++ + A+EL+ +++ DDLPC
Sbjct: 31 PARLHEAMRYAVLNGGKRVRPLLSFAAGELSGADKTQVIAASAAVELIHAYSLVHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAV 147
+DND LRRGKP+ H +GE TA+L +L LA Q +A + +++ A
Sbjct: 91 MDNDILRRGKPTCHIRYGEPTALLVGDSLQSLAFQLLAESALTEDPRTQLEMIRHLAFAA 150
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ +D++S GK +SL EL F+H HKTG I A+++ G G NE++ +++
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGSRLNEDQFKQLD 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+F K +G+A+Q+ +DI+D S KT G+D +K TY ++GI +++ A EL E
Sbjct: 211 HFAKCIGLAFQVVDDILDAEASTAALGKTAGKDAENNKPTYVSILGIKQARELAHELQRE 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A L F P A L + +FIV
Sbjct: 271 ASGVLDKFGP-EALRLQQITDFIV 293
>gi|47569437|ref|ZP_00240118.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228987369|ref|ZP_04147489.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157777|ref|ZP_04285852.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|47553852|gb|EAL12222.1| geranyltranstransferase [Bacillus cereus G9241]
gi|228625734|gb|EEK82486.1| Geranyltranstransferase [Bacillus cereus ATCC 4342]
gi|228772341|gb|EEM20787.1| Geranyltranstransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 296
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|423452515|ref|ZP_17429368.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|423470398|ref|ZP_17447142.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
gi|401140153|gb|EJQ47710.1| hypothetical protein IEE_01259 [Bacillus cereus BAG5X1-1]
gi|402436527|gb|EJV68557.1| hypothetical protein IEM_01704 [Bacillus cereus BAG6O-2]
Length = 297
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEET 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|452994013|emb|CCQ94485.1| geranyltranstransferase [Clostridium ultunense Esp]
Length = 296
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 160/290 (55%), Gaps = 17/290 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
+ EY +A E L +P P L ++M YSL GGKR L + E IG S+
Sbjct: 4 LQEYLEEQASWFTEQLPRFLPRDIPERLLQSMDYSLRAGGKRFRPILLFSVLESIGKSRE 63
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
+ + A AIE++ T ++I DDLP +DNDD RRGK +NHKVFGE AILA AL A
Sbjct: 64 LGLETAVAIEMIHTYSLIHDDLPGMDNDDYRRGKLTNHKVFGEGMAILAGDALLTWAFYL 123
Query: 135 IAIIK--------------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
++++ + + A G G+ GQ +D+ +E K++ LSEL IH HKT
Sbjct: 124 LSVLPDFHPELSHATSLLLIRKLAEAAGPTGMVGGQALDLEAENKQLPLSELEKIHTHKT 183
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G I S ++G I+GG ++ E + + +G+A+Q+ +DI+++IG + + ++ G D
Sbjct: 184 GDMIHFSAMAGAILGGATTKQKEAFSTYARKLGLAFQIQDDILNIIGDEQKLGKRVGSDA 243
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K+TYP L+G++ S + L+ EAK+ + D + L L ++IV
Sbjct: 244 QLGKSTYPALLGMEESIAYMNRLVDEAKKAIQ-IDGIKREHLHLLADYIV 292
>gi|210622494|ref|ZP_03293199.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
gi|210154207|gb|EEA85213.1| hypothetical protein CLOHIR_01147 [Clostridium hiranonis DSM 13275]
Length = 295
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 169/286 (59%), Gaps = 19/286 (6%)
Query: 22 LKAKQINEALDEAVP--LPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMS 78
++A E + + +P + + + EAM YSL GGKRL L + +C ++GG A+
Sbjct: 9 IRANYAEEIIKKYMPEEVGYQKTIMEAMNYSLSSGGKRLRPVLTLEACRIVGGDTDNAIP 68
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--- 135
A AIE++ T ++I DDLP LDNDDLRRG+ +NHKVFGEA AILA AL A + +
Sbjct: 69 FAAAIEMIHTYSLIHDDLPALDNDDLRRGRATNHKVFGEAMAILAGDALLNFAYETMLKE 128
Query: 136 ---------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
+ I G G+ GQ++D+ SE ++ +L++IH +KT +
Sbjct: 129 SIGKENPERYLRATYEIAKGAGIYGMVGGQVVDVQSENMQIPKEKLDYIHENKTAAMMVG 188
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKAT 245
+ +G IGG +E+++E + ++ +G+A+Q+ +DI+D++G ++ + G D+ +K+T
Sbjct: 189 CMRAGAAIGGADEKQMELITDYANKIGLAFQIVDDILDIVGDEAKLGKHVGSDIENNKST 248
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYF-DPTRAAPLDHLVNFIVS 290
YP L+G++ S++ A ELI +AK+ ++ D T LD L ++I+S
Sbjct: 249 YPSLMGLEKSREIATELIEDAKRSISKVTDDT--GFLDGLADYILS 292
>gi|118443490|ref|YP_878055.1| geranyltranstransferase [Clostridium novyi NT]
gi|118133946|gb|ABK60990.1| geranyltranstransferase [Clostridium novyi NT]
Length = 289
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 154/239 (64%), Gaps = 12/239 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ I+++AM+YS+ GGKR+ TL + + + + M MACAIE++ T ++I DDLP
Sbjct: 24 YNKIVYDAMKYSVEVGGKRIRPTLMLCTYNVYKDNYKDIMPMACAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
+DNDDLRRGKP+NHKVFGEA AILA L AM + A+ +K I+ A
Sbjct: 84 AMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLNNDIRALKASKIISEAS 143
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G EG+ GQ++DI SEGK++++ L ++H++KTGK I++ I++G I+G +E+I+ +
Sbjct: 144 GVEGMIGGQVVDIISEGKKITIDNLKYMHKNKTGKLIKSPIIAGAILGNAPKEDIDILEE 203
Query: 208 FGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
FG+ +G+A+Q+ +DI+DVIG + + ++ +D +K T+ G++ KK +L E
Sbjct: 204 FGEKLGLAFQIKDDILDVIGDVKVLGKEIHKDKENNKTTFISEFGLESCKKMCIDLTKE 262
>gi|222097624|ref|YP_002531681.1| geranyltranstransferase [Bacillus cereus Q1]
gi|221241682|gb|ACM14392.1| geranyltranstransferase [Bacillus cereus Q1]
Length = 296
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMVHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|146297123|ref|YP_001180894.1| polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145410699|gb|ABP67703.1| Polyprenyl synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 298
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 168/293 (57%), Gaps = 19/293 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
++ EY ++I++ LD + P +++EAMRYS GGKRL LC+ S E++ G +
Sbjct: 5 RLTEYLKYAQEKIDKHLDSLLGKNSPDVIYEAMRYSVFAGGKRLRPILCLLSYELLSGKE 64
Query: 74 S--VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH--- 128
+ + +ACAIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL
Sbjct: 65 ADEKVLDIACAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNKA 124
Query: 129 ---CL------AMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHRH 178
C + I A+ + A G+EG+ GQ++D+ + GKE++ L + +H
Sbjct: 125 AEVCFNWILRNKAKENFIKAAEYLFKASGTEGMIGGQVIDVVNSGKEITEENLLYEMHLK 184
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
KT K I+AS V G + G EE I +GK +G+A+Q+ +DI+D IG S ++ + G+
Sbjct: 185 KTSKLIQASCVCGAYVAGAKEEVISDFEEYGKNLGLAFQIRDDILDFIGDSKKVGKSIGK 244
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
D+ K T+ GI+ ++ + + +A + + +D R L N++++
Sbjct: 245 DIKEKKNTFVTFYGIEKAQNYVESFSKKAIEIVEKYD--RMGLFIELTNYLIT 295
>gi|30022260|ref|NP_833891.1| dimethylallyltransferase [Bacillus cereus ATCC 14579]
gi|29897817|gb|AAP11092.1| Dimethylallyltransferase [Bacillus cereus ATCC 14579]
Length = 296
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HK GK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKAGKLLEFAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDLSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IAEAK
Sbjct: 267 IAEAK 271
>gi|251773174|gb|EES53727.1| Geranyltranstransferase [Leptospirillum ferrodiazotrophum]
Length = 297
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 174/298 (58%), Gaps = 19/298 (6%)
Query: 14 FQVNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
++ Y ++ K++++AL+ E L E +RYSL GGKR+ L +A+ E +
Sbjct: 1 MEITAYLDMQKKRVDKALEALFERELSREYGRLAEGIRYSLLAGGKRIRPVLALAAIEAV 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
GG + + +EL+ T +++ DDLP +DNDDLRRG+P+NH V+GEA AILA AL
Sbjct: 61 GGDGESLLPLTLPLELVHTYSLVHDDLPAMDNDDLRRGRPTNHVVYGEAAAILAGDALLT 120
Query: 130 LAMQHIA------IIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIH 176
A ++ ++ A ++SA G G+ GQ +DI SEGK ++L EL +H
Sbjct: 121 HAFTLLSDPVYDKVLPASRRMEVVHELSSASGLCGMVGGQFLDIVSEGKNLTLPELENLH 180
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTG 236
RHKTG + AS+ G I+ G + E +E + +G+ VG+A+Q+ +D++DV+G+ E K
Sbjct: 181 RHKTGALLRASVRIGGILAGASSEWVEALTRYGEAVGIAFQIADDLLDVLGTAEELGKAA 240
Query: 237 -RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+D + K TYP LVGID ++ A+E EA + +A F ++ PL + ++I+ N
Sbjct: 241 QKDAGKSKNTYPGLVGIDRARILAEEKCREAHEAVAVFG-SKGEPLARIASYIIERRN 297
>gi|363814567|ref|NP_001242759.1| uncharacterized protein LOC100788186 [Glycine max]
gi|255635048|gb|ACU17882.1| unknown [Glycine max]
Length = 342
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 163/293 (55%), Gaps = 30/293 (10%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y A QIN+ LDEA+P+ P ++EAMRYS+ G KR +CI++CE+ GG
Sbjct: 48 FDLKTYCANLMVQINQKLDEAIPVQFPPQIYEAMRYSVLAKGAKRAPPVMCISACELFGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S+ A ACA+E++ ++I DDLPC+D+ RRG+PSNH ++G AILA AL L
Sbjct: 108 SRLAAFPTACALEMVHAASLIHDDLPCMDDSPSRRGQPSNHTIYGVDMAILAGDALFPLG 167
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI + I +VGS G+AAGQ +D+ E + + FI
Sbjct: 168 FRHIVSQTPSDLVPESHLLRVIAEIARSVGSTGMAAGQFLDL-----EGGPNAVGFIQEK 222
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E+S V G + G ++EIER+R +G+ VG+ Y + +DI+ E R K D
Sbjct: 223 KFGEMGESSAVCGGFLAGAEDDEIERLRRYGRAVGVLYAVVDDII------EERLKVEGD 276
Query: 239 MMRDK--ATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNF 287
R +Y ++ G++ + + A+EL A+AK+EL F+ R PL V++
Sbjct: 277 GNRKNKGKSYAEVYGVEKAIEKAEELRAKAKEELDGFEKHGERVLPLYSFVDY 329
>gi|255577858|ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
Length = 345
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 162/287 (56%), Gaps = 27/287 (9%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMS 59
++SQ T F + Y +IN+ LD+A+P+ P ++EAMRYS G KR
Sbjct: 43 VSSQSKSTQ---FDLKTYWTTLIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPP 99
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
+C+A+CE+ GG++ A ACA+E++ T ++I DDLPC+D+D RRG+PSNH ++G
Sbjct: 100 VMCVAACELFGGNRLAAFPTACALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDM 159
Query: 120 AILACQALHCLAMQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKE 166
AILA AL L +HI +++ I AVGS G+AAGQ +D+ E
Sbjct: 160 AILAGDALFPLGYRHIVSHTPTGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDL-----E 214
Query: 167 VSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI 226
S + F K G+ E S V G ++ G ++EI+R+R +G+ VG+ YQ+ +D+++
Sbjct: 215 GGPSFVEFAQEKKYGEMSECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEA- 273
Query: 227 GSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
+ K + R+ +Y L GI+ + + A+EL +AK+EL F
Sbjct: 274 ---KAMNKENEEKRRNGKSYVSLYGIEKAMEVAEELRTQAKKELDGF 317
>gi|116620237|ref|YP_822393.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223399|gb|ABJ82108.1| farnesyl-diphosphate synthase [Candidatus Solibacter usitatus
Ellin6076]
Length = 298
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 162/289 (56%), Gaps = 17/289 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH---PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
+ +Y A + + ++ LD VP P P +H AMRYSL GGKR+ LCI + +
Sbjct: 8 LRDYLAQQQRLVDSELDRLVP-PESAAPETIHRAMRYSLFAGGKRIRPILCIEAARTVSD 66
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ + AC++EL+ T ++I DDLP LDNDD RRGK +NHKVFG+A AILA +L LA
Sbjct: 67 DCAGVAAAACSLELIHTYSLIHDDLPALDNDDYRRGKLTNHKVFGDAMAILAGDSLLTLA 126
Query: 132 MQHIAIIKAKN---------INSAVGS-EGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q +A + A + + +A G+ G+ GQ+ D+ EGK L IHR KTG
Sbjct: 127 FQVLAQLDAPDARKTRLIAELATASGTVGGMIGGQVADLEGEGKPPDAQLLETIHRAKTG 186
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ AS+ G I G E + E + +G++VG+A+Q+ +DI+DV S E KT G+D
Sbjct: 187 ALLRASLRLGAIFAGAAEPQYEALSCYGQHVGLAFQIVDDILDVEESSEALGKTAGKDAA 246
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ K T+P + G++ S++ A A LA F RA L L + IV
Sbjct: 247 QHKITFPAVYGLEPSREMAARECERAHAVLAPFG-ERALRLHELADLIV 294
>gi|423457638|ref|ZP_17434435.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
gi|401148022|gb|EJQ55515.1| hypothetical protein IEI_00778 [Bacillus cereus BAG5X2-1]
Length = 296
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGIGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|423521962|ref|ZP_17498435.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
gi|401176624|gb|EJQ83819.1| hypothetical protein IGC_01345 [Bacillus cereus HuA4-10]
Length = 297
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|168186200|ref|ZP_02620835.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
gi|169295787|gb|EDS77920.1| geranyltranstransferase [Clostridium botulinum C str. Eklund]
Length = 289
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 161/263 (61%), Gaps = 13/263 (4%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ ++++AM+YS+ GGKR+ L + + + + M MACAIE++ T ++I DDLP
Sbjct: 24 YNKMVYDAMKYSVEVGGKRIRPILMLCTYSVYKDNYKEIMPMACAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
+DNDDLRRGKP+NHKVFGEA AILA L AM + A+ +K I+ A
Sbjct: 84 AMDNDDLRRGKPTNHKVFGEAMAILAGDGLLNEAMNIMFNYSLNNDIKALKASKIISEAA 143
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G EG+ GQ++DI SEGK++S+ L ++H++KTGK I++SI++G I+G E++ +
Sbjct: 144 GVEGMIGGQVVDIISEGKKISIDNLRYMHKNKTGKLIKSSIIAGAILGDAPNEDVNILDE 203
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
FG+ +G+A+Q+ +DI+DVIG ++ K +D +K T+ G++G K+ L E
Sbjct: 204 FGEKLGLAFQIKDDILDVIGDEKILGKEVHKDKENNKTTFISEFGLEGCKEMCVNLTEEC 263
Query: 267 KQELAYFDPTRAAPLDHLVNFIV 289
+ L + L+++ F++
Sbjct: 264 LKLLKQI-KSNTGELENITEFLM 285
>gi|229061868|ref|ZP_04199198.1| Geranyltranstransferase [Bacillus cereus AH603]
gi|228717429|gb|EEL69097.1| Geranyltranstransferase [Bacillus cereus AH603]
Length = 297
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|163941936|ref|YP_001646820.1| polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|229135000|ref|ZP_04263806.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|229168922|ref|ZP_04296639.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|423368233|ref|ZP_17345665.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|423512293|ref|ZP_17488824.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
gi|423518883|ref|ZP_17495364.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|423591823|ref|ZP_17567854.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|423660971|ref|ZP_17636140.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|423669765|ref|ZP_17644794.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|163864133|gb|ABY45192.1| Polyprenyl synthetase [Bacillus weihenstephanensis KBAB4]
gi|228614514|gb|EEK71622.1| Geranyltranstransferase [Bacillus cereus AH621]
gi|228648502|gb|EEL04531.1| Geranyltranstransferase [Bacillus cereus BDRD-ST196]
gi|401080984|gb|EJP89264.1| hypothetical protein IC3_03334 [Bacillus cereus VD142]
gi|401159938|gb|EJQ67317.1| hypothetical protein IG7_03953 [Bacillus cereus HuA2-4]
gi|401231956|gb|EJR38458.1| hypothetical protein IIG_00691 [Bacillus cereus VD048]
gi|401298892|gb|EJS04492.1| hypothetical protein IKO_03462 [Bacillus cereus VDM034]
gi|401301012|gb|EJS06601.1| hypothetical protein IKM_01368 [Bacillus cereus VDM022]
gi|402449264|gb|EJV81101.1| hypothetical protein IG3_03790 [Bacillus cereus HuA2-1]
Length = 297
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|384182008|ref|YP_005567770.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324328092|gb|ADY23352.1| geranyltranstransferase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 296
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKEKNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSNATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|354582557|ref|ZP_09001458.1| Polyprenyl synthetase [Paenibacillus lactis 154]
gi|353198849|gb|EHB64315.1| Polyprenyl synthetase [Paenibacillus lactis 154]
Length = 301
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 166/269 (61%), Gaps = 21/269 (7%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LH +M YSL GGKRL L IA+CE GGS+ A+ +ACA+E++ T ++I DDLP
Sbjct: 33 PETLHRSMTYSLMAGGKRLRPLLVIAACEAAGGSREAALPVACAVEMVHTYSLIHDDLPA 92
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------IKAKNINSAV----- 147
+D+DD RRGKP+NHKVFGEA AILA AL A I I A + S V
Sbjct: 93 MDDDDFRRGKPTNHKVFGEAAAILAGDALLTHAFYSIVQSSRKHGIPADRVLSIVEDLAE 152
Query: 148 --GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
G G+ GQ+ D+ E SL +L +IH HKT I S+++G + G +E +I+ +
Sbjct: 153 YAGPRGMVGGQVADMEGEQGLTSLEQLEYIHLHKTSDLIMFSLMAGGRVAGCSEAQIDSL 212
Query: 206 RNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
R+FGK++G+A+Q+ +DI+D+IG ++ + T D+ ++K TYP +G++ SK+ + L A
Sbjct: 213 RSFGKHIGLAFQIQDDILDLIGDEAKLGKPTQSDVKQEKVTYPFFIGLEASKREVERLTA 272
Query: 265 EAKQELA---YFDPTRAAPLDHLVNFIVS 290
EAK ++ + DP+R L + +F+++
Sbjct: 273 EAKSAISEGNFPDPSR---LHEIADFLLA 298
>gi|229174855|ref|ZP_04302375.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|423478323|ref|ZP_17455038.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
gi|228608523|gb|EEK65825.1| Geranyltranstransferase [Bacillus cereus MM3]
gi|402428485|gb|EJV60582.1| hypothetical protein IEO_03781 [Bacillus cereus BAG6X1-1]
Length = 296
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|325516286|gb|ADZ24721.1| geranylgeranyl pyrophosphate synthase 4 [Solanum pennellii]
Length = 334
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 157/272 (57%), Gaps = 24/272 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y IN+ LDEAVP+ +P ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 41 FDLKTYWTTLIVDINQKLDEAVPVKYPNQIYEAMRYSVLAKGAKRSPPIMCVAACELFGG 100
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ A ACA+E++ ++I DDLPC+D+D RRG P+NH VFG AILA AL L
Sbjct: 101 NRLAAFPTACALEMVHAASLIHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLG 160
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI I++ I AVGS G+AAGQ +D+ E + ++F+
Sbjct: 161 FQHIVSHTPSDLVPEDRILRVITEIARAVGSTGMAAGQFLDL-----EGGPNAVDFVQEK 215
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G ++ G ++EEI+ MR +G+ VG+ Y++ +DI++ + + E
Sbjct: 216 KYGEMGECSAVCGALLAGASDEEIQHMRKYGRAVGVLYRVVDDILEAKKTEDKTEGK--- 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+ +Y + GI+ + K A++L A+AK+EL
Sbjct: 273 -KKKGKSYVSVYGIEKAVKVAEDLRAQAKREL 303
>gi|357012959|ref|ZP_09077958.1| polyprenyl synthetase [Paenibacillus elgii B69]
Length = 301
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 157/291 (53%), Gaps = 17/291 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY A I L +++P PA L E+M YSL GGKRL L +A+ E +GGS
Sbjct: 7 IREYIRDMASLIERELQQSIPSSWAIPAPLRESMMYSLMAGGKRLRPILVLAAAEALGGS 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ A A+E++ T ++I DDLP +DNDD RRGKP+NHKV+GEA AILA AL A
Sbjct: 67 PEAAVPAALAVEIIHTYSLIHDDLPAMDNDDFRRGKPTNHKVYGEAMAILAGDALLTHAF 126
Query: 133 QHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ K+ ++ G+ G+ GQ D+ E L EL +IH HK
Sbjct: 127 YSVVQSARKHNIPADRVVDIVEELSRLSGAPGMVGGQAADMLGEQGVTKLEELEYIHLHK 186
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRD 238
T I S+ +G I G E ++ + FG +G+A+Q+ +D++D+IG ++ + D
Sbjct: 187 TSDLIVFSLKAGGRIAGATEAQLAALERFGTCIGLAFQIQDDVLDLIGDESKLGKPVQSD 246
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ + K TYP +GI+ S A EL EAKQ + D R L L ++++
Sbjct: 247 VKQQKVTYPYFIGIEASISKAGELTREAKQAILAADFPRPERLLELADYLM 297
>gi|194366666|ref|YP_002029276.1| polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349470|gb|ACF52593.1| Polyprenyl synthetase [Stenotrophomonas maltophilia R551-3]
Length = 292
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 153/261 (58%), Gaps = 13/261 (4%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS ++ G + A A
Sbjct: 13 RIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGQLFGAQPESLDAAAMA 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ +F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELAYF 273
DG+K +EL A + LA +
Sbjct: 253 DGAKAQLRELAARMQSTLAGY 273
>gi|423400972|ref|ZP_17378145.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
gi|401653962|gb|EJS71505.1| hypothetical protein ICW_01370 [Bacillus cereus BAG2X1-2]
Length = 296
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLGAGGKRLRPLLLFATLQAFGKERNLGIGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|229013396|ref|ZP_04170533.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|423489365|ref|ZP_17466047.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
gi|423495088|ref|ZP_17471732.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|423498118|ref|ZP_17474735.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|423598501|ref|ZP_17574501.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|228747808|gb|EEL97674.1| Geranyltranstransferase [Bacillus mycoides DSM 2048]
gi|401151181|gb|EJQ58633.1| hypothetical protein IEW_03986 [Bacillus cereus CER057]
gi|401161405|gb|EJQ68772.1| hypothetical protein IEY_01345 [Bacillus cereus CER074]
gi|401236771|gb|EJR43228.1| hypothetical protein III_01303 [Bacillus cereus VD078]
gi|402431601|gb|EJV63665.1| hypothetical protein IEU_03988 [Bacillus cereus BtB2-4]
Length = 297
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAK 267
IA+AK
Sbjct: 268 IAKAK 272
>gi|312143726|ref|YP_003995172.1| polyprenyl synthetase [Halanaerobium hydrogeniformans]
gi|311904377|gb|ADQ14818.1| Polyprenyl synthetase [Halanaerobium hydrogeniformans]
Length = 294
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 172/282 (60%), Gaps = 15/282 (5%)
Query: 23 KAKQINEALDEAVPLPHPAI---LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
KA ++ +L+E + L + L EAMRY+L GGKR+ L + + E++ G A+
Sbjct: 11 KAAELENSLEELMELKEDELAPELSEAMRYTLLSGGKRIRPILTLLTTELLKGDYQAALK 70
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
A+E++ + ++I DDLP +D+D LRRGK +NH VFGEA AILA AL A + ++ +
Sbjct: 71 SGSALEMIHSYSLIHDDLPAMDDDQLRRGKKTNHLVFGEAKAILAGDALLTYAFEILSEL 130
Query: 139 KAK---------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + I S G G+ GQ +DI++E KE+SL+E+ IH KTG I+AS++
Sbjct: 131 ELEPAKKIKIIKLIASNSGMLGMVGGQTLDIDAEKKELSLAEMQKIHAAKTGALIKASVL 190
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPK 248
SGV + E E ++ + + +G+ +Q+ +D++DV G E + +K G D DK+TYPK
Sbjct: 191 SGVYCSVYSRTEKEALQKYAENLGVLFQVVDDLLDVTGDTEKLGKKVGSDQKLDKSTYPK 250
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
L+G+DG+++ A E +AK LA F+ A PL LV++++S
Sbjct: 251 LLGVDGAREAAVEYAKKAKNSLAIFEE-EAEPLIKLVDYVLS 291
>gi|229031827|ref|ZP_04187815.1| Geranyltranstransferase [Bacillus cereus AH1271]
gi|228729445|gb|EEL80434.1| Geranyltranstransferase [Bacillus cereus AH1271]
Length = 296
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKGILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|449454249|ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
small subunit, chloroplastic-like [Cucumis sativus]
Length = 335
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 161/291 (55%), Gaps = 24/291 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEAVPL +P ++EAMRYS+ G KR +C+A+CE+ G
Sbjct: 40 FDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMRYSVLAQGAKRAPPVMCVAACELFGV 99
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D RRG+PSNH V+G AILA AL L
Sbjct: 100 DRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 159
Query: 132 MQHIA-------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI + I AVGS G+AAGQ +D+ E + + F+
Sbjct: 160 FQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMAAGQFLDL-----EGGPNSVEFVQEK 214
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ + S V G ++ G + EI+R+R +G+ VG+ YQ+ +DI++ + + T
Sbjct: 215 KFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQVVDDILE--EQSKKLDYTDES 272
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNF 287
+Y ++ GI+ +K+ A+EL A+AK EL F+ + PL V++
Sbjct: 273 KRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGDQVMPLYSFVDY 323
>gi|312793194|ref|YP_004026117.1| polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180334|gb|ADQ40504.1| Polyprenyl synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 299
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 172/294 (58%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K++ E L++ + P I+++AMRYS+ GGKRL LC+ S +M+ Q
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
V + +A AIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I + AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G ++ + M FGK +G+A+Q+ +DI+DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDDVVYDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G++ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLIN 296
>gi|423615482|ref|ZP_17591316.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
gi|401260019|gb|EJR66192.1| hypothetical protein IIO_00808 [Bacillus cereus VD115]
Length = 296
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 158/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q + + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ +E+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|260881089|ref|ZP_05403580.2| geranyltranstransferase [Mitsuokella multacida DSM 20544]
gi|260849479|gb|EEX69486.1| geranyltranstransferase [Mitsuokella multacida DSM 20544]
Length = 298
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 166/289 (57%), Gaps = 15/289 (5%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
E + L KQ+ + L++ PL A L E+MRYSL GGKRL L +A+ + +G +
Sbjct: 13 KERQQLVEKQLVKELEKEPPLD--ARLAESMRYSLMAGGKRLRPILLMAAADAVGAKGTD 70
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
++ ACA+E++ T ++I DDLP +DNDD RRGK +NHKVFG+ A+LA AL LA + I
Sbjct: 71 YLTTACALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDGMAVLAGDALLTLAFEVI 130
Query: 136 A----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+ + I++A G G+ GQ +D+ SEG +S+ +L +H KTG
Sbjct: 131 GRQQHTDPATLLRTVQEISTAAGMNGMVGGQAIDLESEGHRISMEQLRKMHMGKTGALFR 190
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKA 244
A++ SG I+ G +E+++ + + + G+A+Q+ +DI+DV G + K G D+ +K+
Sbjct: 191 AALRSGAILAGASEKQLAALTAYAEGFGLAFQITDDILDVTGDEALIGKPVGSDLRNEKS 250
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
TY L ++ +++ AKE + A L F P A L LV +++ N
Sbjct: 251 TYVTLTSLEEAQRLAKETVDAAVAALDGFGP-EADFLRQLVRYMLERKN 298
>gi|149179199|ref|ZP_01857766.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
gi|148841972|gb|EDL56368.1| Polyprenyl synthetase [Planctomyces maris DSM 8797]
Length = 298
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 169/285 (59%), Gaps = 21/285 (7%)
Query: 20 KALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMS 78
+ L +Q+ EALD++ P IL AM YSL GGKRL L + SCE GG QS A+
Sbjct: 16 QTLVNRQLEEALDQSGDCP--PILKAAMSYSLSAGGKRLRPILVLLSCEACGGDQSTALP 73
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-I 137
ACAIE++ T ++I DDLP +D+D+LRRG P++H FGEA AILA AL A + +A
Sbjct: 74 AACAIEMVHTYSLIHDDLPAMDDDELRRGLPTSHIKFGEANAILAGDALLTRAFELLANQ 133
Query: 138 IKAK--------NINSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHKTGKFIEASI 188
I+ K ++ +A G+ G+ GQ+ D+ SE E +L L IH+ KTG+ I +++
Sbjct: 134 IEVKSCAAACCVDLANAAGAVGMVGGQVADLESEHLENPTLEILEAIHKRKTGRLICSAL 193
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KA 244
G IGG + ++ + +G +G+A+Q+ +D++D+ G EK G+ + +D K
Sbjct: 194 TMGARIGGADPATLKNLERYGTCIGLAFQITDDLLDLTGD---EEKMGKGVRKDADHGKL 250
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TYP L+G++ S++ ++ LI EA +A + L+ L +FI+
Sbjct: 251 TYPSLIGVEESRRRSQNLIEEACLSIAPLG-SHGQRLEELAHFIL 294
>gi|423558242|ref|ZP_17534544.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
gi|401191510|gb|EJQ98532.1| hypothetical protein II3_03446 [Bacillus cereus MC67]
Length = 297
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 159/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRG+P+NHKVFGEA A+LA L A Q I K I++
Sbjct: 88 LPCMDDDDLRRGQPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHKHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|423674030|ref|ZP_17648969.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
gi|401309581|gb|EJS14914.1| hypothetical protein IKS_01573 [Bacillus cereus VDM062]
Length = 297
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 158/249 (63%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKR L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMAYSLEAGGKRFRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK ++++EL +IH HKTGK +E ++++G I+ EE+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLTINELEYIHNHKTGKLLEFAVLAGAILSDATEEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L +D +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTVDRAKSILEEK 267
Query: 263 IAEAKQELA 271
IA+AK ++
Sbjct: 268 IAKAKDSIS 276
>gi|421860464|ref|ZP_16292588.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
gi|410829946|dbj|GAC43025.1| geranylgeranyl pyrophosphate synthase [Paenibacillus popilliae ATCC
14706]
Length = 284
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 147/265 (55%), Gaps = 15/265 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L EAM YSL GGKRL I +CE +GG A +ACAIE+L T +++ DDLP
Sbjct: 16 PAELKEAMLYSLMAGGKRLRPLCVIIACESLGGPLEAADPVACAIEMLHTYSLVHDDLPA 75
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQAL--HCL------AMQH-----IAIIKAKNINS 145
+DNDD RRGKP+NHKVFGEA AILA AL H A +H IA+ + ++
Sbjct: 76 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQSARRHSIPAEIALTITEELSV 135
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
G G+ GQ DI E +L +L +IH HKT I ++ +G + G N ++ +
Sbjct: 136 YAGMRGMVGGQTADILGEQGMTTLVQLEYIHLHKTSDLIVFALRAGAHLAGANGSQLNAL 195
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
FG +G+A+Q+ +DI+D+ G + K TG D K TYP +G++ SK+ L
Sbjct: 196 TEFGTKLGLAFQIQDDILDITGEEVLLGKPTGSDEKCGKVTYPYFIGLEASKQEVVRLTE 255
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIV 289
EAKQ + A L L +F++
Sbjct: 256 EAKQAVRQAGFPFPARLYELADFLL 280
>gi|189425242|ref|YP_001952419.1| polyprenyl synthetase [Geobacter lovleyi SZ]
gi|189421501|gb|ACD95899.1| Polyprenyl synthetase [Geobacter lovleyi SZ]
Length = 297
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 177/289 (61%), Gaps = 27/289 (9%)
Query: 27 INEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++ AL++ +P P LH+AMRYS+ GGKR+ L +A+CE +GG AM ACA+
Sbjct: 14 VDAALEQYLPKEEERPQSLHKAMRYSIFAGGKRVRPVLMLAACEAVGGQIDKAMPAACAM 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ---------- 133
E++ T ++I DDLP +D+DD RRG+P+NHKVFGEA AILA L A +
Sbjct: 74 EMIHTYSLIHDDLPAMDDDDFRRGRPTNHKVFGEAIAILAGDGLLTEAFKLMSDPRFAAG 133
Query: 134 -----HIAIIKAKNINSAVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFIEAS 187
+ +I I + G+ G+ GQ++D+ SEGK ++ L + +IH HKTG I+AS
Sbjct: 134 IDPAARLGVI--HEIATCAGTYGMVGGQVVDMESEGKPDMDLPTVQYIHAHKTGALIKAS 191
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATY 246
+V+G ++GG +++++ +R +G+ G+A+Q+ +DI+D+ G+ E+ + G D R KATY
Sbjct: 192 VVAGALLGGADDKQLAAIRRYGEAAGLAFQIADDILDIEGTTEEIGKDAGSDEARGKATY 251
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAA--PLDHLVNFIVSFGN 293
P ++G+ +K+ A+ ++ EA L +P AA PL + +IV N
Sbjct: 252 PAVMGLAAAKQEAQAMMDEAMLAL---EPLGAAAEPLRAIARYIVERKN 297
>gi|429727348|ref|ZP_19262122.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
gi|429152800|gb|EKX95610.1| putative geranyltranstransferase [Peptostreptococcus anaerobius VPI
4330]
Length = 295
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 158/264 (59%), Gaps = 15/264 (5%)
Query: 39 HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ + EAM YSL GGKRL L + + ++ G + + A+E++ T ++I DDLP
Sbjct: 28 YQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLP 87
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKNINS 145
LDNDDLRRGKP+NH VFGEA AILA AL A + +++ A I+
Sbjct: 88 ALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNATFKHPRPELSLRAAYEISR 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
G G+ GQ++D+ SE K+++ +L++IH +KT I S+ +G I+ G +E+ +E +
Sbjct: 148 GAGIYGMIGGQVVDVESEDKKINKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESL 207
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMR-EKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+ + +G+A+Q+ +DI+D+ G ++ ++ G D+ DK+TYP L+GI SKK + LI
Sbjct: 208 TKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGISESKKIVENLIE 267
Query: 265 EAKQELAYFDPTRAAPLDHLVNFI 288
EAK L FD + A ++ L +FI
Sbjct: 268 EAKISLEVFD-SDAEFMNALADFI 290
>gi|389818539|ref|ZP_10208820.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
gi|388463822|gb|EIM06165.1| geranyltranstransferase [Planococcus antarcticus DSM 14505]
Length = 293
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 157/253 (62%), Gaps = 17/253 (6%)
Query: 28 NEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASC-EMIGGSQSVAMSMACAIEL 85
E ++ + L P L E+M YSL GGKR+ L +A E+ G A+ +A AIE+
Sbjct: 16 QEMAEQILSLSIPNSLKESMHYSLQAGGKRIRPILLLAVLHELSGQEHPDALKVAAAIEM 75
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA------MQHIAI-- 137
+ T ++I DDLP +DNDDLRRG P+NHKVFGEA AILA AL + +QH++
Sbjct: 76 IHTYSLIHDDLPSMDNDDLRRGMPTNHKVFGEAVAILAGDALLTYSFGIVARLQHVSSDD 135
Query: 138 -IKAKNINS-AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG 195
++ ++ S + G+EG+ GQ++DI E K+++L EL +HR KTG + SI++G I+
Sbjct: 136 KVRLMDLMSVSSGAEGMVGGQVLDIEGEEKKLTLEELEQVHRLKTGALLTYSILAGGILA 195
Query: 196 GGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDG 254
+ EEI + FG+++G+A+Q+ +DI+DV G S E+ + G+D +K+TYP L+ +
Sbjct: 196 QASNEEILALSRFGEHIGLAFQIQDDILDVTGTSQELGKTAGKDESSEKSTYPGLLTLPK 255
Query: 255 SKK----HAKELI 263
+K+ HA E I
Sbjct: 256 AKEKLEFHASEAI 268
>gi|78044434|ref|YP_360807.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996549|gb|ABB15448.1| geranyltranstransferase [Carboxydothermus hydrogenoformans Z-2901]
Length = 295
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 154/262 (58%), Gaps = 16/262 (6%)
Query: 25 KQINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
K + E + +P +P ++H+AM YSL GGKRL L +A+ E G + + A
Sbjct: 12 KMVEEGIGRFLPPDDTYPPVIHQAMNYSLKAGGKRLRPVLMLAAGEWSGIAPEKLLPAAV 71
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
+E L T ++I DDLP +DNDD RRGKP+NHKVFGEA AILA AL A + A +
Sbjct: 72 GVECLHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGEAIAILAGDALLTKAFELTAKTLEQ 131
Query: 142 NINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
I + A GSEG+ AGQ++D++S + L +IH +KT + I S++
Sbjct: 132 GIPAERVVRVIQELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHLNKTARLIRYSLI 191
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
+G I+ G EEEI+ + ++G+++G+A+Q+ +D++DV+G ++ + G D K TY
Sbjct: 192 AGGILAGATEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVS 251
Query: 249 LVGIDGSKKHAKELIAEAKQEL 270
L GI+ +KK A+E I AK L
Sbjct: 252 LFGIEETKKRAEEEINAAKNVL 273
>gi|397906448|ref|ZP_10507248.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
gi|397160405|emb|CCJ34585.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Caloramator
australicus RC3]
Length = 291
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 158/263 (60%), Gaps = 17/263 (6%)
Query: 20 KALKAKQ--INEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
KALK KQ IN+ L+E + + P I+ EAM+YSL GGKR+ LCIA CE + G+
Sbjct: 5 KALKDKQQLINKRLEELLSYVDAPQIIIEAMKYSLFAGGKRIRPILCIAVCEALEGNLED 64
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH- 134
+ +AC+IE++ T ++I DDLP +DNDD RRGK +NHKV+G+A AILA L A +
Sbjct: 65 VLDIACSIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGDAIAILAGDGLLNYAFETL 124
Query: 135 IAIIKAKN----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+ +IK KN I A G G+ GQ++DI + G + + L +H KTGK I
Sbjct: 125 LKVIKRKNDKRFVDAAFEIAKASGITGMIGGQVIDITNVGNIIDENLLVSMHERKTGKLI 184
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDK 243
EAS G II E +E R + K +G+A+Q+ +DI+DVIG ++ + G+D +K
Sbjct: 185 EASCNVGAII-ANRYEYLEITREYSKNLGVAFQIVDDILDVIGDEKKLGKSVGKDAKNNK 243
Query: 244 ATYPKLVGIDGSKKHAKELIAEA 266
TY L G++ S++ AKE +A
Sbjct: 244 PTYVTLYGLEKSRELAKEFSLKA 266
>gi|121604406|ref|YP_981735.1| polyprenyl synthetase [Polaromonas naphthalenivorans CJ2]
gi|120593375|gb|ABM36814.1| farnesyl-diphosphate synthase [Polaromonas naphthalenivorans CJ2]
Length = 327
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 161/279 (57%), Gaps = 23/279 (8%)
Query: 12 KFFQVNEYKALKAKQINEAL-------DEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCI 63
F + + A + I AL DEA P PA L +AMRY+ L GGKRL L +
Sbjct: 29 SLFDLRAWSAGQLAAIERALSCWVASPDEA---PAPAGLCDAMRYAVLDGGKRLRPLLVM 85
Query: 64 ASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
A+C + G + A+ ACAIEL+ +++ DD+PC+DND LRRGKP+ H +GEA A+LA
Sbjct: 86 AACAAVNGDAATALRPACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHVQYGEAQALLA 145
Query: 124 CQALHCLAMQHI--------AIIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSEL 172
AL LA + + A +A + + A G +G+A GQ +D+ S G ++ ++L
Sbjct: 146 GDALQALAFELLTPGDDSVDAPTQARLCRLLAQAAGYQGMAGGQAIDLASVGLPLTSAQL 205
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
+ +HR KTG ++AS++ G G + + +R++G +G+A+Q+ +DI+DV
Sbjct: 206 HEMHRLKTGALLQASVMMGAACGAASPTALAALRDYGAAIGLAFQVVDDILDVTADAATL 265
Query: 233 EKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
KT G+D +DK T+ L+G+ S+ +A++L A+A L
Sbjct: 266 GKTAGKDAAQDKPTFVSLMGLQASRAYAQQLHAQALASL 304
>gi|87120692|ref|ZP_01076585.1| geranyltranstransferase [Marinomonas sp. MED121]
gi|86163920|gb|EAQ65192.1| geranyltranstransferase [Marinomonas sp. MED121]
Length = 293
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 166/288 (57%), Gaps = 15/288 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+ ++ ++++ L++ + PA LH AMRYSL GGKR+ L AS +++G
Sbjct: 3 LKQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDIS 62
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S+ + A A+E + ++I DDLP +DND+LRRGKP+ H F EATAILA AL A +
Sbjct: 63 SLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFE 122
Query: 134 ----------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
+AI + + A G G+ GQ++D++SE K +SL+EL +H HKTG
Sbjct: 123 LLSNPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGAL 182
Query: 184 IEASIVSGVI-IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMR 241
I+AS+ G + G E++ ++ + +G+A+Q+ +DI+D+ E KT D
Sbjct: 183 IKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEA 242
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+KATYPKL+G+DG+K L +A +++ F ++ PL L N+I+
Sbjct: 243 NKATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYII 289
>gi|390981228|pdb|4F62|A Chain A, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
gi|390981229|pdb|4F62|B Chain B, Crystal Structure Of A Putative Farnesyl-Diphosphate
Synthase From Marinomonas Sp. Med121 (Target Efi-501980)
Length = 317
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 166/288 (57%), Gaps = 15/288 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+ ++ ++++ L++ + PA LH AMRYSL GGKR+ L AS +++G
Sbjct: 5 LKQFSTYTQSRVDQYLEQQLSDYAPANQLHNAMRYSLFNGGKRIRPMLTYASAQLVGDIS 64
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S+ + A A+E + ++I DDLP +DND+LRRGKP+ H F EATAILA AL A +
Sbjct: 65 SLTDASAAALESIHAYSLIHDDLPAMDNDELRRGKPTCHIQFDEATAILAGDALQTFAFE 124
Query: 134 ----------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
+AI + + A G G+ GQ++D++SE K +SL+EL +H HKTG
Sbjct: 125 LLSNPTSAQPELAIKLIQELVVASGRNGMITGQMIDLSSENKNISLAELEQMHVHKTGAL 184
Query: 184 IEASIVSGVI-IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMR 241
I+AS+ G + G E++ ++ + +G+A+Q+ +DI+D+ E KT D
Sbjct: 185 IKASVRMGALSTGQVKPEQLAKLDAYAHAIGLAFQVQDDIIDLTSDTETLGKTQFSDAEA 244
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+KATYPKL+G+DG+K L +A +++ F ++ PL L N+I+
Sbjct: 245 NKATYPKLLGLDGAKALVVRLHEQAIAQISEFG-DKSQPLTDLANYII 291
>gi|167634585|ref|ZP_02392905.1| geranyltranstransferase [Bacillus anthracis str. A0442]
gi|254741328|ref|ZP_05199015.1| geranyltranstransferase [Bacillus anthracis str. Kruger B]
gi|167530037|gb|EDR92772.1| geranyltranstransferase [Bacillus anthracis str. A0442]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYRQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|344995715|ref|YP_004798058.1| polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963934|gb|AEM73081.1| Polyprenyl synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 299
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 171/294 (58%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K++ E L++ + P I+++AMRYS+ GGKRL LC+ S +M+ Q
Sbjct: 5 KLEEYINLSQKKVEEHLEKILAERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
V + +A AIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL L
Sbjct: 65 EVDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I + AK + + G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRCGCEKNLVKAAKYLFWSSGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G + + M FGK +G+A+Q+ +DI+DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAENDVVSDMEEFGKNLGLAFQIRDDILDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G++ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIQKYDNSEL--LIELTNYLIN 296
>gi|403668188|ref|ZP_10933465.1| geranyltranstransferase [Kurthia sp. JC8E]
Length = 293
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 156/264 (59%), Gaps = 17/264 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P IL EAM YSL GGKR+ +A + + A + A+E++ T ++I DDLP
Sbjct: 29 PEILKEAMSYSLKAGGKRVRPLFVLAVMDHLAEITEEAYIVGAAVEMIHTYSLIHDDLPS 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCL------------AMQHIAIIKAKNINSA 146
+DNDD RRGK +NHKVFGEA A LA AL+ L A Q +A+++ ++
Sbjct: 89 MDNDDYRRGKLTNHKVFGEAYATLAGDALNTLPFGIIARMQNVTAEQKVALVQL--LSET 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQI+DI E K++++ EL +H +KTG + SI +G I+ EE++ +R
Sbjct: 147 AGAEGMVGGQILDIEGETKQLTIDELVHVHVNKTGAILRFSIEAGAILANATEEQLAILR 206
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
++ ++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ ++G+K+
Sbjct: 207 DYAYHIGLAFQIKDDILDIEGTTEQLGKTAGKDVASDKSTYPALLTLEGAKEKLTMHYDA 266
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
+ + L+ P+ L+ L +IV
Sbjct: 267 SLEALSKL-PSEKTLLEQLATYIV 289
>gi|126665230|ref|ZP_01736213.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
gi|126630600|gb|EBA01215.1| Geranylgeranyl pyrophosphate synthase [Marinobacter sp. ELB17]
Length = 299
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 158/261 (60%), Gaps = 14/261 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AMRY L GGKR+ LC+A+ E +GG + +A++ ACA+E++ +++ DDLP +DN
Sbjct: 37 LQDAMRYGLLGGGKRIRPALCLAAAEAVGGQRQIALAPACALEMIHAYSLMHDDLPAMDN 96
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DDLRRG+ + H F E++AILA AL A + +A + K + +A G+ G
Sbjct: 97 DDLRRGRATAHIAFDESSAILAGDALQAEAFRVLATAPRLSAEVKLAMVKALANACGANG 156
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEE-IERMRNFGK 210
+ GQ +D+ S + ++L +L +HRHKTG IEAS+ G + GG + ++ + + +
Sbjct: 157 MVGGQAIDLESVARTLTLDQLENMHRHKTGALIEASVHLGALAGGVKDPALLDALARYAR 216
Query: 211 YVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
+G+A+Q+ +D++D+ G E+ KT G D+ R K TYP L+G G+++ L+AEA +
Sbjct: 217 ALGLAFQVQDDLLDIEGDTEVMGKTQGSDIARGKPTYPALLGPKGARELLARLLAEAHES 276
Query: 270 LAYFDPTRAAPLDHLVNFIVS 290
L +A L + ++IV+
Sbjct: 277 LKGLG-IQADALHAMADYIVA 296
>gi|315639632|ref|ZP_07894772.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
gi|315484593|gb|EFU75049.1| geranyltranstransferase [Enterococcus italicus DSM 15952]
Length = 289
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 149/237 (62%), Gaps = 12/237 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L E+MRYS+ GGKR+ L ++ + + S A+ +A A+EL+ T ++I DDLP +D
Sbjct: 28 LAESMRYSVEAGGKRIRPLLLASTYALYQKNVSQAVCQVAAAVELVHTYSLIHDDLPAMD 87
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA L LA Q + + + + G+ G
Sbjct: 88 NDDLRRGKPTNHKVFGEALAILAGDGLLTLAFQVLGQAELADDKKVACLTLLAQTAGTLG 147
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI +EGK++SL +L IH KTG+ I S+++G IIGG + +E ++ +F +
Sbjct: 148 MVAGQAADIEAEGKQLSLEQLQGIHARKTGELIRFSVIAGGIIGGASAKEQAQLDSFARK 207
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTG-RDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
+G+A+Q+ +D++DV+ + E KT RD + K+TYP+L+GI +K + + EA+
Sbjct: 208 LGLAFQIKDDLLDVLATTEELGKTAHRDSVLQKSTYPQLLGIQKAKDELTKQVNEAR 264
>gi|451948109|ref|YP_007468704.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
gi|451907457|gb|AGF79051.1| geranylgeranyl pyrophosphate synthase [Desulfocapsa sulfexigens DSM
10523]
Length = 298
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 150/264 (56%), Gaps = 20/264 (7%)
Query: 45 EAMRYSL-PGGKRLMSTLCIASCEMIGGS----QSVAMSMACAIELLVTMAVIQDDLPCL 99
EAMRYSL GGKR+ LCIA+ +GG+ Q++ + +ACA+E + T ++I DDLP +
Sbjct: 34 EAMRYSLLAGGKRVRPILCIAAARAVGGNTIDDQNI-LPVACALECIHTYSLIHDDLPAM 92
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AV 147
DND LRRGK +NH ++GEA AILA L A + N++S A
Sbjct: 93 DNDALRRGKATNHVLYGEAGAILAGDGLLTWAFDLLCNPSHGNLDSEKKLAISHCIAHAA 152
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
GS G+ GQ +DI SE L IHR KTG I AS+VSG I G + E+ E ++
Sbjct: 153 GSFGMVGGQALDIASENTRFPFETLQTIHRSKTGALITASVVSGAIAAGADREQSEALKQ 212
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G +G+A+Q+ +D+++ + E K G D+ KATYP GI+ ++K A I +A
Sbjct: 213 YGHQIGLAFQIVDDLLNATATTEQLGKAAGSDIELGKATYPAYFGIEETRKRALNAIEKA 272
Query: 267 KQELAYFDPTRAAPLDHLVNFIVS 290
K L FD +A PL L ++I +
Sbjct: 273 KTCLKDFDD-KAQPLRLLADYIYT 295
>gi|385799804|ref|YP_005836208.1| polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
gi|309389168|gb|ADO77048.1| Polyprenyl synthetase [Halanaerobium praevalens DSM 2228]
Length = 293
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 158/259 (61%), Gaps = 12/259 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L ++M+Y+L GGKR+ L + E++ G+ A+ A+E++ + ++I DDLP +D+
Sbjct: 33 LTKSMKYTLLSGGKRIRPILTLLIAELLEGNYQAALKAGSALEMIHSYSLIHDDLPAMDD 92
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK---------NINSAVGSEGI 152
D LRRGK +NH VFGEATAILA L A Q +A ++ K N G +G+
Sbjct: 93 DKLRRGKKTNHLVFGEATAILAGDGLLTYAFQVLADLELKPDLKVKIIANTAKFSGYQGM 152
Query: 153 AAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYV 212
GQ++D+ +E K+++L E+ +H+ KTG I+AS+++GV EE + + + + +
Sbjct: 153 VGGQVLDLEAENKDLTLQEMQKVHQAKTGALIKASVLNGVYCSDFKPEEKKALLTYAEKI 212
Query: 213 GMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
G+ +Q+ +D++D+ G E M + GRD +KATYPKL+G+ ++K A++ EAK+ L
Sbjct: 213 GVLFQIVDDLLDLTGETEAMGKVVGRDQELNKATYPKLLGLKKAQKEAEKYAKEAKEALI 272
Query: 272 YFDPTRAAPLDHLVNFIVS 290
F +A L+ L++FI+
Sbjct: 273 IFGK-KAEKLEALIDFILK 290
>gi|377556674|ref|ZP_09786367.1| Geranyltranstransferase [Lactobacillus gastricus PS3]
gi|376168074|gb|EHS86883.1| Geranyltranstransferase [Lactobacillus gastricus PS3]
Length = 289
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 164/288 (56%), Gaps = 25/288 (8%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS- 72
QVN+Y + + +DEA L AM YS+ GGKRL T+ + +++G
Sbjct: 10 QVNQYLL---TNLADDIDEAT-------LSAAMNYSVDAGGKRLRPTMTLMVAQILGVEL 59
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
S + ACA+ELL T ++I DDLP +DNDDLRRGKP++HK FGEA AILA L LA
Sbjct: 60 NSDVLRAACALELLHTYSLIHDDLPAMDNDDLRRGKPTSHKQFGEAIAILAGDGLLTLAF 119
Query: 133 QHI------AIIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
Q + A +KA+ ++ A G G+ AGQ+ DI S GK +S+ L +H KTG
Sbjct: 120 QWLTDNQLSANVKARLTLELSKAAGPVGMVAGQVRDILSTGKTLSIERLQKLHAQKTGAL 179
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRD 242
++ + V+G +I +E + + NFG G+A+Q+++DI+DV S ++ + T +D R
Sbjct: 180 LKYATVAGGVIAEVGDEVVAELANFGALYGLAFQIYDDILDVTATSADLGKATHKDAERG 239
Query: 243 KATYPKLVGIDGSKKHAKELIAEAK---QELAYFDPTRAAPLDHLVNF 287
K +YP L+G+ G++K +++ AK + L + LD L+ +
Sbjct: 240 KNSYPALLGLPGAEKKLSQVLTAAKVSQERLTTLTQADFSRLDELLAY 287
>gi|312127936|ref|YP_003992810.1| polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311777955|gb|ADQ07441.1| Polyprenyl synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 299
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 172/294 (58%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K++ E L++ + P I+++AMRYS+ GGKRL LC+ S +M+ Q
Sbjct: 5 ELEEYINLSQKKVEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQ 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
V + +A AIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL L
Sbjct: 65 IVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I I AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G ++ + + +GK +G+A+Q+ +D++DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G++ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLIN 296
>gi|224369661|ref|YP_002603825.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
gi|223692378|gb|ACN15661.1| putative polyprenyl synthetase [Desulfobacterium autotrophicum
HRM2]
Length = 316
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 18 EYKA-LKAKQ--INEALDEAVPLPHPAI-LHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
++KA LKA+Q +NE L + P L AM +SL GGKRL LC+A+CE
Sbjct: 17 DFKAYLKARQTLVNERLGAILGSLDPRRELTCAMGHSLMAGGKRLRPILCLAACEACSAP 76
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E++ T +++ DDLP +DNDDLRRG P+ H+ FGE+TAILA L A
Sbjct: 77 LEPALPAACALEMIHTYSLVHDDLPAMDNDDLRRGIPTCHRAFGESTAILAGDGLLTHAF 136
Query: 133 QHIAIIKAKN-----------------INSAVGSEGIAAGQIMDI---NSEGKEVSLSEL 172
Q ++ + +N I+ A G G+ GQ++D+ N++ SL L
Sbjct: 137 QILS--RPENLFKVFPDPGVRLELVAIISDAAGINGMVEGQMLDMLLQNADETVTSLELL 194
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
IH KTG I AS+V+G + G + IE + + + +G+A+Q+ +DI+DV G P +
Sbjct: 195 TQIHTLKTGGMIRASVVAGAVSAGADNAMIESLAVYAEKIGLAFQIVDDILDVEGDPTVM 254
Query: 233 EKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KT G D+ K T+P +G++ S+K+A+E+I EA + L FD + PL + +I+
Sbjct: 255 GKTAGSDVDNRKMTFPSFMGLEASRKYAQEIINEAVKALDLFDEKKTLPLKAIAAYIL 312
>gi|254824578|ref|ZP_05229579.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
gi|293593816|gb|EFG01577.1| geranyltranstransferase [Listeria monocytogenes FSL J1-194]
Length = 293
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 150/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E +A AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVAIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|219854470|ref|YP_002471592.1| hypothetical protein CKR_1127 [Clostridium kluyveri NBRC 12016]
gi|219568194|dbj|BAH06178.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 298
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 12/240 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++++M YSL GGKR+ L + + M S M +A AIE++ T ++I DDLP +DN
Sbjct: 37 IYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDN 96
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRGKP+NHK+FGEA AIL AL HC+ AI I+ + G+EG
Sbjct: 97 DDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGENAIRACSIISESAGAEG 156
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ +DI SE ++S+ +L ++H KTG I+ASIVS + EEEI++++ +G+
Sbjct: 157 MIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEK 216
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+A+Q+ +DI+DV+G + +KT D+ DK T+ + G+D + E+ E + L
Sbjct: 217 LGLAFQIKDDILDVLGDDAVLGKKTKSDLNNDKTTFVTVYGLDRCDRMCSEITKECMEIL 276
>gi|344208331|ref|YP_004793472.1| geranyltranstransferase [Stenotrophomonas maltophilia JV3]
gi|343779693|gb|AEM52246.1| Geranyltranstransferase [Stenotrophomonas maltophilia JV3]
Length = 292
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 13/261 (4%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS + G + A A
Sbjct: 13 RIESQLDAALPSPAEAPQGLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPENLDAAAMA 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDGFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELAYF 273
DG+K +EL A + LA +
Sbjct: 253 DGAKAQLRELAARMQATLAGY 273
>gi|153953855|ref|YP_001394620.1| hypothetical protein CKL_1230 [Clostridium kluyveri DSM 555]
gi|146346736|gb|EDK33272.1| Fps [Clostridium kluyveri DSM 555]
Length = 293
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 145/240 (60%), Gaps = 12/240 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++++M YSL GGKR+ L + + M S M +A AIE++ T ++I DDLP +DN
Sbjct: 32 IYDSMEYSLNAGGKRIRPMLFLLTYRMYNKDYSKVMDIAAAIEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRGKP+NHK+FGEA AIL AL HC+ AI I+ + G+EG
Sbjct: 92 DDLRRGKPTNHKIFGEAIAILGGDALLNEAMSIMFRHCIGKGENAIRACSIISESAGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ +DI SE ++S+ +L ++H KTG I+ASIVS + EEEI++++ +G+
Sbjct: 152 MIGGQTVDILSENVKISVDKLYYMHSRKTGAIIKASIVSAAVYASTGEEEIDKLKCYGEK 211
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+A+Q+ +DI+DV+G + +KT D+ DK T+ + G+D + E+ E + L
Sbjct: 212 LGLAFQIKDDILDVLGDDAVLGKKTKSDLNNDKTTFVTVYGLDRCDRMCSEITKECMEIL 271
>gi|429765588|ref|ZP_19297873.1| putative geranyltranstransferase [Clostridium celatum DSM 1785]
gi|429186039|gb|EKY27002.1| putative geranyltranstransferase [Clostridium celatum DSM 1785]
Length = 291
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 19/244 (7%)
Query: 38 PHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
+ I++++ YS+ GGKR+ L I + M + +A AIE++ T ++I DDL
Sbjct: 24 SYNKIIYDSASYSINIGGKRIRPILMILTYSMYKDKWKDIIEVASAIEMIHTYSLIHDDL 83
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-----------AIIKAKNINS 145
PC+DNDDLRRGKP+NHKV+GE A+LA AL AM + A++ I+
Sbjct: 84 PCMDNDDLRRGKPTNHKVYGEDIAVLAGDALLNEAMTLMIKYSLNSVNKNALLATYKISE 143
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
A G G+ AGQI+DI +EGK++S EL ++H KTG+ I+ SIV+G ++G EEE+ ++
Sbjct: 144 AAGMNGMIAGQIVDIINEGKKISADELKYMHAKKTGELIKVSIVAGALLGDAKEEEVSKL 203
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KATYPKLVGIDGSKKHAKE 261
FG+ +G+A+Q+ +DI+DVIGS EK G+ ++ D K + + G++ +K K
Sbjct: 204 EVFGEKLGLAFQIKDDILDVIGST---EKLGKTVLSDEENNKTNFISMYGLEFCQKECKR 260
Query: 262 LIAE 265
L E
Sbjct: 261 LTNE 264
>gi|302185471|ref|ZP_07262144.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae 642]
Length = 295
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 171/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFQAPAPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD T A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD-TAAEPLRQLARYIV 291
>gi|46907589|ref|YP_013978.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47093750|ref|ZP_00231500.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|226223964|ref|YP_002758071.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254932322|ref|ZP_05265681.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|386732101|ref|YP_006205597.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|405749705|ref|YP_006673171.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|405752580|ref|YP_006676045.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406704134|ref|YP_006754488.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|417314624|ref|ZP_12101320.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|417317507|ref|ZP_12104124.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|424714237|ref|YP_007014952.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
gi|424823124|ref|ZP_18248137.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|46880857|gb|AAT04155.1| geranyltranstransferase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017871|gb|EAL08654.1| geranyltranstransferase [Listeria monocytogenes str. 4b H7858]
gi|225876426|emb|CAS05135.1| Putative Trans-Isoprenyl Diphosphate Synthase [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|293583878|gb|EFF95910.1| geranyltranstransferase [Listeria monocytogenes HPB2262]
gi|328467501|gb|EGF38570.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes J1816]
gi|328475077|gb|EGF45865.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
J1-220]
gi|332311804|gb|EGJ24899.1| Geranyltranstransferase [Listeria monocytogenes str. Scott A]
gi|384390859|gb|AFH79929.1| Trans-Isoprenyl Diphosphate Synthase [Listeria monocytogenes
07PF0776]
gi|404218905|emb|CBY70269.1| geranyltranstransferase [Listeria monocytogenes ATCC 19117]
gi|404221780|emb|CBY73143.1| geranyltranstransferase [Listeria monocytogenes SLCC2378]
gi|406361164|emb|CBY67437.1| geranyltranstransferase [Listeria monocytogenes L312]
gi|424013421|emb|CCO63961.1| Farnesyl diphosphate synthase [Listeria monocytogenes serotype 4b
str. LL195]
Length = 293
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 150/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E +A AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVAIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|164688608|ref|ZP_02212636.1| hypothetical protein CLOBAR_02253 [Clostridium bartlettii DSM
16795]
gi|164603021|gb|EDQ96486.1| polyprenyl synthetase [Clostridium bartlettii DSM 16795]
Length = 295
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 162/284 (57%), Gaps = 17/284 (5%)
Query: 23 KAKQINEALDEAVPLP--HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSM 79
K+ I + L + +P + + EAM YSL GGKRL L + S ++IGG +
Sbjct: 10 KSAYIEDLLKQYMPKEEGYQKTIFEAMNYSLSSGGKRLRPILTLESAKIIGGDVKEVIPF 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---- 135
AIE++ T ++I DDLP +DNDD RRGKP+NHKVFG+ A LA AL A + +
Sbjct: 70 CVAIEMIHTYSLIHDDLPAMDNDDFRRGKPTNHKVFGDGMATLAGDALLNYAFEIMLKES 129
Query: 136 -----AIIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
A I+ K I G G+ GQ++DI SE K + +L+FIH +KT I
Sbjct: 130 LGKENADIRLKAIYEIARGAGIYGMIGGQVVDIESENKSIEKEKLDFIHMNKTAAMIIGC 189
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATY 246
+ +G I+G E++++ + + K +G+A+Q+ +DI+D++G + + + G D+ K+TY
Sbjct: 190 MRAGAIMGNACEDDLQNITKYAKNIGLAFQIVDDILDIVGDEKALGKPVGSDIENHKSTY 249
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
P L+G+D SKK A +LI EAK + + L+ L ++I+S
Sbjct: 250 PSLIGLDESKKVATDLIKEAKDSIRKI-SGESRFLEDLADYIIS 292
>gi|386719412|ref|YP_006185738.1| octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
gi|384078974|emb|CCH13569.1| Octaprenyl-diphosphate synthase [Stenotrophomonas maltophilia D457]
Length = 292
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/259 (38%), Positives = 151/259 (58%), Gaps = 13/259 (5%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS + G + A A
Sbjct: 13 RIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPEQLDAAAMA 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ +F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDEAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELA 271
DG+K +EL A + LA
Sbjct: 253 DGAKAQLRELAARMQATLA 271
>gi|312622735|ref|YP_004024348.1| polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203202|gb|ADQ46529.1| Polyprenyl synthetase [Caldicellulosiruptor kronotskyensis 2002]
Length = 299
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 172/294 (58%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K+I E L++ + P I+++AMRYS+ GGKRL LC+ S +M+ Q
Sbjct: 5 ELEEYINLSQKKIEEHLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMLSKDQ 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ + +A AIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL L
Sbjct: 65 EINQKVLDIASAIELIHTYSLIHDDLPAMDNDILRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I + AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G ++ + + +GK +G+A+Q+ +D++DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDDVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G++ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLIN 296
>gi|259503553|ref|ZP_05746455.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
gi|259168466|gb|EEW52961.1| geranyltranstransferase [Lactobacillus antri DSM 16041]
Length = 291
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 145/237 (61%), Gaps = 12/237 (5%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCLD 100
L +MRYS + GGKRL TL +A+ E++GG + M A A+ELL T ++I DDLP +D
Sbjct: 29 LAASMRYSTMAGGKRLRPTLTLATVEILGGQLDADVMRAATALELLHTYSLIHDDLPAMD 88
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------AIIKAK---NINSAVGSEG 151
NDDLRRG P+NH+ FG A LA L LA Q + A +K++ + A G G
Sbjct: 89 NDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNHLPAAVKSRLALELAKAAGPAG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI G+++SL +L ++HR KTG + ++++G II E+ + FG
Sbjct: 149 MVAGQARDIEGTGQQLSLDQLRYLHRQKTGALLRYAVLAGGIITAQPEKVQRLLAQFGAS 208
Query: 212 VGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+A+Q+++D++DV+G+ +M ++ G+D K TYP L+G+ G+++ + + +A+
Sbjct: 209 YGLAFQIYDDLMDVVGTTAQMGKQVGKDAAEHKNTYPGLLGVAGAEEQLHQALHQAR 265
>gi|319943220|ref|ZP_08017503.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
gi|319743762|gb|EFV96166.1| geranyltranstransferase [Lautropia mirabilis ATCC 51599]
Length = 322
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 159/291 (54%), Gaps = 26/291 (8%)
Query: 24 AKQINEALDEAVPLPH-------PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSV 75
A + EAL +P P P LHEAMRY+ L GGKR+ L A+ E++G V
Sbjct: 29 AAHVEEALAARLPGPSGQAPGLAPDRLHEAMRYAVLGGGKRVRPLLVYAAGELVGADARV 88
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
ACA+EL+ +++ DD+P +DNDD+RRGKP+ H+ +GEA A+L AL LA + +
Sbjct: 89 LDGAACAVELIHVYSLVHDDMPAMDNDDMRRGKPTVHRQYGEAMAMLVGDALQALAFEVL 148
Query: 136 ---------------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A + A GS G+A GQ +DI G +S +L +HR KT
Sbjct: 149 VAPLVEADPQAARVPAATMVAVLARAAGSWGMAGGQALDIEGVGLRLSRPQLEAMHRAKT 208
Query: 181 GKFIEASIVSGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G + S+ G++ GG ++ E M+ +G+ +G+A+Q+ +DI+DV KT G+D
Sbjct: 209 GAMLSVSVELGLLAGGQPSADLAEAMQRYGRAIGLAFQVVDDILDVTADSATLGKTAGKD 268
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DK TY L+G++G++ A +L A+A L P RA L L +FIV
Sbjct: 269 QAQDKPTYVSLLGLEGARALATDLHAQAHACLQALGP-RADRLRMLADFIV 318
>gi|228935501|ref|ZP_04098319.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228824253|gb|EEM70067.1| Geranyltranstransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 296
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 155/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEF 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|16803403|ref|NP_464888.1| hypothetical protein lmo1363 [Listeria monocytogenes EGD-e]
gi|254827624|ref|ZP_05232311.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284801748|ref|YP_003413613.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284994890|ref|YP_003416658.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|386050339|ref|YP_005968330.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|386053616|ref|YP_005971174.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404283854|ref|YP_006684751.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|405758410|ref|YP_006687686.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|16410779|emb|CAC99441.1| lmo1363 [Listeria monocytogenes EGD-e]
gi|258600002|gb|EEW13327.1| geranyltranstransferase [Listeria monocytogenes FSL N3-165]
gi|284057310|gb|ADB68251.1| hypothetical protein LM5578_1502 [Listeria monocytogenes 08-5578]
gi|284060357|gb|ADB71296.1| hypothetical protein LM5923_1455 [Listeria monocytogenes 08-5923]
gi|346424185|gb|AEO25710.1| geranyltranstransferase [Listeria monocytogenes FSL R2-561]
gi|346646267|gb|AEO38892.1| geranyltranstransferase [Listeria monocytogenes Finland 1998]
gi|404233356|emb|CBY54759.1| geranyltranstransferase [Listeria monocytogenes SLCC2372]
gi|404236292|emb|CBY57694.1| geranyltranstransferase [Listeria monocytogenes SLCC2479]
gi|441471036|emb|CCQ20791.1| Farnesyl diphosphate synthase [Listeria monocytogenes]
gi|441474163|emb|CCQ23917.1| Farnesyl diphosphate synthase [Listeria monocytogenes N53-1]
Length = 293
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADLEAENKQVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|30264253|ref|NP_846630.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47529696|ref|YP_021045.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187080|ref|YP_030332.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49478571|ref|YP_038239.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52141318|ref|YP_085511.1| geranyltranstransferase [Bacillus cereus E33L]
gi|65321563|ref|ZP_00394522.1| COG0142: Geranylgeranyl pyrophosphate synthase [Bacillus anthracis
str. A2012]
gi|118479369|ref|YP_896520.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|165872980|ref|ZP_02217602.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167638604|ref|ZP_02396880.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170687399|ref|ZP_02878616.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|170709043|ref|ZP_02899473.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|177654844|ref|ZP_02936601.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190565928|ref|ZP_03018847.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|196034877|ref|ZP_03102284.1| geranyltranstransferase [Bacillus cereus W]
gi|196046422|ref|ZP_03113648.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218905314|ref|YP_002453148.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225866160|ref|YP_002751538.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227816954|ref|YP_002816963.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228916814|ref|ZP_04080379.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929224|ref|ZP_04092251.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228947895|ref|ZP_04110182.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229186421|ref|ZP_04313585.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|229601140|ref|YP_002868472.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|254683942|ref|ZP_05147802.1| geranyltranstransferase [Bacillus anthracis str. CNEVA-9066]
gi|254721777|ref|ZP_05183566.1| geranyltranstransferase [Bacillus anthracis str. A1055]
gi|254736290|ref|ZP_05193996.1| geranyltranstransferase [Bacillus anthracis str. Western North
America USA6153]
gi|254754038|ref|ZP_05206073.1| geranyltranstransferase [Bacillus anthracis str. Vollum]
gi|254757909|ref|ZP_05209936.1| geranyltranstransferase [Bacillus anthracis str. Australia 94]
gi|301055671|ref|YP_003793882.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|376268075|ref|YP_005120787.1| geranyltranstransferase [Bacillus cereus F837/76]
gi|386738069|ref|YP_006211250.1| polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|421506438|ref|ZP_15953361.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|421638259|ref|ZP_16078855.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
gi|423550076|ref|ZP_17526403.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|30258898|gb|AAP28116.1| geranyltranstransferase [Bacillus anthracis str. Ames]
gi|47504844|gb|AAT33520.1| geranyltranstransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181007|gb|AAT56383.1| geranyltranstransferase [Bacillus anthracis str. Sterne]
gi|49330127|gb|AAT60773.1| geranyltranstransferase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51974787|gb|AAU16337.1| geranyltranstransferase [Bacillus cereus E33L]
gi|118418594|gb|ABK87013.1| farnesyl-diphosphate synthase [Bacillus thuringiensis str. Al
Hakam]
gi|164711263|gb|EDR16818.1| geranyltranstransferase [Bacillus anthracis str. A0488]
gi|167513452|gb|EDR88822.1| geranyltranstransferase [Bacillus anthracis str. A0193]
gi|170126070|gb|EDS94967.1| geranyltranstransferase [Bacillus anthracis str. A0389]
gi|170668594|gb|EDT19340.1| geranyltranstransferase [Bacillus anthracis str. A0465]
gi|172080505|gb|EDT65591.1| geranyltranstransferase [Bacillus anthracis str. A0174]
gi|190562847|gb|EDV16813.1| geranyltranstransferase [Bacillus anthracis str. Tsiankovskii-I]
gi|195992416|gb|EDX56377.1| geranyltranstransferase [Bacillus cereus W]
gi|196022892|gb|EDX61573.1| geranyltranstransferase [Bacillus cereus 03BB108]
gi|218538297|gb|ACK90695.1| geranyltranstransferase [Bacillus cereus AH820]
gi|225790308|gb|ACO30525.1| geranyltranstransferase [Bacillus cereus 03BB102]
gi|227007089|gb|ACP16832.1| geranyltranstransferase [Bacillus anthracis str. CDC 684]
gi|228597048|gb|EEK54704.1| Geranyltranstransferase [Bacillus cereus BGSC 6E1]
gi|228811882|gb|EEM58216.1| Geranyltranstransferase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228830514|gb|EEM76124.1| Geranyltranstransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843001|gb|EEM88084.1| Geranyltranstransferase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229265548|gb|ACQ47185.1| geranyltranstransferase [Bacillus anthracis str. A0248]
gi|300377840|gb|ADK06744.1| geranyltranstransferase [Bacillus cereus biovar anthracis str. CI]
gi|364513875|gb|AEW57274.1| Geranyltranstransferase (farnesyldiphosphate synthase) [Bacillus
cereus F837/76]
gi|384387921|gb|AFH85582.1| Polyprenyl synthetase [Bacillus anthracis str. H9401]
gi|401189692|gb|EJQ96742.1| hypothetical protein IGW_00707 [Bacillus cereus ISP3191]
gi|401823431|gb|EJT22578.1| polyprenyl synthetase [Bacillus anthracis str. UR-1]
gi|403394685|gb|EJY91925.1| polyprenyl synthetase [Bacillus anthracis str. BF1]
Length = 296
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 155/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|377831222|ref|ZP_09814203.1| geranyltranstransferase [Lactobacillus mucosae LM1]
gi|377554900|gb|EHT16598.1| geranyltranstransferase [Lactobacillus mucosae LM1]
Length = 291
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 148/249 (59%), Gaps = 13/249 (5%)
Query: 26 QINEALDEAVPLP-HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACA 82
+I+ LD+A+P+ L E+M YS+ GGKRL L +A+ EM+G A+ ACA
Sbjct: 11 RIDAYLDQALPMDIDQPTLKESMCYSVEAGGKRLRPALTLATIEMLGKKIDQNALRAACA 70
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ-----HIAI 137
+ELL T ++I DDLP +DNDDLRRG+P+NH FG A LA L LA Q + +
Sbjct: 71 LELLHTYSLIHDDLPAMDNDDLRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTDNQLPV 130
Query: 138 IKAKNIN----SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
N+ A G G+ AGQ DI EG+ + L+EL ++HR KTG ++ ++ +G I
Sbjct: 131 DVQANLTLALAKAAGPSGMVAGQARDIEGEGQHLKLTELQYLHRQKTGALLKYAVQAGGI 190
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGI 252
I I+ + FG G+A+Q+++DI+DV+ +P +M + T +D K TYP L+G+
Sbjct: 191 ITEQPVTVIDLLGTFGAQFGLAFQIYDDIMDVVATPAQMGKATQKDAAEHKNTYPGLLGL 250
Query: 253 DGSKKHAKE 261
DG+K+ ++
Sbjct: 251 DGAKEQLQK 259
>gi|28867927|ref|NP_790546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969291|ref|ZP_03397429.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
gi|301381795|ref|ZP_07230213.1| geranyltranstransferase [Pseudomonas syringae pv. tomato Max13]
gi|302061005|ref|ZP_07252546.1| geranyltranstransferase [Pseudomonas syringae pv. tomato K40]
gi|302130543|ref|ZP_07256533.1| geranyltranstransferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28851163|gb|AAO54241.1| geranyltranstransferase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925969|gb|EEB59526.1| geranyltranstransferase [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKA-------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRNAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L+ FD T A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKGYALELRDQALAALSLFDTT-AEPLRELARYIV 291
>gi|389774289|ref|ZP_10192408.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
gi|388437888|gb|EIL94643.1| geranyltranstransferase [Rhodanobacter spathiphylli B39]
Length = 302
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 153/267 (57%), Gaps = 19/267 (7%)
Query: 25 KQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++ +ALD +P PA LH AMRY+ L GGKRL L A+ + +G + + AC
Sbjct: 19 QRAEQALDRHLPSAGHSPAELHRAMRYAVLSGGKRLRPLLVYAAAQALGHDSATLDAPAC 78
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
A+EL+ +++ DDLP +D+D LRRG+P+ H VFGEA AILA AL LA + +A A+
Sbjct: 79 AVELIHAYSLVHDDLPAMDDDALRRGRPTCHIVFGEAMAILAGDALQALAFEILADDAAR 138
Query: 142 NINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ +A G+EG+A GQ +D+ + G+ + L +L +H KTG I AS+
Sbjct: 139 QVEAATGIAMLRALGRACGAEGMAGGQALDLAAVGRHLGLDQLEHMHACKTGALIRASVQ 198
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
G + G ++ ++ + + VG+A+Q+ +DI+DV G + KT G+D DK T+P
Sbjct: 199 LGALAAGADDGMLQSLDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAAADKPTFPS 258
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDP 275
++G+D S+ EL +Q LA P
Sbjct: 259 IIGLDASRARLAELT---EQALAAIAP 282
>gi|229123698|ref|ZP_04252893.1| Geranyltranstransferase [Bacillus cereus 95/8201]
gi|228659833|gb|EEL15478.1| Geranyltranstransferase [Bacillus cereus 95/8201]
Length = 296
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 155/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMKAEGKQLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|422659619|ref|ZP_16722043.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331018236|gb|EGH98292.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 295
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKA-------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRDAATRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L+ FD T A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKGYALELRDQALAALSLFDTT-AEPLRELARYIV 291
>gi|149181862|ref|ZP_01860351.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
gi|148850401|gb|EDL64562.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. SG-1]
Length = 295
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 146/247 (59%), Gaps = 12/247 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P + EAM YSL GGKR+ L A+ +G + + A A+E++ T ++I DDLP
Sbjct: 31 PEKVKEAMAYSLKAGGKRIRPLLLFATLHTLGKDPKIGLESAAALEMIHTYSLIHDDLPS 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVG 148
+DNDDLRRGKP+NHKVFGEATAILA L + + +A I + + G
Sbjct: 91 MDNDDLRRGKPTNHKVFGEATAILAGDGLLTYSFEVLAGTPDVSAEKLIRLVSLLAKSAG 150
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
EG+ GQ D+ E + +S+ EL +IH++KTG+ + S+++ I+ EE+I + +
Sbjct: 151 PEGMVGGQAADMEGESQSLSVEELEYIHKNKTGRLLAFSVMAAAILADSTEEQISLLEEY 210
Query: 209 GKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
++G+A+Q+ +DI+DV GS E + + G D + K+TYP L+ ++G+K+ + + + K
Sbjct: 211 AFHIGLAFQIQDDILDVEGSEEKIGKPVGSDENKFKSTYPALLTLEGAKEKLRNHLQKGK 270
Query: 268 QELAYFD 274
LA D
Sbjct: 271 SALAASD 277
>gi|290893528|ref|ZP_06556511.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
gi|290556873|gb|EFD90404.1| LOW QUALITY PROTEIN: geranyltranstransferase [Listeria
monocytogenes FSL J2-071]
Length = 285
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 151/247 (61%), Gaps = 13/247 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP
Sbjct: 22 PA-LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPA 80
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVG 148
+DNDD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G
Sbjct: 81 MDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSG 140
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+EG+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F
Sbjct: 141 AEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIF 200
Query: 209 GKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
+ +G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK
Sbjct: 201 AENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAK 260
Query: 268 QELAYFD 274
L+ D
Sbjct: 261 SALSGHD 267
>gi|422409581|ref|ZP_16486542.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
gi|313608930|gb|EFR84685.1| geranyltranstransferase [Listeria monocytogenes FSL F2-208]
Length = 293
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + +I S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAESKQVTLEELSSIHARKTGELLIFAITSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|422809443|ref|ZP_16857854.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
gi|378753057|gb|EHY63642.1| geranyltranstransferase [Listeria monocytogenes FSL J1-208]
Length = 293
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKQVALEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|217964491|ref|YP_002350169.1| geranyltranstransferase [Listeria monocytogenes HCC23]
gi|386008135|ref|YP_005926413.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|386026735|ref|YP_005947511.1| geranyltranstransferase [Listeria monocytogenes M7]
gi|217333761|gb|ACK39555.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Listeria monocytogenes HCC23]
gi|307570945|emb|CAR84124.1| geranyltranstransferase [Listeria monocytogenes L99]
gi|336023316|gb|AEH92453.1| geranyltranstransferase [Listeria monocytogenes M7]
Length = 293
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|404407800|ref|YP_006690515.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
gi|404241949|emb|CBY63349.1| geranyltranstransferase [Listeria monocytogenes SLCC2376]
Length = 293
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 151/248 (60%), Gaps = 13/248 (5%)
Query: 39 HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
PA L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP
Sbjct: 29 EPA-LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLP 87
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAV 147
+DNDD RRGK +NHKVFG+ATAILA AL LA +A I I+ +
Sbjct: 88 AMDNDDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSS 147
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+EG+ GQ+ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R
Sbjct: 148 GAEGMVGGQLADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRI 207
Query: 208 FGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
F + +G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + A
Sbjct: 208 FAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIA 267
Query: 267 KQELAYFD 274
K L+ D
Sbjct: 268 KSALSGHD 275
>gi|398996325|ref|ZP_10699184.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
gi|398127099|gb|EJM16514.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM21]
Length = 295
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 171/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + +++ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 SALLDPRLNPADAEIRLQMVSALAVAAGPAGMVGGQAIDLGSVGLKLDQTALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E+ ++++ + VG+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELNALQSYAQAVGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A + L FD T A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALRALRPFDAT-AEPLRDLARYIV 291
>gi|399889141|ref|ZP_10775018.1| geranyltranstransferase [Clostridium arbusti SL206]
Length = 289
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/236 (38%), Positives = 146/236 (61%), Gaps = 12/236 (5%)
Query: 43 LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM+YS+ GGKR+ L + EM + + M +A AIE++ T ++I DDLPC+DN
Sbjct: 28 IYEAMKYSVDIGGKRVRPILHCITYEMYDKNYNRVMPIAGAIEMIHTYSLIHDDLPCMDN 87
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRG P+NHKVFG+A A+LA L C + K I+++ G+EG
Sbjct: 88 DDLRRGHPTNHKVFGDALAVLAGDGLLNEAMNIMFDFCTDKGKDELSACKIISNSAGAEG 147
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SEGK++S L+++HR KTG I ASI+SG II G ++ +++++ +FG
Sbjct: 148 MIGGQVVDILSEGKKISYETLSYMHRKKTGALIRASILSGAIIVGASDNDLDKLSSFGSK 207
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+A+Q+ +D++D+ G+ M + D+ DK T+ G++ + KEL E
Sbjct: 208 LGLAFQIKDDVLDIDGNESVMGKPVKSDIDNDKTTFVTTFGLEDCRNKCKELTKEC 263
>gi|392531890|ref|ZP_10279027.1| geranyltranstransferase [Carnobacterium maltaromaticum ATCC 35586]
Length = 293
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 168/289 (58%), Gaps = 17/289 (5%)
Query: 16 VNEYK--ALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+NE+K AL + + + +P L EAM YS+ GGKR+ L +A+ + +GG+
Sbjct: 3 LNEFKSIALPQLEDTLLEELEIGVPTKGSLFEAMTYSVKAGGKRIRPLLLLATIQSLGGN 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A A+E + T ++I DDLP +D+D LRRG+P+NH ++GEA AILA L L
Sbjct: 63 IKSGLLAASALEYIHTYSLIHDDLPAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGF 122
Query: 133 -----------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q + +I A ++ A G+ G+ GQ+ D+ E ++++L++L IH+ KTG
Sbjct: 123 ELLAKSPLTEKQKVRLILA--LSKAAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTG 180
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMM 240
+ ++ + +G +I ++E ++ F ++G+A+Q+ +DI+DVIG+ E+ ++TG D +
Sbjct: 181 ELLKFAAYAGAVIVDADQETETQLVKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAV 240
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K+TYP L+ + G+KK E +A+A+ LA D A L +FI
Sbjct: 241 HQKSTYPGLLTLAGAKKELAEELAKAQTSLANLDNKSVADTQLLEDFIT 289
>gi|189218412|ref|YP_001939053.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
gi|189185270|gb|ACD82455.1| Geranylgeranyl pyrophosphate synthase [Methylacidiphilum infernorum
V4]
Length = 300
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 152/264 (57%), Gaps = 14/264 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P ILHEA+ Y L GGKRL LC+A + + A+ MACA+E + T +++ DDLP
Sbjct: 35 PRILHEAIDYCLFSGGKRLRPILCLAGAHAVCRNSDCALPMACAVECIHTYSLVHDDLPS 94
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA-----------KNINSAV 147
+DNDD RRGKPS HK++GEA AIL AL LA + ++ +
Sbjct: 95 MDNDDFRRGKPSLHKIYGEALAILTGDALLALAFEVASLCSPLGRTYPVSQMIWELARTA 154
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
GS + AGQ+ D+ +EGKE+ L++L +IH KT I S+ G + +++ ++ +
Sbjct: 155 GSRALVAGQVADLEAEGKEIGLTQLRYIHCRKTAALITTSLRLGAMAADADKKTLDLITR 214
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+ +G+A+Q+ +DI+DV + E+ K+ G+D KATYP+++G++ SK+ A +A
Sbjct: 215 YGRALGLAFQIIDDILDVTQTTEILGKSAGKDQKAKKATYPRIMGLEYSKEAAAYYTQKA 274
Query: 267 KQELAYFDPTRAAPLDHLVNFIVS 290
+ + + L L NF+++
Sbjct: 275 LRYASKLGE-KGRLLSDLANFLLT 297
>gi|119897490|ref|YP_932703.1| geranyltranstransferase [Azoarcus sp. BH72]
gi|119669903|emb|CAL93816.1| Geranyltranstransferase [Azoarcus sp. BH72]
Length = 300
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/272 (37%), Positives = 157/272 (57%), Gaps = 22/272 (8%)
Query: 37 LPHPAI----LHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMS-MACAIELLVTMAV 91
LP P I LHEAMRY++ GG + + L + + IGG+Q + +ACA+EL+ ++
Sbjct: 28 LPEPTIAPERLHEAMRYAVLGGGKRVRPLLVHAAGAIGGAQPERLDRIACAVELIHAYSL 87
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------ 145
+ DD+PC+D+D LRRGKP+ H + +ATA+L AL LA Q +A ++ +
Sbjct: 88 VHDDMPCMDDDVLRRGKPTVHVEYDDATALLVGDALQTLAFQVLASAPVTDMPTRQLGMI 147
Query: 146 -----AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
A GS G+A GQ +D+ + G+++ L EL F+H HKTG I S++ G G + E
Sbjct: 148 GLLAMASGSRGMAGGQAIDLAAVGRQLDLRELEFMHIHKTGALIRCSVLLGAQAGTVDGE 207
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHA 259
+ER+ + K G+ +Q+ +DI+D KT G+D DK TY L+G+ +++ A
Sbjct: 208 TLERLDRYAKLTGLLFQVVDDILDAEADTATLGKTAGKDADHDKPTYVSLLGVADARRLA 267
Query: 260 KELIAEAKQELAYFDP--TRAAPLDHLVNFIV 289
++++AEA LA +P RA L L N+IV
Sbjct: 268 QDMLAEA---LAALEPLGARAGHLAALANYIV 296
>gi|402571586|ref|YP_006620929.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
gi|402252783|gb|AFQ43058.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus meridiei
DSM 13257]
Length = 288
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 150/238 (63%), Gaps = 14/238 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YSL GGKR+ L +AS E +GG + A A+EL+ T ++I DDLP +DN
Sbjct: 27 LDESMYYSLIGGGKRIRPVLALASAEAVGGKPESILRAAAALELIHTYSLIHDDLPAMDN 86
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA----------KNINSAVGSEG 151
DD RRG+ +NHK++GEA AILA AL A + +A ++ + + A G +G
Sbjct: 87 DDYRRGRLANHKIYGEAGAILAGDALLTYAFELLASLELGQPERELRIIREVAVASGKDG 146
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ DI +EGK ++L E+ IH+ KTG + S G ++GGG+E++I+ + ++ +
Sbjct: 147 MVRGQVADITAEGKVLTLPEIEEIHKGKTGAILTVSARLGGVLGGGSEDDIQALTDYAQA 206
Query: 212 VGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKK--HAKELIAEA 266
+G+A+Q+ +DI+DVIG E K G D+ + K+TY L+G++G+ + H++ L A+A
Sbjct: 207 LGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEGASEELHSQILKAQA 264
>gi|254852589|ref|ZP_05241937.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300765397|ref|ZP_07075379.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|404280917|ref|YP_006681815.1| geranyltranstransferase [Listeria monocytogenes SLCC2755]
gi|404286782|ref|YP_006693368.1| geranyltranstransferase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405755492|ref|YP_006678956.1| geranyltranstransferase [Listeria monocytogenes SLCC2540]
gi|258605902|gb|EEW18510.1| geranyltranstransferase [Listeria monocytogenes FSL R2-503]
gi|300513834|gb|EFK40899.1| geranyltranstransferase [Listeria monocytogenes FSL N1-017]
gi|404224692|emb|CBY76054.1| geranyltranstransferase [Listeria monocytogenes SLCC2540]
gi|404227552|emb|CBY48957.1| geranyltranstransferase [Listeria monocytogenes SLCC2755]
gi|404245711|emb|CBY03936.1| geranyltranstransferase [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 293
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 150/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKYTNHKVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K+V++ EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKQVTIEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E +A AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVAIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|297797830|ref|XP_002866799.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
gi|297312635|gb|EFH43058.1| hypothetical protein ARALYDRAFT_912293 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 20/226 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN+ LDEA+P+ HPA ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 34 FDLRTYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRASPVMCVAACELFGG 93
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D +RRGKPSNH V+G A+LA AL L
Sbjct: 94 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGIALLAGDALFPLG 153
Query: 132 MQHI------------AIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
HI I++ I VGS G+AAGQ +D+ EG S F+
Sbjct: 154 FHHIVSHTPPELVPRATILRVIAEIARTVGSTGMAAGQYVDL--EGGPFPPS---FVQEK 208
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD 224
K G E S V G ++GG E+E+E +R +G+ VGM YQ +DI +
Sbjct: 209 KFGAMGECSAVCGGLLGGATEDELESLRRYGRAVGMLYQAVDDITE 254
>gi|347753252|ref|YP_004860817.1| polyprenyl synthetase [Bacillus coagulans 36D1]
gi|347585770|gb|AEP02037.1| Polyprenyl synthetase [Bacillus coagulans 36D1]
Length = 289
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 163/264 (61%), Gaps = 13/264 (4%)
Query: 21 ALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
A K+I + L + + L PA+L +AM YSL GGKR+ L +++ +G M
Sbjct: 5 AYDVKEIEKHLAQYIADLRAPAVLKDAMHYSLQAGGKRIRPLLLLSTVSALGKPAGRGMQ 64
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
ACA+E+L T ++I DDLP +D+DDLRRGKP+NHKVFGEA AILA L + + IA
Sbjct: 65 TACAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEAVAILAGDGLLTHSFRLIAED 124
Query: 137 -----IIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI 188
+K K I + G EG+ AGQ+ D+ E K ++L EL +IH HKTGK + S+
Sbjct: 125 PGLDDALKVKLIALLAKSAGPEGMVAGQVADMEGENKTLTLEELQYIHAHKTGKLLRFSV 184
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYP 247
++G +IGG + E++E+ F ++G+A+Q+ +DI+D+ G E + ++ G D R K+TYP
Sbjct: 185 LAGAMIGGASTEQLEKFGQFADHLGLAFQIRDDILDIEGEQEKIGKRVGSDESRHKSTYP 244
Query: 248 KLVGIDGSKKHAKELIAEAKQELA 271
L+ ++G+K+ + AKQ LA
Sbjct: 245 ALLTLEGAKQELRRHTRLAKQCLA 268
>gi|196041614|ref|ZP_03108906.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|229093237|ref|ZP_04224355.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
gi|196027602|gb|EDX66217.1| geranyltranstransferase [Bacillus cereus NVH0597-99]
gi|228690211|gb|EEL44005.1| Geranyltranstransferase [Bacillus cereus Rock3-42]
Length = 296
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 155/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFDKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYGQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKKLTIDELEYIHKHKTGKLLEFAVLAGSILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K E
Sbjct: 207 KLLEFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILDET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|229117675|ref|ZP_04247045.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|423377963|ref|ZP_17355247.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
gi|423547482|ref|ZP_17523840.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|228665767|gb|EEL21239.1| Geranyltranstransferase [Bacillus cereus Rock1-3]
gi|401179203|gb|EJQ86376.1| hypothetical protein IGO_03917 [Bacillus cereus HuB5-5]
gi|401636229|gb|EJS53983.1| hypothetical protein IC9_01316 [Bacillus cereus BAG1O-2]
Length = 296
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q + + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ +E+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F K +G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|95928787|ref|ZP_01311533.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
gi|95135132|gb|EAT16785.1| Twin-arginine translocation pathway signal [Desulfuromonas
acetoxidans DSM 684]
Length = 297
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 172/295 (58%), Gaps = 23/295 (7%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ Y + +++ EAL + +P HP LHEAM YS+ GGKRL L +A+CE +GG
Sbjct: 3 LKNYLTSQRQRVEEALAQTLPPKQQHPTQLHEAMHYSVFAGGKRLRPILMMAACEAVGGD 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ ACA+E++ T ++I DDLP +D+DDLRRG+P+NHKVFGEATAILA AL A
Sbjct: 63 IENVLPAACAMEMIHTYSLIHDDLPAMDDDDLRRGQPTNHKVFGEATAILAGDALLTEAF 122
Query: 133 QHI-AIIKAKNINSAVGSEGI------------AAGQIMDINSEGKEV-SLSELNFIHRH 178
+ A + IN E I GQI+D+ +EG E L+ +++IH H
Sbjct: 123 VVLSAPSDSVQINDRTRREVIQLLARAAGAAGMVGGQIVDMEAEGMEQPDLATVDYIHAH 182
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGR 237
KTG I ASI +G ++GG N E+ E + FGK G+A+Q+ +DI+D+ G E K G
Sbjct: 183 KTGALILASIRAGALLGGANTEQYEALSRFGKLAGLAFQIADDILDITGDQEQLGKDIGS 242
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVS 290
D R KATYP ++G+ S + A EL +Q L +P A PL + ++I++
Sbjct: 243 DQERGKATYPAVLGLSESIRRATEL---HQQALKALEPLADAAEPLRQISHYIIN 294
>gi|229075886|ref|ZP_04208862.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|229098650|ref|ZP_04229590.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|229104806|ref|ZP_04235467.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|423441083|ref|ZP_17417989.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|423448761|ref|ZP_17425640.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|423464157|ref|ZP_17440925.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|423533499|ref|ZP_17509917.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
gi|423541245|ref|ZP_17517636.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|423622735|ref|ZP_17598513.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|228678679|gb|EEL32895.1| Geranyltranstransferase [Bacillus cereus Rock3-28]
gi|228684729|gb|EEL38667.1| Geranyltranstransferase [Bacillus cereus Rock3-29]
gi|228707201|gb|EEL59398.1| Geranyltranstransferase [Bacillus cereus Rock4-18]
gi|401129355|gb|EJQ37038.1| hypothetical protein IEC_03369 [Bacillus cereus BAG5O-1]
gi|401172433|gb|EJQ79654.1| hypothetical protein IGK_03337 [Bacillus cereus HuB4-10]
gi|401260855|gb|EJR67023.1| hypothetical protein IK3_01333 [Bacillus cereus VD148]
gi|402417744|gb|EJV50044.1| hypothetical protein IEA_01413 [Bacillus cereus BAG4X2-1]
gi|402420424|gb|EJV52695.1| hypothetical protein IEK_01344 [Bacillus cereus BAG6O-1]
gi|402463718|gb|EJV95418.1| hypothetical protein IGI_01331 [Bacillus cereus HuB2-9]
Length = 296
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 157/245 (64%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q + + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ +E+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F K +G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|190575335|ref|YP_001973180.1| geranyltranstransferase [Stenotrophomonas maltophilia K279a]
gi|190013257|emb|CAQ46891.1| putative geranyltranstransferase [Stenotrophomonas maltophilia
K279a]
Length = 292
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 151/261 (57%), Gaps = 13/261 (4%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS + G + A +
Sbjct: 13 RIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGTQPESLDAAAMS 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHVAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ +F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELAYF 273
DG+K EL A + LA +
Sbjct: 253 DGAKAQLHELAARMQSILARY 273
>gi|390952210|ref|YP_006415969.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
gi|390428779|gb|AFL75844.1| geranylgeranyl pyrophosphate synthase [Thiocystis violascens DSM
198]
Length = 297
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/294 (39%), Positives = 174/294 (59%), Gaps = 18/294 (6%)
Query: 16 VNEYKALKAKQINEALDEAVP---LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
++ Y+ +++ ALDE +P +P P LHEAMRYS L GGKR+ L A+ E +G
Sbjct: 6 LDTYRTQCQERLERALDELLPRASVP-PLRLHEAMRYSVLGGGKRIRPLLTYATGEALGI 64
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ ACA+E + ++I DDLP +D+DDLRRG+P+ H+ F +ATAILA AL LA
Sbjct: 65 DSALLDRPACAVEFIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDDATAILAGDALQTLA 124
Query: 132 MQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q +A I +++ A GS G+ GQ +D+++EGK + ++ L IH HKTG
Sbjct: 125 FQSLAEATGLDARIRIAMVEHLARASGSRGMVGGQALDLDAEGKALDVAMLEHIHIHKTG 184
Query: 182 KFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
I AS+ G++ G + + ER+ + K +G+A+Q+ +D++DV G KT GRD
Sbjct: 185 ALIRASVQMGILAHGALDADRAERLDRYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQ 244
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DKATYP LVG+ +K+ A +LIAEA + F P A PL + + ++ N
Sbjct: 245 ALDKATYPALVGLAEAKEMAADLIAEALTAIEIF-PDGADPLRWIASALLGRKN 297
>gi|440742834|ref|ZP_20922156.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
gi|440376685|gb|ELQ13348.1| polyprenyl synthetase [Pseudomonas syringae BRIP39023]
Length = 295
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|308069598|ref|YP_003871203.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus polymyxa
E681]
gi|305858877|gb|ADM70665.1| Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)
[Paenibacillus polymyxa E681]
Length = 307
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 166/277 (59%), Gaps = 24/277 (8%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSLP-GGKRLMSTLCIASCE 67
P F EY ++ AL E P PA+L E+M YSL GGKRL L IA+ E
Sbjct: 11 PSF---KEYLTGTTDVVSSALIEQFPADWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAE 67
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
GGS+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA A+LA AL
Sbjct: 68 AFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDAL 127
Query: 128 HCLAMQHIAIIKA---------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSEL 172
L +I++A ++++ G+ G+ GQ+ D++ E + EL
Sbjct: 128 --LTHAFYSIVQAGRRHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIEEL 185
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEM 231
FIH HKT I S+++G IGG ++ ++E +R FG+ +G+A+Q+ +DI+D+IG +M
Sbjct: 186 EFIHLHKTADLIIFSLLAGGRIGGADKSQLEALRRFGRDLGLAFQIQDDILDLIGDESKM 245
Query: 232 REKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+KT D+ ++K TYP +G+D S + +EL A AK+
Sbjct: 246 GKKTQSDVEQEKVTYPYFIGMDASLQQVEELTASAKK 282
>gi|251796322|ref|YP_003011053.1| polyprenyl synthetase [Paenibacillus sp. JDR-2]
gi|247543948|gb|ACT00967.1| Polyprenyl synthetase [Paenibacillus sp. JDR-2]
Length = 302
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 155/264 (58%), Gaps = 20/264 (7%)
Query: 24 AKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA---M 77
A + ++L EA+P P L E+M YSL GGKRL L +A+ E + G + A +
Sbjct: 13 AALVEKSLPEALPAEWNIPPQLRESMLYSLQAGGKRLRPALVLAAAEAVHGQAAAARHAL 72
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ---- 133
+ACAIE + T +++ DDLP +DNDD RRGK +NHKVFGEA AILA AL A
Sbjct: 73 PVACAIEYIHTYSLVHDDLPAMDNDDYRRGKLTNHKVFGEAMAILAGDALLTHAFHLIPK 132
Query: 134 ---------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A+ +++ G+ G+ GQ D+ E S+ EL +IH HKT I
Sbjct: 133 VARLGGISAEVALDIVEDLAMLAGARGMVGGQAADMQGEQGITSIEELEYIHLHKTSDLI 192
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDK 243
S+ +G IGG + E++E +R++G+ +G+A+Q+ +DI+D+IG ++ +KT D+ + K
Sbjct: 193 VFSVTAGGRIGGASAEQLEALRHYGRNIGLAFQIQDDILDLIGDEKKLGKKTNSDVEQQK 252
Query: 244 ATYPKLVGIDGSKKHAKELIAEAK 267
TYP L+GID SK K L EAK
Sbjct: 253 VTYPYLIGIDESKAQVKRLTREAK 276
>gi|402833960|ref|ZP_10882567.1| geranyltranstransferase [Selenomonas sp. CM52]
gi|402279029|gb|EJU28072.1| geranyltranstransferase [Selenomonas sp. CM52]
Length = 295
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 148/259 (57%), Gaps = 13/259 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM YSL GGKRL L +A+ + +G + ++ CAIE++ T ++I DDLP +DN
Sbjct: 34 LEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKAKNINSAVGSEG 151
DD RRGKP+NHKVFG+ A+LA AL LA + + ++ A G G
Sbjct: 94 DDYRRGKPTNHKVFGDGIAVLAGDALLTLAFEVMLRQEGAAPETLVTVVSEMSRAAGPYG 153
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++D+ EG+ + L+ L IH KTG A+I SG I+ G EEE+ + + +
Sbjct: 154 MVGGQVLDLEGEGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAER 213
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+ +DI+DV G + + G D+ +KATY L ++ +KK A++ + EA L
Sbjct: 214 FGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAKKLAEDAVNEAVAAL 273
Query: 271 AYFDPTRAAPLDHLVNFIV 289
F RAA L L F++
Sbjct: 274 DIFGE-RAAFLRDLALFLL 291
>gi|302872147|ref|YP_003840783.1| polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575006|gb|ADL42797.1| Polyprenyl synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 299
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 171/294 (58%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K + E LD+ + P I+++AMRYS+ GGKRL LC+ S +M+ +
Sbjct: 5 KLEEYINLSQKNVEEHLDKILKEKSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDK 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ + +A AIEL+ T ++I DDLP +DND LRRGKP++H VFGEA AILA AL L
Sbjct: 65 EIDRKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTSHVVFGEAIAILAGDALLNL 124
Query: 131 AMQ-----------HIAIIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A + ++K AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCLNWILNYGCEKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G + + + +GK +G+A+Q+ +D++DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDSVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G++ +++ K +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLEEAQQLVKNYSQKAIDVIKKYDNSEL--LIELTNYLIN 296
>gi|46447330|ref|YP_008695.1| farnesyltranstransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400971|emb|CAF24420.1| probable farnesyltranstransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 294
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 160/289 (55%), Gaps = 17/289 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPL---PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
V Y +++ I + LD+ V PH ++ EA RY+L GGKRL L + + + + G
Sbjct: 4 VANYLQTQSQLIEKRLDQLVSKRHGPHQNLI-EAARYALLSGGKRLRPILALTTVQTLHG 62
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
A+S AC +EL+ T ++I DDLPC+DNDD RRGK + H+ + E A+L L A
Sbjct: 63 DIQEALSPACTLELIHTYSLIHDDLPCMDNDDYRRGKLTVHRQYSEGHAVLTGDFLLTYA 122
Query: 132 MQHIAIIKAKNINSAV----------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A K V G +G+ GQ +D+ SEG++++L L +HR+KT
Sbjct: 123 FELLATDKYLTSEKKVKLITILSRQSGYDGMIGGQALDLASEGQKINLETLRLLHRNKTA 182
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMR-EKTGRDMM 240
I AS+ G I+ EE++ +R FG+ +G+A+Q+ +DI+D+ S K G D++
Sbjct: 183 ALITASVEFGGILANATEEQLAHIREFGENIGLAFQITDDILDITSSEAKHGRKIGSDIL 242
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DK+TY L+GI+ +K +A +A L P + L HL +FI+
Sbjct: 243 KDKSTYVSLLGIEQAKAYALNFYQKAINALKLL-PYDNSFLIHLADFII 290
>gi|292492812|ref|YP_003528251.1| polyprenyl synthetase [Nitrosococcus halophilus Nc4]
gi|291581407|gb|ADE15864.1| Polyprenyl synthetase [Nitrosococcus halophilus Nc4]
Length = 296
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 167/293 (56%), Gaps = 34/293 (11%)
Query: 21 ALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAM 77
AL+A+ AL++ +P P LHEAMRY+ L GGKRL L ++ +G S++V
Sbjct: 10 ALQAR-TERALEQVLPPADKPPKRLHEAMRYAVLGGGKRLRPLLVYSTGMALGASEAVLD 68
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI 137
+ A A+EL+ +++ DDLP +DNDDLRRG+P+ HK F EATA+L AL LA + +A
Sbjct: 69 APASAVELIHAYSLVHDDLPSMDNDDLRRGRPTCHKAFDEATALLVGDALQSLAFRILAD 128
Query: 138 ----IKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
+ A N + A S G+A GQ +D+ S G+ ++L+EL +HR KTG I A
Sbjct: 129 STSGLPASNQIKMLMLLAEAASSRGMAGGQAIDLESVGQLLTLAELETMHRLKTGALIRA 188
Query: 187 SIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDV------IGSPEMREKTGRDM 239
S++ G + +E + F + +G+A+Q+ +D++DV +G P+ G D
Sbjct: 189 SVLLGAWCHPTIDPHTLENLDRFAQCIGLAFQIQDDVLDVESDTATLGKPQ-----GSDR 243
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDH---LVNFIV 289
RDK TYP L+G+ +K A+ L+ +A Q L D AP +H L +F+V
Sbjct: 244 ARDKPTYPSLLGLPQAKAKAQSLLEQAHQALRAVD----APTEHLEWLADFVV 292
>gi|332686260|ref|YP_004456034.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius ATCC
35311]
gi|332370269|dbj|BAK21225.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase (farnesyldiphosphate synthase)/
geranylgeranyl pyrophosphate synthetase [Melissococcus
plutonius ATCC 35311]
Length = 296
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 146/241 (60%), Gaps = 20/241 (8%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIAS-----CEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
L +AM YS+ GGKRL L +A+ C + G A A A+E+L T ++I DDL
Sbjct: 32 LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIEQG----AYQTAAALEMLHTYSLIHDDL 87
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAV 147
P +DNDDLRRGKP+NHK+FGEA AILA L A Q +A I+ + +
Sbjct: 88 PAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQLLALSTIEAGKKILLTQLLGQTA 147
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+EG+ AGQ D+ E K ++L EL+ +HR KTG IE S ++G I+ +EE I ++
Sbjct: 148 GTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGALIEFSFMAGGILANQSEEIIYLLKQ 207
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMR-EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
G+A+Q+ +D++DVIGS E + +K GRD +K+TYP L+GI+ +K+ + +A A
Sbjct: 208 LANAFGLAFQIRDDLLDVIGSEEKQGKKIGRDQCLNKSTYPALLGIEKAKEALTQQVANA 267
Query: 267 K 267
K
Sbjct: 268 K 268
>gi|424065783|ref|ZP_17803257.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408002992|gb|EKG43211.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 295
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 171/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G +++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQQRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|408823038|ref|ZP_11207928.1| geranyltranstransferase [Pseudomonas geniculata N1]
gi|424669648|ref|ZP_18106673.1| hypothetical protein A1OC_03262 [Stenotrophomonas maltophilia
Ab55555]
gi|401071719|gb|EJP80230.1| hypothetical protein A1OC_03262 [Stenotrophomonas maltophilia
Ab55555]
Length = 292
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 151/261 (57%), Gaps = 13/261 (4%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS + G + A +
Sbjct: 13 RIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPESLDAAAMS 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQTLAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ +F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELAYF 273
DG+K EL A + LA +
Sbjct: 253 DGAKAQLHELAARMQSILAGY 273
>gi|386043674|ref|YP_005962479.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404410661|ref|YP_006696249.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404413439|ref|YP_006699026.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
gi|345536908|gb|AEO06348.1| geranyltranstransferase [Listeria monocytogenes 10403S]
gi|404230487|emb|CBY51891.1| geranyltranstransferase [Listeria monocytogenes SLCC5850]
gi|404239138|emb|CBY60539.1| geranyltranstransferase [Listeria monocytogenes SLCC7179]
Length = 293
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|414084354|ref|YP_006993062.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
gi|412997938|emb|CCO11747.1| farnesyl diphosphate synthase [Carnobacterium maltaromaticum LMA28]
Length = 293
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/289 (34%), Positives = 168/289 (58%), Gaps = 17/289 (5%)
Query: 16 VNEYK--ALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+NE+K AL + + + +P L EAM YS+ GGKR+ L +A+ + +GG+
Sbjct: 3 LNEFKSIALPQLEDTLLEELEIGVPTKGSLFEAMTYSVKAGGKRIRPLLLLATIQSLGGN 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A A+E + T ++I DDLP +D+D LRRG+P+NH ++GEA AILA L L
Sbjct: 63 IKSGLLAASALEYIHTYSLIHDDLPAMDDDALRRGQPTNHIIYGEALAILAGDGLLTLGF 122
Query: 133 -----------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q + +I A ++ A G+ G+ GQ+ D+ E ++++L++L IH+ KTG
Sbjct: 123 ELLAKSPLTEKQKVRLILA--LSKAAGANGMVVGQVSDMEGESQKLTLTDLQNIHKKKTG 180
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMM 240
+ ++ + +G +I ++E ++ F ++G+A+Q+ +DI+DVIG+ E+ ++TG D +
Sbjct: 181 ELLKFAAYAGAVIVDADQETETQLVKFASHLGLAFQIRDDILDVIGTTAELGKETGMDAV 240
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K+TYP L+ + G+KK E +A+A+ LA D A L +FI
Sbjct: 241 HQKSTYPGLLTLAGAKKELAEELAKAQTSLANVDNKSVADTQLLEDFIT 289
>gi|315282228|ref|ZP_07870682.1| geranyltranstransferase [Listeria marthii FSL S4-120]
gi|313614130|gb|EFR87820.1| geranyltranstransferase [Listeria marthii FSL S4-120]
Length = 293
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 149/244 (61%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALNADPLLGVRTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHK+FG+ATAILA AL LA +A + K I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKIFGDATAILAGDALLTLAFSILAEDENLSFETRLALIKEISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ D+ +E K+V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQQADMEAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADSEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E ++ AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHMSIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|422639114|ref|ZP_16702544.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
gi|330951508|gb|EGH51768.1| polyprenyl synthetase [Pseudomonas syringae Cit 7]
Length = 295
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDALFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAGLEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|289672640|ref|ZP_06493530.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 295
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|256828745|ref|YP_003157473.1| polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256577921|gb|ACU89057.1| Polyprenyl synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 160/261 (61%), Gaps = 11/261 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L +M YSL GGKRL LC+A E+ GGS + ACAIE + T ++I DDLP
Sbjct: 31 PSPLVASMEYSLMAGGKRLRPVLCLAWAELAGGSVHAVLDFACAIECIHTYSLIHDDLPA 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQAL--------HCLAMQHIAIIKAK-NINSAVGS 149
+D+DDLRRGKPSNHK F EATAILA L L ++ I+KA ++++A G
Sbjct: 91 MDDDDLRRGKPSNHKRFDEATAILAGDGLLTEAFTLASSLELRPERILKAVFHLSTAAGP 150
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ GQ++D+ GK SL +L +H KTG IE S V+G ++GGG++ E + +G
Sbjct: 151 RGMVGGQVLDMGLTGKSASLPQLREMHAKKTGALIETSCVTGCVLGGGDDSEQAKASEYG 210
Query: 210 KYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+A+Q+ +DI+DVIG + + G D+ + K+TYP L+GID S+ A++ + +A
Sbjct: 211 RAIGLAFQVTDDILDVIGDEAALGKPVGSDVAQGKSTYPALLGIDQSRVLARQSVDQALA 270
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
LA F RA L + +I+
Sbjct: 271 ALAGFSHPRADFLRAVALYIL 291
>gi|260887337|ref|ZP_05898600.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|330838910|ref|YP_004413490.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
gi|260862973|gb|EEX77473.1| geranyltranstransferase [Selenomonas sputigena ATCC 35185]
gi|329746674|gb|AEC00031.1| Polyprenyl synthetase [Selenomonas sputigena ATCC 35185]
Length = 295
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 148/259 (57%), Gaps = 13/259 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM YSL GGKRL L +A+ + +G + ++ CAIE++ T ++I DDLP +DN
Sbjct: 34 LEKAMEYSLMAGGKRLRPVLLMAAADAVGKDGAAFLTTGCAIEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKAKNINSAVGSEG 151
DD RRGKP+NHKVFG+ A+LA AL LA + + ++ A G G
Sbjct: 94 DDYRRGKPTNHKVFGDGIAVLAGDALLTLAFEVMLRQEGAAPETLVTVVSEMSRAAGPYG 153
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++D+ EG+ + L+ L IH KTG A+I SG I+ G EEE+ + + +
Sbjct: 154 MVGGQVLDLEGEGRRLDLAALRKIHMGKTGALFCAAIRSGAILAGAKEEELAALTLYAER 213
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+ +DI+DV G + + G D+ +KATY L ++ +KK A++ + EA L
Sbjct: 214 FGLAFQITDDILDVTGDEAAIGKPVGSDVRNEKATYVTLTSLEEAKKLAEDAVDEAVVAL 273
Query: 271 AYFDPTRAAPLDHLVNFIV 289
F RAA L L F++
Sbjct: 274 DIFGE-RAAFLRDLALFLL 291
>gi|388496908|gb|AFK36520.1| unknown [Medicago truncatula]
Length = 342
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 163/301 (54%), Gaps = 32/301 (10%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y QIN+ LDEA+ + P ++EAMRYS G KR +CI++CE+ GG
Sbjct: 48 FDLKTYWTSLMTQINQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGG 107
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
S+ A ACA+E++ ++I DDLPC+D+ RRG+PSNH ++G AILA AL L
Sbjct: 108 SRLAAFPTACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLG 167
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
QHI +++ I VGS G+AAGQ +D+ V L I
Sbjct: 168 FQHIVSHTPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDK 222
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM---REKT 235
K G+ E S V G ++ G ++EIER+R +G+ VG+ Y + +DI++ PE RE +
Sbjct: 223 KFGEMAECSAVCGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILEERLKPEGDKDRENS 282
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFGN 293
G+ +Y ++ G++ + + A+EL A+A +EL F+ + PL VN+ +
Sbjct: 283 GK-------SYVEVYGVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDRSF 335
Query: 294 N 294
N
Sbjct: 336 N 336
>gi|423395520|ref|ZP_17372721.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|423406396|ref|ZP_17383545.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
gi|401654931|gb|EJS72470.1| hypothetical protein ICU_01214 [Bacillus cereus BAG2X1-1]
gi|401660390|gb|EJS77872.1| hypothetical protein ICY_01081 [Bacillus cereus BAG2X1-3]
Length = 296
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 155/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T ++I DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYDQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK +++ EL +IH+HKTGK +E ++++G I+ EE+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKRLTIDELEYIHKHKTGKLLEYAVLAGAILSDATEEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F K +G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 QLLVFAKNIGLAFQIRDDILDVEGNEEEIGKPIGSDVSNEKSTYTTLFTVDRAKAILEET 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|257482376|ref|ZP_05636417.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|422594221|ref|ZP_16668512.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|422680447|ref|ZP_16738719.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
gi|298160570|gb|EFI01592.1| geranyltranstransferase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|330984529|gb|EGH82632.1| geranyltranstransferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009793|gb|EGH89849.1| geranyltranstransferase [Pseudomonas syringae pv. tabaci str. ATCC
11528]
Length = 295
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 172/291 (59%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A + + +N+ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIV 291
>gi|47095946|ref|ZP_00233549.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|254912037|ref|ZP_05262049.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|254936364|ref|ZP_05268061.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|386047015|ref|YP_005965347.1| geranyltranstransferase [Listeria monocytogenes J0161]
gi|47015692|gb|EAL06622.1| geranyltranstransferase [Listeria monocytogenes str. 1/2a F6854]
gi|258608955|gb|EEW21563.1| geranyltranstransferase [Listeria monocytogenes F6900]
gi|293590003|gb|EFF98337.1| geranyltranstransferase [Listeria monocytogenes J2818]
gi|345534006|gb|AEO03447.1| geranyltranstransferase [Listeria monocytogenes J0161]
Length = 293
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 148/244 (60%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKVFG+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDDNLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ+ D+ +E K V+L EL+ IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQLADMEAENKHVTLEELSSIHARKTGELLIYAVTSAAKIAEADLEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E + AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAKRALNEHVTIAKSAL 271
Query: 271 AYFD 274
+ D
Sbjct: 272 SGHD 275
>gi|304436640|ref|ZP_07396609.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304370336|gb|EFM23992.1| geranyltranstransferase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 291
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/261 (36%), Positives = 156/261 (59%), Gaps = 17/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM YSL GGKRL L +A+ + +GG + +S+ACA+E++ T ++I DDLP +DN
Sbjct: 30 LRQAMAYSLMAGGKRLRPVLLMAAADAVGGDGAKFLSVACALEMIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AVGS 149
DD RRGK +NHKVFG+ AILA L LA I++ +++++ A G+
Sbjct: 90 DDYRRGKLTNHKVFGDGIAILAGDGLLTLAF--TVILRQQDVSADTLLRVVDEISRAAGA 147
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E +S+ E+ +H KTG A++ SG I+GG +E ++ + +
Sbjct: 148 EGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLASLTTYA 207
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DV+G+ E + + G D K+TY L +D +++ A + + +A
Sbjct: 208 EQFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVSLTSLDEAQELAAQTVKDACA 267
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L F A L LV+++V
Sbjct: 268 ALRDF-GAEADFLRELVSYLV 287
>gi|398977331|ref|ZP_10687048.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
gi|398138075|gb|EJM27105.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM25]
Length = 295
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 168/295 (56%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEA--VPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + + + A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAERDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|390453366|ref|ZP_10238894.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus peoriae KCTC
3763]
Length = 307
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 168/279 (60%), Gaps = 24/279 (8%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSLP-GGKRLMSTLCIASCE 67
P F EY A ++ AL E P PA+L E+M YSL GGKRL L IA+ E
Sbjct: 11 PSF---KEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAE 67
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
GGS+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA AILA AL
Sbjct: 68 AFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDAL 127
Query: 128 HCLAMQHIAIIKA---------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSEL 172
L ++++A + ++ G+ G+ GQ+ D++ E + EL
Sbjct: 128 --LTHAFYSVVQAGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEEL 185
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEM 231
+IH HKT I S+++G IGG N+ ++E +R FG+ +G+A+Q+ +DI+D+IG +M
Sbjct: 186 EYIHLHKTADLIIFSLLAGGRIGGANKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKM 245
Query: 232 REKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+KT D+ ++K TYP +G++ S++ ++L A AK+ L
Sbjct: 246 GKKTQSDVEQEKVTYPFFIGMEASQQQVEKLTATAKKAL 284
>gi|164605014|dbj|BAF98303.1| geranylgeranyl-diphosphate synthase [Hevea brasiliensis]
Length = 306
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/296 (34%), Positives = 165/296 (55%), Gaps = 25/296 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPG--GKRLMSTLCIASCEMIGG 71
F + Y +IN+ LD+A+P+ +P ++EAMRYS+ KR +CIA+CE+ GG
Sbjct: 12 FDLKTYWMTLISEINQKLDQAIPIQYPEEIYEAMRYSVLAKRTKRAPPVMCIAACELFGG 71
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ A ACA+E++ ++I DDLPC+D+ RRG+PSNH V+G AILA AL L
Sbjct: 72 NRLAAFPTACALEMVHAASLIHDDLPCMDDAPSRRGQPSNHAVYGVDKAILAGDALFPLG 131
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI + I AVGS G+AAGQ +D+ E SL+ F+
Sbjct: 132 FRHIVSNTPSDLVPEPRLLRVIAEIARAVGSTGMAAGQFLDL-----EGSLNSAEFVQEK 186
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G ++ G ++EI+R+R +G+ VG+ Y++ +D+++ + M ++ +
Sbjct: 187 KYGEMGECSAVCGGLLAGAEDDEIQRLRRYGRAVGVLYKVIDDVLE---AKSMSKEDEEN 243
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFG 292
+ +Y L G++ + + A+EL +AK+EL F+ PL + V++ G
Sbjct: 244 EKKKAKSYVSLYGVEKAVEVAEELRTKAKKELDGFEKYGESVQPLYNFVDYAADRG 299
>gi|260914110|ref|ZP_05920583.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
gi|260631743|gb|EEX49921.1| geranyltranstransferase [Pasteurella dagmatis ATCC 43325]
Length = 306
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 167/293 (56%), Gaps = 27/293 (9%)
Query: 15 QVNE-YKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
QV E A A+Q+N L+ A P P I EAMRY L GGKR+ L A+ M+G
Sbjct: 21 QVQERINAFLAQQLN--LNTA---PSPLI--EAMRYGVLLGGKRIRPFLVYATGRMLGAD 73
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A +E + ++I DDLP +DND LRRG+P+ H F EATAILA AL A
Sbjct: 74 LIQLDYAAAGLEAIHAYSLIHDDLPAMDNDSLRRGQPTCHIAFDEATAILAGDALQAFAF 133
Query: 133 ------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q +A++ + A G++G+ GQ +D+ SE K++SL+EL IHR+KT
Sbjct: 134 EILTQAPALSAEQKLALV--STLAQASGAKGMCLGQSLDLISEQKQISLAELEQIHRNKT 191
Query: 181 GKFIEASIVSGVIIGG--GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
G + A++ G I G++ ++++ + + +G+A+Q+ +DI+D+ G E+ KT G
Sbjct: 192 GALLTAALQLGFICSPHFGDKTLAQQLQRYSRAIGLAFQVQDDILDIEGESEVLGKTVGS 251
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
D+M DK+TYPKL+G+DG+K+ A+EL EA L P L + F+V+
Sbjct: 252 DLMADKSTYPKLLGLDGAKQKAQELYREAISTLDEL-PFDTQALRAITEFVVN 303
>gi|407706706|ref|YP_006830291.1| hypothetical protein MC28_3470 [Bacillus thuringiensis MC28]
gi|407384391|gb|AFU14892.1| Geranyltranstransferase [Bacillus thuringiensis MC28]
Length = 296
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q + + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQIVMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EGK++++ EL +IH+HKTGK +E ++++G I+ +E+ E
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGKQLTIDELEYIHKHKTGKLLEFAVLAGAILSNATKEQEE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F K +G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K +E
Sbjct: 207 KLLEFAKNIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKNILEET 266
Query: 263 IAEAK 267
I +AK
Sbjct: 267 ITKAK 271
>gi|108805545|ref|YP_645482.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108766788|gb|ABG05670.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 156/289 (53%), Gaps = 19/289 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
V + AL+ + I E L+ PA+ L EAMRYSL GGKR+ LC+ S + G
Sbjct: 9 VEGFLALR-EVIEEYLEGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESASLFGAP 67
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL--HCL 130
+ A AIEL+ T ++I DDLP +DNDD RRGKP++HK FGEA AILA A L
Sbjct: 68 PERVLPSAAAIELIHTFSLIHDDLPAMDNDDFRRGKPTSHKKFGEAMAILAGDAFFGESL 127
Query: 131 AM----------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A+ Q +A++ + + A G G+A GQ +D+ G+ EL H HKT
Sbjct: 128 ALITDHQEGSAEQVLAVV--RELAHATGLAGLAGGQALDLEHTGRRAGPKELELTHHHKT 185
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
G I AS G I+ G EE +E + + +G+ +Q+ +D++D +GS E + ++ G D
Sbjct: 186 GALIRASARIGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDA 245
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
R KAT+ + G++G+++ A A + L + + L+ L F+
Sbjct: 246 ERGKATFVSVFGLEGARREADAACERALRALGRLEGRDTSRLEALALFV 294
>gi|333985123|ref|YP_004514333.1| geranyltranstransferase [Methylomonas methanica MC09]
gi|333809164|gb|AEG01834.1| Geranyltranstransferase [Methylomonas methanica MC09]
Length = 297
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/265 (38%), Positives = 156/265 (58%), Gaps = 17/265 (6%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++ ALD +P + P LH+AMRY+ L GGKR L A+ + +G ++ V ACA
Sbjct: 14 RVERALDARLPGENILPQTLHQAMRYTVLDGGKRTRPLLVYATGQALGLNEDVLDGPACA 73
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----I 137
+E + ++I DDLP +DNDDLRRGKP+ HK F EATAILA AL LA + +A +
Sbjct: 74 VEFIHVYSLIHDDLPAMDNDDLRRGKPTCHKAFDEATAILAGDALQALAFEVLANDPSIL 133
Query: 138 IKA-------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ A N+ A GS+G+ GQ +D+ S G +++L EL +H HKTG I AS+
Sbjct: 134 VDAGARLKMIGNLTKASGSQGMVGGQAIDLASVGTQLNLPELENMHIHKTGALIRASVNM 193
Query: 191 GVIIGGGNEEEIER-MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
+ + + + + ++ K +G+++Q+ +DI+DV KT G+D+ DK TYP
Sbjct: 194 AALSKPDLDPAVAKNLDHYAKCIGLSFQVKDDILDVESDTATLGKTQGKDVDNDKPTYPA 253
Query: 249 LVGIDGSKKHAKELIAEAKQELAYF 273
L+G+ G+K+ A+EL +A LA F
Sbjct: 254 LLGMAGAKEKARELHEQAVASLAGF 278
>gi|77461227|ref|YP_350734.1| farnesyl-diphosphate synthase [Pseudomonas fluorescens Pf0-1]
gi|77385230|gb|ABA76743.1| geranyltranstransferase [Pseudomonas fluorescens Pf0-1]
Length = 295
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 168/295 (56%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEA--VPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + + + A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSDLSADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGCAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|422343993|ref|ZP_16424920.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
gi|355377741|gb|EHG24950.1| hypothetical protein HMPREF9432_00980 [Selenomonas noxia F0398]
Length = 291
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 159/262 (60%), Gaps = 17/262 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAM YSL GGKRL L +A+ + +G + ++ ACA+E++ T ++I DDLP +DN
Sbjct: 30 LREAMEYSLMAGGKRLRPILLMAAADAVGADGTKLLTAACALEMIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN------------INSAVGS 149
DD RRGK +NHKV+G+ AILA AL LA +++ K+ I+ A G+
Sbjct: 90 DDYRRGKLTNHKVYGDGIAILAGDALLTLAF--TVLLRQKDVPAASLLRVVDVISRAAGA 147
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E K +SL EL +H KTG A++ SG I+GG +E+++ + +
Sbjct: 148 EGMVGGQVLDLQAENKAISLDELRRVHMGKTGALFHAALRSGAILGGASEQQLAALTAYA 207
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DV+G+ E + + G D K+TY L + +++ A+ + EA
Sbjct: 208 DHFGLAFQITDDILDVVGNAEDIGKPVGSDEKNHKSTYVTLTSLSAAQELAQRTVDEALA 267
Query: 269 ELAYFDPTRAAPLDHLVNFIVS 290
LA F + A+ L LV+++V+
Sbjct: 268 ALAVF-GSEASFLRELVSYLVN 288
>gi|422651839|ref|ZP_16714630.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964913|gb|EGH65173.1| geranyltranstransferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 295
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQPPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKGYALELRDQALAALSLFDAA-AEPLRELARYIV 291
>gi|228998970|ref|ZP_04158552.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
gi|229006508|ref|ZP_04164153.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228754742|gb|EEM04142.1| Geranyltranstransferase [Bacillus mycoides Rock1-4]
gi|228760587|gb|EEM09551.1| Geranyltranstransferase [Bacillus mycoides Rock3-17]
Length = 297
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 155/246 (63%), Gaps = 14/246 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P +L EAM YSL GGKRL L A+ + + + + ACA+E++ T ++I DDLPC
Sbjct: 31 PNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------A 146
+D+DDLRRGKP+NHKVFGEA A+LA L A Q + ++I++ A
Sbjct: 91 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALELAKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G EG+ AGQ+ D+ +EGK + LSEL +IH+HKTG+ +E ++++G ++ G E+ +++
Sbjct: 151 AGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQEKKLL 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L ID +K +E I +
Sbjct: 211 AFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEAKCILEETIVK 270
Query: 266 AKQELA 271
AK +A
Sbjct: 271 AKDAIA 276
>gi|379727704|ref|YP_005319889.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius DAT561]
gi|376318607|dbj|BAL62394.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Melissococcus plutonius DAT561]
Length = 296
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 146/241 (60%), Gaps = 20/241 (8%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIAS-----CEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
L +AM YS+ GGKRL L +A+ C + G A A A+E+L T ++I DDL
Sbjct: 32 LKKAMLYSIQAGGKRLRPLLLLATINSFNCPIEQG----AYQTAAALEMLHTYSLIHDDL 87
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAV 147
P +DNDDLRRGKP+NHK+FGEA AILA L A Q +A I+ + +
Sbjct: 88 PAMDNDDLRRGKPTNHKIFGEALAILAGDGLLTGAFQLLALSTIEADKKILLTQLLGQTA 147
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+EG+ AGQ D+ E K ++L EL+ +HR KTG IE S ++G I+ +EE I ++
Sbjct: 148 GTEGMVAGQSGDLQGEKKALNLQELSEVHRKKTGALIEFSFMAGGILANQSEEIICLLKQ 207
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMR-EKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
G+A+Q+ +D++DVIGS E + +K GRD +K+TYP L+GI+ +K+ + +A A
Sbjct: 208 LANAFGLAFQIRDDLLDVIGSEEKQGKKIGRDQCLNKSTYPALLGIEKAKEALTQQVANA 267
Query: 267 K 267
K
Sbjct: 268 K 268
>gi|374603540|ref|ZP_09676518.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
gi|374390842|gb|EHQ62186.1| polyprenyl synthetase [Paenibacillus dendritiformis C454]
Length = 304
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 147/266 (55%), Gaps = 19/266 (7%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L E+M YSL GGKRL + +CE + G A +ACAIE++ T +++ DDLP
Sbjct: 36 PAELKESMLYSLMAGGKRLRPLCVVIACESLNGPLEAADPVACAIEMIHTYSLVHDDLPA 95
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQAL--HCL------AMQH-----IAIIKAKNINS 145
+DNDD RRGKP+NHKVFGEA AILA AL H A +H IA+ + ++
Sbjct: 96 MDNDDYRRGKPTNHKVFGEALAILAGDALLTHAFYTVAQCARRHGISAEIALTITEELSV 155
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
G G+ GQ D+ E +L +L +IH HKT I ++ +G + G NE ++ +
Sbjct: 156 YAGMRGMVGGQTADMLGEQGLTTLDQLEYIHLHKTSDLIVFALRAGAHLAGANEAQLNAL 215
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
FG +G+A+Q+ +DI+D+ G + K G D K TYP +G++ SK+ L
Sbjct: 216 TEFGTKLGLAFQIQDDILDITGEEGLLGKPKGSDEKSGKVTYPYFIGLEASKQEVVRLTE 275
Query: 265 EAKQ---ELAYFDPTRAAPL-DHLVN 286
EAKQ E + P R L D+L+
Sbjct: 276 EAKQAVREAGFPYPARLYELADYLLE 301
>gi|228992926|ref|ZP_04152850.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
gi|228766783|gb|EEM15422.1| Geranyltranstransferase [Bacillus pseudomycoides DSM 12442]
Length = 297
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 155/246 (63%), Gaps = 14/246 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P +L EAM YSL GGKRL L A+ + + + + ACA+E++ T ++I DDLPC
Sbjct: 31 PNVLREAMTYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------A 146
+D+DDLRRGKP+NHKVFGEA A+LA L A Q + ++I++ A
Sbjct: 91 MDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTHAFQVVTAYHHQDISTETKLRLALELAKA 150
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G EG+ AGQ+ D+ +EGK + LSEL +IH+HKTG+ +E ++++G ++ G E+ +++
Sbjct: 151 AGPEGMVAGQVADMEAEGKRLELSELEYIHKHKTGRLLEYAVLAGAVLAGATPEQEKKLL 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L ID +K +E I +
Sbjct: 211 AFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEAKCILEETIVK 270
Query: 266 AKQELA 271
AK +A
Sbjct: 271 AKDAIA 276
>gi|229163124|ref|ZP_04291080.1| Geranyltranstransferase [Bacillus cereus R309803]
gi|228620530|gb|EEK77400.1| Geranyltranstransferase [Bacillus cereus R309803]
Length = 296
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 156/245 (63%), Gaps = 14/245 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + G +++ + ACA+E++ T +++ DD
Sbjct: 27 LQCPNVLREAMAYSLEAGGKRLRPLLLFATLQAFGKERNLGVGAACALEMIHTYSLVHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q I + K I++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQVIMAYEQKEISAEKKVRLVLEL 146
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ+ D+ +EG+ +++ EL +IH+HKTGK +E ++++G I+ EE+ +
Sbjct: 147 AKAAGPEGMVGGQVADMEAEGELLTIDELEYIHKHKTGKLLEFAVLAGAILSDATEEQEK 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ F KY+G+A+Q+ +DI+DV G+ E+ + G D+ +K+TY L +D +K ++
Sbjct: 207 NLLTFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDVSNEKSTYTTLFTVDRAKDILEDT 266
Query: 263 IAEAK 267
IA+AK
Sbjct: 267 IAKAK 271
>gi|110802213|ref|YP_699103.1| geranyltranstransferase [Clostridium perfringens SM101]
gi|110682714|gb|ABG86084.1| geranyltranstransferase [Clostridium perfringens SM101]
Length = 290
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 151/232 (65%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSVNVGGKRIRPILMLLSYYIYKSDYKKILTPAIAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIKA-KNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM + I+ +KA K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGISALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG I+ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAILAEASERDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|66043872|ref|YP_233713.1| polyprenyl synthetase [Pseudomonas syringae pv. syringae B728a]
gi|422673861|ref|ZP_16733218.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
gi|63254579|gb|AAY35675.1| farnesyl-diphosphate synthase [Pseudomonas syringae pv. syringae
B728a]
gi|330971592|gb|EGH71658.1| polyprenyl synthetase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 295
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|289623775|ref|ZP_06456729.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289646544|ref|ZP_06477887.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422581075|ref|ZP_16656219.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330865926|gb|EGH00635.1| geranyltranstransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 172/291 (59%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A + + +N+ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSPFDAA-AEPLRELARYIV 291
>gi|422630479|ref|ZP_16695676.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
gi|330939927|gb|EGH43133.1| polyprenyl synthetase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 295
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLTPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|289423135|ref|ZP_06424950.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
gi|289156466|gb|EFD05116.1| geranyltranstransferase [Peptostreptococcus anaerobius 653-L]
Length = 295
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 157/264 (59%), Gaps = 15/264 (5%)
Query: 39 HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ + EAM YSL GGKRL L + + ++ G + + A+E++ T ++I DDLP
Sbjct: 28 YQKTIFEAMNYSLRAGGKRLRPILLMEAYKLCQGQGEDFVPYSVAMEMIHTYSLIHDDLP 87
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKNINS 145
LDNDDLRRGKP+NH VFGEA AILA AL A + I++ A I+
Sbjct: 88 ALDNDDLRRGKPTNHIVFGEAMAILAGDALLNTAYETMLNAAFKHSRPEISLRAAYEISR 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
G G+ GQ++D+ SE K++ +L++IH +KT I S+ +G I+ G +E+ +E +
Sbjct: 148 GAGIYGMIGGQVVDVESEDKKIDKDKLDYIHMNKTAAMIVGSVRAGAILAGIDEDRLESL 207
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMR-EKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+ + +G+A+Q+ +DI+D+ G ++ ++ G D+ DK+TYP L+GID SKK + LI
Sbjct: 208 TKYAENIGLAFQIVDDILDIEGDEKLLGKRVGSDLDNDKSTYPSLLGIDASKKIVENLIE 267
Query: 265 EAKQELAYFDPTRAAPLDHLVNFI 288
EAK L F + A ++ L +FI
Sbjct: 268 EAKTSLEVF-ASDAEFMNALADFI 290
>gi|71737604|ref|YP_272900.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558157|gb|AAZ37368.1| geranyltranstransferase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 295
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 172/291 (59%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A +CA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGASCAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A + + +N+ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIV 291
>gi|393200428|ref|YP_006462270.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
gi|327439759|dbj|BAK16124.1| geranylgeranyl pyrophosphate synthase [Solibacillus silvestris
StLB046]
Length = 294
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 152/246 (61%), Gaps = 15/246 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L E+M YSL GGKR+ +A CEM S + ++ A+E++ T ++I DDLP
Sbjct: 30 PAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPS 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI---------IKAKNINS-AVG 148
+D+D+LRRGKP+NH V+GEA A LA AL+ LA IA I+ N+ S A G
Sbjct: 90 MDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIARLNNLSAEKRIELVNLLSVAAG 149
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+EG+ GQ++D++ E + ++L EL +H +KTG + SI +G ++ + + E + +
Sbjct: 150 TEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREALVEY 209
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAK---ELIA 264
++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ ++G+K+ EL
Sbjct: 210 AHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHYELAI 269
Query: 265 EAKQEL 270
EA Q++
Sbjct: 270 EALQKI 275
>gi|424070488|ref|ZP_17807923.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408000494|gb|EKG40847.1| geranyltranstransferase [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 295
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLALYIV 291
>gi|254442247|ref|ZP_05055723.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
gi|198256555|gb|EDY80863.1| polyprenyl synthetase superfamily [Verrucomicrobiae bacterium
DG1235]
Length = 292
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/257 (41%), Positives = 149/257 (57%), Gaps = 15/257 (5%)
Query: 26 QINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I A+D+ +P P+ +HEAM YS+ GGKRL L +AS E+ S+ AM A A
Sbjct: 13 EIESAVDQYLPAEATRPSRIHEAMLYSMRAGGKRLRPVLVLASKELFD-SELDAMPAAIA 71
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK- 141
+E L T ++I DDLP +D+ DLRRGKP++HK F EATA+LA AL A Q +A A
Sbjct: 72 VECLHTYSLIHDDLPSIDDGDLRRGKPTSHKQFDEATAVLAGDALLAYAFQLLARHFANA 131
Query: 142 ---------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+ GSE + GQ+ DI EG +S LNFIH +KT IE +V G
Sbjct: 132 PDVCANLVGELGETAGSERLIGGQMEDILGEGGPLSEDTLNFIHLNKTSALIECCLVMGG 191
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVG 251
IIGG N E+I+ +R +G+ +G+A+Q+ +DI+D M + G D DK TY KL G
Sbjct: 192 IIGGANYEQIDALRTYGREIGIAFQIIDDILDATSDETTMGKSIGSDAELDKTTYVKLHG 251
Query: 252 IDGSKKHAKELIAEAKQ 268
++ S++ A + +A Q
Sbjct: 252 LEKSRELAAQRTQKAIQ 268
>gi|422296714|ref|ZP_16384379.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
gi|407992059|gb|EKG33764.1| geranyltranstransferase [Pseudomonas avellanae BPIC 631]
Length = 295
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELDRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIV 291
>gi|406665282|ref|ZP_11073056.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
gi|405387208|gb|EKB46633.1| Farnesyl diphosphate synthase [Bacillus isronensis B3W22]
Length = 294
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 152/246 (61%), Gaps = 15/246 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L E+M YSL GGKR+ +A CEM S + ++ A+E++ T ++I DDLP
Sbjct: 30 PAHLKESMLYSLKAGGKRIRPLFVVAVCEMYNQSLETSYTVGSAVEMIHTYSLIHDDLPS 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI---------IKAKNINS-AVG 148
+D+D+LRRGKP+NH V+GEA A LA AL+ LA IA I+ N+ S A G
Sbjct: 90 MDDDELRRGKPTNHVVYGEALATLAGDALNTLAFGVIARLNNLSAEKRIELVNLLSVAAG 149
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+EG+ GQ++D++ E + ++L EL +H +KTG + SI +G ++ + + E + +
Sbjct: 150 AEGMVGGQVLDMDGEKRLLNLKELETVHVNKTGALLRFSIEAGAVLANASISDREALVEY 209
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAK---ELIA 264
++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ ++G+K+ EL
Sbjct: 210 AHHIGLAFQIQDDILDIEGTSEQLGKTAGKDVASDKSTYPALLTLEGAKQKLDEHYELAI 269
Query: 265 EAKQEL 270
EA Q++
Sbjct: 270 EALQKI 275
>gi|222528996|ref|YP_002572878.1| polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455843|gb|ACM60105.1| Polyprenyl synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 299
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 170/294 (57%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K++ E L++ + P I+++AMRYS+ GGKRL LC+ S +M+ Q
Sbjct: 5 KLEEYIYLSQKKVEENLEKILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMVSKDQ 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
V + +A AIEL+ T ++I DDLP +DND LRRGKP+NH VFGEA AILA AL L
Sbjct: 65 IVDEKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVVFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I + AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRYGCDKNLVKAAKYLFWASGVEGMIGGQVIDITNSGQDIKSEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ ++ + + +GK +G+A+Q+ +D++DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAAAEDDVVSDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K T+ G+ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKNTFVTFYGLGKAQQLVEHYSKKAIDVIKKYDNSEL--LIELTNYLIN 296
>gi|288940506|ref|YP_003442746.1| polyprenyl synthetase [Allochromatium vinosum DSM 180]
gi|288895878|gb|ADC61714.1| Polyprenyl synthetase [Allochromatium vinosum DSM 180]
Length = 297
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 177/294 (60%), Gaps = 18/294 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLP---HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
+++++A A ++ ALD+ +P P P+ LHEAMRY+ L GGKR+ L A+ E +G
Sbjct: 6 LDDFRARCAARVETALDQILP-PVSVQPSRLHEAMRYTVLAGGKRIRPLLAYAAGEALGL 64
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ ACA+E++ ++I DDLP +D+DDLRRG+P+ H+ F EATAILA AL LA
Sbjct: 65 DAALLDHPACAVEMIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLA 124
Query: 132 MQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q +A + + A G+ G+ GQ MD+ +EG + L +L IH HKTG
Sbjct: 125 FQALAEAPGLSAESRVAMVSALARASGARGMVGGQAMDLEAEGTPLDLVQLENIHIHKTG 184
Query: 182 KFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDM 239
I S+ GV+ GG + ++ ER+ ++ K +G+A+Q+ +D++DV G + ++ + GRD
Sbjct: 185 ALIRVSVQMGVLAHGGLDADKAERLDHYAKCLGLAFQIQDDVLDVEGDTAQIGKTAGRDQ 244
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+KATYP LVG+ +K A +LI EA + ++ F RA PL + N ++ N
Sbjct: 245 ELNKATYPALVGLAEAKAMANQLINEAIESVSIFG-ERAQPLVWIANALLGRKN 297
>gi|30249147|ref|NP_841217.1| polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
gi|30180466|emb|CAD85071.1| Polyprenyl synthetase [Nitrosomonas europaea ATCC 19718]
Length = 297
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 153/264 (57%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA LH+AMRYS L GGKR+ L A+ E+ G ++ A A+EL+ +++ DDLPC
Sbjct: 31 PARLHDAMRYSVLGGGKRVRPLLSFAAGELSGADKTHATIAGAAVELIHVYSLVHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ-----------HIAIIKAKNINSAV 147
+DND LRRGKP+ H + E TA+L +L LA Q H+ + +++ A
Sbjct: 91 MDNDTLRRGKPTCHVRYDEPTALLVGDSLQSLAFQLLTETNLTEDPHVQLEMVRHLAFAA 150
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ +D++S GK +SL EL F+H HKTG I A+++ G G +E + + +
Sbjct: 151 GSRGMAGGQAIDLDSVGKTLSLPELEFMHIHKTGALIRAAVILGARCGNRLDETQFKLLD 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+F K +G+A+Q+ +DI+D + KT G+D +K TY ++GI +++ A EL E
Sbjct: 211 HFAKCMGLAFQVIDDILDTEATTAALGKTAGKDAENNKPTYVSILGIKQARELAHELRQE 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A L F + A L + +FIV
Sbjct: 271 ATGVLNQFG-SEALRLQQVTDFIV 293
>gi|410478476|ref|YP_006766113.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
gi|424866252|ref|ZP_18290093.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|124515823|gb|EAY57332.1| Geranyltranstransferase [Leptospirillum rubarum]
gi|387223049|gb|EIJ77421.1| Geranyltranstransferase [Leptospirillum sp. Group II 'C75']
gi|406773728|gb|AFS53153.1| geranylgeranyl pyrophosphate synthase [Leptospirillum ferriphilum
ML-04]
Length = 303
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 153/266 (57%), Gaps = 16/266 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+MRYSL GGKR+ L +A+ E +G + + +EL+ T ++I DDLP +DN
Sbjct: 39 LAESMRYSLLAGGKRIRPVLAMAAIEALGKDPIPYIPLLAPLELIHTYSLIHDDLPSMDN 98
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL--HCLAMQ-----------HIAIIKAKNINSAVG 148
D LRRGKP+NH ++G+ATAILA AL H + I + + ++ G
Sbjct: 99 DSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIQELSVGAG 158
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ MDI SEGK ++LS L F+H+HKTG I AS+ G ++G + + E + +
Sbjct: 159 VNGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSPDFEHLDRY 218
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ VG+A+Q+ +D++DV G + K +D R K TYP L+G++ ++ A+ + EA
Sbjct: 219 GQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEAL 278
Query: 268 QELAYFDPTRAAPLDHLVNFIVSFGN 293
++ F +A L L ++I+ N
Sbjct: 279 DAISSFG-EKAKHLRELASYIIERRN 303
>gi|422590457|ref|ZP_16665112.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877558|gb|EGH11707.1| geranyltranstransferase [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 295
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 170/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELGRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVWLGALASGQADQARLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKGYALELRDQALAALSPFDAA-AEPLRELARYIV 291
>gi|375309124|ref|ZP_09774405.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
gi|375078433|gb|EHS56660.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus sp. Aloe-11]
Length = 307
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 168/279 (60%), Gaps = 24/279 (8%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSLP-GGKRLMSTLCIASCE 67
P F EY A ++ AL E P PA+L E+M YSL GGKRL L IA+ E
Sbjct: 11 PSF---KEYLNGTADAVSSALTEQFPAHWNIPAVLRESMNYSLTAGGKRLRPLLVIAAAE 67
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
GGS+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA AILA AL
Sbjct: 68 AFGGSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAILAGDAL 127
Query: 128 HCLAMQHIAIIKA---------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSEL 172
L ++++A + ++ G+ G+ GQ+ D++ E + EL
Sbjct: 128 --LTHAFYSVVQAGRRHGVSSDALLSIVEELSEMSGARGMVGGQVADMSGEQGLTGIEEL 185
Query: 173 NFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEM 231
+IH HKT I S+++G IGG ++ ++E +R FG+ +G+A+Q+ +DI+D+IG +M
Sbjct: 186 EYIHLHKTADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKM 245
Query: 232 REKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+KT D+ ++K TYP +G++ S++ ++L A AK+ L
Sbjct: 246 GKKTQSDVEQEKVTYPFFIGMEASQQQVEKLTASAKKAL 284
>gi|388456998|ref|ZP_10139293.1| polyprenyl synthetase [Fluoribacter dumoffii Tex-KL]
Length = 299
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 145/247 (58%), Gaps = 15/247 (6%)
Query: 39 HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
PA LH+AMRY+ L GGKR+ + L A+ E +G V + AIE++ ++I DDLP
Sbjct: 31 QPAELHKAMRYAVLNGGKRIRAALVYATGEALGADFDVLDHIGSAIEMIHAFSLIHDDLP 90
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNI------------NS 145
LDNDDLRRGKPS HK F EATAILA AL LA + IA + I
Sbjct: 91 ALDNDDLRRGKPSCHKAFSEATAILAGDALQTLAFETIASLDKNKIAVEIEIEMIRLLAR 150
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI-ER 204
A+GS G+A G+ +DI + K+VSL+EL ++ KTG + ASI+ G + +++ I
Sbjct: 151 AIGSLGMAGGEELDIEMKDKDVSLNELENTYKLKTGYLLTASILLGALAANCHDKNILNN 210
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ FG Y+G+A+Q+ +DI+ + + K G D R+K TYP L+G+ +K+ E+
Sbjct: 211 LQKFGDYIGLAFQIHDDIIGIESDTQTLGKHQGSDQERNKPTYPTLIGMRKAKQKENEIF 270
Query: 264 AEAKQEL 270
+A + L
Sbjct: 271 NKALKHL 277
>gi|237797521|ref|ZP_04585982.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020371|gb|EGI00428.1| geranyltranstransferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 295
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 168/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+AL ++N AL+ P P A L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQALSQTRVNAALESLFQAPGPELARLYDAMRYSVMNGGKRVRPLLAYAACEALGGE 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 ARDADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDSLQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL A L F P A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKSYALELRDMALDALNPFGPA-AEPLRDLARYIV 291
>gi|187779512|ref|ZP_02995985.1| hypothetical protein CLOSPO_03108 [Clostridium sporogenes ATCC
15579]
gi|187773137|gb|EDU36939.1| polyprenyl synthetase [Clostridium sporogenes ATCC 15579]
Length = 290
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLLLNTYALYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGENALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GID
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGID 251
>gi|440720697|ref|ZP_20901109.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|440727848|ref|ZP_20908074.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|443641335|ref|ZP_21125185.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
gi|440363253|gb|ELQ00423.1| polyprenyl synthetase [Pseudomonas syringae BRIP34881]
gi|440365067|gb|ELQ02181.1| polyprenyl synthetase [Pseudomonas syringae BRIP34876]
gi|443281352|gb|ELS40357.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas syringae pv.
syringae B64]
Length = 295
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 169/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTTLAIAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|33597051|ref|NP_884694.1| geranyltranstransferase [Bordetella parapertussis 12822]
gi|33566502|emb|CAE37758.1| probable geranyltranstransferase [Bordetella parapertussis]
Length = 303
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 164/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ + LDE +P P LHEAMRY+ L GGKR+ + L A+ C + G + +V
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAVLVYAAGQACPVNGSTLAVG 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A + A+ + A GS+G+A GQ +D++S G+ ++ EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
S+ G I+ G + + + ++ + +G+A+Q+ +DI+DV KT G+D +K
Sbjct: 195 ACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G+D ++ A+EL A Q LA + A L L +FIV
Sbjct: 255 PTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIV 299
>gi|33600896|ref|NP_888456.1| geranyltranstransferase [Bordetella bronchiseptica RB50]
gi|33568496|emb|CAE32408.1| probable geranyltranstransferase [Bordetella bronchiseptica RB50]
Length = 303
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 165/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ + LDE +P P+ LHEAMRY+ L GGKR+ + L A+ C + G + +V
Sbjct: 15 RAQHVEHVLDELLPGADIAPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A + A+ + A GS+G+A GQ +D++S G+ ++ EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
S+ G I+ G + + + ++ + +G+A+Q+ +DI+DV KT G+D +K
Sbjct: 195 ACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G+D ++ A+EL A Q LA + A L L +FIV
Sbjct: 255 PTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIV 299
>gi|320354500|ref|YP_004195839.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
gi|320123002|gb|ADW18548.1| farnesyl-diphosphate synthase [Desulfobulbus propionicus DSM 2032]
Length = 298
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 156/262 (59%), Gaps = 18/262 (6%)
Query: 45 EAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV---AMSMACAIELLVTMAVIQDDLPCLD 100
E+MRYSL GGKR+ LC+A E + ++ A+S+ACA+E + T ++I DDLP +D
Sbjct: 34 ESMRYSLFVGGKRIRPILCLAGAEAVDSGEATRQRALSVACALECIHTYSLIHDDLPAMD 93
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AVG 148
+DDLRRGKP+NH VFGEA AILA L A ++ + +IN A G
Sbjct: 94 DDDLRRGKPTNHTVFGEAAAILAGDGLLTFAFDLLSSQASADINDAARIRIIQTIARAAG 153
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ +D+ EG++V L IHR KTG I AS++SG ++ G + E+ ++ +
Sbjct: 154 PLGMVGGQSLDMIYEGQQVGYEMLRTIHRSKTGALITASVLSGAMVAGASAEQETALKTY 213
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G +G+A+Q+ +D++DV + E K G D+ DK TYP L G + S+ A+E + EA
Sbjct: 214 GDNIGLAFQIVDDLLDVEATTEQLGKPAGSDLKSDKVTYPSLFGKETSRTMAREAVQEAI 273
Query: 268 QELAYFDPTRAAPLDHLVNFIV 289
LA FD +A PL +L NFIV
Sbjct: 274 AALAAFDH-QADPLRNLANFIV 294
>gi|422402853|ref|ZP_16479913.1| geranyltranstransferase, partial [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872288|gb|EGH06437.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 294
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 172/291 (59%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A + + +N+ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIV 291
>gi|357417905|ref|YP_004930925.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
gi|355335483|gb|AER56884.1| geranylgeranyl pyrophosphate synthase [Pseudoxanthomonas spadix
BD-a59]
Length = 292
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 13/263 (4%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A+++ +LD A+P P P LH AMR++ L GGKR+ L A+ M G + V + A
Sbjct: 11 AQRVEASLDAALPDPVRAPQRLHAAMRHAALGGGKRMRPLLVYAAGTMTGADEGVLDAPA 70
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---- 136
A+EL+ +++ DDLP +D+D LRRG+P+ H F EATA+LA AL LA + +A
Sbjct: 71 TAVELIHAYSLVHDDLPAMDDDALRRGQPTVHIAFDEATAVLAGDALQTLAFEVLAGSDA 130
Query: 137 -----IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG 191
+ + + A G G+ GQ +DI++ G+ SL L +H KTG I AS+ G
Sbjct: 131 GAVLRVAWLQTLAQASGVAGMCGGQALDIDATGQLQSLQALQHMHALKTGALIRASVRLG 190
Query: 192 VIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
+ GG E ++R+ F + +G+A+Q+ +DI+D+ S E KT G+D + K+TYP L+
Sbjct: 191 ALAGGVEEATLQRLDAFAQALGLAFQVRDDILDIEASSETLGKTAGKDAAQSKSTYPALL 250
Query: 251 GIDGSKKHAKELIAEAKQELAYF 273
GIDG+K L A+ + LA F
Sbjct: 251 GIDGAKAKLDALAAQMHELLAPF 273
>gi|340750026|ref|ZP_08686873.1| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
gi|340562527|gb|EEO34717.2| dimethylallyltransferase [Fusobacterium mortiferum ATCC 9817]
Length = 295
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 165/296 (55%), Gaps = 22/296 (7%)
Query: 17 NEYKALKAKQINEALDEAV-PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQS 74
EY + K + + +D+ + L +P ++ E M+Y+ L GGKRL L + +++G +
Sbjct: 4 KEYLGMGKKLVEDGIDKYLGELTYPEVIAEGMKYAVLNGGKRLRPILLFMTLDILGCERE 63
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL------- 127
++ A AIE++ + +++ DDLP LDNDD RRGK + HK FGEA IL AL
Sbjct: 64 KGLATASAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYV 123
Query: 128 ------HCLAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
H A + + I+K +S G G+ GQ++DI SEGK++ L L ++H HKTG
Sbjct: 124 LTEKNSHLSAEKIVEIVKL--TSSYAGINGMIGGQMVDIASEGKKIDLETLRYMHAHKTG 181
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMM 240
K I+ + +I + E+ E + + + +G+A+Q+ +DI+D+ G E K G D+
Sbjct: 182 KLIKLPVEVACVIADASIEDREVLTKYSELIGLAFQIKDDILDIEGDFETIGKPVGSDLE 241
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQEL-AYFDPTRAAPLDHLVNFIVSFGNNN 295
DK+TYP ++G+ SKK E I EAK + A F R+ L L ++I GN +
Sbjct: 242 HDKSTYPSILGMAESKKLLSETIEEAKSIIRARFGEERSKTLLDLADYI---GNRD 294
>gi|416019022|ref|ZP_11565915.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|416024129|ref|ZP_11568308.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|320321850|gb|EFW77946.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331043|gb|EFW87017.1| geranyltranstransferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 295
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 172/291 (59%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A + + +N+ A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVNTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEPAKRYALELRDQALTALSPFDAA-AEPLRELARYIV 291
>gi|108759145|ref|YP_632810.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
gi|108463025|gb|ABF88210.1| geranylgeranyl diphosphate synthase [Myxococcus xanthus DK 1622]
Length = 297
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 17/269 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAV----PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
FQ+N + A + ++ L+E V P P L EAMRYSL GGKRL LC+A ++
Sbjct: 4 FQLNSFLAAQQARVEALLNERVARLGPSGTPPQLAEAMRYSLLAGGKRLRPVLCLAFADL 63
Query: 69 IG-GS--QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
+ GS +VA ACA+E + T +++ DDLP +DNDD RRG+ +NHKV+GEA AILA
Sbjct: 64 VARGSAVSAVAGDAACALEYVHTYSLVHDDLPAMDNDDYRRGRLTNHKVYGEAMAILAGD 123
Query: 126 ALHCLAMQHIA----IIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
AL A +A ++A + + A G+ G+ GQ++D +E + +L L +HR
Sbjct: 124 ALLTEAFTLVASGPESMRAALCRELAVASGAAGMVGGQVLD-TAEDRPSALDYLIRMHRM 182
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGR 237
KTG I A+ GV+ GG+ + + R +G VG+A+Q+ +D++DV + E+ + G
Sbjct: 183 KTGALIRAACRMGVLASGGDADALARADTYGDAVGLAFQIADDVLDVTATAAELGKPAGA 242
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEA 266
D + T+P +VG++ S+ A + +AEA
Sbjct: 243 DAAAGRFTFPAVVGLEASRTLADQKVAEA 271
>gi|374324623|ref|YP_005077752.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
gi|357203632|gb|AET61529.1| geranylgeranyl pyrophosphate synthetase [Paenibacillus terrae
HPL-003]
Length = 307
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 165/272 (60%), Gaps = 17/272 (6%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY ++ AL E P PA+L EAM YSL GGKRL L IA+ E GGS
Sbjct: 13 LKEYLTGTVDAVSSALTEQFPAHWSIPAVLREAMNYSLNAGGKRLRPLLVIAATEAFGGS 72
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA A+LA AL A
Sbjct: 73 REAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDALLTHAF 132
Query: 133 QHI------------AIIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ A++ + ++ G+ G+ GQ+ D++ E + EL +IH HK
Sbjct: 133 YSVVQSGRRHGISSDALLSIVEELSEMSGARGMVGGQVADMSGEQGMTGIEELEYIHLHK 192
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
T I S+++G IGG ++ ++E +R FG+ +G+A+Q+ +DI+D+IG +M +KT D
Sbjct: 193 TADLIIFSLLAGGRIGGADKNQLEALRQFGRDLGLAFQIQDDILDLIGDESKMGKKTQSD 252
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+ ++K TYP +G++ S++ ++L A AK+ L
Sbjct: 253 VEQEKVTYPFFIGMEASQQQVEKLTASAKKAL 284
>gi|410472460|ref|YP_006895741.1| geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|412338917|ref|YP_006967672.1| geranyltranstransferase [Bordetella bronchiseptica 253]
gi|427815400|ref|ZP_18982464.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
gi|408442570|emb|CCJ49121.1| probable geranyltranstransferase [Bordetella parapertussis Bpp5]
gi|408768751|emb|CCJ53521.1| probable geranyltranstransferase [Bordetella bronchiseptica 253]
gi|410566400|emb|CCN23961.1| probable geranyltranstransferase [Bordetella bronchiseptica 1289]
Length = 303
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 164/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ + LDE +P P LHEAMRY+ L GGKR+ + L A+ C + G + +V
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A + A+ + A GS+G+A GQ +D++S G+ ++ EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
S+ G I+ G + + + ++ + +G+A+Q+ +DI+DV KT G+D +K
Sbjct: 195 ACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G+D ++ A+EL A Q LA + A L L +FIV
Sbjct: 255 PTYVSLLGLDQARALAQELRQAAHQALAPLGES-GARLGQLADFIV 299
>gi|456736906|gb|EMF61632.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase [Stenotrophomonas maltophilia
EPM1]
Length = 292
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 150/261 (57%), Gaps = 13/261 (4%)
Query: 26 QINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I LD A+P P P LH+AMRYS L GGKR+ L AS + G + A +
Sbjct: 13 RIESQLDAALPSPAEAPQRLHQAMRYSVLGGGKRMRPLLVYASGHLFGAQPESLDAAAMS 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+EL+ +++ DDLP +D+D LRRGKP+ H F EATAILA AL A +A
Sbjct: 73 VELIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTRAFGLLADAPLPA 132
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + + A G+ G+ GQ +DI++ G++ +L+ L +H KTG I A++ G +
Sbjct: 133 TLRVACLQTLAHASGASGMCGGQALDIDATGQQQALAALTRMHALKTGALIRAAVRMGAL 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G +E ++ ++ +F +G+A+Q+ +DI+DV S E KT G+D +DK+T+P L+G+
Sbjct: 193 CGQAHEPQLAQLDSFADALGLAFQVRDDILDVEASSEQLGKTAGKDQAQDKSTFPALLGM 252
Query: 253 DGSKKHAKELIAEAKQELAYF 273
D +K EL A + LA +
Sbjct: 253 DSAKAQLHELAARMQSILAGY 273
>gi|335357254|ref|ZP_08549124.1| geranyltranstransferase [Lactobacillus animalis KCTC 3501]
Length = 292
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 147/243 (60%), Gaps = 12/243 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCLD 100
L AM+YSL GGKR+ L + C+ +G +S+A ++E L T ++I DDLP +D
Sbjct: 31 LQAAMQYSLEAGGKRIRPLLIMLICQSLGKKIDPDVLSVAGSLEFLHTYSLIHDDLPEMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK---------AKNINSAVGSEG 151
NDDLRRGKP+NHKVFG+ A+LA AL A IA K + A G+ G
Sbjct: 91 NDDLRRGKPTNHKVFGQDIAVLAGDALLTEAFGWIAKTKLSPKKRVTLVAELAKAAGANG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E ++L+EL +H++KTG+ +E + +G I+GG ++ + + FG+
Sbjct: 151 MVAGQTSDILGEKTTLTLAELMQVHKNKTGQLLEYACFAGAILGGATPKQEQALVTFGQK 210
Query: 212 VGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+++DI+DV + E+ + +D+ +K TYP+L+G++G+K+ + +AK +L
Sbjct: 211 FGLAFQIYDDILDVTATTAELGKTANKDVAENKNTYPRLLGLEGAKQALANTLEQAKDQL 270
Query: 271 AYF 273
+
Sbjct: 271 EFL 273
>gi|110799631|ref|YP_696503.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|168210817|ref|ZP_02636442.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|182625644|ref|ZP_02953413.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|422874739|ref|ZP_16921224.1| geranyltranstransferase [Clostridium perfringens F262]
gi|110674278|gb|ABG83265.1| geranyltranstransferase [Clostridium perfringens ATCC 13124]
gi|170711106|gb|EDT23288.1| geranyltranstransferase [Clostridium perfringens B str. ATCC 3626]
gi|177909046|gb|EDT71521.1| geranyltranstransferase [Clostridium perfringens D str. JGS1721]
gi|380304380|gb|EIA16669.1| geranyltranstransferase [Clostridium perfringens F262]
Length = 290
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 151/232 (65%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIKA-KNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM + I+ +KA K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGISALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|306820732|ref|ZP_07454359.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551231|gb|EFM39195.1| geranyltranstransferase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 295
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 160/289 (55%), Gaps = 18/289 (6%)
Query: 20 KALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
K + + I + +D + L + + E+M YSL GGKRL L I + ++ ++
Sbjct: 11 KEIVERHIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLN 68
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
+AC +E++ T ++I DDLP +DNDDLRRGKP+NH V+GE AILA +L L+ + +
Sbjct: 69 IACVLEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEVLFDF 128
Query: 139 KAKN-----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
KN I+ G G+ GQ+ D+ +E KE+ + L +IH +KT K I AS
Sbjct: 129 LYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMAS 188
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATY 246
I+S I ++E I + ++ +GMA+Q+ +DI+DV+G E+ K+ G+D K TY
Sbjct: 189 ILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTY 248
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNNN 295
PK G++ SK K I AK+E++ D L +++ GN N
Sbjct: 249 PKYFGLEESKIKLKNYIDNAKREISKIDSKNIEFFVELADYV---GNRN 294
>gi|312899122|ref|ZP_07758500.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
gi|310619789|gb|EFQ03371.1| putative geranyltranstransferase [Megasphaera micronuciformis
F0359]
Length = 293
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 149/266 (56%), Gaps = 14/266 (5%)
Query: 23 KAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
+ K+I+ L E + P L+EAM YSL GGKR+ L +A E G + +
Sbjct: 10 RKKRIDTRLAELLQTSTPEFSGLYEAMNYSLNAGGKRIRPVLFLAVLEAAGTDPDAFLDL 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
ACA+E + + ++I DDLP +DNDD RRGKP+NHKV+G+ TA+LA L A + +A
Sbjct: 70 ACALECVHSYSLIHDDLPAMDNDDFRRGKPTNHKVYGDGTAVLAGDGLLTYAFELMAAQS 129
Query: 137 ------IIKAKNINS-AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
I++A I + A G G+ GQ D+ SEG + + + +HR KTG A +
Sbjct: 130 AAPAHKILQAIRIFAHAAGPAGMVGGQYFDLQSEGGVPTRAAMELMHRSKTGVIFTAIVQ 189
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPK 248
++ G E ++ + +G +G+A+Q+ +DI+DV+GS EM + G D K TY
Sbjct: 190 MAALLAGVRNETMKALTTYGDQLGLAFQITDDILDVVGSEKEMGKPVGSDEKNHKTTYVS 249
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFD 274
L+G++G+++ AK+ A A L FD
Sbjct: 250 LLGVEGAREEAKQTTARALAALQEFD 275
>gi|221065759|ref|ZP_03541864.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
gi|220710782|gb|EED66150.1| Polyprenyl synthetase [Comamonas testosteroni KF-1]
Length = 324
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 158/278 (56%), Gaps = 14/278 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
+ EAL V + PA L EAMRY+ L GGKRL L A+ E +GG + + CA+E
Sbjct: 43 RTEEALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGQAAATLRAGCAVE 102
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------A 136
L+ +++ DD+PC+DND +RRGKP+ H FGEA+A+LA AL LA + +
Sbjct: 103 LIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPC 162
Query: 137 IIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++A + + +A GS G+A GQ +D+ S GK++S ++L +HR KTG + S++ G
Sbjct: 163 SMQARLCRLLGAAAGSHGMAGGQAIDLASVGKQLSETQLREMHRLKTGALLLGSVLMGAA 222
Query: 194 IGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+ + + ++G+ +G+A+Q+ +DI+DV+ KT G+D DK T+ L+G
Sbjct: 223 CNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLG 282
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++ ++ HA+EL +A L L L + +V
Sbjct: 283 LEAARAHAEELRLQAHAALTRSGLADTQALAALADMVV 320
>gi|315646331|ref|ZP_07899451.1| Polyprenyl synthetase [Paenibacillus vortex V453]
gi|315278530|gb|EFU41846.1| Polyprenyl synthetase [Paenibacillus vortex V453]
Length = 301
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 159/258 (61%), Gaps = 22/258 (8%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LH++M YSL GGKR+ L IA+CE GGS+ A+ +ACA+E++ T +++ DDLP
Sbjct: 33 PETLHKSMSYSLMAGGKRMRPLLVIAACEAGGGSRDAAIPVACAVEMVHTYSLVHDDLPA 92
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA---------------KNI 143
+D+DD RRGKP+NHKVFGEA+AILA AL L +II+A +++
Sbjct: 93 MDDDDYRRGKPTNHKVFGEASAILAGDAL--LTHAFYSIIQASRQFGVPAERVLSIVEDL 150
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
G G+ GQ+ D+ E +L +L +IH HKT I S+++G I G E +IE
Sbjct: 151 AEYAGPRGMVGGQVADMEGEQGLTTLEQLEYIHLHKTSDLIMFSLMAGGHIAGCTEAQIE 210
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R FG ++G+A+Q+ +DI+D++G ++ + D+ ++K TYP +G+D S++ + L
Sbjct: 211 SLRIFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDPSRREVERL 270
Query: 263 IAEAKQ---ELAYFDPTR 277
AEAK+ E + DP+R
Sbjct: 271 TAEAKRVITEGNFNDPSR 288
>gi|403238230|ref|ZP_10916816.1| polyprenyl synthetase [Bacillus sp. 10403023]
Length = 297
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 171/291 (58%), Gaps = 16/291 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+V ++ + + +I E L + + L P I+ ++M YSL GGKR+ L + + G
Sbjct: 5 EVEQFLSFQKNKIEEQLPKYISKLSAPKIIKDSMDYSLEAGGKRIRPLLLLGTLHSFGKD 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+++ +S ACAIE++ T ++I DDLP +D+DDLRRGKP+NHKVFGEA A+LA L +
Sbjct: 65 ENIGLSTACAIEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVFGEAIAVLAGDGLLTYSF 124
Query: 133 QHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q ++ ++ + A G EG+ GQ+ D+ EG ++L EL +IHRHKT
Sbjct: 125 QLVSESVGNTISPEKKLLLITELAKAAGPEGMVGGQVADMEGEGAVLNLDELEYIHRHKT 184
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDM 239
GK + S+++G I+ E+++++ F ++G+A+Q+ +DI+D+ G+ + K G D
Sbjct: 185 GKLLAYSVIAGAILADATSEQLDKLTQFAHHLGLAFQIRDDILDIEGTELVLGKPVGSDT 244
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP L+ ++G+K+ I EAK+ L Y + LD++ N I S
Sbjct: 245 GNHKNTYPALLTLEGAKEKLTFHIDEAKRFL-YSVNMKHDILDYMCNLIAS 294
>gi|381159562|ref|ZP_09868794.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
gi|380877626|gb|EIC19718.1| geranylgeranyl pyrophosphate synthase [Thiorhodovibrio sp. 970]
Length = 297
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 165/264 (62%), Gaps = 14/264 (5%)
Query: 40 PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA LH+AMR+ +L GGKRL TL A+ +G ++ + ACA+EL+ T ++I DDLP
Sbjct: 32 PARLHQAMRHGALGGGKRLRPTLAYAAASAVGVTREQIDAAACALELIHTYSLIHDDLPA 91
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS----------AVG 148
+D+DDLRRG+P+ HK F EATAILA AL LA Q +A A +++ A G
Sbjct: 92 MDDDDLRRGQPTCHKAFDEATAILAGDALQTLAFQWLATDSANTVDARIRMIEVLARAAG 151
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI-VSGVIIGGGNEEEIERMRN 207
S G+ AGQ +D+ SEG+ + + L IH HKTG I+AS+ ++ ++ E+ +
Sbjct: 152 SRGMVAGQALDLASEGQALDRAALENIHLHKTGALIQASVNMAALVKPETTGEQASALDG 211
Query: 208 FGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+ + +G+A+Q+ +D++DV G E + +++G+D KATYP L+GID + K A LI EA
Sbjct: 212 YARCIGLAFQIQDDLLDVEGQTEVLGKQSGQDAAHHKATYPSLLGIDAAHKEAARLIEEA 271
Query: 267 KQELAYFDPTRAAPLDHLVNFIVS 290
+ L+ FD + A PL + ++I++
Sbjct: 272 HRCLSGFD-SGADPLRWIADYIIA 294
>gi|386041718|ref|YP_005960672.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
gi|343097756|emb|CCC85965.1| polyprenyl synthetase [Paenibacillus polymyxa M1]
Length = 307
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 165/277 (59%), Gaps = 21/277 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSLP-GGKRLMSTLCIASCEMIG 70
EY A+ A ++ AL E P P +L E+M YSL GGKRL L IA+ E G
Sbjct: 11 LSFKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFG 70
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GS+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA A+LA AL L
Sbjct: 71 GSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDAL--L 128
Query: 131 AMQHIAIIKA---------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
I++A ++++ G+ G+ GQ+ D++ E + EL +I
Sbjct: 129 THAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYI 188
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREK 234
H HKT I S+++G I G ++ ++E +R FG+ +G+A+Q+ +DI+D++G +M +K
Sbjct: 189 HLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKK 248
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
T D+ ++K TYP +G+D S + +EL AK+ +A
Sbjct: 249 TQSDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIA 285
>gi|168206126|ref|ZP_02632131.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
gi|170662394|gb|EDT15077.1| geranyltranstransferase [Clostridium perfringens E str. JGS1987]
Length = 290
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 149/232 (64%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGKSALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|310642662|ref|YP_003947420.1| polyprenyl synthetase [Paenibacillus polymyxa SC2]
gi|309247612|gb|ADO57179.1| Polyprenyl synthetase [Paenibacillus polymyxa SC2]
Length = 303
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 165/277 (59%), Gaps = 21/277 (7%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSLP-GGKRLMSTLCIASCEMIG 70
EY A+ A ++ AL E P P +L E+M YSL GGKRL L IA+ E G
Sbjct: 7 LSFKEYLAVTADAVSSALTEQFPAHWDIPDVLRESMNYSLTAGGKRLRPLLVIAAAEAFG 66
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
GS+ A+ +ACA+E++ T ++I DDLP +D+DD RRGK +NHKV+GEA A+LA AL L
Sbjct: 67 GSREAALPVACAVEMVHTYSLIHDDLPAMDDDDYRRGKLTNHKVYGEAVAVLAGDAL--L 124
Query: 131 AMQHIAIIKA---------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
I++A ++++ G+ G+ GQ+ D++ E + EL +I
Sbjct: 125 THAFYCIVQAGRLHGVSSDALLSIVEDLSEMSGARGMVGGQVADMSGEQGMTGIKELEYI 184
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREK 234
H HKT I S+++G I G ++ ++E +R FG+ +G+A+Q+ +DI+D++G +M +K
Sbjct: 185 HLHKTADLIIFSLLAGGRIAGADKSQLEALRCFGRDLGLAFQIQDDILDLVGDESKMGKK 244
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
T D+ ++K TYP +G+D S + +EL AK+ +A
Sbjct: 245 TQSDVEQEKVTYPYFIGVDASLRQVEELTVSAKKVIA 281
>gi|169343610|ref|ZP_02864609.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
gi|169298170|gb|EDS80260.1| geranyltranstransferase [Clostridium perfringens C str. JGS1495]
Length = 290
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 149/232 (64%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKVLVDYSLEEGTSALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|422667496|ref|ZP_16727359.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330978746|gb|EGH77971.1| polyprenyl synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 295
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYQAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHPTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A Q L+ FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFDAA-AEPLRQLARYIV 291
>gi|404401538|ref|ZP_10993122.1| geranyltranstransferase [Pseudomonas fuscovaginae UPB0736]
Length = 295
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 163/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A K++N ALD P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IKTYQAASQKRVNAALDTLFVAPSAGLARLYEAMRYSVMNGGKRVRPLLVYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q------------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
I + + A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSDLSAEIRLSMVSTLAQAAGPAGMVGGQAIDLGSVGLKLDQKALETMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + ++E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVTLGALASADAQKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>gi|168214394|ref|ZP_02640019.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|168215448|ref|ZP_02641073.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
gi|170714145|gb|EDT26327.1| geranyltranstransferase [Clostridium perfringens CPE str. F4969]
gi|182382163|gb|EDT79642.1| geranyltranstransferase [Clostridium perfringens NCTC 8239]
Length = 290
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 149/232 (64%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|70732810|ref|YP_262577.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
gi|68347109|gb|AAY94715.1| geranyltranstransferase [Pseudomonas protegens Pf-5]
Length = 295
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ A+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 ITAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + + + A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS++ G + G E+ E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+ +K++A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLAAAKEYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>gi|311030982|ref|ZP_07709072.1| Polyprenyl synthetase [Bacillus sp. m3-13]
Length = 298
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 160/263 (60%), Gaps = 15/263 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P +L E+M YSL GGKRL L +A+ + G + + M +ACA+E++ T +++ DDLP
Sbjct: 32 PEVLLESMNYSLKAGGKRLRPLLVLATLKSFGKPEELGMPVACAVEMIHTYSLVHDDLPS 91
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------------AIIKAKNINSA 146
+D+DD RRGKP+NHKVFGEA AILA AL + + + + K + A
Sbjct: 92 MDDDDFRRGKPTNHKVFGEAMAILAGDALLTHSFEVMEDLLNFDVKPMKVVTLMKELAKA 151
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G G+ GQ+ D+ EG ++SL +L +IHR+KTGK + SIV+G I+G EE+I ++
Sbjct: 152 AGPTGMVGGQVADMEGEGAQLSLQDLEYIHRNKTGKLLGFSIVAGAILGDATEEQISKLE 211
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+A+Q+ +DI+D+ G + ++ + G D + +K TYP L+ ++G+K+ + I E
Sbjct: 212 QFADHLGLAFQIRDDILDIEGDAAKIGKPVGSDTLNEKVTYPSLLSMNGAKEKLEYHIKE 271
Query: 266 AKQELAYFDPTRAAPLDHLVNFI 288
AK+ L P + L L + I
Sbjct: 272 AKRILEEI-PLESDLLGQLCDLI 293
>gi|452124386|ref|ZP_21936970.1| geranyltranstransferase [Bordetella holmesii F627]
gi|452127781|ref|ZP_21940361.1| geranyltranstransferase [Bordetella holmesii H558]
gi|451923616|gb|EMD73757.1| geranyltranstransferase [Bordetella holmesii F627]
gi|451926650|gb|EMD76783.1| geranyltranstransferase [Bordetella holmesii H558]
Length = 303
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 166/286 (58%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A I + L+E +P PA LH+AMRY+ L GGKR+ + L A+ C + G ++
Sbjct: 15 RADHIEQVLEELIPAADVAPARLHDAMRYAVLGGGKRVRAALVYAAGQACPVSGNMLAIE 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA--------IIKAKNI-NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A +++A + A GS G+A GQ +D++S GK +S EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQATQVLGRAAGSLGMAGGQAIDLHSVGKTLSRDELQTMHSMKTGALL 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDK 243
AS+ G I+ G + + + N+ + +G+A+Q+ +DI+DV S + + G+D + +K
Sbjct: 195 AASVALGGIVAGASSAARQALDNYAQAMGLAFQVVDDILDVTADSASLGKTAGKDAVENK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G+D +++ A+EL A L + A L + +FIV
Sbjct: 255 PTYVSLLGLDQARELAEELRQAALLALGPLGES-GARLAQIADFIV 299
>gi|379011176|ref|YP_005268988.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
gi|375301965|gb|AFA48099.1| geranyltranstransferase CrtE [Acetobacterium woodii DSM 1030]
Length = 298
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/294 (37%), Positives = 160/294 (54%), Gaps = 22/294 (7%)
Query: 16 VNEYKAL---KAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+NE+K L K IN L+ A L P ++ EAM+YSL GGKRL L + +C +
Sbjct: 1 MNEFKTLLSSKVSAINSDLEMAFEQNLDTPEVIIEAMKYSLFAGGKRLRPILMMETCRAL 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL-- 127
G + +A IE++ T ++I DDLP +DNDDLRRGK +NHKV+G+A AILA L
Sbjct: 61 EGDVELIKPLAMGIEMIHTYSLIHDDLPAMDNDDLRRGKATNHKVYGDAMAILAGDGLLN 120
Query: 128 ----HCLAMQH-------IAIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
LA H + + A K+I A G G+ GQ+ D+ SE K + L E+N+I
Sbjct: 121 YAAETMLAGAHNLSGDTLVNYLNAMKSIMGAAGIRGMIGGQVADMLSENKIIDLDEMNYI 180
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREK 234
H HKT +EA + SG II G R+ ++ +G+A+Q+ +DI+D+ G ++ +
Sbjct: 181 HLHKTAALLEACVQSGCIIAGAEPATQGRLISYSHRIGLAFQIVDDILDIEGDEVDLGKP 240
Query: 235 TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
G D K+T+ L G++ SK EL EA + L P R A L L +I
Sbjct: 241 IGSDEKNHKSTFVSLYGLEASKIRVTELETEAIELLKPIGP-RTAFLSQLATYI 293
>gi|398983680|ref|ZP_10690144.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
gi|399012337|ref|ZP_10714661.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398115899|gb|EJM05672.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM16]
gi|398156852|gb|EJM45264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM24]
Length = 295
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEA--VPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYTATSQTRVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + +S A G G+ GQ +D+ S G ++ + L +HRHKT
Sbjct: 122 SALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQNALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IE S+ G + G ++E+ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEQDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>gi|389792829|ref|ZP_10196011.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
gi|388435693|gb|EIL92590.1| farnesyl-diphosphate synthase [Rhodanobacter fulvus Jip2]
Length = 293
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 161/284 (56%), Gaps = 24/284 (8%)
Query: 22 LKAKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMS 78
L+A+Q ALD +P PA LH AMRY+ L GGKRL L A+ + +G +
Sbjct: 10 LRAEQ---ALDHRLPPADQSPADLHRAMRYAVLGGGKRLRPLLVYATAQALGEDGPQLDA 66
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
ACA+EL+ +++ DDLP +D+D LRRG+P+ H VFGEA AILA AL LA + +A
Sbjct: 67 AACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFEILAED 126
Query: 137 ----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
+ + + A G+EG+A GQ +D+ + G+ ++L++L +H KTG I A
Sbjct: 127 TTRQTDPATGMAMLRTLGRACGAEGMAGGQALDLAAVGQPLTLAQLEHMHACKTGALIRA 186
Query: 187 SIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKAT 245
S+ G + GG+ + ++ + ++ VG+A+Q+ +DI+DV G + KT G+D K T
Sbjct: 187 SVRLGALAAGGDADVLQALDDYANAVGLAFQVRDDILDVEGESIVIGKTAGKDAAAGKPT 246
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNF 287
+P ++G+D S+ EL A LA P R A L L ++
Sbjct: 247 FPSIIGLDASRARLAELTNAA---LAAISPLGERGALLRELAHY 287
>gi|293376580|ref|ZP_06622808.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325839379|ref|ZP_08166818.1| geranyltranstransferase [Turicibacter sp. HGF1]
gi|292644806|gb|EFF62888.1| geranyltranstransferase [Turicibacter sanguinis PC909]
gi|325490499|gb|EGC92815.1| geranyltranstransferase [Turicibacter sp. HGF1]
Length = 291
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 156/265 (58%), Gaps = 17/265 (6%)
Query: 38 PHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
P P+ L E+M YSL GGKRL L A E + +A A+E++ T ++I DDL
Sbjct: 25 PIPSELKESMLYSLKVGGKRLRPILLFAVLESFNLAPQKGYHVAAALEMIHTYSLIHDDL 84
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNIN 144
P +D+D LRRGKP+NH VFGEATAILA +L A Q +++I+A ++
Sbjct: 85 PAMDDDALRRGKPTNHIVFGEATAILAGDSLLTHAFKVIAEDERLTTNQRLSLIQALSLA 144
Query: 145 SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIER 204
S G G+ AGQ++D+ +E K VSL +L IH +KTG+ IE +IV+G II ++E I +
Sbjct: 145 S--GPMGMVAGQVLDMEAEVKAVSLEQLKQIHVNKTGRLIEFAIVAGAIIAQADDEVINQ 202
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ F ++G+A+Q+ +DI+DV GS + K G D++ K+TY L + +K +E I
Sbjct: 203 LKQFAYHLGLAFQIKDDILDVEGSTAVLGKNVGSDLVNGKSTYVSLTSLTEAKNMLEEEI 262
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFI 288
AK L P A L+ + ++I
Sbjct: 263 KCAKVILHNL-PVSTAVLEAITDYI 286
>gi|297744549|emb|CBI37811.3| unnamed protein product [Vitis vinifera]
Length = 1187
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 152/296 (51%), Gaps = 54/296 (18%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y +IN L+EA+P+ +P ++EAMRYS+ GGKR +C+A CE+ GG
Sbjct: 305 FDLRSYWTTLISEINTKLEEAIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGG 364
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A ACA+E++ ++I DDLPC+D+D RRG+PSNH V+G AILA AL L
Sbjct: 365 DRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLG 424
Query: 132 MQHIA------------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI +I+ I +VGS G+AAGQ +D+ V +F+ R
Sbjct: 425 FRHIVSHTPSHLVPEGQLIRVIAEIARSVGSTGMAAGQFLDLEGAPNSV-----DFVQRK 479
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ E S V G +GG +++I R+R +G+ VGM YQ +VD
Sbjct: 480 KFGEMAECSAVCGGFLGGAADDDILRLRRYGRAVGMLYQ----VVD-------------- 521
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFG 292
D + + A+EL A+AK+EL+ FD PL V+F G
Sbjct: 522 --------------DKAMEVAEELRAKAKRELSGFDKYGDSVVPLYSFVDFAAERG 563
>gi|158320641|ref|YP_001513148.1| polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
gi|158140840|gb|ABW19152.1| Polyprenyl synthetase [Alkaliphilus oremlandii OhILAs]
Length = 295
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 148/262 (56%), Gaps = 15/262 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M+YSL GGKRL L +AS +M M AC IE++ T ++I DDLP +DN
Sbjct: 32 LIESMKYSLFAGGKRLRPILSLASYQMFRDDIEEVMPYACGIEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKNINSAVGS 149
DD RRGK +NHKV+ E AILA L + + + I+ K I+++ G
Sbjct: 92 DDYRRGKLTNHKVYNEGVAILAGDGLLNYSFELMLENAIKQNDIYKHIVAIKEISNSAGV 151
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ GQ++D+ SE K + L++IH +KT I S+ G II G EE+I M G
Sbjct: 152 HGMIGGQVVDLESENKIIDKEMLDYIHINKTAALITTSLKVGAIIAGAQEEDIRNMEKVG 211
Query: 210 KYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+G+A+Q+ +DI+DV+G ++ + GRD+ + K+TYP L+G++ S + L KQ
Sbjct: 212 LNLGLAFQIKDDILDVVGDEAKLGKSIGRDLEKHKSTYPALIGLEASIEKVGALTNNVKQ 271
Query: 269 ELAYFDPTRAAPLDHLVNFIVS 290
L + ++A L L +++ S
Sbjct: 272 LLHRY-SSKAEFLLELCDYLTS 292
>gi|357380778|pdb|3UCA|A Chain A, Crystal Structure Of Isoprenoid Synthase (Target
Efi-501974) From Clostridium Perfringens
gi|357380779|pdb|3UCA|B Chain B, Crystal Structure Of Isoprenoid Synthase (Target
Efi-501974) From Clostridium Perfringens
Length = 324
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 148/232 (63%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 58 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 117
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 118 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAA 177
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 178 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 237
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 238 GFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 289
>gi|18310802|ref|NP_562736.1| geranyltranstransferase [Clostridium perfringens str. 13]
gi|18145483|dbj|BAB81526.1| geranyltranstransferase [Clostridium perfringens str. 13]
Length = 301
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 148/232 (63%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + S + ++ A AIE++ T ++I DDLP
Sbjct: 35 YNKVLYDSMAYSINVGGKRIRPILMLLSYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 94
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 95 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGKSALKATKIIADAA 154
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 155 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 214
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 215 GFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 266
>gi|422646392|ref|ZP_16709525.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959939|gb|EGH60199.1| geranyltranstransferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 295
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEGLFQAPSPELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAK-------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H++ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLSSRDAETRLQMVSTLAAAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ + ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLAALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+ +K +A EL +A LA F P +A PL L +IV
Sbjct: 242 IARDKPTYPALIGLQAAKGYALELRDQALGALADFGP-QAEPLRELARYIV 291
>gi|375085374|ref|ZP_09732017.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
gi|374567392|gb|EHR38611.1| hypothetical protein HMPREF9454_00628 [Megamonas funiformis YIT
11815]
Length = 292
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 159/278 (57%), Gaps = 15/278 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
+Q+NE E + L L +AM YSL GGKRL L +A+ + +G + ++ +I
Sbjct: 15 QQLNEIYTENMALNKD--LAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLSTSI 72
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK---- 139
E + T ++I DDLP +DNDD RRGK +NHKVFGEA AILA AL +A + IA K
Sbjct: 73 EFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFEIIATDKNVDA 132
Query: 140 ------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++ A G+EG+ GQ++D+ SE K++ + L +H KTG A+I SG I
Sbjct: 133 ETKVKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFCAAIRSGAI 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGI 252
+ G +E+++ + + + G+A+Q+ +D++DV+G + K G D K+TY L +
Sbjct: 193 LAGADEKQLANLTEYARQFGLAFQITDDVLDVVGDEKTIGKPVGSDEKNHKSTYVTLGSL 252
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ +K A+E + +AK L F A L LV+++++
Sbjct: 253 ESAKALAQEAVDKAKASLVDFGEN-AEFLRALVDYLIT 289
>gi|299533199|ref|ZP_07046583.1| Polyprenyl synthetase [Comamonas testosteroni S44]
gi|298718729|gb|EFI59702.1| Polyprenyl synthetase [Comamonas testosteroni S44]
Length = 313
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 159/278 (57%), Gaps = 14/278 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
+ +AL V + PA L EAMRY+ L GGKRL L A+ E +GG + + CA+E
Sbjct: 32 RTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVE 91
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------A 136
L+ +++ DD+PC+DND +RRGKP+ H FGEA+A+LA AL LA + +
Sbjct: 92 LIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPC 151
Query: 137 IIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++AK + +A GS+G+A GQ +D+ S GK++S ++L +HR KTG + S++ G
Sbjct: 152 SMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLKTGALLLGSVLMGAA 211
Query: 194 IGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+ + + ++G+ +G+A+Q+ +DI+DV+ KT G+D DK T+ L+G
Sbjct: 212 CNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLG 271
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++ ++ HA++L +A L L L + +V
Sbjct: 272 LEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVV 309
>gi|442805670|ref|YP_007373819.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741520|gb|AGC69209.1| farnesyl diphosphate synthase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 298
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 155/268 (57%), Gaps = 20/268 (7%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS + GGKR+ L +A +M+ G M A AIE++ T ++I DDLP +DN
Sbjct: 34 LVESMSYSVMAGGKRIRPVLMLAVTKMLSGDPQEVMPFAAAIEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLA--------------MQHIAIIKAKN-INSA 146
DD RRGK +NHKVFGEA AILA AL A M+H +KA I A
Sbjct: 94 DDYRRGKLTNHKVFGEAMAILAGDALLNEAFSLLFEASANAGDKMEH--WVKASCIIARA 151
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G +G+ AGQ++D+ SEG +VS ++L +HR KTG I AS++ + G +E++I+ +
Sbjct: 152 AGRDGMIAGQVIDMESEGTQVSATKLKTMHRKKTGALITASVIVPAVFLGLSEDKIKALT 211
Query: 207 NFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+ + +G+A+Q+ +DI+DV G+ E+ + G D K TY L G+DG+K+ +E+ +
Sbjct: 212 EYAENIGIAFQIRDDILDVEGTIEELGKPVGSDERNRKTTYVSLYGLDGAKEMLREVTRK 271
Query: 266 AKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A + L F RA L + +I N
Sbjct: 272 AVESLDVFGE-RAWFLKEIAYYIAERRN 298
>gi|315924280|ref|ZP_07920504.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622441|gb|EFV02398.1| geranyltranstransferase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 309
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 154/273 (56%), Gaps = 29/273 (10%)
Query: 23 KAKQINEALDEAV--PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
K QI L + P P I+ AM+YSL GGKR+ L + +C M GG + VA+
Sbjct: 21 KGHQIEAYLTDCFVGPFDAPDIIVSAMKYSLFAGGKRVRPILLMETCAMFGGDERVAIPF 80
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
ACAIE++ T ++I DDLP +DNDDLRRG+P+NHKV+GE AILA AL A++
Sbjct: 81 ACAIEMIHTYSLIHDDLPAMDNDDLRRGEPTNHKVYGENIAILAGDALLNAAVETAVEGI 140
Query: 137 -----IIKAKNINS------AVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHKTGKFI 184
+A+ I + A G G+ GQ D+ +E + ++ ++ +IH HKTG +
Sbjct: 141 ETMEPAERARGIAALSLLMRAAGVNGMIGGQTGDLLAEDDDAINEDKIVYIHAHKTGALL 200
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVD------VIGSPEMREKTGRD 238
A+++ G ++ G +E+E + +RN+G +GMA+Q+ +DI+D V+G P G D
Sbjct: 201 TAAVLIGAVLAGASEDEQQALRNYGSAIGMAFQVVDDILDVESETAVLGKP-----VGSD 255
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
K T+ L G++ +K A+E EA LA
Sbjct: 256 AEESKTTFVSLFGLESAKVKAEEYHQEAIAALA 288
>gi|289207601|ref|YP_003459667.1| polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
gi|288943232|gb|ADC70931.1| Polyprenyl synthetase [Thioalkalivibrio sp. K90mix]
Length = 297
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 160/296 (54%), Gaps = 28/296 (9%)
Query: 20 KALKAKQ--INEALDE---AVPLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQ 73
+ALKA Q I LD+ A P P ++ EAMRY +L GGKRL L A+ G
Sbjct: 8 EALKAYQRRIETVLDQRLAADSAPDPRLI-EAMRYATLSGGKRLRPVLVYAAGATCGAPD 66
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
V +MA A+E++ ++I DDLP +DNDDLRRG+P+ H+ F EATAILA AL A +
Sbjct: 67 DVLDAMAAAVEMVHVYSLIHDDLPAMDNDDLRRGRPTCHRAFDEATAILAGDALQACAFE 126
Query: 134 HIAIIKAKNINSAVGS---------------EGIAAGQIMDINSEGKEVSLSELNFIHRH 178
I + + G+ G+A GQ +D+ + GK + L+EL +HR
Sbjct: 127 ----IMTAGVRALPGTAALDALAELAHAAGLHGMAGGQAIDLGACGKPIDLAELERMHRL 182
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG I S+ G I GG + + + + + +G+A+Q+ +D++DV G PE+ K G
Sbjct: 183 KTGALIRVSVRLGAIAGGVPGDALGHLTRYAECIGLAFQIRDDVLDVEGDPEVLGKACGA 242
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
D DKAT+P L G++ S++ A L+ EA EL F A L L +IV N
Sbjct: 243 DARLDKATFPSLQGLEASRERAVALVDEALAELQPFG-QEADLLRFLARYIVDRMN 297
>gi|168184569|ref|ZP_02619233.1| geranyltranstransferase [Clostridium botulinum Bf]
gi|182672379|gb|EDT84340.1| geranyltranstransferase [Clostridium botulinum Bf]
Length = 290
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL+++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ ID
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSID 251
>gi|312134820|ref|YP_004002158.1| polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
gi|311774871|gb|ADQ04358.1| Polyprenyl synthetase [Caldicellulosiruptor owensensis OL]
Length = 299
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/294 (35%), Positives = 169/294 (57%), Gaps = 20/294 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
++ EY L K++ + LD + P I+++AMRYS GGKRL LC+ S +M +
Sbjct: 5 KLEEYINLSQKKVEKHLDGILKERSPEIIYQAMRYSVFAGGKRLRPLLCLLSYQMFSEDK 64
Query: 74 SV---AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ + +A AIEL+ T ++I DDLP +DND LRRGKP+NH +FGEA AILA AL L
Sbjct: 65 EIDQKILDIASAIELIHTYSLIHDDLPAMDNDVLRRGKPTNHVMFGEAIAILAGDALLNL 124
Query: 131 A----MQHI--------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNF-IHR 177
A M I I AK + A G EG+ GQ++DI + G+++ EL F +H
Sbjct: 125 AAEVCMDWILRYGCRENLIKAAKYLFWASGVEGMIGGQVIDITNSGQDIKNEELLFEMHL 184
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KT + I+AS V G ++ G + + + +GK +G+A+Q+ +D++DVIG S ++ + G
Sbjct: 185 KKTSRLIQASCVCGALVAGAEDRVVFDLEEYGKNLGLAFQIRDDVLDVIGDSKKVGKSIG 244
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+D+ K+T+ G++ +++ + +A + +D + L L N++++
Sbjct: 245 KDIKEKKSTFVTFYGLEKAQQLVEHYSQKAIDVIKKYDNSEL--LIELTNYLIN 296
>gi|304312212|ref|YP_003811810.1| polyprenyl synthetase [gamma proteobacterium HdN1]
gi|301797945|emb|CBL46167.1| Polyprenyl synthetase [gamma proteobacterium HdN1]
Length = 297
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 151/264 (57%), Gaps = 15/264 (5%)
Query: 41 AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCL 99
A L EAM Y+ + GGKRL L A+ E G S+A ACA+E+L + +++ DDLP +
Sbjct: 32 AKLSEAMHYAVMNGGKRLRPVLAFAAAEACGTDASLANDAACALEMLHSYSLVHDDLPAM 91
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI---------IKAKNINS---AV 147
DND LRRG P+ H F EATAILA AL CLA + +A IK + I S A
Sbjct: 92 DNDALRRGVPTCHIAFDEATAILAGDALQCLAFEVLASSELPSMTTPIKLEMIRSLAVAS 151
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+ G+A GQ +D+ + GK + L L IHR KTG I A++ G + E + +
Sbjct: 152 GTHGMAGGQALDLAASGKLLDLHGLETIHRLKTGCLIRAAVRLGALAAHAPESSLLALDQ 211
Query: 208 FGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+ +G+AYQ+ +DI+DV G + + ++ G D + DKATYP+++G+ ++ A L +A
Sbjct: 212 YASALGLAYQVQDDILDVTGDTLTLGKQQGADAVLDKATYPRILGLQAAQALATHLHDQA 271
Query: 267 KQELAYFDPTRAAPLDHLVNFIVS 290
Q + F A PL L ++IV+
Sbjct: 272 LQAIQGFGDG-ATPLRALASYIVN 294
>gi|237795298|ref|YP_002862850.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
gi|229262575|gb|ACQ53608.1| putative geranyltranstransferase [Clostridium botulinum Ba4 str.
657]
Length = 290
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL+++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELHYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ ID
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYSID 251
>gi|1229166|gb|AAB67731.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 222
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 149/223 (66%), Gaps = 17/223 (7%)
Query: 88 TMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK------ 141
T ++I DDLPC+DN DLRRGKP+NHKV+GE A+LA AL LA +H+ ++ +
Sbjct: 1 TSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPER 60
Query: 142 ------NINSAVGSEGIAAGQIMDINSEG---KEVSLSELNFIHRHKTGKFIEASIVSGV 192
+ A+G+ G+ AGQ++D+ SE +V L L FIH HKT +EA+ V GV
Sbjct: 61 MIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEAAAVLGV 120
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
I+GGG EEEIE++R + + +G+ +Q+ +DI+DV S E KT G+D+M K TYP+L+G
Sbjct: 121 IMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIG 180
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
++ SK+ A++L EA+++L FDP++AAPL L + I +F +N
Sbjct: 181 LERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASHI-AFRHN 222
>gi|408414645|ref|YP_006625352.1| geranyltranstransferase [Bordetella pertussis 18323]
gi|401776815|emb|CCJ62054.1| probable geranyltranstransferase [Bordetella pertussis 18323]
Length = 303
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 164/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ + LDE +P P LHEAMRY+ L GGKR+ + L A+ C + G + +V
Sbjct: 15 RAQHVEHVLDELLPGADIVPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A + A+ + A GS+G+A GQ +D++S G+ ++ EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
S+ G I+ G + + + ++ + +G+A+Q+ +DI+DV KT G+D +K
Sbjct: 195 ACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G++ ++ A+EL A Q LA + A L L +FIV
Sbjct: 255 PTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIV 299
>gi|337288952|ref|YP_004628424.1| Farnesyltranstransferase [Thermodesulfobacterium sp. OPB45]
gi|334902690|gb|AEH23496.1| Farnesyltranstransferase [Thermodesulfobacterium geofontis OPF15]
Length = 301
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 174/293 (59%), Gaps = 18/293 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIG 70
F + Y + K++ E L++ P + + A +YSL GGKR+ LC+ASCE++G
Sbjct: 6 FNLESYLKERGKKVEEILEKYFPKEEGYGKRVISAGKYSLFAGGKRIRPILCLASCEVVG 65
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
G + A IE + T ++I DDLPC+D+DD RRGKPS HK F EATAILA L L
Sbjct: 66 GDWRKILLFAAGIECIHTYSLIHDDLPCMDDDDFRRGKPSCHKAFDEATAILAGDGLQAL 125
Query: 131 AMQHIA------------IIKAKNINS-AVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A Q ++KA I S A+G EG+ GQ++D+ EGK+ + L +IH
Sbjct: 126 AFQFFTHPDLVRNVKKTKLLKAIYIISKAIGFEGMVGGQMVDLLMEGKKGNPRILKWIHL 185
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
+KT + IEAS++SG I+GG +E++ + ++GK +G A+Q+ +D++D++G ++ +KT
Sbjct: 186 NKTVRLIEASVLSGAILGGAKAKELKALSSYGKNLGFAFQIVDDLLDILGDEKKLGKKTF 245
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ + K TYP L GI+ +K+ AK +A L F+ + A PL + F++
Sbjct: 246 SDVKKQKLTYPSLFGIEKTKELAKRYTEKAISALQPFEKS-ALPLKAIAEFVL 297
>gi|398942446|ref|ZP_10670288.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM41(2012)]
gi|398160626|gb|EJM48891.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM41(2012)]
Length = 300
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 169/297 (56%), Gaps = 23/297 (7%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ + P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSE-----------------GIAAGQIMDINSEGKEVSLSELNFI 175
+ + N ++A+ S+ G+ GQ +D+ S G ++ L ++
Sbjct: 122 SALLDPRLSNSDAALTSDHLRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYM 181
Query: 176 HRHKTGKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MRE 233
HRHKTG IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + +
Sbjct: 182 HRHKTGALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGK 241
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+ G D+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV+
Sbjct: 242 RQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVT 297
>gi|170761674|ref|YP_001787211.1| geranyltranstransferase [Clostridium botulinum A3 str. Loch Maree]
gi|169408663|gb|ACA57074.1| putative geranyltranstransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 290
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMIYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEEALKACYTITKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|148544405|ref|YP_001271775.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|184153768|ref|YP_001842109.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227363170|ref|ZP_03847304.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|325682725|ref|ZP_08162241.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
gi|148531439|gb|ABQ83438.1| farnesyl-diphosphate synthase [Lactobacillus reuteri DSM 20016]
gi|183225112|dbj|BAG25629.1| geranyltranstransferase [Lactobacillus reuteri JCM 1112]
gi|227071776|gb|EEI10065.1| geranyltranstransferase [Lactobacillus reuteri MM2-3]
gi|324977075|gb|EGC14026.1| geranyltranstransferase [Lactobacillus reuteri MM4-1A]
Length = 290
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 146/240 (60%), Gaps = 12/240 (5%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPC 98
A L +AM YSL GGKRL L +A+ EM+GG+ + A A+ELL T ++I DDLP
Sbjct: 27 ATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------IKAK---NINSAVGS 149
+DNDDLRRGKP+NH FG A LA L +A Q +A I+++ + A G
Sbjct: 87 MDNDDLRRGKPTNHCKFGAGMATLAGDGLLTMAFQWVADNHLPANIRSQLTLELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI E + ++L++L ++HR KTG+ I ++++G I+ + E + + FG
Sbjct: 147 SGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+++D++DV+ + EM + +D K TYP L+G+DG+K+ + +A A Q
Sbjct: 207 ENYGLAFQIYDDLMDVLSTTEEMGKAVHKDADEQKNTYPGLLGVDGAKEQLQIALAAAGQ 266
>gi|422346488|ref|ZP_16427402.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
gi|373226033|gb|EHP48360.1| hypothetical protein HMPREF9476_01475 [Clostridium perfringens
WAL-14572]
Length = 290
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 149/232 (64%), Gaps = 13/232 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ +L+++M YS+ GGKR+ L + + + ++ A AIE++ T ++I DDLP
Sbjct: 24 YNKVLYDSMAYSINVGGKRIRPILMLLAYYIYKSDYKKILTPAMAIEMIHTYSLIHDDLP 83
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAV 147
C+DNDDLRRGKP+NHKVFGEA A+LA AL AM+ + A+ K I A
Sbjct: 84 CMDNDDLRRGKPTNHKVFGEAIAVLAGDALLNEAMKILVDYSLEEGRSALKATKIIADAA 143
Query: 148 GSEGIAAGQIMD-INSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS+G+ GQI+D IN + +E+SL EL+++H KTG+ I+ASI+SG ++ +E +I+++
Sbjct: 144 GSDGMIGGQIVDIINEDKEEISLKELDYMHLKKTGELIKASIMSGAVLAEASEGDIKKLE 203
Query: 207 NFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKK 257
+FG +G+A+Q+ +DI+DV+G + ++ + +D +K Y + G++ KK
Sbjct: 204 DFGYKLGLAFQIKDDILDVVGNAKDLGKNVHKDQESNKNNYITIFGLEECKK 255
>gi|365157809|ref|ZP_09354054.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
gi|363622479|gb|EHL73638.1| hypothetical protein HMPREF1015_00214 [Bacillus smithii 7_3_47FAA]
Length = 295
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 150/250 (60%), Gaps = 12/250 (4%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKR+ L A+ G M A A+E++ T ++I DD
Sbjct: 28 LDSPPVLKEAMDYSLQAGGKRIRPVLLFAAINSFGKDPERGMDAAAALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINS 145
LP +D+DDLRRGKP+NHKV+GEA AILA AL A Q IA + + +
Sbjct: 88 LPSMDDDDLRRGKPTNHKVYGEANAILAGDALLTYAFQIIAQSPDLSEKEKVAIIEQLAK 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
A G EG+ AGQ+ D+ E K ++L EL +HR+KTG+ I S+ +G +IGG E E+
Sbjct: 148 AAGPEGMVAGQVADMEGEKKALTLEELEAVHRNKTGRLIAFSVRAGALIGGATEAELAVF 207
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+ ++G+A+Q+ +DI+D++GS E + ++ G D+ K TYP L+ + G+++ KE +
Sbjct: 208 EKYAYHIGIAFQIQDDILDIVGSEEKLGKRVGSDIANHKNTYPALLTVRGAREKLKEHVD 267
Query: 265 EAKQELAYFD 274
+A +EL D
Sbjct: 268 QAIEELNRLD 277
>gi|153939221|ref|YP_001391205.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
gi|152935117|gb|ABS40615.1| geranyltranstransferase [Clostridium botulinum F str. Langeland]
Length = 290
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|389809734|ref|ZP_10205456.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
gi|388441633|gb|EIL97895.1| farnesyl-diphosphate synthase [Rhodanobacter thiooxydans LCS2]
Length = 299
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 155/281 (55%), Gaps = 21/281 (7%)
Query: 25 KQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++ +ALD +P P LH AMRY+ L GGKRL L A+ +G + AC
Sbjct: 16 ERAEQALDRHLPPAGQSPTELHRAMRYAVLGGGKRLRPLLVYATAHALGEDGPQLDAAAC 75
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
A+EL+ +++ DDLP +D+D LRRG+P+ H VFGEA AILA AL LA +A A+
Sbjct: 76 AVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDALQALAFGILAEDAAR 135
Query: 142 NINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
++A G+EG+A GQ +D+ + G+ ++L EL +H KTG I AS+
Sbjct: 136 RTDAATGIAMLRALGHACGAEGMAGGQALDLAAVGQTLTLGELEHMHACKTGALIRASVQ 195
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
G + G +E ++ + + VG+A+Q+ +DI+DV G + KT G+D K T+P
Sbjct: 196 LGALAAGTDEGTLQALDRYAHAVGLAFQVRDDILDVEGESAVIGKTAGKDAAAAKPTFPS 255
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNF 287
++G+D S+ EL A LA F P RA L+ L +
Sbjct: 256 IIGLDASRARLAELTDTA---LAAFAPLGDRAVLLEELARY 293
>gi|398852079|ref|ZP_10608748.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
gi|398244955|gb|EJN30487.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM80]
Length = 295
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 164/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEA--VPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYTATSQGRVNAALETLFNAPLPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + +S A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSDCSSDIRLQMVTALAQAAGPAGMVGGQAIDLGSVGLKLDQKALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IE S+ G + G E +E+ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEPDELRALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>gi|33593755|ref|NP_881399.1| geranyltranstransferase [Bordetella pertussis Tohama I]
gi|384205043|ref|YP_005590782.1| geranyltranstransferase [Bordetella pertussis CS]
gi|410420906|ref|YP_006901355.1| geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|427824861|ref|ZP_18991923.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
gi|33563828|emb|CAE43072.1| probable geranyltranstransferase [Bordetella pertussis Tohama I]
gi|332383157|gb|AEE68004.1| geranyltranstransferase [Bordetella pertussis CS]
gi|408448201|emb|CCJ59882.1| probable geranyltranstransferase [Bordetella bronchiseptica MO149]
gi|410590126|emb|CCN05205.1| probable geranyltranstransferase [Bordetella bronchiseptica Bbr77]
Length = 303
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 164/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ + LDE +P P LHEAMRY+ L GGKR+ + L A+ C + G + +V
Sbjct: 15 RAQHVEHVLDELLPGADIAPTRLHEAMRYAVLGGGKRVRAALVYAAGQACPVNGSTLAVG 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTVHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A + A+ + A GS+G+A GQ +D++S G+ ++ EL +H KTG +
Sbjct: 135 LLAGMPIAPALVVQAAQVLARAAGSQGMAGGQAIDLHSVGRMLTRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
S+ G I+ G + + + ++ + +G+A+Q+ +DI+DV KT G+D +K
Sbjct: 195 ACSVTLGGIVAGASSTARQALDSYAQAIGLAFQVVDDILDVTADTASLGKTAGKDAADNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G++ ++ A+EL A Q LA + A L L +FIV
Sbjct: 255 PTYVSLLGLEQARALAQELRQAAHQALAPLGES-GARLGQLADFIV 299
>gi|374639383|gb|AEZ55680.1| geranyl diphosphate synthase small subunit type II.2 [Salvia
miltiorrhiza]
Length = 331
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 164/291 (56%), Gaps = 26/291 (8%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGG 71
F + Y K+I++ LDEA+P+ +P ++EAMRYS+ G KR +C+A+CE+ GG
Sbjct: 38 FDLKTYWTSLIKEIDQKLDEAIPVKYPQQIYEAMRYSVLAKGAKRAPPVMCVAACEIFGG 97
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
++ A ACA+E++ + ++I DDLPC+D+D RRG+PSNH VFG AILA AL L
Sbjct: 98 NRLAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFPLG 157
Query: 132 MQHIAIIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+HI + I AVGS G+AAGQ +D+ V L +
Sbjct: 158 FRHIVSHTPTDLVPHTRLLRVIAEIARAVGSTGMAAGQFLDLEGGPNAVDL-----VQEK 212
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
K G+ + S V G ++ G +++EIE +R +G+ VG+ Y++ +DI + P+ ++K+
Sbjct: 213 KFGEMGQCSAVCGGLLAGASDDEIEHLRKYGRAVGILYEVVDDIRETKLQPDEKDKS--- 269
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNF 287
+Y + G++ + + A++L ++AK+EL + + PL V++
Sbjct: 270 -KSKGKSYVSVYGVEKAMEVAEDLRSQAKKELESLEKYGDKVLPLYSFVDY 319
>gi|392987381|ref|YP_006485974.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
gi|392334801|gb|AFM69083.1| octaprenyl-diphosphate synthase/ dimethylallyltransferase/
geranyltranstransferase [Enterococcus hirae ATCC 9790]
Length = 294
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 153/253 (60%), Gaps = 23/253 (9%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCLD 100
L E+M YS+ GGKR+ L +++ G S + +A A+E++ T ++I DDLP +D
Sbjct: 31 LKESMLYSVRAGGKRIRPLLLLSTVAAFGESINTTTYQVAAALEMIHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA------IIKAKNINSAVGS 149
NDDLRRGKP+NHKV+GEA AILA A ++M H+A +++ IN+ G+
Sbjct: 91 NDDLRRGKPTNHKVYGEALAILAGDGLLTGAFQLISMAHLANSPKLLLLQQLAINA--GT 148
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
+G+ AGQ DI E K+++L EL FIH KTG+ + ++++G ++ EE + ++
Sbjct: 149 QGMVAGQAADIEGETKQLTLEELMFIHERKTGRLMHYALLAGGVLANQPEEVLASLQKLA 208
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKE 261
++G+A+Q+ +D++DV+ + E+ KT G+D +K TYP L+GI+ +K A
Sbjct: 209 SHLGLAFQIRDDLLDVVSTTEVLGKTAGKDAKMEKTTYPGLLGIEETKSALENEIDAANR 268
Query: 262 LIAEAKQELAYFD 274
+I + +Q + FD
Sbjct: 269 MIDQLEQTVCSFD 281
>gi|383784947|ref|YP_005469517.1| geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
gi|383083860|dbj|BAM07387.1| putative geranyltranstransferase [Leptospirillum ferrooxidans C2-3]
Length = 307
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 139/234 (59%), Gaps = 15/234 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+MRYSL GGKR+ L +A+ +G + + +EL+ T ++I DDLP +DN
Sbjct: 43 LSESMRYSLLAGGKRIRPILSMAALSSVGHDPEPYIPLLLPLELIHTYSLIHDDLPAMDN 102
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHC-------------LAMQHIAIIKAKNINSAVG 148
DDLRRGKP+NH VFG+ATAILA AL L+ + + + + ++ G
Sbjct: 103 DDLRRGKPTNHVVFGDATAILAGDALLTYAFTILSDPRYDELSSEKVRLAVVRELSHGSG 162
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ++D+ SEG+ +SL +L F+HRHKTG I +S+ G ++G E + +
Sbjct: 163 LAGMVGGQMLDMESEGRRISLEDLEFLHRHKTGALILSSVRIGALLGEAGASEFNSLDQY 222
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMRDKATYPKLVGIDGSKKHAKE 261
G+ VG+A+Q+ +D++DV G K +D K TYP L+GIDG+KK AKE
Sbjct: 223 GESVGVAFQIADDLLDVEGDAATLGKAAQKDNNHLKNTYPALLGIDGAKKMAKE 276
>gi|297569005|ref|YP_003690349.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
gi|296924920|gb|ADH85730.1| Geranyltranstransferase [Desulfurivibrio alkaliphilus AHT2]
Length = 296
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 170/292 (58%), Gaps = 18/292 (6%)
Query: 16 VNEYKALKAKQINEALDEAVP-LPHPAILH-EAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ +Y + +++ +ALD+ +P + P H EAMRYSL GGKR+ LC+A+ E +
Sbjct: 3 IKQYLNHRCQEVEQALDQLLPPIEGPLAGHVEAMRYSLLAGGKRIRPILCLAAAEALPTD 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ +A A+E + T ++I DDLP +D+DDLRRG P+ HK FGEA AILA L A
Sbjct: 63 SRPLLPVAAALECIHTYSLIHDDLPAMDDDDLRRGNPTCHKKFGEAAAILAGDGLLSFAF 122
Query: 133 QHIAIIKAK-------------NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ +A A NI +A+G G+ GQ++DI +EG+++ L +L IHR K
Sbjct: 123 ELLARPLATKNISAGEQLHLIGNIAAAIGPMGMVGGQVLDIEAEGRQIELEQLQQIHRCK 182
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
TG I ++ SG I GG + + E + ++G+ +G+A+Q+ +D+++V G S + + G D
Sbjct: 183 TGALITVAVQSGAIGGGADRRQYEALTSYGEQIGLAFQIVDDLLNVTGDSTTLGKAAGSD 242
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
R KATYP L+G++ +++ A E +A A L F A PL L +I +
Sbjct: 243 AARGKATYPALLGLEATRRQADEAVAGAITALNGFG-EEAEPLRELARYIAA 293
>gi|422422024|ref|ZP_16498977.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
gi|313638049|gb|EFS03327.1| geranyltranstransferase [Listeria seeligeri FSL S4-171]
Length = 293
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 146/241 (60%), Gaps = 12/241 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + +A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALQADPMRGVKVATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKV+G+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ D+ +E K+V+L+EL IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K E ++ AK L
Sbjct: 212 IGVGFQISDDILDVIGDETKMGKKTGGDAFMNKSTYPGLLTLDGAKSALNEHVSIAKSAL 271
Query: 271 A 271
+
Sbjct: 272 S 272
>gi|206602067|gb|EDZ38549.1| Geranyltranstransferase [Leptospirillum sp. Group II '5-way CG']
Length = 303
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 154/266 (57%), Gaps = 16/266 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+MRYSL GGKR+ L +A+ E + + + +EL+ T ++I DDLP +D+
Sbjct: 39 LAESMRYSLLAGGKRIRPVLAMAAMEALDRDPIPCIPLLAPLELIHTYSLIHDDLPSMDD 98
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI----------IKAKNINS---AVG 148
D LRRGKP+NH ++G+ATAILA AL A ++ I+ K I+ G
Sbjct: 99 DSLRRGKPTNHVIYGDATAILAGDALLTHAFTLLSDPDYDKLVSFEIRLKIIHELSVGAG 158
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
G+ GQ MDI SEGK ++LS L F+H+HKTG I AS+ G ++G + + ER+ +
Sbjct: 159 INGMVGGQQMDIASEGKALNLSSLEFLHQHKTGALIRASLRIGALLGKASSSDFERLDRY 218
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKTG-RDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ VG+A+Q+ +D++DV G + K +D R K TYP L+G++ ++ A+ + EA
Sbjct: 219 GQAVGIAFQIADDLLDVEGDAALLGKAAQKDQDRHKNTYPGLMGVEKARNMARHKLNEAL 278
Query: 268 QELAYFDPTRAAPLDHLVNFIVSFGN 293
+ + F +A L L ++I+ N
Sbjct: 279 EAIGSFG-EKAKHLRELASYIIERRN 303
>gi|402310269|ref|ZP_10829235.1| polyprenyl synthetase [Eubacterium sp. AS15]
gi|400368721|gb|EJP21728.1| polyprenyl synthetase [Eubacterium sp. AS15]
Length = 295
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 158/289 (54%), Gaps = 18/289 (6%)
Query: 20 KALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
K + + I + +D + L + + E+M YSL GGKRL L I + ++ +
Sbjct: 11 KEIVERHIKKIMD--IKLGYSQKIIESMSYSLLGGGKRLRPVLFIETLKLFDIDFEQYLD 68
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
+AC +E++ T ++I DDLP +DNDDLRRGKP+NH V+GE AILA +L L+ + +
Sbjct: 69 IACILEMIHTYSLIHDDLPAMDNDDLRRGKPTNHIVYGEDVAILAGDSLLNLSYEILFDF 128
Query: 139 KAKN-----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
KN I+ G G+ GQ+ D+ +E KE+ + L +IH +KT K I AS
Sbjct: 129 LYKNSSPNNILACRLISKNAGIFGMIGGQVSDVINENKEIDIENLKYIHYNKTAKLIMAS 188
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATY 246
I+S I ++E I + ++ +GMA+Q+ +DI+DV+G E+ K+ G+D K TY
Sbjct: 189 ILSAAYISDCSKEYITYLESYAYNIGMAFQISDDILDVVGDKEIVGKSIGKDEQYGKNTY 248
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNNN 295
PK G++ SK K I AK+E+ D L +++ GN N
Sbjct: 249 PKYFGLEESKIKLKNYIDNAKREILKIDSKNIEFFVELADYV---GNRN 294
>gi|291532853|emb|CBL05966.1| farnesyl-diphosphate synthase [Megamonas hypermegale ART12/1]
Length = 292
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 158/278 (56%), Gaps = 15/278 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
+Q+NE E + L L +AM YSL GGKRL L +A+ + +G + ++ +I
Sbjct: 15 QQLNEIYTENMALNKD--LAKAMNYSLMAGGKRLRPILIMAAADALGVDGEKFLRLSTSI 72
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK---- 139
E + T ++I DDLP +DNDD RRGK +NHKVFGEA AILA AL +A + IA K
Sbjct: 73 EFIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGEALAILAGDALLTMAFEIIATDKNVDA 132
Query: 140 ------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++ A G+EG+ GQ++D+ SE K++ + L +H KTG A+I SG I
Sbjct: 133 ETKIKIITEMSKAAGAEGMVGGQVIDMQSENKKIDIQTLKQMHAAKTGALFCAAIRSGAI 192
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGI 252
+ G +E+++ + + + G+A+Q+ +DI+DV+G + K G D K+TY L +
Sbjct: 193 LAGADEKQLANLTEYARQFGLAFQITDDILDVVGDEKTIGKPVGSDEKNHKSTYVTLGSL 252
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+K A+E + +AK L F A L LV+++++
Sbjct: 253 GSAKALAQEAVDKAKASLVDFGEN-AEFLRALVDYLIT 289
>gi|325578412|ref|ZP_08148547.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
gi|325160148|gb|EGC72277.1| geranyltranstransferase [Haemophilus parainfluenzae ATCC 33392]
Length = 297
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ A L +AM+Y L GGKR+ L A+ +M+G S A AIE + ++I DDLP
Sbjct: 30 YNAHLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINS 145
+DND+LRRG+P+ H F EATAILA AL A Q + ++K +
Sbjct: 90 AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPSLSAEQKLQLVKV--LAQ 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG--NEEEIE 203
A G +G+ GQ +D+ SE K+V+L EL IHR+KTG + A++ G I N+E +
Sbjct: 148 ASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQ 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ + + +G+A+Q+ +DI+D+ G S E+ + G D+ DK+TYPKL+G++G+K+ A+EL
Sbjct: 208 QLERYSQTIGLAFQVQDDILDIEGDSAEIGKPVGSDLGLDKSTYPKLLGLEGAKQKAQEL 267
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FIV+
Sbjct: 268 YQTALHELDNL-PFDTTALRALAEFIVN 294
>gi|429205318|ref|ZP_19196595.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
gi|428146390|gb|EKW98629.1| geranyltranstransferase [Lactobacillus saerimneri 30a]
Length = 294
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 158/279 (56%), Gaps = 13/279 (4%)
Query: 26 QINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ-SVAMSMACA 82
Q+ +A+D+ + L P+ L EAMRYSL GGKR+ L +A E G + + +A
Sbjct: 14 QLEQAMDQYLATLQAPSKLKEAMRYSLDAGGKRIRPLLTLAFKEYFTGEVVTTDIDVAAC 73
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK--- 139
IE++ T ++I DDLP +DNDDLRRGKP+NHKVFG+A A+LA L A + + I
Sbjct: 74 IEMIHTYSLIHDDLPEMDNDDLRRGKPTNHKVFGQAMAVLAGDGLLTTAFERLTTISLAP 133
Query: 140 ------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ A G++G+ GQ+ DI E K+++L+EL +H KTG ++ + +G I
Sbjct: 134 AVIVELTHKLALAAGAQGMVGGQVGDILGEQKQLTLAELQMVHEGKTGALLQYACEAGAI 193
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGI 252
+ E + +FG G+A+Q+++DI DV+ + +M +K +D +K TYP L+G+
Sbjct: 194 LAAQPPTVKEIVAHFGLNFGLAFQIYDDIQDVVSTTAKMGKKVHKDQAHNKNTYPGLLGL 253
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSF 291
G+++H +++A + +L + L F+ F
Sbjct: 254 AGAQEHLTKMVAICRSDLLQLEQIMGQEPSTLNEFLEYF 292
>gi|289434644|ref|YP_003464516.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170888|emb|CBH27430.1| geranyltranstransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 293
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 147/241 (60%), Gaps = 12/241 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + +A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALQVDPMSGVKVATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKV+G+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIGLINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ D+ +E K+V+L+EL IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP+L+ +DG+K E I+ AK L
Sbjct: 212 IGVGFQISDDILDVIGDETKMGKKTGVDAFMNKSTYPELLTLDGAKSALNEHISIAKSAL 271
Query: 271 A 271
+
Sbjct: 272 S 272
>gi|85711191|ref|ZP_01042251.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
gi|85695104|gb|EAQ33042.1| Geranylgeranyl pyrophosphate synthase [Idiomarina baltica OS145]
Length = 295
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 140/230 (60%), Gaps = 15/230 (6%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAM Y L GGKR+ L +A E+ G + A+ ACA+EL+ ++I DDLP +D+
Sbjct: 31 LKEAMAYGVLLGGKRIRPYLTMAVAELCGAETNDALDAACAVELIHAYSLIHDDLPAMDD 90
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKAKNINSAVGS 149
D+LRRG P+ H FGEATA+LA AL LA + ++ I +++ SA G+
Sbjct: 91 DELRRGHPTCHIKFGEATAVLAGDALQTLAFEVLSTNLETKLSSQRRIAMIQHLASASGA 150
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEE-IERMRNF 208
+G+ GQ +D+++ G+ + EL IHRHKTG I AS GV+ G ++ ++ +F
Sbjct: 151 KGMCFGQALDLDATGRAIDELELEKIHRHKTGALIRASAALGVLAGNDESQQYLDHFCDF 210
Query: 209 GKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKK 257
++G+AYQ+++DI+DV+G+ E M + G D KATY L+G+DG+ +
Sbjct: 211 ASWIGLAYQVYDDILDVVGNTEVMGKPQGSDEAHHKATYVALLGLDGASE 260
>gi|398969622|ref|ZP_10682972.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
gi|398141759|gb|EJM30670.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM30]
Length = 295
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 166/295 (56%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALD--EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP + L+EAM YS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALEILFKAPLPELSRLYEAMHYSVMIGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + N+++ A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSNLDADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQQALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G ++E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEQDELKALQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AEPLRDLARYIVERRN 295
>gi|345430245|ref|YP_004823365.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
gi|301156308|emb|CBW15779.1| geranyltranstransferase [Haemophilus parainfluenzae T3T1]
Length = 297
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ A L +AM+Y L GGKR+ L A+ +M+G S A AIE + ++I DDLP
Sbjct: 30 YNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAEMSALDYAAAAIESIHAYSLIHDDLP 89
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINS 145
+DND+LRRG+P+ H F EATAILA AL A Q + ++K +
Sbjct: 90 AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTEAPSLSAEQKLQLVKV--LAQ 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG--NEEEIE 203
A G +G+ GQ +D+ SE K+V+L EL IHR+KTG + A++ G I N+E +
Sbjct: 148 ASGVQGMCLGQSLDLISEHKQVNLDELELIHRNKTGALLTAALKLGFICSPHFENKELEQ 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ + + +G+A+Q+ +DI+D+ G S E+ + G D+ DK+TYPKL+G++G+K+ A+EL
Sbjct: 208 QLERYSQAIGLAFQVQDDILDIEGNSAEIGKPVGSDLDLDKSTYPKLLGLEGAKQKAQEL 267
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FIV+
Sbjct: 268 YHTALHELDNL-PFDTTALRALAEFIVN 294
>gi|402815138|ref|ZP_10864731.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
gi|402507509|gb|EJW18031.1| farnesyl diphosphate synthase [Paenibacillus alvei DSM 29]
Length = 307
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 146/266 (54%), Gaps = 25/266 (9%)
Query: 25 KQINEALDEAVP--------LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
KQ E ++ +P +P P L ++M YSL GGKRL + +C+ + G+
Sbjct: 18 KQQAERIESKLPKMLESQRIVPEP--LTQSMLYSLMAGGKRLRPICVLMACDSLNGNTQA 75
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ-- 133
A +ACA+E++ T +++ DDLP +DNDD RRGKP+NHKVFGEA AILA L A Q
Sbjct: 76 AEPVACAVEMIHTYSLVHDDLPAMDNDDFRRGKPTNHKVFGEAMAILAGDGLLTRAFQCI 135
Query: 134 -----------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+++ + + G G+ GQ D+ E +L +L +IH HKT
Sbjct: 136 VQSTRKHGVPADVSLSIVEELAEFAGMSGMVGGQAADMLGEQGITTLDQLEYIHMHKTSD 195
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMR 241
I S+ SG I G +E +++ + +G +G+A+Q+ +D++D+IG M K G D+
Sbjct: 196 LIVFSLRSGGRIAGASELQLQALTTYGSKLGLAFQIQDDVLDIIGDETMLGKPKGSDVKS 255
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAK 267
K TYP +G++ SK+ + L EAK
Sbjct: 256 GKVTYPYFIGLEESKREVERLTEEAK 281
>gi|264679659|ref|YP_003279566.1| polyprenyl synthetase [Comamonas testosteroni CNB-2]
gi|262210172|gb|ACY34270.1| Polyprenyl synthetase [Comamonas testosteroni CNB-2]
Length = 324
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 158/278 (56%), Gaps = 14/278 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
+ +AL V + PA L EAMRY+ L GGKRL L A+ E +GG + + CA+E
Sbjct: 43 RTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVE 102
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------A 136
L+ +++ DD+PC+DND +RRGKP+ H FGEA+A+LA AL LA + +
Sbjct: 103 LIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPC 162
Query: 137 IIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++AK + +A GS+G+A GQ +D+ S GK +S ++L +HR KTG + S++ G
Sbjct: 163 SMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKHLSEAQLREMHRLKTGALLLGSVLMGAA 222
Query: 194 IGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+ + + ++G+ +G+A+Q+ +DI+DV+ KT G+D DK T+ L+G
Sbjct: 223 CNAQTDARALAALTDYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLG 282
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++ ++ HA++L +A L L L + +V
Sbjct: 283 LEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVV 320
>gi|194466515|ref|ZP_03072502.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
gi|194453551|gb|EDX42448.1| Polyprenyl synthetase [Lactobacillus reuteri 100-23]
Length = 290
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 145/240 (60%), Gaps = 12/240 (5%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPC 98
A L +AM YSL GGKRL L +A+ EM+GG+ + A A+ELL T ++I DDLP
Sbjct: 27 ATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTINDDLLRAASALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------IKAK---NINSAVGS 149
+DNDDLRRGKP+NH FG A LA L LA Q +A ++++ + A G
Sbjct: 87 MDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLPANVRSQLTLELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI E + ++L++L ++HR KTG+ I ++++G I+ + E + + FG
Sbjct: 147 SGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+++D++D++ + EM + +D K TYP L+G+DG+K+ + + A Q
Sbjct: 207 ENYGLAFQIYDDLMDILSTTEEMGKAVHKDADEQKNTYPGLLGVDGAKEQLQIALTAASQ 266
>gi|423335561|ref|ZP_17313336.1| geranyltranstransferase [Lactobacillus reuteri ATCC 53608]
gi|337728791|emb|CCC03910.1| geranyltranstransferase [Lactobacillus reuteri ATCC 53608]
Length = 290
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 145/240 (60%), Gaps = 12/240 (5%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPC 98
A L +AM YSL GGKRL L +A+ EM+GG+ + A A+ELL T ++I DDLP
Sbjct: 27 ATLRDAMNYSLMAGGKRLRPALTLATIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------IKAK---NINSAVGS 149
+DNDDLRRGKP+NH FG A LA L LA Q +A ++++ + A G
Sbjct: 87 MDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLPANVRSQLTLELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI E + ++L++L ++HR KTG+ I ++++G I+ + E + + FG
Sbjct: 147 SGMVAGQARDIEGEHQHLTLNQLRYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+++D++D++ + EM + +D K TYP L+G+DG+K+ + + A Q
Sbjct: 207 ENYGLAFQIYDDLMDILSTTEEMGKAVHKDADEQKNTYPGLLGVDGAKEQLQIALTAASQ 266
>gi|429246185|ref|ZP_19209527.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
gi|428756789|gb|EKX79319.1| geranyltranstransferase [Clostridium botulinum CFSAN001628]
Length = 290
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 137/223 (61%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K ++L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|169828970|ref|YP_001699128.1| geranyltranstransferase [Lysinibacillus sphaericus C3-41]
gi|168993458|gb|ACA40998.1| Geranyltranstransferase [Lysinibacillus sphaericus C3-41]
Length = 293
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L ++M YSL GGKR+ +A E+ + + + IE++ T ++I DDLP
Sbjct: 30 PVDLKDSMLYSLKAGGKRIRPLFVLAVLELYRKNLQDGLIVGAVIEIIHTYSLIHDDLPS 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---IIKAKNI------NSAVGS 149
+DNDD RRGKP+NHKV+GEA A LA AL+ LA +A + K I + A G+
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILARMDVTAEKRIELVQLLSVAAGA 149
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ E +++ L+EL +H +KTG + SI +G ++ ++++ ++ +
Sbjct: 150 EGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYA 209
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ +DG+K+ E A
Sbjct: 210 HHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLDGAKEKLAEHYQHAIN 269
Query: 269 ELAYFDPTRAAPLDHLVNFIVSFGN 293
L P A+ L +IV N
Sbjct: 270 ALDQL-PIDASLLRDFAAYIVHRKN 293
>gi|254787182|ref|YP_003074611.1| geranyltranstransferase [Teredinibacter turnerae T7901]
gi|237687258|gb|ACR14522.1| geranyltranstransferase [Teredinibacter turnerae T7901]
Length = 295
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 21/282 (7%)
Query: 26 QINEALDEAVPLPHPA-----ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM 79
Q+N L+ HPA + EAMRYSL GGKR+ TL A+ + ++
Sbjct: 15 QVNRCLE---GWTHPADAVAPRVTEAMRYSLMNGGKRIRPTLVYAAARAVSVPNEATLAG 71
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK 139
A A+E + ++I DDLP +DNDDLRRGKP+ H F EATAILA L LA + ++ I+
Sbjct: 72 AGAVECIHAYSLIHDDLPAMDNDDLRRGKPTCHIAFDEATAILAGDGLQTLAFEKLSTIE 131
Query: 140 --------AKNINSAVGSEGIAAGQIMDINSEG--KEVSLSELNFIHRHKTGKFIEASIV 189
+ + A G +G+ AGQ++D+ SEG + ++S L IHRHKTG I A+++
Sbjct: 132 DPATAVAMIRTLALASGDKGMVAGQMIDMESEGLQQAFTISHLEKIHRHKTGALIRAAVL 191
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPK 248
G ++E+ + + + +G+A+Q+ +DI+DVI + + ++ G D+ +KATY
Sbjct: 192 MGARSVQASQEQTQSLIRYADAIGLAFQVQDDILDVISDTATLGKRQGADLEHEKATYVS 251
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
L+G+ +++ A++L A A L F + A PL + ++IV+
Sbjct: 252 LLGLREAREKARDLHATALSSLQSF-ASSADPLRWVADYIVT 292
>gi|163857373|ref|YP_001631671.1| geranyltranstransferase [Bordetella petrii DSM 12804]
gi|163261101|emb|CAP43403.1| probable geranyltranstransferase [Bordetella petrii]
Length = 303
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 164/286 (57%), Gaps = 20/286 (6%)
Query: 23 KAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSVA 76
+A+ I LDE +P PA LHEAMRY+ L GGKR+ + L A+ C + G + ++
Sbjct: 15 RAQHIEAVLDECLPAADALPARLHEAMRYAVLGGGKRIRAALVYAAGQACPVNGSAVAIQ 74
Query: 77 MSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
SM A A+EL+ ++I DDLPC+D+D LRRG+P+ H F EATA+LA AL LA +
Sbjct: 75 ASMDRAAAAVELIHAYSLIHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAFE 134
Query: 134 HIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+A +++A + + A GS G+A GQ +D++S G+ +S EL +H KTG +
Sbjct: 135 LLADMPIAPALVVQATQALARAAGSLGMAGGQAIDLHSVGQALSRDELQTMHSMKTGAML 194
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDK 243
S+ G I+ G + + + ++ + VG+A+Q+ +DI+DV S + + G+D +K
Sbjct: 195 ACSVALGGIVSGASSSTRQALDDYAQAVGLAFQVVDDILDVTADSASLGKTPGKDAAGNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY L+G+D ++ A+EL A L + L L ++IV
Sbjct: 255 PTYVSLLGLDDARALAEELRGAAHAALTPLGDA-GSTLARLADYIV 299
>gi|311105029|ref|YP_003977882.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
gi|310759718|gb|ADP15167.1| geranyltranstransferase [Achromobacter xylosoxidans A8]
Length = 303
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 166/291 (57%), Gaps = 20/291 (6%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGG 71
E+ + + + + LD+ +P P+ LHEAMRY+ L GGKR+ + L A+ C + G
Sbjct: 10 EWLQGRVQHVEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGS 69
Query: 72 SQSVAMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+V S+ A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL
Sbjct: 70 VLAVQASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVKFDEATAMLAGDALQ 129
Query: 129 CLAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA +A I++A +++ A GS+G+A GQ +D+ S G +S EL +H K
Sbjct: 130 PLAFDLLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGHALSRDELQTMHSMK 189
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
TG + S+ G I+ G + + + + + VG+A+Q+ +DI+DV S + + G+D
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSTSLGKTPGKD 249
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+K TY L+G+DG++ A+EL +A LA + L L +FIV
Sbjct: 250 AAENKPTYVSLLGLDGARAFAQELREDALAALAPLGEA-GSRLAELADFIV 299
>gi|418531677|ref|ZP_13097588.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
gi|371451179|gb|EHN64220.1| polyprenyl synthetase [Comamonas testosteroni ATCC 11996]
Length = 309
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 158/278 (56%), Gaps = 14/278 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
+ +AL V + PA L EAMRY+ L GGKRL L A+ E +GG + + CA+E
Sbjct: 28 RTEDALSRWVGINAPAGLGEAMRYAVLDGGKRLRPLLVWAAAEAVGGLAAATLRAGCAVE 87
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------A 136
L+ +++ DD+PC+DND +RRGKP+ H FGEA+A+LA AL LA + +
Sbjct: 88 LIHAYSLVHDDMPCMDNDTMRRGKPTVHVQFGEASALLAGDALQALAFELLLPEDDGIPC 147
Query: 137 IIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
++AK + +A GS+G+A GQ +D+ S GK++S ++L +HR KTG + S++ G
Sbjct: 148 SMQAKLCRLLGAAAGSQGMAGGQAIDLASVGKQLSEAQLREMHRLKTGALLLGSVLMGAA 207
Query: 194 IGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
+ + + +G+ +G+A+Q+ +DI+DV+ KT G+D DK T+ L+G
Sbjct: 208 CNAQTDVRALAALTVYGQALGVAFQVVDDILDVVADSATLGKTAGKDAANDKPTFVSLLG 267
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
++ ++ HA++L +A L L L + +V
Sbjct: 268 LEAARAHAEQLRQQAHAALTRSGLADTQALGALADMVV 305
>gi|184155736|ref|YP_001844076.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227515672|ref|ZP_03945721.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260663547|ref|ZP_05864437.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
gi|183227080|dbj|BAG27596.1| geranyltranstransferase [Lactobacillus fermentum IFO 3956]
gi|227085975|gb|EEI21287.1| geranyltranstransferase [Lactobacillus fermentum ATCC 14931]
gi|260552088|gb|EEX25141.1| geranyltranstransferase [Lactobacillus fermentum 28-3-CHN]
Length = 291
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 145/238 (60%), Gaps = 12/238 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCL 99
+L ++M YSL GGKRL TL IA E++G + + ACA+EL+ T ++I DDLP +
Sbjct: 28 LLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAM 87
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--IIKA-------KNINSAVGSE 150
DNDDLRRGKP+NH+V+G A LA L LA + ++ +KA + + A G
Sbjct: 88 DNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLKAPVRLRLVQELAKAAGPA 147
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ AGQ D+++ G+E+SL++L +HR KTG + ++++G +I ++ + FG+
Sbjct: 148 GMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFGE 207
Query: 211 YVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+A+Q+++DI+DV + EM + T +D K TYP L+G+ G+K + + A+
Sbjct: 208 AYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAKGELEAALTTAR 265
>gi|71908673|ref|YP_286260.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
gi|71848294|gb|AAZ47790.1| farnesyl-diphosphate synthase [Dechloromonas aromatica RCB]
Length = 297
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 159/288 (55%), Gaps = 20/288 (6%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQS 74
E+ A+ + AL +P P PA LHEAMRY +L GGKR+ L A+ E+ G +
Sbjct: 8 EWMAVTQDRAESALGRFLPGPDCIPARLHEAMRYATLGGGKRVRPLLAHAAGELTGATPE 67
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM-- 132
+ CA+E++ +++ DDLPC+D+D LRRG+P+ H F E TA+L +L +A
Sbjct: 68 ALDIVGCAVEMIHAYSLVHDDLPCMDDDVLRRGRPTCHVEFDEPTALLVGDSLQTMAFEL 127
Query: 133 ----------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
Q + II + A GS G+A GQ +D+ S GK ++ EL +H KTG
Sbjct: 128 LASQPLGEPKQQLEIIAL--LAHASGSRGMAGGQAIDLASVGKPLTQPELELMHALKTGA 185
Query: 183 FIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
I A+++ G + G + +E + F K G+ +Q+ +DI+D S KT G+D
Sbjct: 186 LIRAAVLLGALAGQPLSADERTSLDRFAKRAGLLFQVVDDILDCTASTATLGKTAGKDEA 245
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
DK TY L+G+D ++ +A EL A+A+ L+ F RA+ L+ L +FI
Sbjct: 246 ADKPTYVALLGLDAARTYADELRADARDALSIFG-ERASRLNQLADFI 292
>gi|385812516|ref|YP_005848907.1| geranyltranstransferase [Lactobacillus fermentum CECT 5716]
gi|299783413|gb|ADJ41411.1| Geranyltranstransferase [Lactobacillus fermentum CECT 5716]
Length = 311
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 152/266 (57%), Gaps = 15/266 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCL 99
+L ++M YSL GGKRL TL IA E++G + + ACA+EL+ T ++I DDLP +
Sbjct: 28 LLEKSMAYSLLAGGKRLRPTLTIAVAELLGKTIDDDLVRAACALELIHTYSLIHDDLPAM 87
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--IIKA-------KNINSAVGSE 150
DNDDLRRGKP+NH+V+G A LA L LA + ++ +KA + + A G
Sbjct: 88 DNDDLRRGKPTNHRVYGPGVATLAGDGLLTLAFEWVSDNQLKAPVRLRLVQELAKAAGPA 147
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ AGQ D+++ G+E+SL++L +HR KTG + ++++G +I ++ + FG+
Sbjct: 148 GMVAGQATDVSATGQELSLAQLKKLHRQKTGALLRYAVLAGGLIAEQETAVLDCLTTFGE 207
Query: 211 YVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK-- 267
G+A+Q+++DI+DV + EM + T +D K TYP L+G+ G+K + + A+
Sbjct: 208 AYGLAFQIYDDILDVTATTAEMGKATHKDQAEQKNTYPGLLGLAGAKGELEAALTTARGA 267
Query: 268 -QELAYFDPTRAAPLDHLVNFIVSFG 292
EL LD + + G
Sbjct: 268 AAELGRLTGKETVILDDFFSVLSHLG 293
>gi|294101849|ref|YP_003553707.1| geranyltranstransferase [Aminobacterium colombiense DSM 12261]
gi|293616829|gb|ADE56983.1| Geranyltranstransferase [Aminobacterium colombiense DSM 12261]
Length = 300
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 147/246 (59%), Gaps = 15/246 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L E+M YSL GGKRL LC+ + E +GG + + MA A+E++ T ++I DDLP
Sbjct: 33 PPRLWESMTYSLQAGGKRLRPILCVKAAESVGGEKEKVLPMALALEMVHTASLIHDDLPA 92
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH------------IAIIKAKNINS- 145
+DND LRRGKP+NH ++G+A AILA AL A ++ +I++A +I +
Sbjct: 93 MDNDSLRRGKPTNHMIYGDALAILAGDALLAWAFEYSLKGLMDRGVPPSSIVQALSIFAQ 152
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
AVG GI GQ++D + SLS + I KT ++AS+V+G I+GG ++E
Sbjct: 153 AVGPSGICGGQVLDTDPASFTSSLSFVANIALQKTAVLLQASLVTGAILGGASQEIAGAF 212
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+G+++G+A+Q+ +DI+DV SPE KT G+D + K T+ G++ ++K A +
Sbjct: 213 GKYGRHLGLAFQIVDDILDVTSSPEELGKTPGKDAAQQKITFVTQFGLEEARKMALKESK 272
Query: 265 EAKQEL 270
EA + L
Sbjct: 273 EAAESL 278
>gi|261405955|ref|YP_003242196.1| poluprenyl synthetase [Paenibacillus sp. Y412MC10]
gi|261282418|gb|ACX64389.1| Polyprenyl synthetase [Paenibacillus sp. Y412MC10]
Length = 307
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 158/258 (61%), Gaps = 22/258 (8%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L +M YSL GGKR+ L IA+CE GGS+ A+ +ACA+E++ T ++I DDLP
Sbjct: 39 PETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPA 98
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA---------------KNI 143
+D+DD RRGKP+NHKVFGEA+AILA AL L ++I+A +++
Sbjct: 99 MDDDDYRRGKPTNHKVFGEASAILAGDAL--LTHAFYSVIQAARKHGVPAERVLSIVEDL 156
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
G G+ GQ+ D+ E +L +L +IH HKT I S+++G + G ++ +IE
Sbjct: 157 AVYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDSQIE 216
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R FG ++G+A+Q+ +DI+D++G ++ + D+ ++K TYP +G+D S+ + L
Sbjct: 217 SLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERL 276
Query: 263 IAEAKQELA---YFDPTR 277
AEAK+ ++ + DPTR
Sbjct: 277 TAEAKRVISEGNFADPTR 294
>gi|315303030|ref|ZP_07873740.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
gi|313628597|gb|EFR97020.1| geranyltranstransferase [Listeria ivanovii FSL F6-596]
Length = 293
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 146/246 (59%), Gaps = 16/246 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALNTDPMRGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKNINSAVGS 149
DD RRGK +NHKV+G+ATAILA AL LA +A+I + +S G+
Sbjct: 92 DDYRRGKRTNHKVYGDATAILAGDALLTLAFSVLAEDANLTFETRLALINELSFSS--GA 149
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ D+ +E K+++L EL IH KTG+ + ++ S I E+ +R+R F
Sbjct: 150 EGMVGGQQADMEAENKKITLEELATIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFA 209
Query: 210 KYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E ++ AK
Sbjct: 210 ENIGVGFQISDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVSIAKS 269
Query: 269 ELAYFD 274
L+ D
Sbjct: 270 ALSGHD 275
>gi|52080961|ref|YP_079752.1| polyprenyl synthetase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319645081|ref|ZP_07999314.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|404489843|ref|YP_006713949.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|423682933|ref|ZP_17657772.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
gi|52004172|gb|AAU24114.1| Polyprenyl synthetase,Polyprenyl synthetase [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|52348839|gb|AAU41473.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317392890|gb|EFV73684.1| YqiD protein [Bacillus sp. BT1B_CT2]
gi|383439707|gb|EID47482.1| polyprenyl synthetase [Bacillus licheniformis WX-02]
Length = 296
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 154/246 (62%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P+IL E+M YSL GGKRL L +A G + + + CA+E++ T ++I DD
Sbjct: 27 LQAPSILKESMLYSLEAGGKRLRPILVLALLHAYGKDEEAGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------IIKAKNIN----- 144
LPC+D+DDLRRGKP+NHK++GEATAILA AL + + I + K I
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAILAGDALLTESFKMITSNMPSDVSAEKRIRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQI+D+ +E K VSL EL IH KT K + S+++G I+ +E+EIE
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKSVSLDELQRIHEGKTAKLLSFSVIAGAILADASEKEIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++R F ++G+ +Q+ +DI+D+ GS + + ++ G D K+TYP L+ ++G+ + E
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDASNGKSTYPSLLSLEGASQKLDEH 266
Query: 263 IAEAKQ 268
I +AKQ
Sbjct: 267 IEKAKQ 272
>gi|417886256|ref|ZP_12530403.1| geranyltranstransferase [Lactobacillus oris F0423]
gi|341593754|gb|EGS36579.1| geranyltranstransferase [Lactobacillus oris F0423]
Length = 291
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 141/239 (58%), Gaps = 12/239 (5%)
Query: 41 AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSV-AMSMACAIELLVTMAVIQDDLPC 98
+ L +M+YS L GGKRL TL +A+ E+ GG + + A A+ELL T ++I DDLP
Sbjct: 27 STLAASMQYSVLAGGKRLRPTLTLATVEIFGGELTEDVVRAATALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------AIIKAK---NINSAVGS 149
+DNDDLRRG P+NH+ FG A LA L LA Q + A +K++ + A G
Sbjct: 87 MDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNQLPATMKSQLALELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI G+ ++L +L ++HR KTG + ++++G II + FG
Sbjct: 147 AGMVAGQARDIEGTGRRLTLDQLRYLHRQKTGALLRYAVLAGGIITVQPAAVQRLLAQFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+A+Q+++D++DV+G+ M ++ G+D K TYP L+G+ G+++ ++ + AK
Sbjct: 207 SSYGLAFQIYDDLMDVVGTTTAMGKRVGKDAAEHKNTYPGLLGVTGAEEQLQQALERAK 265
>gi|257875398|ref|ZP_05655051.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
gi|257809564|gb|EEV38384.1| geranyltranstransferase [Enterococcus casseliflavus EC20]
Length = 295
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 153/264 (57%), Gaps = 18/264 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM-ACAIELLVTMAVIQDDLPCLD 100
L E+M+YS+ GGKR+ L +A+ + A+ A A+E++ T ++I DDLP +D
Sbjct: 29 LFESMQYSIQAGGKRIRPLLLVATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMD 88
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA L A Q +A ++ + ++ A G++G
Sbjct: 89 NDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E + + L EL IH KTG+ I ++++G ++ EE + + F ++
Sbjct: 149 MVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQH 208
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KATYPKLVGIDGSKKHAKELIAEAK 267
+G+A+Q+ +D++D + E+ G+ + RD K+TYP L+G+ G+++ E + +AK
Sbjct: 209 IGLAFQIRDDLLDATSTT---EELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 265
Query: 268 QELAYFDPTRAAPLDHLVNFIVSF 291
+ LA D L+ F+ F
Sbjct: 266 EILAQLSRYGQFTQDVLLAFVERF 289
>gi|170021207|ref|YP_001726161.1| geranyltranstransferase [Escherichia coli ATCC 8739]
gi|169756135|gb|ACA78834.1| Polyprenyl synthetase [Escherichia coli ATCC 8739]
Length = 299
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 159/286 (55%), Gaps = 23/286 (8%)
Query: 25 KQINEALDEAV-PLPH---PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
KQ N+AL + PLP P + E M+Y +L GGKRL L A+ M G S + +
Sbjct: 12 KQANQALSRFIAPLPFQNTPVV--ETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAP 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
A A+E + ++I DDLP +DNDDLRRG P+ H FGEA AILA AL LA ++
Sbjct: 70 AAAVECIHAYSLIHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDAD 129
Query: 137 ---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
I + SA G G+ GQ +D+++EGK V L L IHRHKTG I A+
Sbjct: 130 MPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAA 189
Query: 188 IVSGVIIGGGN-EEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKAT 245
+ G + G + + + + +G+A+Q+ +DI+DV+G + + ++ G D K+T
Sbjct: 190 VRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKST 249
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYF--DPTRAAPLDHLVNFIV 289
YP L+G++ ++K A++LI +A+Q L + L+ L ++I+
Sbjct: 250 YPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYII 295
>gi|402298061|ref|ZP_10817785.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
gi|401726705|gb|EJS99921.1| geranyltranstransferase [Bacillus alcalophilus ATCC 27647]
Length = 293
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 160/258 (62%), Gaps = 16/258 (6%)
Query: 16 VNEYKALKAKQINEALDEAVP-----LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+NE+ ++ +DE +P L PA L +AM YSL GGKR+ L +A+ +
Sbjct: 1 MNEHLQAFIEETKFVIDEKLPQSIRALNAPASLKDAMIYSLEAGGKRIRPLLLLATLKGF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
S +ACAIE++ T ++I DDLP +D+DDLRRGKP+NHKVFGEATAILA AL
Sbjct: 61 DKSFETGYELACAIEMIHTYSLIHDDLPAMDDDDLRRGKPTNHKVFGEATAILAGDALLT 120
Query: 130 LAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + IA +++ K + A G G+ GQ+ D+ E + ++L EL +IH HKT
Sbjct: 121 HSFERIASSQLAPEKVVRLIKELAIAAGPVGMIGGQVADMEGEERALTLEELTYIHNHKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDM 239
G + SIV+G II +EE++ER+R+F + +G+ +Q+ +D++DV G E+ K G D+
Sbjct: 181 GDLLTYSIVAGAIIADASEEDVERLRHFARELGLLFQIKDDLLDVEGEQELIGKPLGSDV 240
Query: 240 MRDKATYPKLVGIDGSKK 257
+K+TYP L+G++ +K+
Sbjct: 241 GNNKSTYPSLLGLNETKE 258
>gi|433284426|emb|CCO06628.1| geranyltranstransferase [Candidatus Desulfamplus magnetomortis
BW-1]
Length = 322
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 168/322 (52%), Gaps = 38/322 (11%)
Query: 2 INSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYSL-PGGKRLMS 59
+N N T F ++ Y K +++ L + + +P L +A+ +SL GGKRL
Sbjct: 1 MNKSINITTDTLFDLSAYLKEKRAILDDYLKKVIQELNPENELAKAIEHSLMAGGKRLRP 60
Query: 60 TLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEAT 119
L +A+ + G +A+ AC+IE++ T ++I DDLP +DNDDLRRG P+ HK F EAT
Sbjct: 61 ILAMAAAQATGKDFRLALPAACSIEMIHTYSLIHDDLPAMDNDDLRRGIPTCHKAFSEAT 120
Query: 120 AILACQALHCLAMQHIAIIKAKN--------------------INSAVGSEGIAAGQIMD 159
AILA AL + H I N I+ A G+ G+ GQ+MD
Sbjct: 121 AILAGDAL----LTHAFTILTHNPRAMFDPCPNDEILFKLVAMISRAAGAHGMVEGQMMD 176
Query: 160 INSEGK-----------EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+ + G + L+ L +H KTGK I S+ SG + G + ++IER+ +
Sbjct: 177 MQATGFLDQHNQSKVNIDNCLAHLKKLHELKTGKMIVVSVESGALSAGADPDQIERLAKY 236
Query: 209 GKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
VG+A+Q+ +DI++V G P M + G D M +K T+P L+G++ S+ A+ LI EA
Sbjct: 237 AGKVGLAFQVADDILNVEGDPYVMGKAAGSDAMNNKMTFPALLGLEPSRTFARNLIQEAL 296
Query: 268 QELAYFDPTRAAPLDHLVNFIV 289
+ L F+ PL + +IV
Sbjct: 297 EPLNTFNEKDILPLKAIAGYIV 318
>gi|422619559|ref|ZP_16688248.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
gi|330899928|gb|EGH31347.1| polyprenyl synthetase, partial [Pseudomonas syringae pv. japonica
str. M301072]
Length = 281
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 163/276 (59%), Gaps = 17/276 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALDGLFKAPGPELERLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q-----HIAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H+ A+ + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPHLTSRDAETRLQMVTALATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IEAS+ G + G ++ ++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGHADQPRLDALQVYARAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
+ RDK TYP L+G++ +K +A EL +A Q L+ FD
Sbjct: 242 IARDKPTYPALLGLEAAKHYALELRDQALQALSPFD 277
>gi|425901813|ref|ZP_18878404.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397893029|gb|EJL09505.1| geranyltranstransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 295
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 169/291 (58%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P A L++AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IAAYQASSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGAR 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + +++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSDSSAEIRLQMVSTLALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAG-AEPLRELARYIV 291
>gi|226949181|ref|YP_002804272.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
gi|226842010|gb|ACO84676.1| geranyltranstransferase [Clostridium botulinum A2 str. Kyoto]
Length = 290
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|347548748|ref|YP_004855076.1| putative geranyltranstransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981819|emb|CBW85792.1| Putative geranyltranstransferase [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 293
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 18/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + + A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALNTDPMLGVKTATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------HIAIIKAKNINSAVGS 149
DD RRGK +NHKV+G+ATAILA AL LA IA+I + +S G+
Sbjct: 92 DDYRRGKWTNHKVYGDATAILAGDALLTLAFSVLAEDANLTFETRIALISELSFSS--GA 149
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ D+ +E +V+L EL IH KTG+ + ++ S I E+ +R+R F
Sbjct: 150 EGMVGGQQADMEAENNQVTLEELASIHARKTGELLIFAVTSAAKIAEATPEQTKRLRIFA 209
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K+ E ++ AK
Sbjct: 210 ENIGVGFQISDDILDVIGDEMKMGKKTGGDAFLNKSTYPGLLTLDGAKRALNEHVSIAKL 269
Query: 269 ELA--YFDPTRAAPLDHLVNF 287
L+ FD L L+ F
Sbjct: 270 ALSGHGFDDIILLKLADLIAF 290
>gi|229086753|ref|ZP_04218919.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
gi|228696574|gb|EEL49393.1| Geranyltranstransferase [Bacillus cereus Rock3-44]
Length = 297
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 152/249 (61%), Gaps = 14/249 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P +L EAM YSL GGKRL L A+ + + + + ACA+E++ T ++I DD
Sbjct: 28 LQCPNVLREAMIYSLEAGGKRLRPLLLFATLQAFEKERELGIGAACALEMIHTYSLIHDD 87
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS---------- 145
LPC+D+DDLRRGKP+NHKVFGEA A+LA L A Q + +++ +
Sbjct: 88 LPCMDDDDLRRGKPTNHKVFGEAMAVLAGDGLLTYAFQAVTAYDHQDVQAETKLRLALEL 147
Query: 146 --AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ AGQ+ D+ +EGK + L +IH+HKTG+ +E ++++G I+ G E+ E
Sbjct: 148 AKAAGPEGMVAGQVADMEAEGKRLEREGLEYIHKHKTGRLLEYAVLAGAILAGATPEQEE 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ F KY+G+A+Q+ +DI+DV G+ E+ + G D +K+TY L ID +K +E
Sbjct: 208 KLLAFAKYIGLAFQIRDDILDVEGTEEEIGKPIGSDASNEKSTYTTLFTIDEAKCILEET 267
Query: 263 IAEAKQELA 271
I +AK +A
Sbjct: 268 IGKAKDAIA 276
>gi|386826800|ref|ZP_10113907.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
gi|386427684|gb|EIJ41512.1| geranylgeranyl pyrophosphate synthase [Beggiatoa alba B18LD]
Length = 296
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 173/293 (59%), Gaps = 22/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ E+ +L ++IN+AL + +P PH P LHEAM Y+ L GGKR+ L + + + +
Sbjct: 3 LQEFMSLYQQRINQALTQHLPAPHILPVRLHEAMHYAVLNGGKRVRPLLVYLTGQALNVA 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
V ACA+E + +++ DDLP +D+DDLRRGKP+ HK F EATAILA AL A
Sbjct: 63 PDVLDIPACAVECIHAYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDALQAHAF 122
Query: 133 --------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
Q +A+++A ++ S+ S G+ GQ++D+ + GK ++ +EL +H H
Sbjct: 123 YLLTHDPTQQLSPAQRLAMVEALSLASS--SRGMVGGQMIDMEAVGKNLNAAELENMHIH 180
Query: 179 KTGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTG 236
KTG I AS+ G + +EE E++ + K +G+A+Q+ +DI+DV E + +K G
Sbjct: 181 KTGALIRASVKLGALASPNFSEETFEQLDRYAKCIGLAFQIQDDILDVEAPTETLGKKQG 240
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D +K TYP ++G+ SK+ A ELI +A Q L FD RA PL L ++I+
Sbjct: 241 ADTALNKPTYPSIIGLQASKQMAIELIEQAVQALQTFD-QRADPLRELAHYII 292
>gi|117618681|ref|YP_857809.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560088|gb|ABK37036.1| geranyltranstransferase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 296
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 165/292 (56%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++++ L ++I++ L E++P P L +AMRY L GGKR+ L A EM+G
Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAPR-LRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KNELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG+++S++EL +HRHK
Sbjct: 122 FTILADHPMPDSLLANRVRMLSRLARASGYLGMCGGQALDLQAEGRQISIAELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + +E + ++ + +G+A+Q+ +DI+D+ G + + ++ G
Sbjct: 182 TGALIECAVALGALCKADVDETTLSALQTYAAAIGLAFQVQDDILDITGDTATLGKRQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ ++K+TYP L+G+D +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLAQEKSTYPALLGLDNARELARELHGKALTALQSL-PYNTDILEAFADYII 292
>gi|312869913|ref|ZP_07730052.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
gi|311094498|gb|EFQ52803.1| geranyltranstransferase [Lactobacillus oris PB013-T2-3]
Length = 291
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 141/239 (58%), Gaps = 12/239 (5%)
Query: 41 AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSV-AMSMACAIELLVTMAVIQDDLPC 98
+ L +M+YS L GGKRL TL +A+ E+ GG + + A A+ELL T ++I DDLP
Sbjct: 27 STLAASMQYSVLAGGKRLRPTLTLATVEIFGGELTEDVVRAATALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI------AIIKAK---NINSAVGS 149
+DNDDLRRG P+NH+ FG A LA L LA Q + A +K++ + A G
Sbjct: 87 MDNDDLRRGAPTNHRKFGAGMATLAGDGLLTLAFQWVTDNQLPATMKSQLALELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI G+ ++L +L ++HR KTG + ++++G II + FG
Sbjct: 147 AGMVAGQARDIEGTGRRLTLDQLRYLHRQKTGALLRYAVLAGGIITVQPAAVQRLLAQFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+A+Q+++D++DV+G+ M ++ G+D K TYP L+G+ G+++ ++ + AK
Sbjct: 207 SSYGLAFQIYDDLMDVVGTTTAMGKRVGKDAADHKNTYPGLLGVTGAEEQLQQALERAK 265
>gi|332799347|ref|YP_004460846.1| polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
gi|332697082|gb|AEE91539.1| Polyprenyl synthetase [Tepidanaerobacter acetatoxydans Re1]
Length = 296
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 150/268 (55%), Gaps = 17/268 (6%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A+ + + L +P P+ LHEAM YS L GGKRL + + + E+ G S + A
Sbjct: 12 AQVVEQELSRYLPRKDEFPSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTA 71
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---- 136
C IE++ T ++I DDLP +DNDD RRGKP+ HK++G+A A+LA AL A IA
Sbjct: 72 CGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSK 131
Query: 137 ---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+ + ++ A G G+ GQ +DI + GK+VS L +I HKTG + S
Sbjct: 132 ISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVS 191
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATY 246
SG + G ++E++E ++ FG+ +G+ +Q+ +DI+D+ GS + K G DM K T+
Sbjct: 192 FWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTF 251
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFD 274
L G + S + L EAKQ ++ ++
Sbjct: 252 VNLFGFNKSVEIVNNLSLEAKQLISNYN 279
>gi|148379844|ref|YP_001254385.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
gi|148289328|emb|CAL83424.1| geranyltranstransferase [Clostridium botulinum A str. ATCC 3502]
Length = 294
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 33 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 92
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 93 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALEACYAIAKAAGVDG 152
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 153 MIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELLGEYGDN 212
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 213 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 255
>gi|319792406|ref|YP_004154046.1| polyprenyl synthetase [Variovorax paradoxus EPS]
gi|315594869|gb|ADU35935.1| Polyprenyl synthetase [Variovorax paradoxus EPS]
Length = 304
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 149/249 (59%), Gaps = 13/249 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
++ AL V + P +L +AMRY+ L GGKRL L +A+ E +GG+++ A+ ACA E
Sbjct: 24 RVEAALSRWVGVEAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNEAAALRAACAAE 83
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-------- 136
L+ +++ DDLPC+DND LRRGKP+ H FGEA A+LA AL LA + +A
Sbjct: 84 LIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLAPEGDEIPA 143
Query: 137 ---IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVI 193
+ + A GS+G+A GQ +D+ S G ++ ++L +HR KTG ++ S+ G
Sbjct: 144 ATQATLCRLLARAAGSQGMAGGQAIDLASVGIALNETQLREMHRLKTGALLQGSVEMGAA 203
Query: 194 IGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
G + + +R++G +G+A+Q+ +DI+DV + KT G+D DK TY L+G+
Sbjct: 204 CGNVSAAALAALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLLGL 263
Query: 253 DGSKKHAKE 261
DG++ A++
Sbjct: 264 DGARTQARQ 272
>gi|438002488|ref|YP_007272231.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
gi|432179282|emb|CCP26255.1| Octaprenyl-diphosphate synthase [Tepidanaerobacter acetatoxydans
Re1]
Length = 286
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 150/268 (55%), Gaps = 17/268 (6%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
A+ + + L +P P+ LHEAM YS L GGKRL + + + E+ G S + A
Sbjct: 2 AQVVEQELSRYLPRKDEFPSKLHEAMHYSTLSGGKRLRPIIVMKAAELFGISYEKVIPTA 61
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---- 136
C IE++ T ++I DDLP +DNDD RRGKP+ HK++G+A A+LA AL A IA
Sbjct: 62 CGIEMIHTYSLIHDDLPVMDNDDFRRGKPTCHKIYGDAVALLAGDALLTHAFATIAKNSK 121
Query: 137 ---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
+ + ++ A G G+ GQ +DI + GK+VS L +I HKTG + S
Sbjct: 122 ISGINPDAVVDVIEKVSLAAGGYGMIGGQTVDIITSGKDVSRDTLFYISTHKTGCLMSVS 181
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATY 246
SG + G ++E++E ++ FG+ +G+ +Q+ +DI+D+ GS + K G DM K T+
Sbjct: 182 FWSGARLAGASKEDLETIKCFGEKLGLIFQIVDDILDIKGSEAVLGKPVGSDMKNKKNTF 241
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFD 274
L G + S + L EAKQ ++ ++
Sbjct: 242 VNLFGFNKSVEIVNNLSLEAKQLISNYN 269
>gi|153937414|ref|YP_001387682.1| geranyltranstransferase [Clostridium botulinum A str. Hall]
gi|152933328|gb|ABS38827.1| putative geranyltranstransferase [Clostridium botulinum A str.
Hall]
Length = 290
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALEACYAIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSDTYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|422418964|ref|ZP_16495919.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
gi|313633363|gb|EFS00206.1| geranyltranstransferase [Listeria seeligeri FSL N1-067]
Length = 293
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 146/241 (60%), Gaps = 12/241 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YS+ GGKR+ L A+ + + + +A A+E++ T ++I DDLP +DN
Sbjct: 32 LKESMLYSVQAGGKRIRPMLVFATLQALQVDPMRGVKVATALEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRGK +NHKV+G+ATAILA AL LA +A I I+ + G+EG
Sbjct: 92 DDYRRGKWTNHKVYGDATAILAGDALLTLAFSILAEDENLSFETRIGLINQISFSSGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ D+ +E K+V+L+EL IH KTG+ + ++ S I + E+ +R+R F +
Sbjct: 152 MVGGQQADMEAENKQVTLAELTSIHARKTGELLIFAVTSAAKIAEASIEQTKRLRIFAEN 211
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+ +Q+ +DI+DVIG +M +KTG D +K+TYP L+ +DG+K E ++ AK L
Sbjct: 212 IGIGFQISDDILDVIGDETKMGKKTGVDAFMNKSTYPGLLTLDGAKSALNEHVSIAKSAL 271
Query: 271 A 271
+
Sbjct: 272 S 272
>gi|431931138|ref|YP_007244184.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
gi|431829441|gb|AGA90554.1| geranylgeranyl pyrophosphate synthase [Thioflavicoccus mobilis
8321]
Length = 298
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/279 (39%), Positives = 164/279 (58%), Gaps = 15/279 (5%)
Query: 26 QINEALDEAVPLP--HPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++ ALD +P P LH AMRY +L GGKR+ L A+ + IG + + ACA
Sbjct: 16 RVEAALDRCLPKAEIQPGQLHAAMRYAALGGGKRIRPILAYAAAQAIGLAPERVNAPACA 75
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN 142
+EL+ ++I DDLP +D+DDLRRG+ + HK F EATAILA AL LA Q + + +
Sbjct: 76 VELIHAYSLIHDDLPAMDDDDLRRGRLTCHKAFDEATAILAGDALQTLAFQTLTTAEGLS 135
Query: 143 INS----------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI-VSG 191
I + A GS G+ GQ MD+ +EG+ + L IH HKTG I A++ ++
Sbjct: 136 IEARLAMVDTLARAAGSRGMVGGQAMDLAAEGQTLDRVSLESIHIHKTGALIRAAVQMAT 195
Query: 192 VIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLV 250
+ G + E +R+ ++ K +G+A+Q+ +DI+DV G + KT G+D + KATYP L+
Sbjct: 196 QALPGLDPEIAQRLDHYAKCLGLAFQIRDDILDVEGETAVIGKTQGKDQTQAKATYPALL 255
Query: 251 GIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
G+ G+K+ A LI +A + LA DP APL L +++V
Sbjct: 256 GLAGAKEAAATLIDDAHESLAALDPQATAPLRWLADYMV 294
>gi|83648505|ref|YP_436940.1| geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
gi|83636548|gb|ABC32515.1| Geranylgeranyl pyrophosphate synthase [Hahella chejuensis KCTC
2396]
Length = 299
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/299 (37%), Positives = 164/299 (54%), Gaps = 22/299 (7%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLC 62
+ D+L FFQ N QI++AL +P P A L+EAM Y L GGKR+ L
Sbjct: 4 KTDSLDDFFQRNR------AQIDQALANLLPEPEGPKARLNEAMGYCVLNGGKRVRPLLL 57
Query: 63 IASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAIL 122
+A+ E +GG A+ CA+EL+ +++ DDLP +D+D LRRGKP+ H + EATAIL
Sbjct: 58 LATTEALGGDLQQALPACCAVELIHAYSLVHDDLPAMDDDSLRRGKPTCHIAYDEATAIL 117
Query: 123 ACQALHCLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSEL 172
L LA + + + + A G +G+ GQ +DI SEG + L EL
Sbjct: 118 VGDGLQTLAFSALTESSGASAESVLQMVRELARASGHQGMVGGQAIDIYSEGHTLKLEEL 177
Query: 173 NFIHRHKTGKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM 231
+H KTG IEASIV G + G + E IE +R F + +G+A+Q+ +DI+DV +
Sbjct: 178 ERMHLEKTGALIEASIVLGALASGRADAECIEGLRRFARAIGLAFQVRDDIIDVESDTSV 237
Query: 232 REKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KT G+D R+K TY L+G++ +K A +L EA +L + + L L +F++
Sbjct: 238 LGKTAGKDAERNKPTYTSLLGLEQAKLKALQLHNEALSQLQALG-LQNSRLQDLASFMI 295
>gi|392953580|ref|ZP_10319134.1| polyprenyl synthetase [Hydrocarboniphaga effusa AP103]
gi|391859095|gb|EIT69624.1| polyprenyl synthetase [Hydrocarboniphaga effusa AP103]
Length = 297
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 167/282 (59%), Gaps = 22/282 (7%)
Query: 25 KQINEALDEAVPLP--HPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+++ ALD +P P +PA LHEAMRYS GGKRL + L A+ E++ + ACA
Sbjct: 15 QRVEAALDRCIPAPGTYPARLHEAMRYSTQGGKRLRALLVYAAGEVLALDPEALDAPACA 74
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----I 137
+EL+ +++ DDLP +D+DDLRRG+P+ HK + EATAIL L LA +A +
Sbjct: 75 LELIHAYSLVHDDLPSMDDDDLRRGRPTTHKQYDEATAILVGDGLQALAFAVLAREGQHL 134
Query: 138 IKAKNIN------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV-- 189
+ A+ + A GS G+ GQ +D+ SE + ++L+EL +H HKTG I AS++
Sbjct: 135 VAAQRLQMISTLARASGSCGMVGGQAVDLESEQRSLTLAELECLHMHKTGALILASLMLV 194
Query: 190 --SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATY 246
+ G +ER +G+ +G+AYQ+ +D++D+ G S ++ + G+D+ K+TY
Sbjct: 195 TQASAFADAGWFNALER---YGRLIGLAYQIQDDVLDIEGSSADLGKTAGKDVAAHKSTY 251
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
P L+G+D +K+ A +L EA+ LA F RA PL L + I
Sbjct: 252 PSLMGLDPAKRRAAQLFDEARTALAVFG-DRAEPLVWLADHI 292
>gi|126653065|ref|ZP_01725200.1| YqiD [Bacillus sp. B14905]
gi|126590166|gb|EAZ84290.1| YqiD [Bacillus sp. B14905]
Length = 293
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L ++M YSL GGKR+ +A E+ + + + IE++ T ++I DDLP
Sbjct: 30 PVDLKDSMLYSLKAGGKRIRPLFVLAVLELYQKNLQDGLIVGSVIEIIHTYSLIHDDLPS 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLA---MQHIAIIKAKNI------NSAVGS 149
+DNDD RRGKP+NHKV+GEA A LA AL+ LA + + + K I + A G+
Sbjct: 90 MDNDDFRRGKPTNHKVYGEALATLAGDALNTLAFGILARMEVTAEKRIELVQLLSVAAGA 149
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ E +++ L+EL +H +KTG + SI +G ++ ++++ ++ +
Sbjct: 150 EGMVGGQVLDMEGEQRQLDLTELEQVHVNKTGALLRFSIEAGAVLADASKQDRATLKEYA 209
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
++G+A+Q+ +DI+D+ G+ E KT G+D+ DK+TYP L+ ++G+K+ E A
Sbjct: 210 HHIGLAFQIQDDILDIEGTTEELGKTAGKDVASDKSTYPALLTLNGAKEKLAEHYQHAIN 269
Query: 269 ELAYFDPTRAAPLDHLVNFIVSFGN 293
L P A+ L +IV N
Sbjct: 270 ALDQL-PIDASLLRDFAAYIVHRKN 293
>gi|299537767|ref|ZP_07051056.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
gi|298726746|gb|EFI67332.1| geranyltranstransferase [Lysinibacillus fusiformis ZC1]
Length = 293
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 156/267 (58%), Gaps = 18/267 (6%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
N+ L F + N QI E + V + PA L E+M YSL GGKR+ +A
Sbjct: 2 NEPLKYFIESN------TPQIEETMFSLVEQIDAPADLKESMLYSLKAGGKRIRPLFVLA 55
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
E+ + + + IE++ T ++I DDLP +DNDD RRGKP+NHKV+GEA A LA
Sbjct: 56 VLELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAG 115
Query: 125 QALHCLAMQHIA---IIKAKNI------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
AL+ LA +A I K I + A G+EG+ GQ++D+ E ++++L+EL +
Sbjct: 116 DALNTLAFGILARMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQV 175
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT 235
H +KTG + SI +G ++ + ++ ++ + ++G+A+Q+ +DI+D+ G+ E KT
Sbjct: 176 HVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKT 235
Query: 236 -GRDMMRDKATYPKLVGIDGSKKHAKE 261
G+D+ DK+TYP L+ ++G+K+ E
Sbjct: 236 AGKDVASDKSTYPALLTLEGAKEKLAE 262
>gi|325569748|ref|ZP_08145772.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|420262480|ref|ZP_14765121.1| geranyltranstransferase [Enterococcus sp. C1]
gi|325157053|gb|EGC69219.1| geranyltranstransferase [Enterococcus casseliflavus ATCC 12755]
gi|394770237|gb|EJF50041.1| geranyltranstransferase [Enterococcus sp. C1]
Length = 298
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 153/264 (57%), Gaps = 18/264 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM-ACAIELLVTMAVIQDDLPCLD 100
L ++M+YS+ GGKR+ L A+ + A+ A A+E++ T ++I DDLP +D
Sbjct: 32 LFKSMQYSIQAGGKRIRPLLLAATVAAFHKPVNTAVYQCAAALEMVHTYSLIHDDLPAMD 91
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA L A Q +A ++ + ++ A G++G
Sbjct: 92 NDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E + +SL EL IH KTG+ I ++++G ++ EE + + F ++
Sbjct: 152 MVAGQAADIQGENQALSLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQH 211
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KATYPKLVGIDGSKKHAKELIAEAK 267
+G+A+Q+ +D++D + E+ G+ + RD K+TYP L+G+ G+++ E + +AK
Sbjct: 212 IGLAFQIRDDLLDATSTT---EELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 268
Query: 268 QELAYFDPTRAAPLDHLVNFIVSF 291
+ LA D L+ F+ F
Sbjct: 269 EILAQLSQYGQFTPDVLLAFVERF 292
>gi|424925133|ref|ZP_18348494.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
gi|404306293|gb|EJZ60255.1| Geranylgeranyl pyrophosphate synthase [Pseudomonas fluorescens
R124]
Length = 295
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 167/295 (56%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALD--EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ PLP + L+EAM YS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALEILFKAPLPELSRLYEAMHYSVMIGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNINS---AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + + + A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 SALLDPRLSSLDADIRLQQVTALAHAAGPAGMVGGQAIDLGSVGLKLDQQALEQMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G +++++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEQDQLKALQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKVYALELRDQALHALRPFDAA-AEPLRDLARYIVERRN 295
>gi|343519656|ref|ZP_08756635.1| polyprenyl synthetase [Haemophilus pittmaniae HK 85]
gi|343392503|gb|EGV05069.1| polyprenyl synthetase [Haemophilus pittmaniae HK 85]
Length = 297
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 157/269 (58%), Gaps = 15/269 (5%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM++ L GGKR+ L A+ EM+G + A AIE + ++I DDLP
Sbjct: 30 HQAPLRDAMKHGLLLGGKRVRPFLLYATGEMLGATPQALDYAAAAIEAVHAYSLIHDDLP 89
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAV 147
+D+D LRRG+P+ H F EATAILA AL LA + + ++ K + A
Sbjct: 90 AMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEMLTETPVISAEQKLLLVKTLAQAS 149
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIERM 205
G EG+ GQ +D+ SE K+VSL+EL IHR+KTG + A+++ G I + +++
Sbjct: 150 GVEGMCLGQSLDLISEHKQVSLAELELIHRNKTGALLNAALMMGFICSPHFNDTTLAKQL 209
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+ + + +G+A+Q+ +DI+D+ G KT G D+ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 210 QRYAQAIGLAFQVQDDILDIEGETATLGKTAGSDLNLDKSTYPKLLGLTGAKQKAQELYQ 269
Query: 265 EAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+A Q LA P + L L FIV+ N
Sbjct: 270 DALQALADI-PFDSKALRALAEFIVNRKN 297
>gi|378953114|ref|YP_005210602.1| IspA protein [Pseudomonas fluorescens F113]
gi|359763128|gb|AEV65207.1| IspA [Pseudomonas fluorescens F113]
Length = 295
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 168/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD + P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IGAYQASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQ 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A ++ ++ A G G+ GQ +D+ S G ++ S L ++HRHKT
Sbjct: 122 SALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G +++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVKLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAA-AEPLRDLARYIV 291
>gi|424735521|ref|ZP_18163984.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
gi|422950178|gb|EKU44547.1| geranyltranstransferase [Lysinibacillus fusiformis ZB2]
Length = 293
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 156/267 (58%), Gaps = 18/267 (6%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIA 64
N+ L F + N QI E + V + PA L E+M YSL GGKR+ +A
Sbjct: 2 NEPLKYFIESN------TPQIEETMFSLVEQIDAPADLKESMLYSLKAGGKRIRPLFVLA 55
Query: 65 SCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILAC 124
E+ + + + IE++ T ++I DDLP +DNDD RRGKP+NHKV+GEA A LA
Sbjct: 56 ILELYRENLQDGLIVGSVIEIIHTYSLIHDDLPSMDNDDFRRGKPTNHKVYGEALATLAG 115
Query: 125 QALHCLAMQHIA---IIKAKNI------NSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
AL+ LA +A I K I + A G+EG+ GQ++D+ E ++++L+EL +
Sbjct: 116 DALNTLAFGILARMDIAAEKRIELVQLLSIAAGAEGMVGGQVLDMEGEQRQLNLAELEQV 175
Query: 176 HRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT 235
H +KTG + SI +G ++ + ++ ++ + ++G+A+Q+ +DI+D+ G+ E KT
Sbjct: 176 HVNKTGALLRFSIEAGAVLADVSAQDRATLKEYAHHIGLAFQIQDDILDIEGTTEELGKT 235
Query: 236 -GRDMMRDKATYPKLVGIDGSKKHAKE 261
G+D+ DK+TYP L+ ++G+K+ E
Sbjct: 236 AGKDVASDKSTYPALLTLEGAKEKLAE 262
>gi|421838068|ref|ZP_16272058.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
gi|409739634|gb|EKN40262.1| geranyltranstransferase, partial [Clostridium botulinum
CFSAN001627]
Length = 262
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 1 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 60
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 61 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 120
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ +TG I+ASI++G I+G +IE + +G
Sbjct: 121 MIGGQVVDILSEDKSIPLDELYYMHKKRTGALIKASILAGAILGSATYTDIELLGEYGDN 180
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 181 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 223
>gi|257865770|ref|ZP_05645423.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257872105|ref|ZP_05651758.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
gi|257799704|gb|EEV28756.1| geranyltranstransferase [Enterococcus casseliflavus EC30]
gi|257806269|gb|EEV35091.1| geranyltranstransferase [Enterococcus casseliflavus EC10]
Length = 295
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 152/264 (57%), Gaps = 18/264 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSM-ACAIELLVTMAVIQDDLPCLD 100
L E+M+YS+ GGKR+ L A+ + A+ A A+E++ T ++I DDLP +D
Sbjct: 29 LFESMQYSIQAGGKRIRPLLLAATVAAFHKPINTAVYQCAAALEMVHTYSLIHDDLPAMD 88
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA L A Q +A ++ + ++ A G++G
Sbjct: 89 NDDLRRGKPTNHKVFGEALAILAGDGLLTAAFQLVAMAEIEANQKVLLLQQLSKAAGTQG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E + + L EL IH KTG+ I ++++G ++ EE + + F ++
Sbjct: 149 MVAGQAADIQGENQALRLEELMSIHERKTGELIRFAVIAGGVLADQTEEVLHELDRFAQH 208
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTGRDMMRD----KATYPKLVGIDGSKKHAKELIAEAK 267
+G+A+Q+ +D++D + E+ G+ + RD K+TYP L+G+ G+++ E + +AK
Sbjct: 209 IGLAFQIRDDLLDATSTT---EELGKVVRRDDELAKSTYPALLGLAGAQQALTEELGKAK 265
Query: 268 QELAYFDPTRAAPLDHLVNFIVSF 291
+ LA D L+ F+ F
Sbjct: 266 EILAQLSQYGQFTQDVLLAFVERF 289
>gi|238795560|ref|ZP_04639075.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
gi|238720679|gb|EEQ12480.1| Geranyltranstransferase [Yersinia mollaretii ATCC 43969]
Length = 306
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 158/288 (54%), Gaps = 19/288 (6%)
Query: 25 KQINEAL-DEAVPLPH-PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
+++N+AL D PLP + L EAMRY ++ GGKRL L A+ +M G S + A
Sbjct: 19 QRVNQALLDFIAPLPFGDSDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLSLVNLDAPAA 78
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
AIE + ++I DDLP +DNDDLRRG+P+ H FGEA AILA AL LA +A
Sbjct: 79 AIECIHAYSLIHDDLPAMDNDDLRRGQPTCHVKFGEANAILAGDALQTLAFSILAEADMS 138
Query: 137 -------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + A G G+ GQ +D+ +E +++SL++L IHRHKTG I A++
Sbjct: 139 DVADKDRLAMVAELARASGVAGMCGGQALDLEAEARQISLADLEQIHRHKTGALIRAAVR 198
Query: 190 SGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYP 247
G + G + + + + +G+A+Q+ +DI+DVIG + + ++ G D K+TYP
Sbjct: 199 LGALAAGERGRAALPFLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYP 258
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNFIVSFGN 293
L+G+D +K A +L EA L APL L FI+ N
Sbjct: 259 ALMGLDCAKAKAMDLYQEALSALNILSAQSYNIAPLQALACFIIERDN 306
>gi|359798545|ref|ZP_09301116.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
gi|359363367|gb|EHK65093.1| geranyltranstransferase [Achromobacter arsenitoxydans SY8]
Length = 303
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 165/291 (56%), Gaps = 20/291 (6%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGG 71
E+ +A+ I + LD+ +P P+ LHEAMRY+ L GGKR+ + L A+ C + G
Sbjct: 10 EWLQGRARHIEDVLDDLLPPADALPSRLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGS 69
Query: 72 SQSVAMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
++ S+ A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL
Sbjct: 70 VLAIEASLDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQ 129
Query: 129 CLAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA + +A I++A +++ A GS+G+A GQ +D+ S G+ +S EL +H K
Sbjct: 130 PLAFELLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDELQMMHGMK 189
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
TG + S+ G I+ G + + + + + VG+A+Q+ +DI+DV S + + G+D
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTPGKD 249
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+K TY L+G+ ++ A EL A LA A L L +FIV
Sbjct: 250 AAENKPTYVSLLGLSEARAFAGELREAALDALAPLGDA-GARLAQLADFIV 299
>gi|302389865|ref|YP_003825686.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
gi|302200493|gb|ADL08063.1| farnesyl-diphosphate synthase [Thermosediminibacter oceani DSM
16646]
Length = 296
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 156/283 (55%), Gaps = 19/283 (6%)
Query: 24 AKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
K I +ALD +P +P +HEAMRYS GGKR+ L + + E+ G + A
Sbjct: 12 GKIIEKALDFYIPKSNEYPQKIHEAMRYSTFNGGKRIRPVLTMKAAELFGLQGEKVIPTA 71
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----- 135
C IE++ T ++I DDLP +DNDD RRGKP+ HKVFG+A A+LA AL LA I
Sbjct: 72 CGIEMIHTYSLIHDDLPIMDNDDFRRGKPTCHKVFGDAIALLAGDALLTLAFNTIVKNAQ 131
Query: 136 -------AIIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
A+I I+ A GS G+ GQ +DI S+G + L ++ HKTG I+AS
Sbjct: 132 IEGISMQAVIDVIGRISRASGSLGMIGGQTVDILSQGVSIDEKTLFYMDYHKTGCLIQAS 191
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATY 246
+ +G + ++ ++ FG+ +G+ +Q+ +D++D+ G ++ + G D+ K+T+
Sbjct: 192 LWAGARLAEAPASDLNKLDIFGEKIGLIFQIVDDLLDICGDEKKLGKPVGSDVRNKKSTF 251
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
P + G + S K K+L EAK+ + F LV+F+V
Sbjct: 252 PSVYGYENSVKLIKDLSEEAKEIILEF--KNGEFFVQLVDFLV 292
>gi|333376484|ref|ZP_08468260.1| geranyltranstransferase [Kingella kingae ATCC 23330]
gi|332967867|gb|EGK06963.1| geranyltranstransferase [Kingella kingae ATCC 23330]
Length = 295
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 167/293 (56%), Gaps = 19/293 (6%)
Query: 16 VNEYKALKAKQINEA---LDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMI 69
+N+ K + + + +A L +P+ P LHEAMRYS L GGKRL L +A+ E+
Sbjct: 1 MNDLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELG 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
Q+ + A+E + +++ DD+P +DND LRRGKP+ H FGEATA+L AL
Sbjct: 61 NQVQAACEAAMAAVECIHVYSLVHDDMPAMDNDSLRRGKPTCHVQFGEATALLVGDALQT 120
Query: 130 LAMQ------HIAIIK----AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA ++ ++ K + A GS G+A GQ +D+ + G+++S +EL F+H K
Sbjct: 121 LAFDILSTETELSTVRQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLK 180
Query: 180 TGKFIEASI-VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
TG I A++ + G+ N+E++ + + +G+A+Q+ +D++D KT G+
Sbjct: 181 TGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTAGK 240
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
D +K TY KL+G+ ++ +A++L+A+A L FD TRA L L F+V+
Sbjct: 241 DADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQFVVA 292
>gi|358636220|dbj|BAL23517.1| polyprenyl synthetase [Azoarcus sp. KH32C]
Length = 298
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 158/281 (56%), Gaps = 17/281 (6%)
Query: 25 KQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++ AL + +P + P LH AMRY+ L GGKR+ L A+ + G + +AC
Sbjct: 15 QRTETALADVLPADNIAPQRLHAAMRYAVLGGGKRVRPLLVHAAGRLAGADPARLDRIAC 74
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAK 141
A+EL+ +++ DDLPC+D+D LRRGKP+ H + EATA+L AL LA Q +A
Sbjct: 75 AVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEYDEATALLVGDALQALAFQVLADTPLA 134
Query: 142 N-----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ A GS G+A GQ +D+ + GK+++ EL F+H HKTG I AS++
Sbjct: 135 ATPAVQLEMIALLGRASGSRGMAGGQAIDLGAVGKQLTREELEFMHIHKTGALIRASVLL 194
Query: 191 GVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
G G E++ + ++GK VG+ +Q+ +DI+D KT G+D ++K TY
Sbjct: 195 GAQCGDALPAEQLAPLDHYGKVVGLLFQVVDDILDAQADTATLGKTAGKDADQNKPTYVT 254
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
L+G+ ++ ++ L+A A++ L+ F P A L L NFIV
Sbjct: 255 LLGMSEARTLSESLLANAQEALSSFGPG-AVRLAELANFIV 294
>gi|329924775|ref|ZP_08279764.1| geranyltranstransferase [Paenibacillus sp. HGF5]
gi|328940440|gb|EGG36763.1| geranyltranstransferase [Paenibacillus sp. HGF5]
Length = 304
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 157/258 (60%), Gaps = 22/258 (8%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L +M YSL GGKR+ L IA+CE GGS+ A+ +ACA+E++ T ++I DDLP
Sbjct: 36 PETLSRSMSYSLMAGGKRMRPLLVIAACEAGGGSREAAVPVACAVEMVHTYSLIHDDLPA 95
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA---------------KNI 143
+D+DD RRGKP+NHKVFGEA+AILA AL L ++I+A +++
Sbjct: 96 MDDDDYRRGKPTNHKVFGEASAILAGDAL--LTHAFYSVIQAARKHGVPAERVLSIVEDL 153
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
G G+ GQ+ D+ E +L +L +IH HKT I S+++G + G ++ +IE
Sbjct: 154 AEYAGPRGMVGGQVADMEGEQGITTLEQLEYIHLHKTSDLIMFSLMAGGHVAGCSDAQIE 213
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R FG ++G+A+Q+ +DI+D++G ++ + D+ ++K TYP +G+D S+ + L
Sbjct: 214 SLRTFGHHIGLAFQIQDDILDLVGDESKLGKPVQSDVKQEKVTYPYFIGLDASRHEVERL 273
Query: 263 IAEAKQELA---YFDPTR 277
AEAK+ ++ + DP R
Sbjct: 274 TAEAKRVISEGNFADPAR 291
>gi|359300112|ref|ZP_09185951.1| geranyltranstransferase [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305168|ref|ZP_10824227.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
gi|400376281|gb|EJP29168.1| polyprenyl synthetase [Haemophilus sputorum HK 2154]
Length = 295
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 171/292 (58%), Gaps = 19/292 (6%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ +++ A K+IN+ + A+ A L EAM Y+ L GGKR+ L A+ M+G S
Sbjct: 3 YTLSDDLAFFQKRINDFIQSALKHYPNARLTEAMAYAVLLGGKRVRPFLIYATGRMLGVS 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A A+E + +++ DDLP +D+D LRRG P+ H F EATAILA AL +A
Sbjct: 63 LDKLDTSAAAMESIHAYSLVHDDLPAMDDDALRRGNPTCHIAFDEATAILAGDALQSMAF 122
Query: 133 ------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q +A I A + +A G++G+ GQ +D+ +E K VSL+EL IHR+KT
Sbjct: 123 SLISDDEKLTDSQKVAQISA--LATAAGAKGMCFGQSLDLIAEDKSVSLAELEQIHRNKT 180
Query: 181 GKFIEASIVSGVIIG-GGNEEEIE-RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGR 237
G IE S++ G+ + N+ I +++ + + +G+A+Q+ +DI+DVIG E + ++ G
Sbjct: 181 GALIETSVMMGLNLSQSANDMHIRIQLQRYAQAIGLAFQVQDDILDVIGETEKIGKQVGA 240
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D K+TYPKL+G++G+K+ A++L +A LA +A L L +FI+
Sbjct: 241 DEYLHKSTYPKLLGLEGAKQKAQDLYEQALDALAQLSFDTSA-LKALADFII 291
>gi|387818091|ref|YP_005678436.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
gi|322806133|emb|CBZ03701.1| octaprenyl-diphosphate synthase [Clostridium botulinum H04402 065]
Length = 284
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 23 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 82
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 83 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 142
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ KTG I++SI++G I+G +IE + +G
Sbjct: 143 MIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKSSILAGAILGSATYTDIELLGEYGDN 202
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 203 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 245
>gi|381402160|ref|ZP_09927038.1| geranyltranstransferase [Kingella kingae PYKK081]
gi|380832848|gb|EIC12738.1| geranyltranstransferase [Kingella kingae PYKK081]
Length = 295
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 16 VNEYKALKAKQINEA---LDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMI 69
+N+ K + + + +A L +P+ P LHEAMRYS L GGKRL L +A+ E+
Sbjct: 1 MNDLKVWQNQAVEQAERILQTVLPISQVAPQTLHEAMRYSTLDGGKRLRPLLVLAASELG 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
Q+ + A+E + +++ DD+P +DND LRRGKP+ H FGEATA+L AL
Sbjct: 61 NQVQAACEAAMAAVECIHVYSLVHDDMPVMDNDSLRRGKPTCHVQFGEATALLVGDALQT 120
Query: 130 LAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA ++ + K + A GS G+A GQ +D+ + G+++S +EL F+H K
Sbjct: 121 LAFDILSTETELSTARQLRMVKVLAQASGSLGMAGGQAVDLGNVGRDLSQTELEFMHSLK 180
Query: 180 TGKFIEASI-VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
TG I A++ + G+ N+E++ + + +G+A+Q+ +D++D KT G+
Sbjct: 181 TGALIRAAVALGGLSCPDLNDEQLAHLDVYASKLGLAFQVIDDVLDCEADTATLGKTAGK 240
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
D +K TY KL+G+ ++ +A++L+A+A L FD TRA L L F+V+
Sbjct: 241 DADANKPTYVKLMGLQAARAYAEQLVAQAIDALQTFD-TRADHLRTLAQFVVA 292
>gi|333901950|ref|YP_004475823.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
gi|333117215|gb|AEF23729.1| Geranyltranstransferase [Pseudomonas fulva 12-X]
Length = 295
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ Y+A KQ++ AL+ P + L+ AMRYS+ GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQKQVDAALEPLFTAPRAELERLYAAMRYSVFNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A ACA+EL+ +++ DDLP +D+DDLRRG+P+ H F EATAILA L LA
Sbjct: 62 PAQADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHIAFDEATAILAGDGLQSLAF 121
Query: 133 Q---------HIAIIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
H A I+ + + A G G+ GQ +D+ S G+++ L +HRHKT
Sbjct: 122 DVLANTRHNPHSAEIRLSMFQALAQAAGPAGMVGGQAIDLGSVGQQLQQPALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEA++ G + G +E+ + + + + VG+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEAAVRLGALASGRADEQALTALSTYARAVGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
DK TYP L+G+ +K +A EL +A Q L FD A PL L +IV N
Sbjct: 242 QANDKPTYPALLGMAAAKAYALELRDQALQALQPFDDA-AEPLRELARYIVERRN 295
>gi|430821353|ref|ZP_19439964.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430829524|ref|ZP_19447617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430869899|ref|ZP_19483054.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|431745460|ref|ZP_19534304.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
gi|430438616|gb|ELA49033.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0045]
gi|430480963|gb|ELA58134.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0269]
gi|430559276|gb|ELA98635.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1575]
gi|430610216|gb|ELB47368.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2134]
Length = 296
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L++AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ ++K A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTRKALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|33152401|ref|NP_873754.1| farnesyl-diphosphate synthase [Haemophilus ducreyi 35000HP]
gi|33148624|gb|AAP96143.1| geranyltranstransferase [Haemophilus ducreyi 35000HP]
Length = 308
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 154/265 (58%), Gaps = 15/265 (5%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L++AM Y+ L GGKR+ L + +M+G + A AIE + +++ DDLP +DN
Sbjct: 45 LNQAMAYAVLLGGKRIRPFLMYTTGKMLGVPLTTLDHSAAAIEAIHAYSLVHDDLPAMDN 104
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D LRRGKP+ H F EATAILA AL LA + IA + + + +++A G++G
Sbjct: 105 DQLRRGKPTCHIAFDEATAILAGNALQALAFELIANAPHLTDWQKVQQIRTLSTAAGAKG 164
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG--GGNEEEIERMRNFG 209
+ GQ +D+ +E K ++L+EL IHRHKTG I AS++ V + N + + +
Sbjct: 165 MCLGQNLDLLAENKSLNLTELEQIHRHKTGALIVASVLMAVNLSDHAQNNAIKQPLERYA 224
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+A+Q+ +DI+DVIG + KT G D K+TYPKL+G+ +K+ A++L A
Sbjct: 225 QAIGLAFQVQDDILDVIGQTDKIGKTVGADQQLHKSTYPKLLGLTQAKQKAQDLHQTALN 284
Query: 269 ELAYFDPTRAAPLDHLVNFIVSFGN 293
LA P ++ L L +FI+ N
Sbjct: 285 ALAEL-PFKSTALKELADFIIHREN 308
>gi|398874775|ref|ZP_10629975.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM74]
gi|398193998|gb|EJM81083.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM74]
Length = 295
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSASSQARVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + +++ + + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTLDTEIHLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|168180471|ref|ZP_02615135.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
gi|182668864|gb|EDT80842.1| geranyltranstransferase [Clostridium botulinum NCTC 2916]
Length = 290
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKAVKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K + L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSIPLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + ++T D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKETKSDEDNHKTTFVKVYGIE 251
>gi|388567037|ref|ZP_10153476.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
gi|388265742|gb|EIK91293.1| farnesyl-diphosphate synthase [Hydrogenophaga sp. PBC]
Length = 327
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 161/284 (56%), Gaps = 13/284 (4%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVA 76
+++A++ + +AL VP PA L +AMRY+ L GGKRL L +A+CE +GG A
Sbjct: 39 QWRAVQQAAVEQALSRWVPSDAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGQADAA 98
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI- 135
M AC++EL+ +++ DD+PC+DND LRRGKP+ H FGEA A+LA AL LA + +
Sbjct: 99 MRAACSVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGEAQALLAGDALQALAFELLV 158
Query: 136 ----AIIKAKN------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
++ A + + A G++G+A GQ +D+ S G + L+ L +HR KTG ++
Sbjct: 159 PGDGSLADAMSARLCRLLALAAGADGMAGGQAVDLASVGIALDLAALEAMHRRKTGALLQ 218
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKA 244
AS+ G G + + + +G VG+A+Q+ +DI+DV KT G+D DK
Sbjct: 219 ASVTMGAATGVVARDTLAALTEYGACVGLAFQVVDDILDVTADSSTLGKTAGKDAAADKP 278
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
T+ L+G+ ++ +A ++A A L R L L +++
Sbjct: 279 TFVSLMGLGPAQAYADNVLARAHAALGRSGLERPGTLHALADWV 322
>gi|398879895|ref|ZP_10634976.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM67]
gi|398195213|gb|EJM82264.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM67]
Length = 295
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 166/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + ++ + + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSSSDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|452974989|gb|EME74808.1| (2E,6E)-farnesyl diphosphate synthase IspA [Bacillus sonorensis
L12]
Length = 296
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/246 (41%), Positives = 155/246 (63%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P+ L ++M YSL GGKRL L +A G + + + CA+E++ T ++I DD
Sbjct: 27 LQAPSTLKQSMLYSLEAGGKRLRPILVLALLHAYGKKEEDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---------AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHK++GEATA+LA AL + + I A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKIYGEATAVLAGDALLTESFKMITTHVSAEVPAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQI+D+ +E K VSL EL IH KT K + S+++G I+ EEEIE
Sbjct: 147 ISAAGAEGMVGGQILDMEAESKPVSLQELQSIHEGKTAKLLSFSVIAGAILADAPEEEIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++R F ++G+ +Q+ +DI+D+ GS + + ++ G D K+TYP L+ ++G+K+ E
Sbjct: 207 KLREFSHHIGIGFQIRDDILDLEGSEDKIGKRIGSDTSNGKSTYPSLLSLEGAKQKLDEH 266
Query: 263 IAEAKQ 268
I +AKQ
Sbjct: 267 IKKAKQ 272
>gi|295706547|ref|YP_003599622.1| geranyltranstransferase [Bacillus megaterium DSM 319]
gi|294804206|gb|ADF41272.1| geranyltranstransferase [Bacillus megaterium DSM 319]
Length = 298
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 15/257 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ 73
+ EY + ++ L E V H P L E+M YSL GGKRL L A+ G +
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S+ + ACA+E++ T ++I DDLP +D+DDLRRGKP+NHKV+GEATAILA AL + Q
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
I+ I S A G+EG+ +GQ+ D+ E K+++L EL +IH HKTG
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
K + + +G I+ + E + F K+VG+A+Q+ +DI+DV GS E + + G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 241 RDKATYPKLVGIDGSKK 257
+K TYP L+G++ +K+
Sbjct: 247 NEKTTYPSLLGMEAAKE 263
>gi|394988076|ref|ZP_10380914.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
gi|393792534|dbj|GAB70553.1| hypothetical protein SCD_00477 [Sulfuricella denitrificans skB26]
Length = 296
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 160/287 (55%), Gaps = 17/287 (5%)
Query: 19 YKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSV 75
+ K +++ + L + +P P LH+AMRY L GGKR+ L A+ E++G
Sbjct: 7 WAVAKQQRMEDVLSDVLPQSSIAPQRLHQAMRYVVLGGGKRIRPLLAFAAGEVVGAGPQC 66
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
+ A A+EL+ +++ DDLPC+D+D LRRGKP+ H + EATA+L +L LA Q +
Sbjct: 67 VDAAAAAVELIHAYSLVHDDLPCMDDDSLRRGKPTCHHEYDEATALLVGDSLQTLAFQVL 126
Query: 136 A-----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
A + K + A GS G+A GQ +D S GK +SL EL F+H HKTG I
Sbjct: 127 ADRPLADAPAVQLEMMKILAVAAGSRGMAGGQAIDGESVGKTLSLPELEFMHIHKTGALI 186
Query: 185 EASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRD 242
AS+ G + G G E E+E + ++ K +G+A+Q+ +D++D + KT G+D +
Sbjct: 187 RASVQLGALCGKGLENSEMEHLLHYAKCIGLAFQVVDDVLDAESNTATLGKTAGKDAEAN 246
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K TY ++G + ++ A +L +A Q L F RA L + +FIV
Sbjct: 247 KPTYVSILGANAARAFAADLHRDALQSLEVFG-ARAERLRQIADFIV 292
>gi|424836170|ref|ZP_18260827.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
gi|365977572|gb|EHN13671.1| geranyltranstransferase [Clostridium sporogenes PA 3679]
Length = 290
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++E+M YSL GGKR+ L + + + A+ +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYESMAYSLEAGGKRIRPILFLNTYSLYKEDYKQAIPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFDYSLKNGENALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMHKKKTGALIKASILAGAILGSATSTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + +KT D K T+ K+ G++
Sbjct: 209 LGLAFQIKDDILDVEGDITTLGKKTKSDEDNHKTTFVKVYGVE 251
>gi|294501200|ref|YP_003564900.1| geranyltranstransferase [Bacillus megaterium QM B1551]
gi|294351137|gb|ADE71466.1| geranyltranstransferase [Bacillus megaterium QM B1551]
Length = 298
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 15/257 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ 73
+ EY + ++ L E V H P L E+M YSL GGKRL L A+ G +
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S+ + ACA+E++ T ++I DDLP +D+DDLRRGKP+NHKV+GEATAILA AL + Q
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
I+ I S A G+EG+ +GQ+ D+ E K+++L EL +IH HKTG
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
K + + +G I+ + E + F K+VG+A+Q+ +DI+DV GS E + + G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQELLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 241 RDKATYPKLVGIDGSKK 257
+K TYP L+G++ +K+
Sbjct: 247 NEKTTYPSLLGMEAAKE 263
>gi|253995978|ref|YP_003048042.1| polyprenyl synthetase [Methylotenera mobilis JLW8]
gi|253982657|gb|ACT47515.1| Polyprenyl synthetase [Methylotenera mobilis JLW8]
Length = 303
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 165/286 (57%), Gaps = 24/286 (8%)
Query: 23 KAKQ--INEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM 77
KAKQ I LDEA+P P +LH+AMRYSL GGKR+ + LC A+ E+ + ++A
Sbjct: 19 KAKQGHIEIVLDEALPSETTAPQVLHDAMRYSLLGGGKRVRALLCYAAAELCATNATIAD 78
Query: 78 SMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM----- 132
+ ACA+E++ +++ DD+PC+DNDDLRRGKPS HK + +ATA+L AL LA
Sbjct: 79 AAACAVEMIHAYSLVHDDMPCMDNDDLRRGKPSCHKQYDDATALLVGDALQSLAFDVLST 138
Query: 133 --------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
Q I+++ + A GS G+A GQ +D+ S GK +S EL +H+ KTG I
Sbjct: 139 PTLCESANQQISMLNI--LAKASGSLGMAGGQAIDLASVGKALSQHELENMHKLKTGALI 196
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
+A+ + G G E++ + + +++G+A+Q+ +DI+DV KT G+D +K
Sbjct: 197 QAAALLGA--SSGTAEQMSAVIVYAEHIGLAFQVVDDILDVEADTSTLGKTAGKDADSNK 254
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TY ++G+D +KK A +L A L F A L L FI+
Sbjct: 255 PTYVTILGLDQAKKLADQLYETAISALTPF-GNDAKRLRELAGFIL 299
>gi|227544389|ref|ZP_03974438.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|338202544|ref|YP_004648689.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
gi|227185652|gb|EEI65723.1| geranyltranstransferase [Lactobacillus reuteri CF48-3A]
gi|336447784|gb|AEI56399.1| geranyltranstransferase [Lactobacillus reuteri SD2112]
Length = 290
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 143/240 (59%), Gaps = 12/240 (5%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPC 98
A L +M YSL GGKRL L + + EM+GG+ + A A+ELL T ++I DDLP
Sbjct: 27 ATLESSMSYSLMAGGKRLRPALTLTTIEMLGGTLNDDLLRAASALELLHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAI------IKAK---NINSAVGS 149
+DNDDLRRGKP+NH FG A LA L LA Q +A ++++ + A G
Sbjct: 87 MDNDDLRRGKPTNHCKFGAGMATLAGDGLLTLAFQWVADNHLPANVRSQLTLELAKAAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ AGQ DI E + ++L++L ++HR KTG+ I ++++G I+ + E + + FG
Sbjct: 147 SGMVAGQARDIEGEHQHLNLNQLKYLHRQKTGELIRYAVLAGGIMMDQSAEIKQELAAFG 206
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+++D++DV+ + EM + +D K TYP L+GIDG+K+ + + A Q
Sbjct: 207 ENYGLAFQIYDDLMDVLSTTEEMGKAVRKDADEQKNTYPGLLGIDGAKEQLQIALTAASQ 266
>gi|410091965|ref|ZP_11288509.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
gi|409760708|gb|EKN45832.1| geranyltranstransferase [Pseudomonas viridiflava UASWS0038]
Length = 295
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 166/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P + L++AMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQARVNAALEGLFQAPTPELTRLYDAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI------------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + +A G G+ GQ +D+ S G ++ + L ++HRHKT
Sbjct: 122 TALLAPNLTSRDAQTRLQMVSTLATAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G ++ +++ ++ + + VG+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGRADQTQLDALQVYARAVGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A L F A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKGYALELRDQALTALDLFS-NAAEPLRELARYIV 291
>gi|124267817|ref|YP_001021821.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
gi|124260592|gb|ABM95586.1| farnesyl-diphosphate synthase [Methylibium petroleiphilum PM1]
Length = 297
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 167/292 (57%), Gaps = 14/292 (4%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
K + + + + +Q+ AL+ VP PA L +AMRY L GGKRL L +++ E +G
Sbjct: 2 KRDEFDTWSRDRLEQVEAALERWVPALAPAGLGDAMRYGVLDGGKRLRPLLVLSAAEAVG 61
Query: 71 GSQS-VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
+ S A+ AC++EL+ ++I DD+PC+D+D LRRGKP+ H FG+A A+LA A+
Sbjct: 62 ATDSEAALRAACSVELIHAYSLIHDDMPCMDDDVLRRGKPTVHVKFGQAQAMLAGDAMQA 121
Query: 130 LAMQHIA--------IIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
LA + + ++A+ + A G +G+A GQ +D+ S G+ + L+ +HR
Sbjct: 122 LAFEVLTPEDDSVPLALQARLCGLLARAAGQDGMAGGQAIDLASIGRPLDEQSLSDMHRR 181
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GR 237
KTG ++AS++ G G + + + + +G +G+A+Q+ +DI+DV + KT G+
Sbjct: 182 KTGALLQASVMMGAACGDASPQARQALSEYGAALGLAFQVVDDILDVTQASSTLGKTAGK 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D ++K TY ++G+ +++ A+ L +A+ LA AA L L + +V
Sbjct: 242 DADQNKPTYVTVLGLSAAQRRAQTLREQAQAALARSGLPDAAWLSVLADKVV 293
>gi|171915589|ref|ZP_02931059.1| geranylgeranyl pyrophosphate synthase [Verrucomicrobium spinosum
DSM 4136]
Length = 295
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ Y + ++ ALD A P +H+AMR+SL GGKRL LC+A+ E GGS
Sbjct: 5 LKSYLTQRVAFVDAALDRFVAAAETRPVTIHKAMRHSLFAGGKRLRPILCLAAAEACGGS 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+E L T ++I DDLPC+D+DD+RRG P+ HKVFGEA A+LA AL L+
Sbjct: 65 LENALYAACAVECLHTYSLIHDDLPCMDDDDMRRGVPTCHKVFGEAMALLAGDALQALSF 124
Query: 133 QHIAIIKAKNINS----------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+ +A + +S GS + GQ+ D+ EGK++ + +L +IH KT
Sbjct: 125 ELVAQTPVTHRHSPAAMVLELARTAGSLHLVGGQVADLEGEGKKLGIEDLRYIHESKTAA 184
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMR 241
+ +S+ G + ++++ + +FG G+A+Q+ +DI+DV + E + + G+D+
Sbjct: 185 LLTSSVKLGGMSADAQLDQVQALHDFGMATGLAFQIIDDILDVTQTTEKLGKSAGKDVAS 244
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDP 275
+K+TYP L+G+D S+ A L +A+Q L F P
Sbjct: 245 EKSTYPALMGLDASRDEAHRLTGKARQALEVFGP 278
>gi|302392484|ref|YP_003828304.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
gi|302204561|gb|ADL13239.1| farnesyl-diphosphate synthase [Acetohalobium arabaticum DSM 5501]
Length = 295
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 179/291 (61%), Gaps = 17/291 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVPL--PHPAILHEAMRYS-LPGGKRLMSTLC-IASCEMIG 70
++N++ KA+ +N+ALD+ +P PA LH++MRYS L GGKRL L I + + G
Sbjct: 2 EINDFLVAKAEAVNKALDDYLPAEDKKPAKLHQSMRYSTLMGGKRLRPVLTLIVANSLFG 61
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCL 130
+ M A A+EL+ ++I DDLPC+D+DD RRG+ +NHKVFG+A A+L+ AL
Sbjct: 62 VEEERIMPAAAAVELVHNYSLIHDDLPCMDDDDYRRGELANHKVFGDAIAVLSGDALLTY 121
Query: 131 AMQHIA----------IIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
A + + I+K +K + G G+ GQ D+ +EGK V +L FIHR+K
Sbjct: 122 AFELLTKLEGDFTAEQILKVSKEVAQGAGFRGMVGGQAADMLAEGKAVEDIDLEFIHRYK 181
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
TG ++A++ +G I+GG ++EE+ + + + +G+++Q+ +DI+D++G E + ++ G D
Sbjct: 182 TGALLQAAVRTGAILGGADKEELAALTIYAENIGLSFQIIDDILDIVGDEEKLGKEVGSD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DKAT+P + G++ S+ A++ + AK+ + F+ A L L ++I+
Sbjct: 242 EGQDKATFPSVYGLEESRAMAQKKVQAAKEAIERFEED-AELLIQLADYII 291
>gi|196230692|ref|ZP_03129553.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
gi|196225033|gb|EDY19542.1| Polyprenyl synthetase [Chthoniobacter flavus Ellin428]
Length = 293
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 168/289 (58%), Gaps = 15/289 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG 71
++ Y + K I++ALD +P P +H+AMRYSL GGKRL L +A+ E G
Sbjct: 2 ELKSYLTARGKLIDQALDRFLPRASVKPRTIHKAMRYSLFAGGKRLRPALTLAAAEACDG 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A+ ACA+E + T ++I DDLPC+D+DDLRRG+P++HKVFGE A+LA AL +A
Sbjct: 62 EVARALPAACAVECIHTYSLIHDDLPCMDDDDLRRGRPTSHKVFGEGVAVLAGDALLTIA 121
Query: 132 MQHIAIIKAKN----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+ +A K + + A GS+ + GQ+ D+ EGK++S +EL +IHR KT
Sbjct: 122 FEILAQAKETSRYKMPALIGELAGASGSQWLIGGQVADLEGEGKKISGAELKYIHRCKTA 181
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
+ ASI G + + ++ + FG+ +G+A+Q+ +DI+DV + E KT G+D+
Sbjct: 182 ALLTASIRLGGMSANASPARLKNLTEFGQSLGLAFQVIDDILDVTQTTEKLGKTAGKDVA 241
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
KATYP + G++ S++ A L A L F + A L ++++
Sbjct: 242 ATKATYPAIFGLERSREEAHRLTLAAHAALKPFGKS-GATLRAFADYLL 289
>gi|197284007|ref|YP_002149879.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227358123|ref|ZP_03842464.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|425066900|ref|ZP_18470016.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
gi|194681494|emb|CAR40356.1| geranyltranstransferase [Proteus mirabilis HI4320]
gi|227161459|gb|EEI46496.1| geranyltranstransferase [Proteus mirabilis ATCC 29906]
gi|404601571|gb|EKB01963.1| hypothetical protein HMPREF1311_00031 [Proteus mirabilis WGLW6]
Length = 307
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 159/288 (55%), Gaps = 19/288 (6%)
Query: 25 KQINEALDEAV-PLPHPAI-LHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++++EAL++A+ LP + L +AMRY +L GGKRL L A EM + A
Sbjct: 20 QRVDEALNQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVYAVGEMFNVPVANLDVPAA 79
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
AIE + ++I DDLP +DNDDLRRGKP+ H FGEA AILA AL LA + +A
Sbjct: 80 AIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILAKNAMP 139
Query: 137 -------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + +A G G+ GQ +D+++E K + L L IH HKTG I A++
Sbjct: 140 DVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALIRAAVR 199
Query: 190 SGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYP 247
G + G ++ + + +G+A+Q+ +DI+DVIGS E ++ G D K+TYP
Sbjct: 200 LGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAGKSTYP 259
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIVSFGN 293
L+G+ ++K A+EL EA LA+ + + L L NFIV N
Sbjct: 260 ALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANFIVERKN 307
>gi|170757695|ref|YP_001781434.1| geranyltranstransferase [Clostridium botulinum B1 str. Okra]
gi|169122907|gb|ACA46743.1| putative geranyltranstransferase [Clostridium botulinum B1 str.
Okra]
Length = 290
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 136/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAEVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K ++L EL ++H+ KTG I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSITLDELYYMHKKKTGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|108804293|ref|YP_644230.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
gi|108765536|gb|ABG04418.1| farnesyl-diphosphate synthase [Rubrobacter xylanophilus DSM 9941]
Length = 299
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 147/271 (54%), Gaps = 16/271 (5%)
Query: 39 HPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
PA+ L EAMRYSL GGKR+ LC+ S + G + A AIEL+ T ++I DD
Sbjct: 29 EPALERLQEAMRYSLLAGGKRVRPLLCMESARLFGAPPERVLPSAAAIELIHTYSLIHDD 88
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK----------AKNINS 145
LP +DNDD RRG+P++HK FGEA AILA A A+ I + + + + S
Sbjct: 89 LPAMDNDDFRRGRPTSHKKFGEAMAILAGDAFFGEALTLITVRQEGTCEQRLGVVQELAS 148
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSE--LNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
+ G G+ GQ++D++ G S L IHR+KTG I +S G I+ G EE +E
Sbjct: 149 STGVNGMVGGQVLDMDQTGAGGSADPGMLFMIHRYKTGALIRSSARVGAILAGAGEEGLE 208
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + +G+ +Q+ +D++D +GS E + ++ G D R KAT+ + G++G+++ A
Sbjct: 209 AISRYATELGLCFQIVDDVLDAVGSSERLGKRAGGDAERGKATFVSVFGLEGARREADAA 268
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A + L + + L L F+ G+
Sbjct: 269 CERALRALGRLEGRDTSALGELALFVRHRGS 299
>gi|225848385|ref|YP_002728548.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643069|gb|ACN98119.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 288
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 160/269 (59%), Gaps = 19/269 (7%)
Query: 19 YKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVA- 76
Y KA+ IN L +P P L +AM YSL GGKR+ L I S + + +
Sbjct: 7 YLKQKAELINTYLKNLIPKGTPKELFDAMEYSLTVGGKRIRPILIIESSKAVNPDVDIED 66
Query: 77 -MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
+ +A ++E + T ++I DDLP +D+DDLRRGKP+ HKVFGEA AILA L A + I
Sbjct: 67 FIDVALSVEFIHTYSLIHDDLPAMDDDDLRRGKPTCHKVFGEAIAILAGDGLLTYAFELI 126
Query: 136 A---------IIKAKN-INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+ ++K N I+++VG G+ GQ DI K++ +FIH HKT KFI
Sbjct: 127 SGNQKITPDKLLKVINVISNSVGVYGMVGGQAGDILENFKDI-----DFIHTHKTAKFIS 181
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKA 244
G I+ G +++EIE ++N+G Y+G+A+Q+W+DI+D IG E + +K +D ++K
Sbjct: 182 GCCQVGGILAGASKKEIENLKNYGLYIGIAFQIWDDILDEIGDEEKVGKKLHKDKEKNKI 241
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYF 273
TYP + G+D S K AK+ + +AKQE+ Y
Sbjct: 242 TYPSVYGLDNSIKMAKDYVEKAKQEVKYL 270
>gi|150390268|ref|YP_001320317.1| polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
gi|149950130|gb|ABR48658.1| Polyprenyl synthetase [Alkaliphilus metalliredigens QYMF]
Length = 295
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 19/288 (6%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA 76
EY+ L K+++ LD V + +AMRYS+ GGKRL + IA+ + +
Sbjct: 9 EYQILTDKKLHHYLD--VKEDKNKTVIDAMRYSIFAGGKRLRPIVAIATYNLFKDNLEEV 66
Query: 77 MSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA 136
+ ACA+E++ T ++I DDLP +D+D+ RRGK +NHKV+GE AILA AL A + I
Sbjct: 67 LPYACALEMIHTYSLIHDDLPAMDDDNYRRGKLTNHKVYGEGIAILAGDALLNYAFE-IM 125
Query: 137 IIKAKN-------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
I A+ I A G G+ GQ++D+ SE K+V + LN+IH +KT
Sbjct: 126 ISHARTQSNANVHLQAIEEIAKAAGMNGMIGGQVVDLESENKQVDKNTLNYIHYNKTAAL 185
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRD 242
I ++ G II E +I M + GK +G+A+Q+ +DI+D+IG ++ + G D+ +
Sbjct: 186 IISAFKVGAIIAEATETDIAHMNSLGKNIGLAFQIQDDILDIIGDEKKLGKDIGSDVENN 245
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K+TYP L G+ S K L + L + R+ L L +++V+
Sbjct: 246 KSTYPSLYGLQTSIDEVKRLTTNVDKVLNIY-GKRSRFLHDLSHYLVN 292
>gi|218778692|ref|YP_002430010.1| polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760076|gb|ACL02542.1| Polyprenyl synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 307
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 161/268 (60%), Gaps = 16/268 (5%)
Query: 38 PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDL 96
P + + +AMR+SL GGKRL LC+ S E +GG++ M +A A+E + T ++I DDL
Sbjct: 38 PEESRVTQAMRHSLFAGGKRLRPILCMTSAEAVGGNKDHVMDVAAALEFIHTYSLIHDDL 97
Query: 97 PCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ---HIA---IIKAK-------NI 143
P LD+DD RRG P+ HK F EATAILA L A + H A ++ A+ I
Sbjct: 98 PALDDDDYRRGTPTCHKAFDEATAILAGDGLLTSAFEILSHAADDGLLPAEKVLTIIAGI 157
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
+ A G G+ GQ++DI E + ++ EL IH +KTG IE S+ SG +GGG E+I
Sbjct: 158 SHAAGCNGMILGQMLDIEGEHESLTREELEDIHNNKTGAMIEVSVFSGAYLGGGTPEQIA 217
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + K VG+A+Q+ +DI++VIG P+ M + G D K+TYP L+G+DG++ A+ L
Sbjct: 218 ALDVYAKNVGLAFQVIDDILNVIGDPKVMGKAVGTDAELGKSTYPALMGLDGAQDFAERL 277
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
I +A Q + FD + PL + +I++
Sbjct: 278 INKALQAIVSFD-NKCDPLRSIATYILT 304
>gi|320529116|ref|ZP_08030208.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
gi|320138746|gb|EFW30636.1| putative geranyltranstransferase [Selenomonas artemidis F0399]
Length = 295
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 150/261 (57%), Gaps = 17/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +M YSL GGKRL L +A+ + +G + ++ ACA+E++ T ++I DDLP +DN
Sbjct: 34 LRASMAYSLMAGGKRLRPILLMAAADAVGVDGTKFITAACALEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNI------------NSAVGS 149
DD RRGK +NHKV+ E TAILA AL LA I++ +++ A G+
Sbjct: 94 DDYRRGKLTNHKVYDEGTAILAGDALLTLAF--TVILRQQDVPAERLLRVVDETGRAAGA 151
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E + +S+ EL +H KTG A++ G I+ G +E ++ + +
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRCGAILAGASERQLAALTAYA 211
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DVIG+ E + + G D K+TY L +D ++ A++ + A
Sbjct: 212 DHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVESAAD 271
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L F AA L LV ++V
Sbjct: 272 ALHIFGD-EAAFLRELVLYLV 291
>gi|430824050|ref|ZP_19442617.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430867363|ref|ZP_19482357.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|431743222|ref|ZP_19532102.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
gi|430441434|gb|ELA51531.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0120]
gi|430550374|gb|ELA90170.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1574]
gi|430607056|gb|ELB44384.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2071]
Length = 296
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L++AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG I ++++G I+ EE I ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++ A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|28211243|ref|NP_782187.1| geranylgeranyl pyrophosphate synthase [Clostridium tetani E88]
gi|28203683|gb|AAO36124.1| geranyltranstransferase [Clostridium tetani E88]
Length = 288
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 141/234 (60%), Gaps = 13/234 (5%)
Query: 43 LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YS+ GGKR+ L + + ++ + A+S+ACAIE++ T ++I DDLPC+D
Sbjct: 28 VYEAMSYSVNIGGKRIRPILALITYKIYNKNYKEALSIACAIEMIHTYSLIHDDLPCMD- 86
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHI----------AIIKAKNINSAVGSEG 151
DDLRRGKP+NHKVFG+ A+LA L A I + I A G EG
Sbjct: 87 DDLRRGKPTNHKVFGDGLAVLAGDGLLNEAFNIILKNGCQKGMTWVEAGYEIGKASGVEG 146
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++D+ + K + + EL++IH KT I ASI++G I+G NE++ ++ FGK
Sbjct: 147 MIGGQVVDVLNTNKSIEIEELDYIHEKKTAALITASIMTGAILGEANEKDTTILKEFGKK 206
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+G+A+Q+ +DI+D+ KT G+D ++K T+ K G++ KK K+L +
Sbjct: 207 LGLAFQIKDDILDIESDTRKLGKTIGKDKEQNKNTFVKFYGLEKCKKMCKDLTS 260
>gi|398807911|ref|ZP_10566781.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
gi|398088542|gb|EJL79100.1| geranylgeranyl pyrophosphate synthase [Variovorax sp. CF313]
Length = 306
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 148/248 (59%), Gaps = 13/248 (5%)
Query: 27 INEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIEL 85
+ AL V + P +L +AMRY+ L GGKRL L +A+ E +GG+Q+ A+ ACA EL
Sbjct: 27 VEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNQAAALRAACATEL 86
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------AI 137
+ +++ DDLPC+DND LRRGKP+ H FGEA A+LA AL LA + + A
Sbjct: 87 IHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPDGDEIPAA 146
Query: 138 IKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVII 194
+A + + A GS+G+A GQ +D+ S G ++ ++L +HR KTG ++ S+ G
Sbjct: 147 TQAQLCRLLARAAGSQGMAGGQAIDLASVGIALNEAQLREMHRLKTGALLQGSVEMGAAC 206
Query: 195 GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGID 253
G + +R++G +G+A+Q+ +DI+DV KT G+D DK TY L+G+D
Sbjct: 207 GSLAGSALAALRDYGAAIGLAFQVVDDILDVTADSHTLGKTAGKDAAADKPTYVSLLGLD 266
Query: 254 GSKKHAKE 261
G++ A++
Sbjct: 267 GARAQARQ 274
>gi|283834262|ref|ZP_06354003.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
gi|291069784|gb|EFE07893.1| geranyltranstransferase [Citrobacter youngae ATCC 29220]
Length = 299
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 159/286 (55%), Gaps = 23/286 (8%)
Query: 25 KQINEALDEAV-PLPH---PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSM 79
+Q N+AL + PLP P + E M+Y +L GGKRL L A+ +M G S S +
Sbjct: 12 EQANQALSRFIAPLPFQNTPVV--ETMQYGALLGGKRLRPFLVYATGQMFGVSLSTLDAP 69
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
A A+E + +++ DDLP +DNDDLRRG P+ H FGEA AILA AL LA I+
Sbjct: 70 AAAVECIHAYSLMHDDLPAMDNDDLRRGLPTCHVKFGEANAILAGDALQTLAFSIISDAP 129
Query: 137 ---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
I + A G G+ GQ +D+ +EG +V L L IHRHKTG I A+
Sbjct: 130 MPEVADRDRIAMLSELAQASGIAGMCGGQALDLEAEGHQVELDALERIHRHKTGALIRAA 189
Query: 188 IVSGVIIGGGNEEE-IERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKAT 245
+ G + G E + + + + +G+A+Q+ +DI+DV+G + + ++ G D K+T
Sbjct: 190 VRLGALSAGDKGRECLAILDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKST 249
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYF--DPTRAAPLDHLVNFIV 289
YP L+G++ ++ A++LI +A+Q L+ + L+ L ++I+
Sbjct: 250 YPALLGLEQARNKARDLIEDARQSLSLLAAQSLDTSALEALADYII 295
>gi|430748056|ref|YP_007207185.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
gi|430019776|gb|AGA31490.1| geranylgeranyl pyrophosphate synthase [Singulisphaera acidiphila
DSM 18658]
Length = 340
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 167/289 (57%), Gaps = 22/289 (7%)
Query: 1 IINSQRNDTLPKFFQVNEYKALKAKQINEALDEAVPLPH------PAILHEAMRYS-LPG 53
++ S+ ++ P + E + +Q++EAL +P P L EAMRYS L G
Sbjct: 35 MMTSRSIESSPPASFIEEAR----RQVDEALRRYLPASEDAGALCPPRLSEAMRYSVLGG 90
Query: 54 GKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHK 113
GKRL LC+ + E G S A+ ACA+EL+ T ++I DDLP +D+DDLRRG+P+ HK
Sbjct: 91 GKRLRPILCLLAAEACGADPSAALPAACALELVHTYSLIHDDLPAMDDDDLRRGRPTCHK 150
Query: 114 VFGEATAILACQALHCLAM----QHI-----AIIKAKNINSAVGSEGIAAGQIMDINSEG 164
F EATA+LA L LA QH+ A+ + + G G+ GQ+ D+ +EG
Sbjct: 151 AFDEATAVLAGDGLLTLAFEILAQHVRPAEAAVACVQALAEGAGPSGMVGGQMADLEAEG 210
Query: 165 K-EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIV 223
+ + SL L IHR KTG + AS+ G ++ G +E + + +G VG+A+Q+ +D++
Sbjct: 211 RNDPSLEALESIHRRKTGALLRASLRMGGLVAGADETSLHALNIYGGAVGLAFQIIDDLL 270
Query: 224 DVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
DV G ++ ++ G+D K TYP L+GI+GS++ AK+L EA LA
Sbjct: 271 DVQGDETKLGKRVGKDSGLGKWTYPGLLGIEGSRQRAKQLADEAVAALA 319
>gi|407473843|ref|YP_006788243.1| polyprenyl synthetase [Clostridium acidurici 9a]
gi|407050351|gb|AFS78396.1| polyprenyl synthetase [Clostridium acidurici 9a]
Length = 298
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 145/261 (55%), Gaps = 16/261 (6%)
Query: 45 EAMRYS-LPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVIQDDLPCLDND 102
E+M+YS L GGKR+ L + + E++ S A+ A AIE++ T ++I DDLP +DND
Sbjct: 34 ESMKYSILAGGKRIRPILTLKAFELVSKSSFEKALPFASAIEMIHTYSLIHDDLPPMDND 93
Query: 103 DLRRGKPSNHKVFGEATAILACQALHCLAMQHI------------AIIKA-KNINSAVGS 149
D RRGKP+NHKV+GEA AILA AL A + + IKA K I A G
Sbjct: 94 DFRRGKPTNHKVYGEAMAILAGDALLNFAYETMIESIPETSKDVSGYIKAIKEIGKAAGV 153
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
G+ GQ++DI S+ +S +L FIH KT IEASI+SG + ++ +I ++ +G
Sbjct: 154 YGMIGGQVVDIISDENIMSEEQLRFIHNKKTSALIEASILSGAFLANASDNQIIALKKYG 213
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ +G+ +Q+ +DI+D IG E + + G D K TY L G++ S + EL EA +
Sbjct: 214 EAIGLCFQIRDDILDKIGDNEKLGKSVGSDEANKKLTYLTLYGMEKSIEKTHELCKEAIE 273
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L FD ++V
Sbjct: 274 ALDIFDSKDTIFFKQFAEYLV 294
>gi|257885167|ref|ZP_05664820.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430853498|ref|ZP_19471226.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|431446004|ref|ZP_19513686.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|431760565|ref|ZP_19549162.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
gi|257821019|gb|EEV48153.1| polyprenyl synthetase [Enterococcus faecium 1,231,501]
gi|430540579|gb|ELA80781.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1258]
gi|430585648|gb|ELB23920.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1630]
gi|430623650|gb|ELB60328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3346]
Length = 296
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/227 (39%), Positives = 142/227 (62%), Gaps = 12/227 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L++AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG I ++++G I+ EE I ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEIILLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK 257
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTRE 257
>gi|354558197|ref|ZP_08977453.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
gi|353548922|gb|EHC18366.1| Polyprenyl synthetase [Desulfitobacterium metallireducens DSM
15288]
Length = 288
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 148/241 (61%), Gaps = 12/241 (4%)
Query: 45 EAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDD 103
++MRYSL GGKR+ L +A+ E +GG + ACA+EL+ T ++I DDLP +DNDD
Sbjct: 29 QSMRYSLVGGGKRIRPVLALAAAEAVGGQADSILPSACALELIHTYSLIHDDLPAMDNDD 88
Query: 104 LRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEGIA 153
RRG+ +NHKVFGE AILA L A + IA + + + A G EG+
Sbjct: 89 YRRGRLANHKVFGEGKAILAGDGLLTYAFELIARPLPVNAERQLRVIQEVAQAAGPEGMV 148
Query: 154 AGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVG 213
GQ++D+ +EGK ++L E+ IH+HKTG + S G I+GGG E +I+ + + + +G
Sbjct: 149 LGQVLDLEAEGKTLTLGEIEQIHQHKTGAMLVVSARMGGILGGGTEAQIQALTRYAQALG 208
Query: 214 MAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAY 272
+A+Q+ +DI+D+ G S + + D+ ++K+TYP L+G+ G+K+ I EA + L+
Sbjct: 209 LAFQIKDDILDLEGDSATLGKPAQSDLEQEKSTYPSLLGLAGAKEELAVKIKEAHEALSV 268
Query: 273 F 273
F
Sbjct: 269 F 269
>gi|299822995|ref|ZP_07054881.1| geranyltranstransferase [Listeria grayi DSM 20601]
gi|299816524|gb|EFI83762.1| geranyltranstransferase [Listeria grayi DSM 20601]
Length = 293
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 156/271 (57%), Gaps = 17/271 (6%)
Query: 10 LPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEM 68
L +F + + K L +Q+ +D V P L +AMRYSL GGKR+ L A+
Sbjct: 4 LEQFLKTS--KQLVDEQLLAEVDARVITP---TLKKAMRYSLEAGGKRIRPILLFATLIS 58
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+ A A+E++ T ++I DDLP +DNDD RRGK +NHKVFG+ATAILA L
Sbjct: 59 LRTELEKGKKTAAALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDATAILAGDGLL 118
Query: 129 CLAMQHIAIIKAKNINSAV----------GSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
LA ++ +A S V G EG+ AGQ DI +E + V+L EL IHR
Sbjct: 119 TLAFSLLSEEEALPAESRVKLIQLFAEHAGPEGMVAGQQADIEAEDRSVTLEELAAIHRK 178
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGR 237
KTG +++++++G II + E E++ + +G+A+Q+ +DI+DV+G + + +K G
Sbjct: 179 KTGALLKSAVLAGAIIANADAETYEKLNIYADNIGVAFQIADDILDVVGDEQKLGKKIGM 238
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
D + K+TYP L+ + G+++ + ++ AK+
Sbjct: 239 DAIMHKSTYPGLLTLVGAQEALNDHVSRAKE 269
>gi|167855502|ref|ZP_02478265.1| geranyltranstransferase [Haemophilus parasuis 29755]
gi|167853368|gb|EDS24619.1| geranyltranstransferase [Haemophilus parasuis 29755]
Length = 297
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 171/298 (57%), Gaps = 23/298 (7%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAI---LHEAMRYS-LPGGKRLMSTLCIASCEM 68
F ++++Y+ ++IN L E + +PA L +AM Y+ L GGKR+ L A+ +M
Sbjct: 6 FAELSQYQ----QRINHFLSEQLS-QYPAYNTPLIDAMSYAVLLGGKRVRPFLIYATGKM 60
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+G + A A+E + +++ DDLP +DND LRRGKP+ H F EATAILA AL
Sbjct: 61 LGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILAGDALQ 120
Query: 129 CLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
A + +A + + + + + G++G+ GQ +D+ SE K ++L EL IHR+
Sbjct: 121 SFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELERIHRN 180
Query: 179 KTGKFIEASIVSGVIIGG-GNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
KTG I AS++ G + + +I +++ + K +G+A+Q+ +DI+DVIG+ E+ KT
Sbjct: 181 KTGALILASVMMGFNLSAYAQDHQIKQQLVQYAKAIGLAFQVQDDILDVIGNSEVIGKTA 240
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G D DK+TYPKL+G++G+K+ A+ L A + L P L L FIV N
Sbjct: 241 GSDQALDKSTYPKLLGLEGAKQKAESLYQTALKALETL-PFDTTALVALAEFIVKREN 297
>gi|187478668|ref|YP_786692.1| geranyltranstransferase [Bordetella avium 197N]
gi|115423254|emb|CAJ49787.1| geranyltranstransferase [Bordetella avium 197N]
Length = 303
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 167/287 (58%), Gaps = 19/287 (6%)
Query: 20 KALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGGSQSV 75
+AL +Q+ E L A + PA LHEAMRY+ L GGKR+ + L A+ C + ++
Sbjct: 15 RALHIEQVLETLMPAADIA-PARLHEAMRYAVLGGGKRVRAALVYAAGQACPVNSSLLAI 73
Query: 76 AMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
SM A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL LA
Sbjct: 74 EASMDRAAAAVELIHAYSLVHDDLPCMDDDTLRRGRPTTHVQFDEATAMLAGDALQPLAF 133
Query: 133 QHIA--------IIKAKNINS-AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
+ +A +++A + + A GS G+A GQ +D++S GK ++ EL +H KTG
Sbjct: 134 ELLAGMPIAPALVVQATQVLARAAGSLGMAGGQAIDLHSVGKRLTRDELQTMHSMKTGAM 193
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRD 242
+ AS+ G ++ G + + + + + VG+A+Q+ +DI+DV S + + G+D + +
Sbjct: 194 LAASVTLGGVVAGASSAVRQALDAYAQAVGLAFQVVDDILDVTADSASLGKTAGKDAVEN 253
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K TY L+G++ +++ A+EL A Q L + A L L +FIV
Sbjct: 254 KPTYVSLLGLEPARELAEELRLAAHQALGPLGDS-GARLAQLADFIV 299
>gi|398910221|ref|ZP_10654917.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM49]
gi|398186483|gb|EJM73857.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM49]
Length = 295
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTSQAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|330445276|ref|ZP_08308928.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489467|dbj|GAA03425.1| geranyltranstransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 300
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 151/271 (55%), Gaps = 21/271 (7%)
Query: 36 PLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
P A++ +AM+Y +L GGKR L + EM+G +Q + A A+E + ++I D
Sbjct: 30 PFADKALI-KAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHAYSLIHD 88
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKAKN 142
DLP +D+D LRRG+P+ H F EATAILA AL LA + +A I
Sbjct: 89 DLPAMDDDALRRGQPTCHIAFDEATAILAGDALQTLAFEILANGQLSQDGNTQRIAMVSE 148
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
+ A G+ G+ GQ +D+ +EGK V L +L IHRHKTG I ++ G + G E+ I
Sbjct: 149 LAKASGAAGMCLGQTLDLEAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAG--EKGI 206
Query: 203 ERMRNFGKY---VGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKH 258
+ KY +G+A+Q+ +DI+DVI E K G D+ DK+TYP L+G+DG+++
Sbjct: 207 AILPQLDKYAEAIGLAFQVQDDILDVISDTETLGKPQGSDLELDKSTYPALLGLDGAQEK 266
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
A+ L EA Q LA P + L+ +I+
Sbjct: 267 AQLLYQEALQALAAI-PYNTSQLEVFARYII 296
>gi|255318787|ref|ZP_05360013.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262378949|ref|ZP_06072106.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|421855820|ref|ZP_16288193.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|255304043|gb|EET83234.1| geranyltranstransferase [Acinetobacter radioresistens SK82]
gi|262300234|gb|EEY88146.1| geranyltranstransferase [Acinetobacter radioresistens SH164]
gi|403188653|dbj|GAB74394.1| geranyltranstransferase [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 302
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 160/277 (57%), Gaps = 24/277 (8%)
Query: 33 EAVPLPHP---AILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVT 88
EA LP P A+ H M GGKR+ LC A+ + S + A AIE++
Sbjct: 28 EAFSLPEPLKSAVYHAVML----GGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHC 83
Query: 89 MAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIK 139
++ DDLPC+DND LRRG+P+ H FGE TA+LA L +A Q +A+ +
Sbjct: 84 YSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQ 143
Query: 140 AKNINS----AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI-VSGVII 194
A + A S + GQ+MD+ +EGK+V S+L IHR+KTG I+A+I ++ V I
Sbjct: 144 AVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQLENIHRNKTGALIQAAIMMAAVTI 203
Query: 195 GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGID 253
G ++ I ++R +G+ +G+A+Q+ +DI+D++ E+ KT G+D +K+TYP L+G++
Sbjct: 204 FNGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLE 263
Query: 254 GSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ +AK+L +A L YF A L+ + F++S
Sbjct: 264 QAQLYAKQLHDQAFSALEYFGEA-AEELNTISRFLLS 299
>gi|145298029|ref|YP_001140870.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361767|ref|ZP_12962414.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142850801|gb|ABO89122.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686883|gb|EHI51473.1| geranyltranstransferase [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 296
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 164/292 (56%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++++ L ++I++ L E++P P L +AMRY L GGKR+ L A EM+G
Sbjct: 3 LDDFSRLHRQRIDDCLSAQLESLPAMAPR-LRDAMRYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ + A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KRELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG+++SL EL +HRHK
Sbjct: 122 FSILADHPLPDRLLANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLPELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + ++ + ++ + +G+A+Q+ +DI+D+ G + + + G
Sbjct: 182 TGALIECAVALGALCKADVDDTTLAALQTYAAAIGLAFQVQDDILDITGDTVTLGKPQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ ++K+TYP L+G+D +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLAQEKSTYPALLGLDNARELARELHGKALTALQSL-PYNTDILEAFADYII 292
>gi|345870699|ref|ZP_08822650.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
gi|343921512|gb|EGV32228.1| Geranyltranstransferase [Thiorhodococcus drewsii AZ1]
Length = 297
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 167/282 (59%), Gaps = 18/282 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLP---HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGG 71
++ ++A +++ LDE +P P PA LHEAMRYS L GKRL L A+ +G
Sbjct: 6 LDAFRARCQARVDTTLDELLP-PVSVEPARLHEAMRYSALSNGKRLRPLLTYAAGAALGI 64
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ ACA+EL+ ++I DDLP +D+DDLRRG+P+ HK + EATAILA AL LA
Sbjct: 65 ESDLLDRPACAVELIHAYSLIHDDLPAMDDDDLRRGRPTCHKAYDEATAILAGDALQTLA 124
Query: 132 MQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
Q ++ ++ + + A G+ G+ GQ MD+ +EGK + ++ L IH HKTG
Sbjct: 125 FQALSEAPGIAAENRVLMVEALARASGARGMVGGQAMDLAAEGKPLDVAMLEHIHIHKTG 184
Query: 182 KFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDM 239
I AS+ G++ G + + +R+ + K +G+A+Q+ +D++DV G + E+ + GRD
Sbjct: 185 ALIRASVQMGMLAHGSLDPDHSQRLDRYAKCLGLAFQIQDDVLDVEGDTAEIGKTAGRDQ 244
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPL 281
+KATYP LVG+ +K+ A LIAEA + F P A PL
Sbjct: 245 ALNKATYPSLVGLTEAKEMAANLIAEALSAIEIF-PAGADPL 285
>gi|406835647|ref|ZP_11095241.1| polyprenyl synthetase [Schlesneria paludicola DSM 18645]
Length = 312
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 157/276 (56%), Gaps = 27/276 (9%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L E+M YSL GGKRL L + +CE GG A+ ACAIE++ T ++I DDLP
Sbjct: 34 PSKLSESMAYSLLAGGKRLRPILVLLACEACGGDSDAALPAACAIEMIHTYSLIHDDLPA 93
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ---------HIAIIKAKNINSAVGS 149
+D+DD RRG+ +NHKV+GEA AILA AL LA + +A ++ SA G
Sbjct: 94 MDDDDYRRGRLTNHKVYGEAMAILAGDALLTLAFEVMARDIQPGGVAAACCADLASAAGW 153
Query: 150 EGIAAGQIMDINSE---------------GKEVSLSELNFIHRHKTGKFIEASIVSGVII 194
G+ GQ+ D+ +E G+ L++L IHR KTG+ + +++ G +
Sbjct: 154 CGMVGGQVADLEAEQQSADRQLGSATDNSGESAGLAQLEAIHRRKTGRLLMSAVTLGARV 213
Query: 195 GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
E + R+ FGK VG+A+Q+ +D++DV G + ++ + G+D K TYP L+GID
Sbjct: 214 AQAKPELVNRLEEFGKRVGLAFQIADDLLDVTGDATKLGKNVGKDATLGKMTYPGLLGID 273
Query: 254 GSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
GS++ A +LI EA + L RAAPL L F+
Sbjct: 274 GSRRKADDLIDEACRLLEPLG-ERAAPLMELARFVT 308
>gi|426411713|ref|YP_007031812.1| geranyltranstransferase [Pseudomonas sp. UW4]
gi|426269930|gb|AFY22007.1| geranyltranstransferase [Pseudomonas sp. UW4]
Length = 295
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 168/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFTAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTSDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|227530530|ref|ZP_03960579.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
gi|227349536|gb|EEJ39827.1| geranyltranstransferase [Lactobacillus vaginalis ATCC 49540]
Length = 290
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 154/266 (57%), Gaps = 18/266 (6%)
Query: 18 EYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGG--S 72
E K LK +QI++ L++ +P + P L +M YS+ GGKRL L + + ++ GG +
Sbjct: 3 ELKELK-EQIDQFLEQQMPSDIDQPT-LASSMEYSVNAGGKRLRPALTLTTVQIFGGQLN 60
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
Q+V M + AIELL T ++I DDLP +DNDDLRRGKP+NHK FG A LA L +A
Sbjct: 61 QNV-MKASTAIELLHTYSLIHDDLPAMDNDDLRRGKPTNHKKFGAGMATLAGDGLLTMAF 119
Query: 133 QHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
Q + + + A G G+ AGQ DI E + ++L +L ++HR KTG
Sbjct: 120 QWLTDNQLPTETQAELTLALAKAAGPAGMVAGQARDIEGEHQNLTLEQLRYLHRQKTGDL 179
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRD 242
+ ++++G II + + +FG G+A+Q+++D++DV+G+ +M + +D
Sbjct: 180 LSYAVLAGGIITKQDSTTKNLLADFGAQFGLAFQIYDDLMDVVGTAKQMGKAVHKDASEH 239
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQ 268
K TYP L+GI G+++ + +AK+
Sbjct: 240 KNTYPGLLGIQGAEEQLHLALKQAKK 265
>gi|89073140|ref|ZP_01159679.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
gi|89051093|gb|EAR56550.1| putative geranyltranstransferase [Photobacterium sp. SKA34]
Length = 300
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 152/275 (55%), Gaps = 21/275 (7%)
Query: 36 PLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
P A+L +AM+Y +L GGKR L + EM+G +Q + A A+E + ++I D
Sbjct: 30 PFADKALL-KAMQYGTLLGGKRARPFLTYVTGEMLGLTQDDLDTPAAAVECIHAYSLIHD 88
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM--------------QHIAIIKA 140
DLP +D+D RRG+P+ H F EA AILA AL LA Q IA++
Sbjct: 89 DLPAMDDDAFRRGQPTCHIAFDEAMAILAGDALQTLAFDILASGQLSQDGNTQRIAMV-- 146
Query: 141 KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
+ A G+ G+ GQ +D+++EGK V L +L IHRHKTG I ++ G + G
Sbjct: 147 SELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGV 206
Query: 201 EI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKH 258
I ++ + + +G+A+Q+ +DI+DVI E K G D+ DK+TYP L+G+DG+++
Sbjct: 207 AILPQLDKYSEAIGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYPALLGLDGAQEK 266
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A++L EA Q LA P + L+ +I+ N
Sbjct: 267 AQQLYQEALQALAAI-PYNTSQLEVFARYIIERNN 300
>gi|398925619|ref|ZP_10661993.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM48]
gi|398171980|gb|EJM59868.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM48]
Length = 295
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTSEAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|404368532|ref|ZP_10973882.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
gi|313687827|gb|EFS24662.1| hypothetical protein FUAG_00177 [Fusobacterium ulcerans ATCC 49185]
Length = 295
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 165/300 (55%), Gaps = 24/300 (8%)
Query: 13 FFQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
FF+ Y K I ++D + L +P ++ E M+Y+ L GGKRL L +++G
Sbjct: 2 FFK--NYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILG 59
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL--- 127
+ ++ A AIE++ + +++ DDLP LDNDD RRGK + HK FGEA IL AL
Sbjct: 60 CEKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTH 119
Query: 128 ----------HCLAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
H A + I I++ + S G G+ GQ++DI SEGK++ L L +IH
Sbjct: 120 AFYILTDKNKHLPAEKVIEIVRLTS--SYAGINGMIGGQMIDIASEGKKIDLETLKYIHS 177
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTG 236
+KTGK ++ + IIG ++EE E + F +G+A+Q+ +DI+D+ G + + G
Sbjct: 178 NKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVG 237
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA-YFDPTRAAPLDHLVNFIVSFGNNN 295
D+ K+TYP L+G+ SK KE IAEAK +A F ++ L L ++I GN N
Sbjct: 238 SDIELGKSTYPALIGMAESKALLKETIAEAKTIVAEKFGVEKSNILLELADYI---GNRN 294
>gi|383318377|ref|YP_005379219.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
gi|379045481|gb|AFC87537.1| geranylgeranyl pyrophosphate synthase [Frateuria aurantia DSM 6220]
Length = 314
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 154/280 (55%), Gaps = 19/280 (6%)
Query: 25 KQINEALDEAVPLPH--PAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
K+++ +LD +P P LH+A+RY+ GGKRL + L AS E +G + ACA
Sbjct: 33 KRLDASLDRWLPAADTDPHRLHQAIRYACRGGKRLRALLVYASGEALGVPLEKLDAPACA 92
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------- 132
+EL+ +++ DDLP +DNDDLRRG+P+ H + ATAIL AL LA
Sbjct: 93 VELIHAYSLVHDDLPGMDNDDLRRGQPTVHIAYDVATAILVGDALQTLAFNLLTDPANAL 152
Query: 133 ---QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
Q +A+I ++ A G G+ GQ +D+ SEG +SL +L +H KTG I S
Sbjct: 153 DARQQVAMI--ASLAHASGPLGMVGGQAVDMESEGASLSLEQLESLHARKTGALIRVSCE 210
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPK 248
I G + + + +G +G+A+Q+ +D++D KT G+D + K+T+P
Sbjct: 211 LAAIAGAASTPVAQALARYGSCLGLAFQIQDDVLDQTADTATLGKTAGKDQAQQKSTFPS 270
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
L+G+D +++ A +L +A+ E+A + APL L +FI
Sbjct: 271 LLGLDTARQRASDLFDQAR-EIAIEISGQPAPLLWLADFI 309
>gi|302879474|ref|YP_003848038.1| polyprenyl synthetase [Gallionella capsiferriformans ES-2]
gi|302582263|gb|ADL56274.1| Polyprenyl synthetase [Gallionella capsiferriformans ES-2]
Length = 297
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 160/290 (55%), Gaps = 20/290 (6%)
Query: 17 NEYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
+ + A + E L +P P P LH+AMRY+ L GGKR+ L A+ E+ G
Sbjct: 7 SAWAAERQAAFEEVLRRVLPQPEVSPQRLHQAMRYAVLEGGKRVRPLLAFAAGELTGADI 66
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM- 132
+ +A ++EL+ +++ DD+PC+D+D LRRGKP+ H + EATA+L +L LA
Sbjct: 67 ARVDIVAASVELIHAYSLVHDDMPCMDDDVLRRGKPTCHVQYDEATALLVGDSLQTLAFQ 126
Query: 133 ------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q +A+I+ + SA GS G+A GQ +D++S GK ++L EL +H HKT
Sbjct: 127 LLTEHRLSDGPQQQMAMIRL--LASASGSRGMAGGQAIDLDSVGKSLTLPELENMHIHKT 184
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G I A+++ G G + ++ + ++ K VG+A+Q+ +D++D KT G+D
Sbjct: 185 GALIRAAVLLGAQCGAVSPVQLACLDHYAKCVGLAFQVVDDVLDAEADTATLGKTAGKDA 244
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
DK TY L+G+ +++ A L EA + LA F A L L +FIV
Sbjct: 245 DNDKPTYVTLLGVTAAREMANNLHREALESLAEFGDA-AQRLRELADFIV 293
>gi|423097572|ref|ZP_17085368.1| geranyltranstransferase [Pseudomonas fluorescens Q2-87]
gi|397885817|gb|EJL02300.1| geranyltranstransferase [Pseudomonas fluorescens Q2-87]
Length = 295
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 164/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N ALD P P + L+EAMRYS + GGKR+ L A+CE +G
Sbjct: 2 IGAYQASSQARVNAALDTLFTAPSPELSRLYEAMRYSVMNGGKRVRPLLAYAACEALGSQ 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 Q------------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
I + + A G G+ GQ +D+ S G ++ S L ++HRHKT
Sbjct: 122 SALLDPALSDCPVQIRLEMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G E+++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVKLGALASGRATPEQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALAVLRPFDAA-AEPLRDLARYIV 291
>gi|373496649|ref|ZP_09587195.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
gi|371965538|gb|EHO83038.1| hypothetical protein HMPREF0402_01068 [Fusobacterium sp. 12_1B]
Length = 295
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 165/300 (55%), Gaps = 24/300 (8%)
Query: 13 FFQVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIG 70
FF+ Y K I ++D + L +P ++ E M+Y+ L GGKRL L +++G
Sbjct: 2 FFK--NYLDSNKKLIESSMDTYLSELNYPEVIAEGMKYAVLNGGKRLRPILLFMILDILG 59
Query: 71 GSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL--- 127
+ ++ A AIE++ + +++ DDLP LDNDD RRGK + HK FGEA IL AL
Sbjct: 60 CEKENGIASAAAIEMIHSYSLVHDDLPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTH 119
Query: 128 ----------HCLAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
H A + I I++ + S G G+ GQ++DI SEGK++ L L +IH
Sbjct: 120 AFYILTDKNKHLPAEKVIEIVRLTS--SYAGINGMIGGQMIDIASEGKKIDLETLKYIHS 177
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTG 236
+KTGK ++ + IIG ++EE E + F +G+A+Q+ +DI+D+ G + + G
Sbjct: 178 NKTGKLMKLPVELACIIGDADKEEKEILVKFADLIGLAFQIKDDILDIEGDFSTLGKPVG 237
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA-YFDPTRAAPLDHLVNFIVSFGNNN 295
D+ K+TYP L+G+ SK KE IAEAK +A F ++ L L ++I GN N
Sbjct: 238 SDIELGKSTYPALIGMVESKALLKETIAEAKTIVAEKFGVEKSNILLELADYI---GNRN 294
>gi|294651287|ref|ZP_06728611.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
gi|292822816|gb|EFF81695.1| geranyltranstransferase [Acinetobacter haemolyticus ATCC 19194]
Length = 303
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/258 (37%), Positives = 151/258 (58%), Gaps = 22/258 (8%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P A +H A+ + GGKR+ LC A+ + + A A+EL+ ++
Sbjct: 31 SIPEPLKAAVHHAV---MLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------------I 137
DDLPC+DND LRRG+P+ H VFGE TA+LA L +A + +A +
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILASRLFDEQGQGTDAAIV 147
Query: 138 IKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGG 196
+K I A S + AGQ++D+ +EGK+V +EL IHR+KTG I+A+I+ G V +
Sbjct: 148 LKQVQI-LATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFA 206
Query: 197 GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGS 255
G + I ++R FG+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ +
Sbjct: 207 GTDPAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQA 266
Query: 256 KKHAKELIAEAKQELAYF 273
K +A+ L +A LAYF
Sbjct: 267 KTYAQTLHDQAFDALAYF 284
>gi|229844084|ref|ZP_04464225.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
gi|229813078|gb|EEP48766.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
6P18H1]
Length = 296
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 158/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM+Y+L GGKR+ L A+ +M+G + +A AIE + ++I DDLP
Sbjct: 29 HNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++++E+
Sbjct: 147 GSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFNTTALRALAEFIIT 293
>gi|374619029|ref|ZP_09691563.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
gi|374302256|gb|EHQ56440.1| geranylgeranyl pyrophosphate synthase [gamma proteobacterium
HIMB55]
Length = 286
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 144/256 (56%), Gaps = 26/256 (10%)
Query: 43 LHEAMRYSLPG-GKRLMSTLCIASCEMI-----------GGSQSVAMSMACAIELLVTMA 90
L +A+ Y+L GK+L S LC + M+ G S A + AIE L T +
Sbjct: 14 LKKALTYALENPGKQLRSRLCKETAAMVESASPSGASVVGNSIESANRVGEAIECLHTYS 73
Query: 91 VIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKA 140
+I DDLP +DNDDLRRGKP+ HK F EATAIL L A + ++ I
Sbjct: 74 LIHDDLPAMDNDDLRRGKPTVHKSFDEATAILVGDGLQAFAFEWVSETEGLSDTQKIQLV 133
Query: 141 KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
K ++ +VG +G+ GQ MDI +EGK + ++ L +H KTG IEAS+++G I G +
Sbjct: 134 KLLSKSVGFDGMVGGQAMDIAAEGKSLDVAALKEVHLRKTGALIEASVLAGAICAGATQN 193
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHA 259
+ + F + +G+A+Q+ +D++DV S E KT G+D+ +K+TY +G+D ++ +A
Sbjct: 194 QTAALHQFSRNIGLAFQVMDDVLDVTASSETLGKTAGKDIAAEKSTYVACMGVDDARAYA 253
Query: 260 KELIAEAKQELAYFDP 275
+L+ EA LA P
Sbjct: 254 NQLLDEA---LALLTP 266
>gi|327398343|ref|YP_004339212.1| farnesyltranstransferase [Hippea maritima DSM 10411]
gi|327180972|gb|AEA33153.1| Farnesyltranstransferase [Hippea maritima DSM 10411]
Length = 291
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 149/264 (56%), Gaps = 21/264 (7%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQ 73
+++ YK L INE A P I EA+ Y+ GGKR+ + L + + +M G +
Sbjct: 4 KLSHYKELVDNFINEL---AQIKRFPPIFQEALFYTPKSGGKRIRAMLVMCAADMFGADE 60
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ ++ +A AIEL+ ++I DDLP +DNDD RRGKP+NHKV+GE A+L L+
Sbjct: 61 TKSLHIASAIELMHAYSLIHDDLPVMDNDDFRRGKPANHKVYGEDLALLVGDGLNTYTFN 120
Query: 134 HIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSE----LNFIHRH 178
IA I+K + N+ +G G+ GQ++D+ S + +NFIH+H
Sbjct: 121 VIADAPIDDARKVKIVKWLSNNAGIG--GMVVGQVVDVLSSRDRLKGHSHKKLVNFIHKH 178
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRD 238
KT K I+AS+V G I G ++ +++R+ +G Y G+A+Q+ +D +DV+G E K D
Sbjct: 179 KTAKLIQASVVCGAICGNPDDVQLDRLAKYGLYAGVAFQIIDDYLDVVGDEEKLGKKKVD 238
Query: 239 MMRDKATYPKLVGIDGSKKHAKEL 262
+ + TYPK+ G+ S A++L
Sbjct: 239 EINNTLTYPKVYGLKRSYDIAQKL 262
>gi|403744977|ref|ZP_10954005.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
gi|403121632|gb|EJY55909.1| Polyprenyl synthetase [Alicyclobacillus hesperidum URH17-3-68]
Length = 291
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 146/241 (60%), Gaps = 13/241 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L+EAM YSL GKRL L +A+ + G + + A A+E++ ++I DDLPC+D+
Sbjct: 29 LYEAMNYSLMADGKRLRPALLMATAQTFGVERQRVLPAAAALEMIHCYSLIHDDLPCMDD 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----HCLAMQHIAIIKAKN-------INSAVGSE 150
D LRRG+P+NH VFGEA A+LA L L + I + A+ + S G++
Sbjct: 89 DSLRRGQPTNHVVFGEAIALLAGDGLLTEAFALLARPIPEVPAERQLRMIQILASRAGAD 148
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ +D+ G + +L+++ FIH HKT + I+A++ G + +E+ E + +G+
Sbjct: 149 GMVGGQAVDVERTGGQGTLTDVQFIHLHKTARLIQAAVEIGSLFPDLDEKAQEALSTYGE 208
Query: 211 YVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
+G+A+Q+ +D++DV+GS E+ + G+D K TYP+ +GI+ +++ A+E IA ++
Sbjct: 209 ALGLAFQMVDDVLDVVGSTSELGKTAGKDEAEGKLTYPRFIGIEETRRLAEETIARGQEA 268
Query: 270 L 270
L
Sbjct: 269 L 269
>gi|69244725|ref|ZP_00602989.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257879355|ref|ZP_05659008.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257881779|ref|ZP_05661432.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257890181|ref|ZP_05669834.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257893509|ref|ZP_05673162.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260558797|ref|ZP_05830986.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|261206507|ref|ZP_05921207.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289565417|ref|ZP_06445866.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|293553173|ref|ZP_06673810.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|293560486|ref|ZP_06676978.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|293568312|ref|ZP_06679636.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|294614724|ref|ZP_06694626.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|294618979|ref|ZP_06698474.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|294621591|ref|ZP_06700756.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|314937883|ref|ZP_07845199.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|314941374|ref|ZP_07848267.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|314950133|ref|ZP_07853419.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|314951326|ref|ZP_07854380.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|314992843|ref|ZP_07858244.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|314998047|ref|ZP_07862935.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|383328074|ref|YP_005353958.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|389867964|ref|YP_006375387.1| geranyltranstransferase [Enterococcus faecium DO]
gi|406580454|ref|ZP_11055647.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|406582711|ref|ZP_11057809.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|406584946|ref|ZP_11059942.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|406590329|ref|ZP_11064698.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410937006|ref|ZP_11368868.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|415898413|ref|ZP_11551298.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|416130948|ref|ZP_11597611.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|424789415|ref|ZP_18216069.1| geranyltranstransferase [Enterococcus faecium V689]
gi|424809990|ref|ZP_18235358.1| geranyltranstransferase [Enterococcus faecium S447]
gi|424826022|ref|ZP_18250963.1| geranyltranstransferase [Enterococcus faecium R501]
gi|424859437|ref|ZP_18283445.1| geranyltranstransferase [Enterococcus faecium R499]
gi|424901173|ref|ZP_18324710.1| geranyltranstransferase [Enterococcus faecium R497]
gi|424951708|ref|ZP_18366776.1| geranyltranstransferase [Enterococcus faecium R496]
gi|424955118|ref|ZP_18369978.1| geranyltranstransferase [Enterococcus faecium R494]
gi|424958642|ref|ZP_18373278.1| geranyltranstransferase [Enterococcus faecium R446]
gi|424959581|ref|ZP_18374159.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|424964082|ref|ZP_18378223.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|424969197|ref|ZP_18382780.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|424971967|ref|ZP_18385364.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|424973311|ref|ZP_18386599.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|424977759|ref|ZP_18390744.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|424982062|ref|ZP_18394745.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|424985835|ref|ZP_18398295.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|424988398|ref|ZP_18400720.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|424990609|ref|ZP_18402815.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|424994745|ref|ZP_18406671.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|424998839|ref|ZP_18410502.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|425001826|ref|ZP_18413311.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|425004788|ref|ZP_18416073.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|425007859|ref|ZP_18418974.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|425009743|ref|ZP_18420737.1| geranyltranstransferase [Enterococcus faecium E422]
gi|425014516|ref|ZP_18425190.1| geranyltranstransferase [Enterococcus faecium E417]
gi|425019176|ref|ZP_18429562.1| geranyltranstransferase [Enterococcus faecium C621]
gi|425019585|ref|ZP_18429933.1| geranyltranstransferase [Enterococcus faecium C497]
gi|425023856|ref|ZP_18433951.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|425031148|ref|ZP_18436291.1| geranyltranstransferase [Enterococcus faecium 515]
gi|425036608|ref|ZP_18441350.1| geranyltranstransferase [Enterococcus faecium 514]
gi|425039735|ref|ZP_18444239.1| geranyltranstransferase [Enterococcus faecium 513]
gi|425043104|ref|ZP_18447373.1| geranyltranstransferase [Enterococcus faecium 511]
gi|425045128|ref|ZP_18449247.1| geranyltranstransferase [Enterococcus faecium 510]
gi|425048694|ref|ZP_18452585.1| geranyltranstransferase [Enterococcus faecium 509]
gi|425052463|ref|ZP_18456068.1| geranyltranstransferase [Enterococcus faecium 506]
gi|425058723|ref|ZP_18462099.1| geranyltranstransferase [Enterococcus faecium 504]
gi|425061084|ref|ZP_18464349.1| geranyltranstransferase [Enterococcus faecium 503]
gi|427395425|ref|ZP_18888347.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430826908|ref|ZP_19445076.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430831521|ref|ZP_19449572.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430833740|ref|ZP_19451751.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430837050|ref|ZP_19455026.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430839128|ref|ZP_19457070.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430844792|ref|ZP_19462689.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430846872|ref|ZP_19464726.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430851060|ref|ZP_19468816.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430856759|ref|ZP_19474443.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430859661|ref|ZP_19477270.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430862413|ref|ZP_19479730.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430963191|ref|ZP_19487483.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|431011109|ref|ZP_19489853.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|431185971|ref|ZP_19500034.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|431237102|ref|ZP_19503245.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|431264037|ref|ZP_19505925.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|431290521|ref|ZP_19506656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|431382781|ref|ZP_19511374.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|431523789|ref|ZP_19516814.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|431536430|ref|ZP_19517390.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|431677783|ref|ZP_19524381.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|431747892|ref|ZP_19536656.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|431754081|ref|ZP_19542746.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|431765964|ref|ZP_19554463.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|431768767|ref|ZP_19557200.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|431770059|ref|ZP_19558462.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|431774413|ref|ZP_19562721.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|431777032|ref|ZP_19565289.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|431779298|ref|ZP_19567493.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|431781339|ref|ZP_19569487.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|431784970|ref|ZP_19573005.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|447913372|ref|YP_007394784.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
gi|68196316|gb|EAN10745.1| Polyprenyl synthetase [Enterococcus faecium DO]
gi|257813583|gb|EEV42341.1| polyprenyl synthetase [Enterococcus faecium 1,230,933]
gi|257817437|gb|EEV44765.1| polyprenyl synthetase [Enterococcus faecium 1,231,502]
gi|257826541|gb|EEV53167.1| polyprenyl synthetase [Enterococcus faecium 1,231,410]
gi|257829888|gb|EEV56495.1| polyprenyl synthetase [Enterococcus faecium 1,231,408]
gi|260075256|gb|EEW63569.1| polyprenyl synthetase [Enterococcus faecium C68]
gi|260079217|gb|EEW66908.1| polyprenyl synthetase [Enterococcus faecium TC 6]
gi|289162746|gb|EFD10597.1| polyprenyl synthetase [Enterococcus faecium D344SRF]
gi|291589024|gb|EFF20848.1| geranyltranstransferase [Enterococcus faecium E1071]
gi|291592462|gb|EFF24069.1| geranyltranstransferase [Enterococcus faecium E1636]
gi|291594640|gb|EFF26022.1| geranyltranstransferase [Enterococcus faecium E1679]
gi|291598756|gb|EFF29808.1| geranyltranstransferase [Enterococcus faecium U0317]
gi|291602583|gb|EFF32798.1| geranyltranstransferase [Enterococcus faecium E1039]
gi|291605634|gb|EFF35076.1| geranyltranstransferase [Enterococcus faecium E1162]
gi|313587889|gb|EFR66734.1| geranyltranstransferase [Enterococcus faecium TX0133a01]
gi|313592647|gb|EFR71492.1| geranyltranstransferase [Enterococcus faecium TX0133B]
gi|313596543|gb|EFR75388.1| geranyltranstransferase [Enterococcus faecium TX0133A]
gi|313599797|gb|EFR78640.1| geranyltranstransferase [Enterococcus faecium TX0133C]
gi|313642741|gb|EFS07321.1| geranyltranstransferase [Enterococcus faecium TX0133a04]
gi|313643574|gb|EFS08154.1| geranyltranstransferase [Enterococcus faecium TX0082]
gi|364090081|gb|EHM32712.1| geranyltranstransferase [Enterococcus faecium E4453]
gi|364093823|gb|EHM36059.1| geranyltranstransferase [Enterococcus faecium E4452]
gi|378937768|gb|AFC62840.1| geranyltranstransferase [Enterococcus faecium Aus0004]
gi|388533213|gb|AFK58405.1| geranyltranstransferase [Enterococcus faecium DO]
gi|402918223|gb|EJX38937.1| geranyltranstransferase [Enterococcus faecium S447]
gi|402922095|gb|EJX42500.1| geranyltranstransferase [Enterococcus faecium V689]
gi|402924691|gb|EJX44883.1| geranyltranstransferase [Enterococcus faecium R501]
gi|402926469|gb|EJX46505.1| geranyltranstransferase [Enterococcus faecium R499]
gi|402928929|gb|EJX48735.1| geranyltranstransferase [Enterococcus faecium R496]
gi|402931342|gb|EJX50928.1| geranyltranstransferase [Enterococcus faecium R497]
gi|402935005|gb|EJX54298.1| geranyltranstransferase [Enterococcus faecium R494]
gi|402939539|gb|EJX58444.1| geranyltranstransferase [Enterococcus faecium R446]
gi|402947496|gb|EJX65704.1| geranyltranstransferase [Enterococcus faecium P1190]
gi|402949153|gb|EJX67234.1| geranyltranstransferase [Enterococcus faecium P1140]
gi|402950095|gb|EJX68110.1| geranyltranstransferase [Enterococcus faecium P1986]
gi|402956906|gb|EJX74329.1| geranyltranstransferase [Enterococcus faecium P1139]
gi|402958947|gb|EJX76228.1| geranyltranstransferase [Enterococcus faecium P1137]
gi|402961818|gb|EJX78813.1| geranyltranstransferase [Enterococcus faecium ERV99]
gi|402964501|gb|EJX81275.1| geranyltranstransferase [Enterococcus faecium P1123]
gi|402965086|gb|EJX81824.1| geranyltranstransferase [Enterococcus faecium ERV69]
gi|402972097|gb|EJX88322.1| geranyltranstransferase [Enterococcus faecium ERV38]
gi|402979097|gb|EJX94784.1| geranyltranstransferase [Enterococcus faecium ERV26]
gi|402979195|gb|EJX94875.1| geranyltranstransferase [Enterococcus faecium ERV168]
gi|402981876|gb|EJX97383.1| geranyltranstransferase [Enterococcus faecium ERV165]
gi|402985310|gb|EJY00530.1| geranyltranstransferase [Enterococcus faecium ERV161]
gi|402988433|gb|EJY03440.1| geranyltranstransferase [Enterococcus faecium ERV102]
gi|402994284|gb|EJY08827.1| geranyltranstransferase [Enterococcus faecium ERV1]
gi|402998583|gb|EJY12832.1| geranyltranstransferase [Enterococcus faecium E417]
gi|402999221|gb|EJY13423.1| geranyltranstransferase [Enterococcus faecium C621]
gi|403001997|gb|EJY16010.1| geranyltranstransferase [Enterococcus faecium E422]
gi|403008464|gb|EJY21968.1| geranyltranstransferase [Enterococcus faecium C1904]
gi|403011136|gb|EJY24465.1| geranyltranstransferase [Enterococcus faecium C497]
gi|403014149|gb|EJY27167.1| geranyltranstransferase [Enterococcus faecium 514]
gi|403014721|gb|EJY27691.1| geranyltranstransferase [Enterococcus faecium 513]
gi|403016317|gb|EJY29141.1| geranyltranstransferase [Enterococcus faecium 515]
gi|403021343|gb|EJY33810.1| geranyltranstransferase [Enterococcus faecium 511]
gi|403027866|gb|EJY39722.1| geranyltranstransferase [Enterococcus faecium 510]
gi|403030009|gb|EJY41729.1| geranyltranstransferase [Enterococcus faecium 509]
gi|403034255|gb|EJY45718.1| geranyltranstransferase [Enterococcus faecium 506]
gi|403037578|gb|EJY48843.1| geranyltranstransferase [Enterococcus faecium 504]
gi|403042021|gb|EJY52997.1| geranyltranstransferase [Enterococcus faecium 503]
gi|404453831|gb|EKA00863.1| geranyltranstransferase [Enterococcus sp. GMD4E]
gi|404457701|gb|EKA04231.1| geranyltranstransferase [Enterococcus sp. GMD3E]
gi|404463165|gb|EKA08861.1| geranyltranstransferase [Enterococcus sp. GMD2E]
gi|404469398|gb|EKA14204.1| geranyltranstransferase [Enterococcus sp. GMD1E]
gi|410734599|gb|EKQ76518.1| geranyltranstransferase [Enterococcus sp. GMD5E]
gi|425723925|gb|EKU86811.1| hypothetical protein HMPREF9307_00523 [Enterococcus durans
FB129-CNAB-4]
gi|430444454|gb|ELA54292.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0164]
gi|430481404|gb|ELA58560.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0333]
gi|430486145|gb|ELA63013.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0679]
gi|430487831|gb|ELA64539.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0680]
gi|430491125|gb|ELA67607.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E0688]
gi|430496223|gb|ELA72328.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1050]
gi|430534817|gb|ELA75252.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1185]
gi|430538426|gb|ELA78718.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1133]
gi|430543198|gb|ELA83273.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1552]
gi|430543872|gb|ELA83924.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1392]
gi|430548991|gb|ELA88838.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1573]
gi|430555616|gb|ELA95153.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1576]
gi|430560131|gb|ELA99437.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1578]
gi|430572666|gb|ELB11516.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1622]
gi|430572956|gb|ELB11791.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1620]
gi|430576473|gb|ELB15124.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1623]
gi|430581152|gb|ELB19599.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1627]
gi|430582621|gb|ELB21043.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1626]
gi|430584747|gb|ELB23061.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1634]
gi|430594917|gb|ELB32869.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1731]
gi|430599276|gb|ELB36987.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1904]
gi|430614768|gb|ELB51739.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2297]
gi|430620004|gb|ELB56807.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2883]
gi|430627407|gb|ELB63909.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4215]
gi|430628635|gb|ELB65069.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1321]
gi|430634162|gb|ELB70297.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2369]
gi|430635812|gb|ELB71891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1644]
gi|430639973|gb|ELB75827.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2560]
gi|430642153|gb|ELB77934.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E4389]
gi|430648526|gb|ELB83932.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6045]
gi|430649700|gb|ELB85068.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E6012]
gi|445189081|gb|AGE30723.1| Octaprenyl-diphosphate synthase, Dimethylallyltransferase,
Geranyltranstransferase [Enterococcus faecium NRRL
B-2354]
Length = 296
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L++AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LYDAMSYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGHLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++ A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|384462224|ref|YP_005674819.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
gi|295319241|gb|ADF99618.1| geranyltranstransferase [Clostridium botulinum F str. 230613]
Length = 290
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 135/223 (60%), Gaps = 12/223 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + AM +A AIE++ T ++I DDLP +DN
Sbjct: 29 IYEAMAYSLEAGGKRIRPVLFLNTYSLYKEDYKKAMPIAAAIEMIHTYSLIHDDLPAMDN 88
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN----------INSAVGSEG 151
DDLRRGKP+NHK+FGEA AILA AL AM + KN I A G +G
Sbjct: 89 DDLRRGKPTNHKIFGEAIAILAGDALLNEAMNIMFEYSLKNGEKALKACYTIAKAAGVDG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SE K +SL EL ++ + K G I+ASI++G I+G +IE + +G
Sbjct: 149 MIGGQVVDILSEDKSISLDELYYMQQKKAGALIKASILAGAILGSATYTDIELLGEYGDN 208
Query: 212 VGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGID 253
+G+A+Q+ +DI+DV G + + +KT D K T+ K+ GI+
Sbjct: 209 LGLAFQIKDDILDVEGDTTTLGKKTKSDEDNHKTTFVKVYGIE 251
>gi|90579835|ref|ZP_01235643.1| putative geranyltranstransferase [Photobacterium angustum S14]
gi|90438720|gb|EAS63903.1| putative geranyltranstransferase [Photobacterium angustum S14]
Length = 300
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 152/275 (55%), Gaps = 21/275 (7%)
Query: 36 PLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
P A+L +AM+Y +L GGKR L + EM+G +Q + A A+E + ++I D
Sbjct: 30 PFADKALL-KAMQYGTLLGGKRARPFLTYVTGEMLGVTQDDLDTPAAAVECIHAYSLIHD 88
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM--------------QHIAIIKA 140
DLP +D+D LRRG+P+ H F EA AILA AL LA Q IA++
Sbjct: 89 DLPAMDDDALRRGQPTCHIAFDEAIAILAGDALQTLAFDILANGQLSQDGNTQRIAMV-- 146
Query: 141 KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
+ A G+ G+ GQ +D+++EGK V L +L IHRHKTG I ++ G + G
Sbjct: 147 SELAKASGAAGMCLGQALDLDAEGKHVGLEQLELIHRHKTGALIRCAVRLGALAAGDKGV 206
Query: 201 EI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKH 258
I ++ + + +G+A+Q+ +DI+DVI E K G D+ DK+TYP L+G+DG+++
Sbjct: 207 AILPQLDKYAEAIGLAFQVQDDILDVISDTETLGKPQGSDLALDKSTYPALLGLDGAQEK 266
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A+ L EA Q LA P + L+ +I+ N
Sbjct: 267 AQLLYQEALQALAAI-PYNTSQLEVFARYIIERNN 300
>gi|363890208|ref|ZP_09317549.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
gi|361965889|gb|EHL18851.1| hypothetical protein HMPREF9628_01991 [Eubacteriaceae bacterium
CM5]
Length = 295
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 148/250 (59%), Gaps = 13/250 (5%)
Query: 35 VPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQ 93
+ L + + + ++MRYSL GGKR+ + + + + +AC IE++ T ++I
Sbjct: 24 IDLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLIH 83
Query: 94 DDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKA-KN 142
DDLP +DND LRRGKP+NH V+G+A AILA AL A + I +KA +
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
I++ G G+ GQ+ DI +E K++S+ L +IH +KT K I AS+VS + +E ++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISVDNLEYIHENKTAKLIIASMVSAGYLANADETDM 203
Query: 203 ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKE 261
E +R + +GMA+Q+ +DI+D+IG+ ++ K+ G+D+ K TYPK GI+ SK+
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNV 263
Query: 262 LIAEAKQELA 271
+ A E++
Sbjct: 264 YVNSAIDEIS 273
>gi|417842708|ref|ZP_12488789.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
gi|341951267|gb|EGT77844.1| Farnesyl diphosphate synthase [Haemophilus haemolyticus M21127]
Length = 296
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 154/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM+Y+L GGKR+ L A+ +M+G + A AIE + ++I DDLP
Sbjct: 29 HNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYSAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI+S
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--MLTKTPNISSEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIE 203
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +
Sbjct: 147 GAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFADKRLEQ 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFDTTALRALAEFIIT 293
>gi|398891056|ref|ZP_10644496.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM55]
gi|398187291|gb|EJM74635.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM55]
Length = 295
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/291 (38%), Positives = 167/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSASDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQAYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|225849919|ref|YP_002730153.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
gi|225646113|gb|ACO04299.1| geranyltranstransferase (Farnesyl-diphosphate synthase)
[Persephonella marina EX-H1]
Length = 290
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 163/288 (56%), Gaps = 16/288 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ- 73
V + A ++ INE + P P L +AM YSL GGKRL L + S + +G
Sbjct: 3 VKHFLAKQSVFINEQIKRLTPSGIPEKLFDAMAYSLSAGGKRLRPILVLESAKAVGMEDI 62
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ +A A E + T ++I DDLP +D+D+LRRGKP+ H V+GEA AILA L A +
Sbjct: 63 KDIVDIAVATEFIHTYSLIHDDLPAMDDDELRRGKPTCHIVYGEAIAILAGDGLQSYAFE 122
Query: 134 HIA---------IIKAKNINS-AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
I+ ++K NI S G G+ GQ DI E KE S +++NFIH HKT KF
Sbjct: 123 LISKNRTVPPDKLLKVINILSHGTGIYGMVGGQAADILHE-KENSFNDINFIHTHKTAKF 181
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRD 242
I++ G ++ EEE ++N+G Y+G+A+Q+ +DI+D IG ++ +KT +D ++
Sbjct: 182 IQSCCQMGGVLADATEEEEISLKNYGLYIGLAFQIQDDILDEIGDEKKLGKKTKKDRDKN 241
Query: 243 KATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
K TYP + GI+ SK+ A+E + +A E+ R L + FI++
Sbjct: 242 KLTYPSIYGIEESKRIAREYVEKAVSEVEKL--KRPEILIEIAKFIIN 287
>gi|330812001|ref|YP_004356463.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699564|ref|ZP_17674054.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
gi|327380109|gb|AEA71459.1| geranyltranstransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996521|gb|EIK57851.1| geranyltranstransferase [Pseudomonas fluorescens Q8r1-96]
Length = 295
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ + P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IGAYQASSQARVNAALETLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQ 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A ++ ++ A G G+ GQ +D+ S G ++ S L ++HRHKT
Sbjct: 122 TALLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGLKLDQSALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G +++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAA-AEPLRDLARYIV 291
>gi|407368405|ref|ZP_11114937.1| farnesyl-diphosphate synthase [Pseudomonas mandelii JR-1]
Length = 300
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 165/296 (55%), Gaps = 23/296 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSE-----------------GIAAGQIMDINSEGKEVSLSELNFI 175
+ + ++A+ S+ G+ GQ +D+ S G ++ L +
Sbjct: 122 SALLDPRLSTSDAALTSDHLRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALETM 181
Query: 176 HRHKTGKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MRE 233
HRHKTG IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + +
Sbjct: 182 HRHKTGALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGK 241
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ G D+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 RQGADIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 296
>gi|417853151|ref|ZP_12498573.1| hypothetical protein GEW_03277 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338215434|gb|EGP01711.1| hypothetical protein GEW_03277 [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 295
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 155/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+P+ L EAMRY L GGKR+ L A+ M+G + A ++E + ++I DDLP
Sbjct: 28 NPSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLP 87
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINS 145
+D+D LRRG+P+ H F ATAILA AL A Q +A++ + ++
Sbjct: 88 AMDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLALV--QTLSQ 145
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIE 203
A G +G+ GQ +D+ SE K +SL EL IHR+KTG + A+I G I N+ +
Sbjct: 146 AAGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQ 205
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKEL 262
++R + + +G+A+Q+ +DI+D+ G ++ KT G D++ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 206 QLRRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKLLGLAGAKQKAQEL 265
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P + L + F+V+
Sbjct: 266 YQSAIAELESI-PFDTSALRAIAEFVVN 292
>gi|398886802|ref|ZP_10641656.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM60]
gi|398187957|gb|EJM75280.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM60]
Length = 295
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 164/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + ++ + + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTSDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|219870895|ref|YP_002475270.1| geranyltranstransferase [Haemophilus parasuis SH0165]
gi|219691099|gb|ACL32322.1| geranyltranstransferase [Haemophilus parasuis SH0165]
Length = 297
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 171/298 (57%), Gaps = 23/298 (7%)
Query: 13 FFQVNEYKALKAKQINEALDEAVPLPHPAI---LHEAMRYS-LPGGKRLMSTLCIASCEM 68
F ++++Y+ ++IN L E + +PA L +AM Y+ L GGKR+ L A+ +M
Sbjct: 6 FAELSQYQ----QRINHFLSEQLS-QYPAYNTPLIDAMSYAVLLGGKRVRPFLIYATGKM 60
Query: 69 IGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+G + A A+E + +++ DDLP +DND LRRGKP+ H F EATAILA AL
Sbjct: 61 LGVPLAQLDHSAGAMEAIHAYSLVHDDLPAMDNDTLRRGKPTCHIAFDEATAILAGDALQ 120
Query: 129 CLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
A + +A + + + + + G++G+ GQ +D+ SE K ++L EL IHR+
Sbjct: 121 SFAFELLAFDPSLTAEQKVAQMQWLAKSAGAKGMCLGQSLDLQSEHKAIALDELERIHRN 180
Query: 179 KTGKFIEASIVSGVIIGG-GNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT- 235
KTG I AS++ G + + +I +++ + + +G+A+Q+ +DI+DVIG+ E+ KT
Sbjct: 181 KTGALILASVMMGFNLSAYAQDHQIKQQLVQYAEAIGLAFQVQDDILDVIGNSEVIGKTA 240
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
G D DK+TYPKL+G++G+K+ A+ L A + L P L L FIV N
Sbjct: 241 GSDQALDKSTYPKLLGLEGAKQKAESLYQTALKALETL-PFDTTALAALAEFIVKREN 297
>gi|238926867|ref|ZP_04658627.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
gi|238885399|gb|EEQ49037.1| Farnesyltranstransferase [Selenomonas flueggei ATCC 43531]
Length = 291
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 155/261 (59%), Gaps = 17/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM YSL GGKRL L +A+ + +G + +S+ACA+E++ T ++I DDLP +DN
Sbjct: 30 LRQAMAYSLMAGGKRLRPVLLMAAADAVGADGAKFLSVACALEMIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------AVGS 149
DD RRGK +NHKVFG+ AILA L LA I++ +N+++ A G+
Sbjct: 90 DDYRRGKLTNHKVFGDGIAILAGDGLLTLAF--TVILRQQNVSADTLLRVVDEISRAAGA 147
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E +S+ E+ +H KTG A++ SG I+GG +E ++ + +
Sbjct: 148 EGMVGGQVLDLRAEEHRISMEEMRRVHMGKTGALFRAALRSGAILGGASEAQLAALTTYA 207
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DVIG+ E + + G D K+TY L +D +++ A + + +A
Sbjct: 208 EQFGLAFQITDDILDVIGTAENIGKPVGSDEKNHKSTYVSLTSLDEAQELAAQTVKDACT 267
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L F A L LV+++V
Sbjct: 268 ALRDF-GVEADFLRELVSYLV 287
>gi|384044955|ref|YP_005492972.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
gi|345442646|gb|AEN87663.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus megaterium WSH-002]
Length = 298
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 152/257 (59%), Gaps = 15/257 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLPH-PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ 73
+ EY + ++ L E V H P L E+M YSL GGKRL L A+ G +
Sbjct: 7 LKEYISFTKDRVETRLPEVVKALHAPVNLKESMLYSLTAGGKRLRPVLLFATLHAFGKDE 66
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
S+ + ACA+E++ T ++I DDLP +D+DDLRRGKP+NHKV+GEATAILA AL + Q
Sbjct: 67 SMGLETACAVEMIHTYSLIHDDLPSMDDDDLRRGKPTNHKVYGEATAILAGDALLTNSFQ 126
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
I+ I S A G+EG+ +GQ+ D+ E K+++L EL +IH HKTG
Sbjct: 127 LISEAAHPEITSHMKLQLITELVKASGTEGMISGQVADMEGEKKQLTLDELEYIHLHKTG 186
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
K + + +G I+ + + + F K+VG+A+Q+ +DI+DV GS E + + G D
Sbjct: 187 KLLGFCVKAGAILAKATPLQQKLLEEFSKHVGLAFQIQDDILDVEGSEEKLGKPIGSDTE 246
Query: 241 RDKATYPKLVGIDGSKK 257
+K TYP L+G++ +K+
Sbjct: 247 NEKTTYPSLLGMEAAKE 263
>gi|269103247|ref|ZP_06155944.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163145|gb|EEZ41641.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 299
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 166/302 (54%), Gaps = 20/302 (6%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRY-SLPGGKRLMSTLCIAS 65
N +L + Q Y+ +Q+ LD A P +L +AM+Y +L GGKR+ L +
Sbjct: 3 NSSLLQLLQ--HYQERNNQQLTHWLD-AQPFADQTLL-KAMKYGALLGGKRVRPFLTYVT 58
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
M+G ++ + A AIE + ++I DDLP +D+D+LRRG+P+ H F EATA+LA
Sbjct: 59 GNMLGVNEENLDTPAAAIECIHAYSLIHDDLPAMDDDELRRGQPTCHIAFDEATAVLAGD 118
Query: 126 ALHCLAMQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELN 173
AL LA + +A I K + A G+ G+ GQ +D++ EGK + L++L
Sbjct: 119 ALQTLAFEILAEGTLSIDGESQRIKMIKELAQASGAAGMCMGQALDLDGEGKHLGLTQLE 178
Query: 174 FIHRHKTGKFIEASIVSGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMR 232
IH+HKTG I ++ G + G EI ++ + + +G+A+Q+ +DI+DVI E
Sbjct: 179 QIHKHKTGALIRCAVRLGALAAGEKGLEILPQLNTYAEAIGLAFQVQDDILDVISDTETL 238
Query: 233 EK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSF 291
K G D+ DK+TYP L+G++G+++ A++L EA Q L P L+ +++
Sbjct: 239 GKPQGSDIALDKSTYPALLGLEGAQQKAQQLYQEAVQALEAI-PYDTTQLEVFARYLIER 297
Query: 292 GN 293
N
Sbjct: 298 KN 299
>gi|406878658|gb|EKD27503.1| hypothetical protein ACD_79C00693G0001, partial [uncultured
bacterium]
Length = 246
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 12/239 (5%)
Query: 61 LCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATA 120
LC+ S E+ ++ ACA+ELL T +I DDLPC+DNDD RRGKP+ HK F E+ A
Sbjct: 4 LCLLSAELFAEPSQNVINCACALELLHTYTLIHDDLPCMDNDDFRRGKPTCHKAFPESIA 63
Query: 121 ILACQALHCLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLS 170
+LA AL L Q IA I ++ GS+G+ GQ++DI +E K ++
Sbjct: 64 LLAGDALLTLCFQIIADNTKNCPEKGIRIISDLAELTGSKGVIGGQVLDIINENKPITPE 123
Query: 171 ELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SP 229
EL+ IH +KT K I AS+ G I+ E E+E + +G +G A+Q+ +DI+D IG S
Sbjct: 124 ELSEIHINKTAKLISASVRMGAILMNAAESELEMITKYGLLIGEAFQIADDILDEIGDSA 183
Query: 230 EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
++ + TG+D+ +K+T+PK GID SK+ + I A L F +A L+ + +FI
Sbjct: 184 KLGKNTGQDLKLNKSTFPKFFGIDKSKQILFDKINSAVACLNQFG-KKAESLNQIAHFI 241
>gi|145638945|ref|ZP_01794553.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|145271917|gb|EDK11826.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittII]
gi|309750914|gb|ADO80898.1| Geranyltranstransferase [Haemophilus influenzae R2866]
Length = 296
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 157/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM+Y+L GGKR+ L A+ +M+G + +A AIE + ++I DDLP
Sbjct: 29 HNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +E+
Sbjct: 147 GSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFDTTALRALAEFIIT 293
>gi|37679053|ref|NP_933662.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
gi|37197795|dbj|BAC93633.1| geranylgeranyl pyrophosphate synthase [Vibrio vulnificus YJ016]
Length = 298
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 162/304 (53%), Gaps = 30/304 (9%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHP-AILHEAMRYSLP-GGKRLMSTLCIAS 65
D L F Q N +Q+N LD+ LPH L +AMRY L GGKR L A+
Sbjct: 7 DVLASFQQRNN------QQLNLWLDK---LPHQNQALIQAMRYGLVLGGKRARPFLVYAT 57
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
EM+G SQ + A AIE + ++I DDLP +D+D+LRRG+P+ H F EATAIL
Sbjct: 58 GEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGD 117
Query: 126 ALHCLAM--------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSE 171
AL LA Q +A+I+A + A G++G+ GQ +D+ +E + V+L E
Sbjct: 118 ALQTLAFTILAEGTLSPDGETQRVAMIQA--LAQASGAQGMCIGQALDLAAENRAVTLEE 175
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPE 230
L IHR+KTG I ++ G + G I ++ F +G+A+Q+ +DI+D+I E
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKFSTAIGLAFQVQDDILDIISDTE 235
Query: 231 MREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K G D +K+TYP L+G++G+ + A L+ EA Q L P L+ ++V
Sbjct: 236 TLGKPQGSDQELNKSTYPSLLGLEGAMEKAHTLLHEALQALEAI-PYNTQHLEEFARYVV 294
Query: 290 SFGN 293
N
Sbjct: 295 ERKN 298
>gi|365925007|ref|ZP_09447770.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus mali KCTC 3596
= DSM 20444]
gi|420266284|ref|ZP_14768766.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus mali KCTC 3596
= DSM 20444]
gi|394425780|gb|EJE98697.1| Geranylgeranyl pyrophosphate synthase [Lactobacillus mali KCTC 3596
= DSM 20444]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 25/294 (8%)
Query: 6 RNDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIA 64
++ LPKF K+I E L+ L L +AM YS+ GGKR+ + +A
Sbjct: 9 QSTNLPKF----------EKKIAEFLNN---LSAETTLKDAMAYSVEIGGKRIRPLMIMA 55
Query: 65 SCEMIGGS-QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA 123
C S +++A ++E L T ++I DDLP +DNDDLRRGK +NHKVFG+A A+LA
Sbjct: 56 ICSFYNRSIDDDVLAVAGSLEFLHTYSLIHDDLPEMDNDDLRRGKATNHKVFGQAEAVLA 115
Query: 124 CQALHCLAMQHIAII----KAK-----NINSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
L LA +A K+K + A G EG+ +GQI DI E K ++L +L
Sbjct: 116 GDGLLTLAFDWVARTGLDSKSKVDLIAALAKAAGPEGMVSGQIADIEGEHKTLNLEQLKK 175
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMRE 233
+H KTG + + +G I+ +EE+E + NFG G+A+Q+++DI+DV+ + EM +
Sbjct: 176 VHERKTGALLRYACQAGGILCKTEKEELELLVNFGASFGLAFQIYDDILDVVSTTKEMGK 235
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNF 287
+D +K TYP ++G+DG+ + ++ I EA+ L + + D L F
Sbjct: 236 AVHKDKGENKNTYPVILGLDGAYQRLEQAIEEAEGALVKLNASDCVLADFLEYF 289
>gi|148826941|ref|YP_001291694.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
gi|148718183|gb|ABQ99310.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
PittGG]
Length = 296
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 157/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L AM+Y+L GGKR+ L A+ +M+G + +A AIE + ++I DDLP
Sbjct: 29 HNAPLLNAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYVAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++++E+
Sbjct: 147 GSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFNTTALRALAEFIIT 293
>gi|257899149|ref|ZP_05678802.1| polyprenyl synthetase [Enterococcus faecium Com15]
gi|257837061|gb|EEV62135.1| polyprenyl synthetase [Enterococcus faecium Com15]
Length = 296
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 141/225 (62%), Gaps = 12/225 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L +A+ V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGS 255
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKT 255
>gi|217970189|ref|YP_002355423.1| polyprenyl synthetase [Thauera sp. MZ1T]
gi|217507516|gb|ACK54527.1| Polyprenyl synthetase [Thauera sp. MZ1T]
Length = 302
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 24/301 (7%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVPLPHPAI----LHEAMRYS-LPGGKRLMSTL 61
+ LP F +E+ A ++ AL A LP AI LHEAMRY+ L GGKR+ L
Sbjct: 4 DSKLPSF---SEWTAQIQQRTEVAL--AGVLPDAAIAPHRLHEAMRYAVLGGGKRVRPLL 58
Query: 62 CIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAI 121
A+ + G + +ACA+EL+ +++ DDLPC+D+D LRRGKP+ H F EATA+
Sbjct: 59 AHAAGALAGAAAEDLDRIACAVELIHAYSLVHDDLPCMDDDVLRRGKPTVHVEFDEATAL 118
Query: 122 LACQALHCLAMQHIA-----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLS 170
LA AL LA Q +A + + A GS G+A GQ +D+ S GK +
Sbjct: 119 LAGDALQTLAFQVLAERPLGTDPANQLAMLNQLAIASGSRGMAGGQAIDLASVGKRLGRE 178
Query: 171 ELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP 229
EL F+H HKTG I A+++ G GG +E R+ ++ K VG+ +Q+ +D++D
Sbjct: 179 ELEFMHIHKTGALIRAAVLLGARAGGTLGADEHARLDHYAKVVGLLFQVVDDLLDAEADT 238
Query: 230 EMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFI 288
KT G+D DK TY L+G+ +++ A+E++ EA+ L F RA L+ L ++I
Sbjct: 239 ATLGKTAGKDADNDKPTYVSLLGLVDARRLAEEMLDEARASLRPFG-ARALRLEQLADYI 297
Query: 289 V 289
V
Sbjct: 298 V 298
>gi|328952416|ref|YP_004369750.1| farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
gi|328452740|gb|AEB08569.1| Farnesyltranstransferase [Desulfobacca acetoxidans DSM 11109]
Length = 296
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 156/260 (60%), Gaps = 16/260 (6%)
Query: 45 EAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDD 103
EAMRYSL GGKRL LC+A+ E + G+ M +A A+E++ T ++I DDLP +D+DD
Sbjct: 34 EAMRYSLLAGGKRLRPILCLAAAEAVAGNVEQVMPVAGALEMIHTYSLIHDDLPAMDDDD 93
Query: 104 LRRGKPSNHKVFGEATAILACQALHCL-------------AMQHIAIIKAKNINSAVGSE 150
RRG+P+ HK F EATAILA L A + + I A G +
Sbjct: 94 FRRGRPTCHKKFDEATAILAGDGLLTAAFEVLAAAATNHPAQASVYHEVVQTIARAAGYQ 153
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ+ D+ +EG+ +L ++ IHR KTG + AS+ SG ++GGG+ +I + ++G+
Sbjct: 154 GMVGGQMADLLAEGQPSTLEQVEAIHRLKTGALLTASVRSGALLGGGSARDILALTHYGE 213
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
G+ +Q+ +D++DV G S EM + TG D +R KATYP ++G+ +K A++L+A A +
Sbjct: 214 KFGLIFQITDDLLDVEGESAEMGKPTGMDAIRQKATYPAVMGVAAAKNQARDLVAAALVD 273
Query: 270 LAYFDPTRAAPLDHLVNFIV 289
L F RA PL L +++
Sbjct: 274 LQPFG-ERAEPLRQLARYLL 292
>gi|254282519|ref|ZP_04957487.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
gi|219678722|gb|EED35071.1| geranyltranstransferase [gamma proteobacterium NOR51-B]
Length = 279
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 147/254 (57%), Gaps = 15/254 (5%)
Query: 34 AVPLPHPAILHEAMRYSLPG-GKRLMSTLCIASCEMIGGSQ--SVAMSMACAIELLVTMA 90
++P P P L A Y L GK+L + L + M+G + ++A AIELL + +
Sbjct: 8 SIPCPDPQ-LAAAAEYVLANPGKQLRAKLVRETAAMLGSADPNCGVETVATAIELLHSYS 66
Query: 91 VIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---IIKAKN----- 142
++ DDLP +DNDDLRRG+P+ H+ F EATAIL A + IA + A+
Sbjct: 67 LVHDDLPAMDNDDLRRGRPTVHRAFDEATAILVGDGFQARAFEIIARDSSLSAEQRVELF 126
Query: 143 --INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
++ AVG EG+ GQ +D+ +E ++ ++EL +HR KTG I+A++V G I+ G N E
Sbjct: 127 ALLSQAVGFEGMVGGQALDMAAEHQQCGIAELTRLHRLKTGALIQAAVVGGAIVAGANRE 186
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHA 259
++R+ F +G+A+Q+ +D++DV S ++ + G+D + K+TY +GIDG+K A
Sbjct: 187 TLDRLATFAMNLGLAFQVIDDVLDVTACSDDLGKTAGKDAISGKSTYVTCLGIDGAKAEA 246
Query: 260 KELIAEAKQELAYF 273
L+ EA L F
Sbjct: 247 ARLLNEAVDALEPF 260
>gi|227499080|ref|ZP_03929217.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|352684487|ref|YP_004896472.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
gi|226904529|gb|EEH90447.1| polyprenyl synthetase [Acidaminococcus sp. D21]
gi|350279142|gb|AEQ22332.1| polyprenyl synthetase [Acidaminococcus intestini RyC-MR95]
Length = 292
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/260 (37%), Positives = 151/260 (58%), Gaps = 21/260 (8%)
Query: 45 EAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDD 103
EAM YS L GGKRL L +A+ + +GG + + +A A+E++ T ++I DDLP +DNDD
Sbjct: 33 EAMAYSALAGGKRLRPILLMAAADAVGGKGTDFLPLASALEMIHTYSLIHDDLPEMDNDD 92
Query: 104 LRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV------------GSEG 151
RRG+ +NHKVFG+A A+LA L A + + + K ++ A+ G EG
Sbjct: 93 YRRGRLTNHKVFGQAMAVLAGDGLLTQAFE--VMTEQKGVDPALMVEIIHLIARCAGPEG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ +DIN+E K + +E+ +H KTG A+I SG ++GGG+++E+ + F +
Sbjct: 151 MVGGQALDINAEEKHLEPAEMKQLHEAKTGALFIAAIRSGALLGGGSKDEVNALTKFATF 210
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+ +DI+DV G + M + G D K+TY L ++G+K A + + +A+ L
Sbjct: 211 FGLAFQITDDILDVEGDSKIMGKMAGMDEKMHKSTYVSLFTLEGAKAMALDTLKKAELTL 270
Query: 271 AYFDPTRAAPL----DHLVN 286
F RA PL HL N
Sbjct: 271 EPFGE-RAEPLLAIARHLYN 289
>gi|358343453|ref|XP_003635816.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
gi|355501751|gb|AES82954.1| hypothetical protein MTR_011s1001, partial [Medicago truncatula]
Length = 277
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 155/283 (54%), Gaps = 32/283 (11%)
Query: 32 DEAVPLPHPAILHEAMRYSL--PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTM 89
DEA+ + P ++EAMRYS G KR +CI++CE+ GGS+ A ACA+E++
Sbjct: 1 DEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAA 60
Query: 90 AVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------I 137
++I DDLPC+D+ RRG+PSNH ++G AILA AL L QHI +
Sbjct: 61 SLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRV 120
Query: 138 IKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG 196
++ I VGS G+AAGQ +D+ V L I K G+ E S V G ++ G
Sbjct: 121 LRVIAEIARCVGSTGMAAGQFLDLKGGPNAVGL-----IQDKKFGEMAECSAVCGGLLAG 175
Query: 197 GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEM---REKTGRDMMRDKATYPKLVGID 253
++EIER+R +G+ VG+ Y + +DI++ PE RE +G+ +Y ++ G++
Sbjct: 176 AEDDEIERLRRYGRAVGVLYAIVDDILEERLKPEGDKDRENSGK-------SYVEVYGVE 228
Query: 254 GSKKHAKELIAEAKQELAYFDP--TRAAPLDHLVNFIVSFGNN 294
+ + A+EL A+A +EL F+ + PL VN+ + N
Sbjct: 229 KAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDRSFN 271
>gi|384208042|ref|YP_005593762.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
gi|343385692|gb|AEM21182.1| geranylgeranyl pyrophosphate synthase [Brachyspira intermedia
PWS/A]
Length = 294
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 20/291 (6%)
Query: 16 VNEYKALKAKQINEALD-----EAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+ EY ++ ++IN+ +D ++ L + I E ++Y L GGKRL L +CE+
Sbjct: 3 LKEYMNIRLEEINKTIDNVFDKSSIELENSFI--EMLKYPLDAGGKRLRPILTCLACELF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G ++ A A+EL+ T +++ DDLP +DNDDLRRGKP+ H +GEA AIL L
Sbjct: 61 NGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHIKYGEANAILVGDGLLT 120
Query: 130 LAMQHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A Q ++ K+ ++ A G G+ GQ +D+ E KE++ L +H KT
Sbjct: 121 HAFQLLSKTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G I +I G I N+ +IE + +G+ +G+A+Q+ +DI+DVI E KT G+D
Sbjct: 181 GAMIRGAIRLGA-IASENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDE 239
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELA-YFDPTRAAPLDHLVNFIV 289
K TY K G++G+K+ AK++I ++ + L Y D L L N+I+
Sbjct: 240 KEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKDSEAKNILIELANYII 290
>gi|398865851|ref|ZP_10621360.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM78]
gi|398242300|gb|EJN27919.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM78]
Length = 295
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N A++ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAAMETLFVAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + ++ + + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSDADAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALSSGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRELARYIV 291
>gi|227550446|ref|ZP_03980495.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257888474|ref|ZP_05668127.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257897151|ref|ZP_05676804.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|293377376|ref|ZP_06623580.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|431751267|ref|ZP_19539958.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|431763868|ref|ZP_19552416.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
gi|227180347|gb|EEI61319.1| Geranyltranstransferase [Enterococcus faecium TX1330]
gi|257824528|gb|EEV51460.1| polyprenyl synthetase [Enterococcus faecium 1,141,733]
gi|257833716|gb|EEV60137.1| polyprenyl synthetase [Enterococcus faecium Com12]
gi|292644068|gb|EFF62174.1| geranyltranstransferase [Enterococcus faecium PC4.1]
gi|430615707|gb|ELB52650.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2620]
gi|430621692|gb|ELB58444.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3548]
Length = 296
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++ A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|50085991|ref|YP_047501.1| geranyltranstransferase [Acinetobacter sp. ADP1]
gi|49531967|emb|CAG69679.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter sp. ADP1]
Length = 302
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 157/285 (55%), Gaps = 25/285 (8%)
Query: 25 KQINEALDEAVPLPHP---AILHEAMRYSLPGGKRLMSTLCIASCEMIGG-SQSVAMSMA 80
+ + ALD A LP P A+ H M GGKR+ LC A M + + A A
Sbjct: 21 QDLTTALD-AFDLPEPLKSAVYHTVML----GGKRVRPALCYAVASMEKNPNYAAARRAA 75
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA 140
A+EL+ ++ DDLPC+DND LRRG+P+ H FGE TA+LA L +A + +
Sbjct: 76 VAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLF 135
Query: 141 KNINS-------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
NS A S + GQ++D+ +EGKE+ +L IHR+KTG I+A+
Sbjct: 136 DQQNSVDASIVLRQMQILATASSKMVCGQVLDLQAEGKEIDQEQLENIHRNKTGALIQAA 195
Query: 188 IVSG-VIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKAT 245
++ G V + G ++ I +R FG+ +G+A+Q+ +DI+D+I S E KT G+D K+T
Sbjct: 196 LMMGAVTLFSGMDQAIPHLRQFGQRIGLAFQVQDDILDIISSTETLGKTAGKDQQVQKST 255
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
YP L+G+D ++ +AK L +A L YF A L +V F++S
Sbjct: 256 YPALMGLDAAQNYAKNLHDQALASLDYFGDA-AIELQQIVQFLLS 299
>gi|256847381|ref|ZP_05552827.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
gi|256716045|gb|EEU31020.1| polyprenyl synthetase [Lactobacillus coleohominis 101-4-CHN]
Length = 287
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 145/259 (55%), Gaps = 17/259 (6%)
Query: 25 KQINEALDEAVP--LPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQSV---AMSM 79
KQIN+ L + V P + + + GGKRL L +A C+ QS+ +
Sbjct: 7 KQINQYLSDHVENECAEPTLATSTIYSLMAGGKRLRPALTLAICDAF--QQSINQDVLRA 64
Query: 80 ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--- 136
+CA+ELL T ++I DDLP +DNDDLRRG P+NH+ FG A LA L LA Q ++
Sbjct: 65 SCAVELLHTYSLIHDDLPAMDNDDLRRGLPTNHRRFGAGMATLAGDGLLTLAFQWLSDNN 124
Query: 137 ------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ + + +A G G+ AGQ MDI++EG ++L +L +H KTG I ++++
Sbjct: 125 LATTTRLSLVRELATAAGPAGMVAGQAMDIHNEGHHLALPDLQLLHEKKTGALIRYAVLA 184
Query: 191 GVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKL 249
G II E + FG+Y G+A+Q+++D++DV+GS +M + +D + K TYP L
Sbjct: 185 GGIITNQAPETKHLLARFGEYYGLAFQIYDDLMDVVGSEAQMGKAVHKDQVEAKNTYPGL 244
Query: 250 VGIDGSKKHAKELIAEAKQ 268
+G+ +K + +A++
Sbjct: 245 LGLAETKHQLAIALVKARK 263
>gi|425056596|ref|ZP_18460047.1| geranyltranstransferase [Enterococcus faecium 505]
gi|403031626|gb|EJY43226.1| geranyltranstransferase [Enterococcus faecium 505]
Length = 296
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGNSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++ A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|431794334|ref|YP_007221239.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784560|gb|AGA69843.1| geranylgeranyl pyrophosphate synthase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 289
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 142/228 (62%), Gaps = 13/228 (5%)
Query: 42 ILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
IL E+M YSL GGKR+ L +A+ + +GG + + ACA+EL+ T ++I DDLP +D
Sbjct: 26 ILIESMNYSLAAGGKRIRPVLALAAAKAVGGDEESILPAACALELIHTYSLIHDDLPAMD 85
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAVGS 149
NDD RRG+ SNHK FG AILA AL A + +A + + + A G
Sbjct: 86 NDDYRRGRLSNHKAFGVGQAILAGDALLTYAFELLAQSITGVTPERQLRVIREVAQAAGP 145
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E K+++L+EL +HR KTG + S G I+ GG EE+IE + N+
Sbjct: 146 EGMVGGQVLDLAAEEKDLALAELERVHRLKTGAMLVVSARLGAILAGGTEEKIEALTNYA 205
Query: 210 KYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSK 256
+ +G+A+Q+ +DI+D+ G S + + D+ + KATYP L+GI+G+K
Sbjct: 206 QAIGLAFQIRDDILDLEGDSKSLGKPAQSDIRQHKATYPSLMGIEGAK 253
>gi|157692927|ref|YP_001487389.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
gi|157681685|gb|ABV62829.1| geranyltranstransferase [Bacillus pumilus SAFR-032]
Length = 296
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 165/268 (61%), Gaps = 15/268 (5%)
Query: 16 VNEYKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+NE+ + + I + L V L P L +M YSL GGKRL L +A G ++
Sbjct: 5 LNEFLTTRKQTIEDYLFTYVQELTIPKDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNE 64
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ + CA+E++ T ++I DDLPC+D+DDLRRGKP+NHKV+GEATA+LA AL + +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
I + ++++ + G+ G+ GQ D+ +E K+VSL+EL +IH KTG
Sbjct: 125 LITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELEYIHARKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
K + S+ +G ++ G ++++IE++R F ++G+A+Q+ +DI+D+ GS E + ++ G D
Sbjct: 185 KLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTA 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+K+TYP L+ + G+K+ E I AK+
Sbjct: 245 NEKSTYPSLLTLSGAKEKLDEHITRAKE 272
>gi|422322210|ref|ZP_16403252.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
gi|317402859|gb|EFV83401.1| geranyltranstransferase [Achromobacter xylosoxidans C54]
Length = 303
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 167/293 (56%), Gaps = 24/293 (8%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGG 71
E+ + + + + LD+ +P PA LHEAMRY+ L GGKR+ + L A+ C + G
Sbjct: 10 EWLQGRVRHVEDVLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGS 69
Query: 72 SQSVAMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+V S+ A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL
Sbjct: 70 VLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQ 129
Query: 129 CLAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA + +A I++A +++ A GS+G+A GQ +D+ S G+ +S +L +H K
Sbjct: 130 PLAFELLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLFSVGRSLSRDDLQLMHSMK 189
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
TG + S+ G I+ G + + + + + +G+A+Q+ +DI+DV S + + G+D
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDVYAQAMGLAFQVVDDILDVTADSASLGKTPGKD 249
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPT--RAAPLDHLVNFIV 289
+K TY L+G+D ++ A EL A LA +P + L L +FIV
Sbjct: 250 AAENKPTYVSLLGLDEARAFAGELREAA---LAALEPLGDAGSRLAELADFIV 299
>gi|425073666|ref|ZP_18476772.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
gi|404594937|gb|EKA95492.1| hypothetical protein HMPREF1310_03123 [Proteus mirabilis WGLW4]
Length = 307
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 157/288 (54%), Gaps = 19/288 (6%)
Query: 25 KQINEALDEAV-PLPHPAI-LHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++++EAL +A+ LP + L +AMRY +L GGKRL L EM + A
Sbjct: 20 QRVDEALKQALQTLPFSDMPLSQAMRYGALLGGKRLRPFLVYTVGEMFNVPVANLDVPAA 79
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
AIE + ++I DDLP +DNDDLRRGKP+ H FGEA AILA AL LA + +A
Sbjct: 80 AIECIHAYSLIHDDLPAMDNDDLRRGKPTCHIEFGEANAILAGDALQTLAFEILAKNAMP 139
Query: 137 -------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + +A G G+ GQ +D+++E K + L L IH HKTG I A++
Sbjct: 140 DVAIADRVAMIAELATASGLAGMCGGQALDLDAEDKSIDLVALEKIHLHKTGALIRAAVR 199
Query: 190 SGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYP 247
G + G ++ + + +G+A+Q+ +DI+DVIGS E ++ G D K+TYP
Sbjct: 200 LGALSAGQKGHDVLPALDKYAHSIGLAFQVQDDILDVIGSTEETGKRQGSDQEAGKSTYP 259
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIVSFGN 293
L+G+ ++K A+EL EA LA+ + + L L NFIV N
Sbjct: 260 ALLGLAQAQKKAQELYNEALDALAFLEQYEYDTSTLKQLANFIVERKN 307
>gi|398858335|ref|ZP_10614027.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM79]
gi|398239647|gb|EJN25354.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM79]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAV--PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNPPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + ++ + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G ++E++ ++++ + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|363892252|ref|ZP_09319420.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402838806|ref|ZP_10887309.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
gi|361964202|gb|EHL17246.1| hypothetical protein HMPREF9630_00413 [Eubacteriaceae bacterium
CM2]
gi|402272366|gb|EJU21587.1| polyprenyl synthetase [Eubacteriaceae bacterium OBRC8]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 151/267 (56%), Gaps = 13/267 (4%)
Query: 35 VPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQ 93
+ L + + + ++MRYSL GGKR+ + + + + +AC IE++ T ++I
Sbjct: 24 INLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVKKYLDVACVIEMIHTYSLIH 83
Query: 94 DDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKA-KN 142
DDLP +DND LRRGKP+NH V+G+A AILA AL A + I +KA +
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
I++ G G+ GQ+ DI +E K++S L +IH +KT K I AS+VS + +E ++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADENDM 203
Query: 203 ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKE 261
E +R + +GMA+Q+ +DI+D+IG+ ++ K+ G+D+ K TYPK GI+ SK+
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNG 263
Query: 262 LIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ A E++ + L +I
Sbjct: 264 YVNSAIDEISEIKDKDMSFFAQLATYI 290
>gi|300854301|ref|YP_003779285.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
gi|300434416|gb|ADK14183.1| geranyltranstransferase [Clostridium ljungdahlii DSM 13528]
Length = 293
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 142/235 (60%), Gaps = 12/235 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM+YSL GGKR+ L + + ++ + M +A AIE++ T ++I DDLP +DN
Sbjct: 32 VYEAMQYSLDAGGKRIRPLLFLLTYKLYKTDCNEVMDIAAAIEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRGKP+NHKVFGEA A+LA L HC+ + AI I+ + G++G
Sbjct: 92 DDLRRGKPTNHKVFGEAIAVLAGDGLLNEAMSLMFRHCIGKKDNAIRACSIISESAGADG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ +DI SE ++ + +L ++H KTG I+ SI+S + G ++ EI+++ +G+
Sbjct: 152 MVGGQTVDILSENTKIPIDQLYYMHSKKTGALIKGSIISAAVYAGASKAEIDKLSYYGEK 211
Query: 212 VGMAYQLWNDIVDVIGSPEMREKTGR-DMMRDKATYPKLVGIDGSKKHAKELIAE 265
+G+A+Q+ +DI+D+ G + K + D+ +K T+ GI+ K+ + +E
Sbjct: 212 LGLAFQIKDDILDLTGDTALLGKNIKSDLNNNKTTFISTYGINKCKEMCNSITSE 266
>gi|386265885|ref|YP_005829377.1| geranyltranstransferase [Haemophilus influenzae R2846]
gi|309973121|gb|ADO96322.1| Geranyltranstransferase [Haemophilus influenzae R2846]
Length = 296
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 158/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM+Y+L GGKR+ L A+ +M+G + +A AIE + ++I DDLP
Sbjct: 29 HNAPLLDAMKYALLLGGKRVRPFLVYATGQMLGAEKQSLDYVAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++++E+
Sbjct: 147 GSGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKKLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L F+++
Sbjct: 267 YQSALSELEKI-PFNTTALRALAEFVIT 293
>gi|363893702|ref|ZP_09320797.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
gi|361963504|gb|EHL16576.1| hypothetical protein HMPREF9629_01123 [Eubacteriaceae bacterium
ACC19a]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 151/267 (56%), Gaps = 13/267 (4%)
Query: 35 VPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQ 93
+ L + + + ++MRYSL GGKR+ + + + + +AC IE++ T ++I
Sbjct: 24 INLTYSSKILDSMRYSLSAGGKRIRPCIFVEVLKSYNIDVEKYLDVACVIEMIHTYSLIH 83
Query: 94 DDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKA-KN 142
DDLP +DND LRRGKP+NH V+G+A AILA AL A + I +KA +
Sbjct: 84 DDLPAMDNDTLRRGKPTNHMVYGDAIAILAGDALLNFAYELLFKFIKNNFQINSVKACEE 143
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
I++ G G+ GQ+ DI +E K++S L +IH +KT K I AS+VS + +E ++
Sbjct: 144 ISNCAGIYGMIGGQVSDIINENKDISSGNLEYIHENKTAKLIIASMVSAGYLANADENDM 203
Query: 203 ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKE 261
E +R + +GMA+Q+ +DI+D+IG+ ++ K+ G+D+ K TYPK GI+ SK+
Sbjct: 204 EHLRKYAYNLGMAFQISDDILDIIGNEKLLGKSVGKDVDEGKNTYPKYFGIEKSKEKLNG 263
Query: 262 LIAEAKQELAYFDPTRAAPLDHLVNFI 288
+ A E++ + L +I
Sbjct: 264 YVNSAIDEISEIKDKDMSFFAQLATYI 290
>gi|220931495|ref|YP_002508403.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
gi|219992805|gb|ACL69408.1| farnesyl-diphosphate synthase [Halothermothrix orenii H 168]
Length = 296
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 166/278 (59%), Gaps = 15/278 (5%)
Query: 26 QINEALDEAVPLPHPAI---LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
++N L E + + A+ L +AM+YSL GGKRL L + EM+ G + A+ +
Sbjct: 16 EVNSVLKEIMNIEKNALAPGLVKAMKYSLFSGGKRLRPILTLMVAEMLDGDRDSALRVGA 75
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
+IEL+ T ++I DDLP +D+DD RRGKPSNHKVFG ATAILA AL A ++
Sbjct: 76 SIELVHTYSLIHDDLPSMDDDDFRRGKPSNHKVFGTATAILAGDALLTFAFNILSKLNLP 135
Query: 137 ---IIK-AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
++K + I+ G G+ GQ++D+ +E KE+SL EL IH KTG ++SI++G
Sbjct: 136 PDKVLKIIEVISQGAGHNGMVGGQVLDLEAEDKEISLEELKKIHSGKTGALFKSSILAGA 195
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVG 251
+ E+ + + +Y+G+ +Q+ +DI+DV G+ E + ++ GRD +KATYP+L+G
Sbjct: 196 YCANPDRTELTALERYARYLGLTFQIVDDILDVTGNEEVLGKRVGRDDELNKATYPRLLG 255
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ + K A+ +A+ L F RA L LV++I+
Sbjct: 256 LKQAVKEAEFNAEKARDSLGPFGE-RAFLLKQLVDYIL 292
>gi|338812850|ref|ZP_08625003.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
gi|337275149|gb|EGO63633.1| geranylgeranyl pyrophosphate synthase [Acetonema longum DSM 6540]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 164/292 (56%), Gaps = 15/292 (5%)
Query: 16 VNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ EY K I+ L+ +P +P ++ EAMRYS GGKR+ L +A+ + + G
Sbjct: 5 LKEYCRQKVACIDHKLELLLPKQGQYPPVILEAMRYSVFAGGKRMRPVLLMAAADAVNGR 64
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+A +E++ T ++I DDLP +D+DD RRGKP+NHKV+GEA AILA AL A
Sbjct: 65 GEEYTHVAAGLEMIHTYSLIHDDLPAMDDDDYRRGKPTNHKVYGEAMAILAGDALLTYAF 124
Query: 133 Q----------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+ + + I +AVG G+ GQ MD+ SEGK++ L E+ ++H+ KTG
Sbjct: 125 EVMGRQPDVLSDVLLRVIAEIAAAVGPLGMVGGQAMDLFSEGKQIGLQEIEYLHKAKTGA 184
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMR 241
+ASI +G ++ G EE+++ + + Y G+A+Q+ +DI+DV G+ E+ + G D
Sbjct: 185 LFKASIRAGAMLAGAGEEQLQDLTQYSDYFGLAFQITDDILDVTGNQAELGKPVGSDSKN 244
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
KATY L +D +K A E + A L +F P A L L +++S N
Sbjct: 245 QKATYVSLYSVDKAKSIAGEAVDGALNTLKFFGP-EADILRDLAKYLLSRNN 295
>gi|398901782|ref|ZP_10650573.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM50]
gi|398179393|gb|EJM67005.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM50]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSASSQARVNAALETLFNAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + ++ + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G ++E++ ++++ + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKSYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|90022863|ref|YP_528690.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
gi|89952463|gb|ABD82478.1| farnesyl-diphosphate synthase [Saccharophagus degradans 2-40]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 144/257 (56%), Gaps = 13/257 (5%)
Query: 45 EAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDD 103
EAMRYSL GGKR+ L A+ GG + A ACAIE + T ++I DDLP +D+D
Sbjct: 36 EAMRYSLLLGGKRVRPVLVYAAAYATGGISAAADDCACAIEAIHTYSLIHDDLPAMDDDA 95
Query: 104 LRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEGIA 153
LRRG+P+ H + EATAILA AL C A + +A + + A G+ G+
Sbjct: 96 LRRGQPTCHIAYSEATAILAGDALQCQAFEWLANSQHMPASAALQAIAALAKASGASGMV 155
Query: 154 AGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVG 213
GQ +D+ + K V L L +H+HKTG I AS+ G I G + ++R + +G
Sbjct: 156 LGQAIDLAAVDKSVDLQHLETMHQHKTGALISASVEMGAIAAGATPTQTAQLRQYASAIG 215
Query: 214 MAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAY 272
+A+Q+ +DI+DV + + ++ G D R+K TY L+G+DG+K A EL+ +A +
Sbjct: 216 LAFQVQDDILDVTANTATLGKEAGADAERNKPTYVSLLGLDGAKHKASELLQQALASIKD 275
Query: 273 FDPTRAAPLDHLVNFIV 289
FD RA L L +IV
Sbjct: 276 FDE-RADILRQLATYIV 291
>gi|506378|gb|AAA96328.1| geranylgeranyl pyrophosphate synthase, partial [Arabidopsis
thaliana]
Length = 157
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 114/156 (73%), Gaps = 12/156 (7%)
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
A+E++ TM++I+DDLPC+DNDDLRRGKP+ HKVFGE+ AIL+ AL LA +H+
Sbjct: 1 AVEMMHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVS 60
Query: 137 ---IIKA-KNINSAVGSEGIAAGQIMDINSEGKE---VSLSELNFIHRHKTGKFIEASIV 189
+++A K + ++G++G+ AGQ D++SEG E V L +L +IH HKTG +EAS V
Sbjct: 61 SKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAV 120
Query: 190 SGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDV 225
G +IGGG E+EIE++RNF + +G+ +Q+ +DI+DV
Sbjct: 121 IGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDV 156
>gi|418293779|ref|ZP_12905681.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379065164|gb|EHY77907.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 157/273 (57%), Gaps = 16/273 (5%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 24 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHD 83
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV------- 147
DLP +D+DDLRRG+P+ HK F EA AILA L LA + +A + ++A+
Sbjct: 84 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAV 143
Query: 148 -----GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEEE 201
G G+ GQ +D+ S G ++ L +HRHKTG IEAS+ G + G + +
Sbjct: 144 LARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADADN 203
Query: 202 IERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAK 260
+ + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +A
Sbjct: 204 LASLSQYARTIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYAL 263
Query: 261 ELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
EL +A L FD T A PL L +IV N
Sbjct: 264 ELRDQALHALRPFD-TAAEPLRELARYIVERRN 295
>gi|255524169|ref|ZP_05391129.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296186627|ref|ZP_06855029.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
gi|255512154|gb|EET88434.1| Polyprenyl synthetase [Clostridium carboxidivorans P7]
gi|296048664|gb|EFG88096.1| putative geranyltranstransferase [Clostridium carboxidivorans P7]
Length = 293
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 142/240 (59%), Gaps = 12/240 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM YSL GGKR+ L + + + + +A A+E++ T ++I DDLPC+DN
Sbjct: 32 VYEAMEYSLGAGGKRIRPLLLLLTYMLYKDDFEKVLPIASAVEMIHTYSLIHDDLPCMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRGKP+NHKVFGEA A+LA L C+ QH I I + G+EG
Sbjct: 92 DDLRRGKPTNHKVFGEAVAVLAGDGLLNEGMSIMLKSCMNEQHNFIKACSFIAESAGAEG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ +DI SE ++ + +L ++H KTG I+ASI++G I+G + +IE + +G+
Sbjct: 152 MVGGQTVDILSENTKIPIDQLYYMHSKKTGAIIKASIIAGAILGEAPKRDIENLEYYGQK 211
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+A+Q+ +DI+D++G E + +K D+ +K T+ G++ + + AE + L
Sbjct: 212 LGLAFQIKDDILDIVGDTEVLGKKAKSDLDNNKTTFITTYGLNKCIEMCNSITAECIEVL 271
>gi|304407042|ref|ZP_07388696.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344029|gb|EFM09869.1| Polyprenyl synthetase [Paenibacillus curdlanolyticus YK9]
Length = 304
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 165/286 (57%), Gaps = 28/286 (9%)
Query: 7 NDTLPKFFQVNEYKALKAKQINEALDEAVPLPH--PAILHEAMRYSL-PGGKRL-----M 58
ND+L + +Y + A + AL +P PA+L E+M YSL GGKRL +
Sbjct: 2 NDSLT----IQQYISQTASDVESALQTILPTSWDVPALLKESMMYSLQAGGKRLRPALVL 57
Query: 59 STLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEA 118
+ C+ + + AM +ACAIE++ T ++I DDLP +DNDD RRGK +NHKVFG+A
Sbjct: 58 AAAEAVKCD--SRAAAAAMPVACAIEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVFGDA 115
Query: 119 TAILACQALHCLAM--------QH-----IAIIKAKNINSAVGSEGIAAGQIMDINSEGK 165
AILA AL A QH +++ + ++ G+ G+ GQ D+ E
Sbjct: 116 MAILAGDALLTHAFHAIVQSTRQHGVSAEVSLKIVEELSVMAGASGMVGGQAADMLGEQG 175
Query: 166 EVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDV 225
S+ +L +IH HKT I S+ +G +IGG EE++E++ FG +G+A+Q+ +DI+D+
Sbjct: 176 VTSIDQLRYIHLHKTSDLIVFSLRAGAMIGGATEEQLEQITKFGTAIGLAFQIQDDILDL 235
Query: 226 IGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G ++ +KT D+ + K TYP L+G++ S+ + L ++AK+ L
Sbjct: 236 VGDEAKLGKKTNSDVEQQKVTYPFLIGLNESRAEVERLTSDAKRAL 281
>gi|320540321|ref|ZP_08039973.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
gi|320029641|gb|EFW11668.1| putative geranyltranstransferase [Serratia symbiotica str. Tucson]
Length = 306
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 157/296 (53%), Gaps = 18/296 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLP-HPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQ 73
++ A + + LD PLP + L +MR+ +L GGKRL L + +M G +Q
Sbjct: 11 ADQLLAFRQRTDRTLLDFIAPLPFNDGDLVASMRHGALLGGKRLRPFLVYTTGQMFGIAQ 70
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ + A A+E + ++I DDLP +DNDDLRRG+P+ H FGEA AILA AL LA
Sbjct: 71 NNLDAPAAAVECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQSLAFS 130
Query: 134 HIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
+A + + +A G G+ GQ MD+++EGK++ L+ L IHRHKTG
Sbjct: 131 ILADAEMPDVALRDRLAMVSELAAASGVAGMCGGQSMDLDAEGKQIGLAALEQIHRHKTG 190
Query: 182 KFIEASIVSGVIIGGGN-EEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDM 239
I A+I G + G + + + + +G+A+Q+ +DI+DVIG E + ++ G D
Sbjct: 191 ALIRAAIRLGALAAGSSGRAALPLLDRYAAAIGLAFQVQDDILDVIGETEKIGKRQGADQ 250
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAE--AKQELAYFDPTRAAPLDHLVNFIVSFGN 293
K+TYP L+G+D +K EL E A APL L +FI+ N
Sbjct: 251 QHRKSTYPALLGLDYAKVKTWELYQEALAALNALAAQSYDTAPLRALASFIIKRDN 306
>gi|226951627|ref|ZP_03822091.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
gi|226837608|gb|EEH69991.1| geranyltranstransferase (farnesyldiphosphate synthase)
[Acinetobacter sp. ATCC 27244]
Length = 303
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 160/274 (58%), Gaps = 21/274 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P A +H A+ + GGKR+ LC A+ + + A A+EL+ ++
Sbjct: 31 SIPEPLKAAVHHAV---MLGGKRVRPALCYATASLKPNHNFAAVRRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ----HIAIIKAKNINS--- 145
DDLPC+DND LRRG+P+ H VFGE TA+LA L +A + + + + I+S
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVVFGEDTALLAGDILQSMAFEILGSRLFDEQGQGIDSQIV 147
Query: 146 -------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
A S + AGQ++D+ +EGK+V +EL IHR+KTG I+A+I+ G V + G
Sbjct: 148 LKQMQILATASSKMVAGQVLDLQAEGKQVDQTELENIHRNKTGALIQAAIMMGAVTVFAG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
+ I ++R FG+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ +K
Sbjct: 208 TDPAIPKLRQFGQTIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAK 267
Query: 257 KHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+A+ L +A LAYF +A L + +F+++
Sbjct: 268 TYAQTLHDQAFDALAYFG-DQAQELTAISHFLLA 300
>gi|429331879|ref|ZP_19212619.1| polyprenyl synthetase [Pseudomonas putida CSV86]
gi|428763390|gb|EKX85565.1| polyprenyl synthetase [Pseudomonas putida CSV86]
Length = 295
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+ +++ AL+ P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IRAYQTACQARVDAALEPLFQAPSVELTRLYEAMRYSVMNGGKRVRPLLAYAACEALGGT 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI------------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + + A G G+ GQ +D+ S G ++ + L F+HRHKT
Sbjct: 122 SALLDPRLSSQSDATRLAMVQTLAKAAGPAGMVGGQAIDLGSVGLKLDQAALEFMHRHKT 181
Query: 181 GKFIEASIVSGVIIG-GGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + + E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASERAGDAELKALQQYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A + FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQAIDAVRPFDAA-AEPLRALARYIVERRN 295
>gi|238783627|ref|ZP_04627648.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
gi|238715505|gb|EEQ07496.1| Geranyltranstransferase [Yersinia bercovieri ATCC 43970]
Length = 306
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 159/288 (55%), Gaps = 19/288 (6%)
Query: 25 KQINEAL-DEAVPLPH-PAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
+++N+AL D PLP + L EAMRY ++ GGKRL L A+ +M G S + + A
Sbjct: 19 QRVNQALLDFIAPLPFGESDLVEAMRYGAVLGGKRLRPYLVYATGQMFGLSLTALDAPAA 78
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----- 136
AIE + ++I DDLP +DNDDLRRG+P+ H FGEA AILA AL LA +A
Sbjct: 79 AIECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLAFTILAEAEMP 138
Query: 137 -------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIV 189
+ + A G G+ GQ +D+ +E +++SL+EL IHRHKTG I A++
Sbjct: 139 DVADKDRLAMVAELAHASGVAGMCGGQALDLEAEARQISLAELEQIHRHKTGALIRAAVR 198
Query: 190 SGVIIGGGNEEEIERMRN-FGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYP 247
G + G + + + + +G+A+Q+ +DI+DVIG + + ++ G D K+TYP
Sbjct: 199 LGALAAGARGRAALPLLDRYAEAIGLAFQVQDDILDVIGDTATIGKRQGSDQQLGKSTYP 258
Query: 248 KLVGIDGSKKHAKELIAEAKQELAYFDPTRA--APLDHLVNFIVSFGN 293
L+G+D +K A +L EA L APL L FI+ N
Sbjct: 259 ALLGLDCAKAKAMDLYQEALSALNALSAQSYNIAPLQALACFIIERDN 306
>gi|430840707|ref|ZP_19458630.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|431741902|ref|ZP_19530802.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
gi|430494913|gb|ELA71131.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1007]
gi|430601055|gb|ELB38677.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E2039]
Length = 296
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 141/225 (62%), Gaps = 12/225 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L +A+ V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + G++G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGAQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGS 255
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKT 255
>gi|410460635|ref|ZP_11314310.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
gi|409926893|gb|EKN64045.1| geranylgeranyl pyrophosphate synthase [Bacillus azotoformans LMG
9581]
Length = 275
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 155/245 (63%), Gaps = 16/245 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P I+ E+M YSL GGKRL L A+ G + + + +ACA+E++ T ++I DDLP
Sbjct: 11 PEIIKESMIYSLNAGGKRLRPILLFATLHAFGKDEKLGIDVACALEMIHTYSLIHDDLPS 70
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNIN------------SA 146
+D+DDLRRGKP+NHKV+GEA AILA L + + IA K+K ++ A
Sbjct: 71 MDDDDLRRGKPTNHKVYGEAVAILAGDGLLTHSFEIIA--KSKELSDTLKANIIAFLAQA 128
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G G+ GQ+ D+ E K++++ EL +IH HKTGK + ++V+G II G ++++ E +
Sbjct: 129 AGPSGMVGGQVADLLGEQKDLNVEELEYIHEHKTGKLLRFAVVAGAIIAGASKDQQECLD 188
Query: 207 NFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F +++G+A+Q+ +DI+D+ G ++ + G D+ +DK+TYPKL+ ++G+K + +
Sbjct: 189 QFARHLGLAFQIKDDILDIEGDVKQIGKPVGSDVGKDKSTYPKLLTLEGAKNKCNDHLTS 248
Query: 266 AKQEL 270
AK+ L
Sbjct: 249 AKEWL 253
>gi|405354222|ref|ZP_11023602.1| Octaprenyl-diphosphate synthase [Chondromyces apiculatus DSM 436]
gi|397092465|gb|EJJ23223.1| Octaprenyl-diphosphate synthase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 310
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 150/257 (58%), Gaps = 21/257 (8%)
Query: 27 INEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIEL 85
+ ALDE P P L A+R + L GKRL LC+ +CE +GGS A+ ACAIE+
Sbjct: 30 VTRALDEQFP-PGSGPLTAAIREAVLADGKRLRPILCLEACEWVGGSLKAALPAACAIEM 88
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA----- 140
+ M+++ DDLP +D+ + R G+P+ HKV GEA AILA AL A +A I+A
Sbjct: 89 IHKMSLVHDDLPAMDDAETRNGRPALHKVHGEALAILAGDALLVHAFGLLASIRAVPAER 148
Query: 141 -----KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG 195
+ A+G+ G+A GQ +D+ S+ ++V+ +L+ +H KT F EA++V G +G
Sbjct: 149 VLGAISRLCQALGTAGLAGGQALDVLSQSEDVTPEKLDHVHTWKTASFFEAAMVIGAEVG 208
Query: 196 GGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGRDMMRDKAT-YPKLVGIDG 254
G + ++E + +GK +G A+Q+ +D++D + + + +AT Y +L G+DG
Sbjct: 209 GADASQVEALARYGKLLGRAFQISDDLLDA--------RDVKALAHGEATNYVQLHGVDG 260
Query: 255 SKKHAKELIAEAKQELA 271
+++ +EL+ +A LA
Sbjct: 261 ARRKLRELLDQAVSALA 277
>gi|27363789|ref|NP_759317.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
gi|27359906|gb|AAO08844.1| Octaprenyl-diphosphate synthase [Vibrio vulnificus CMCP6]
Length = 298
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 162/304 (53%), Gaps = 30/304 (9%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHP-AILHEAMRYSLP-GGKRLMSTLCIAS 65
D L F Q N +Q+N LD+ LPH L +AMRY L GGKR L A+
Sbjct: 7 DVLASFQQRNN------QQLNLWLDK---LPHQNQALIQAMRYGLVLGGKRARPFLVYAT 57
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
EM+G SQ + A AIE + ++I DDLP +D+D+LRRG+P+ H F EATAIL
Sbjct: 58 GEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGD 117
Query: 126 ALHCLAM--------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSE 171
AL LA Q +A+I+A + A G++G+ GQ +D+ +E + V+L E
Sbjct: 118 ALQTLAFTILAEGTLSADGETQRVAMIQA--LAQASGAQGMCIGQALDLAAENRAVTLEE 175
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPE 230
L IHR+KTG I ++ G + G I ++ + +G+A+Q+ +DI+D+I E
Sbjct: 176 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 235
Query: 231 MREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K G D +K+TYP L+G++G+ + A L+ EA Q L P L+ ++V
Sbjct: 236 TLGKPQGSDQELNKSTYPSLLGLEGAMEKAHTLLHEALQALEAI-PYNTQHLEEFARYVV 294
Query: 290 SFGN 293
N
Sbjct: 295 ERKN 298
>gi|398948108|ref|ZP_10672588.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM33]
gi|398161116|gb|EJM49359.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM33]
Length = 295
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 167/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFTAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSTSEAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IE S+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEVSVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|160934292|ref|ZP_02081679.1| hypothetical protein CLOLEP_03163 [Clostridium leptum DSM 753]
gi|156866965|gb|EDO60337.1| polyprenyl synthetase [Clostridium leptum DSM 753]
Length = 293
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 153/288 (53%), Gaps = 25/288 (8%)
Query: 26 QINEALDEAVPLPHPAILH----EAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMA 80
+I EAL A LP L EAM YSL GGKR+ TL + C + GG AM A
Sbjct: 10 RIEEAL--ASYLPAKDCLQKDVIEAMEYSLLAGGKRIRPTLTLEFCRVCGGDVQAAMPFA 67
Query: 81 CAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------QH 134
CA+E++ + ++I DDLPC+DN DLRRG+P+NH +GE A+LA L LA +
Sbjct: 68 CAVEMIHSYSLIHDDLPCMDNSDLRRGRPANHIQYGEDIALLAGDGLLTLAFETALSPES 127
Query: 135 IAIIKAKN-------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEAS 187
I + A+ + A G+EG+ GQ++D+ E + + L + R KTG I+A+
Sbjct: 128 IKLAGAQRGAEAARLLAKAAGAEGMVGGQVIDLQHENQRAPIEVLLEMDRKKTGALIQAA 187
Query: 188 IVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATY 246
G + G ++++ E + VG+A+Q+ +DI+DVI PE K G D +K+TY
Sbjct: 188 AQMGCAVAGADQKQREAAVEYAACVGLAFQIRDDILDVISDPETLGKPVGSDDKNEKSTY 247
Query: 247 PKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
L+G++ +++ EL +A+ L+ F A L F S N
Sbjct: 248 VSLLGMEKAQQLVNELTQQAESALSAFSEDTA----FLREFAQSLANR 291
>gi|293571745|ref|ZP_06682764.1| geranyltranstransferase [Enterococcus faecium E980]
gi|431066268|ref|ZP_19493891.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|431099312|ref|ZP_19496478.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|431738301|ref|ZP_19527246.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
gi|291608202|gb|EFF37505.1| geranyltranstransferase [Enterococcus faecium E980]
gi|430568307|gb|ELB07355.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1604]
gi|430570813|gb|ELB09752.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1613]
gi|430597739|gb|ELB35522.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1972]
Length = 296
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 141/225 (62%), Gaps = 12/225 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L +A+ V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + G++G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGAQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGS 255
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKT 255
>gi|376261504|ref|YP_005148224.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
gi|373945498|gb|AEY66419.1| geranylgeranyl pyrophosphate synthase [Clostridium sp. BNL1100]
Length = 294
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 143/244 (58%), Gaps = 13/244 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
+ EAM YSL GGKRL L +A EM+ + ++ CAIE++ T ++I DDLP +DN
Sbjct: 32 IKEAMSYSLLAGGKRLRPLLALAVAEMLDKPLNEVINFGCAIEMIHTYSLIHDDLPAMDN 91
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ----------HIAIIKAKNINS-AVGSE 150
DD RRGKP+NHKVFGEA AILA L +A + I ++A I + A G+
Sbjct: 92 DDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDTVESNSIEKMRAAGIVAKAAGAL 151
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ++D+ SEGK + L +HR KTG I+A + + +I G +++E E + +
Sbjct: 152 GMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAAVICGADKKEFELLSGYAA 211
Query: 211 YVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
+G+A+Q+ +DI+D+ G+ E M + G D +K+TY + G++ SKK + + E
Sbjct: 212 NLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYGLEESKKLLETVTQEGISC 271
Query: 270 LAYF 273
L F
Sbjct: 272 LEAF 275
>gi|398837497|ref|ZP_10594790.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM102]
gi|398118789|gb|EJM08515.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM102]
Length = 295
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 165/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAV--PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSATSQARVNAALETLFNPPSPELARLYEAMRYSVMNGGKRVRPLLVYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSEGIA------------AGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + + ++ + ++ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSSCDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IE S+ G + G ++E++ ++++ + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEVSVKLGALASGHAAKDELKSLQSYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIV 291
>gi|392426568|ref|YP_006467562.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
gi|391356531|gb|AFM42230.1| geranylgeranyl pyrophosphate synthase [Desulfosporosinus
acidiphilus SJ4]
Length = 291
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 147/244 (60%), Gaps = 12/244 (4%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E+M YSL GGKR+ L +A+ E +GG+ + A A+EL+ T ++I DDLP +DN
Sbjct: 30 LSESMSYSLVGGGKRIRPVLALAAAEAVGGNPEKILPAAIALELIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DD RRG+ SNHKVFGEA AILA L A + +A + + + +A G G
Sbjct: 90 DDYRRGRLSNHKVFGEANAILAGDGLLTYAFEFLADPILGQPEKQLRVIREVAAAAGKNG 149
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI E K++SL+E+ IH+ KTG + AS G I+ GG+EE+IE + N+ +
Sbjct: 150 MVGGQVLDIAGEEKKLSLTEIEEIHKAKTGALLIASARLGGILAGGSEEQIEALTNYAQA 209
Query: 212 VGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+G+A+Q+ +DI+DVIG E K G D+ + K+TY L+G++ +K A+ L
Sbjct: 210 LGLAFQIKDDILDVIGDSETLGKPAGSDLRQGKSTYVSLLGLEEAKHQLHAQTQRAQSAL 269
Query: 271 AYFD 274
F+
Sbjct: 270 KLFE 273
>gi|317122006|ref|YP_004102009.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
gi|315591986|gb|ADU51282.1| farnesyl-diphosphate synthase [Thermaerobacter marianensis DSM
12885]
Length = 308
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 156/281 (55%), Gaps = 27/281 (9%)
Query: 32 DEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVA---MSMACAIEL 85
+E +P P PA +HEAMRYS L GGK L L +A+ +GG ++V A A+EL
Sbjct: 28 EEVLPGPDVPPARIHEAMRYSALAGGKLLRPVLVMAAARCVGGPEAVTPAVRRAAAAVEL 87
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ------------ 133
+ T ++I DDLP +D+D +RRG+P+NH VFGEA AILA AL LA +
Sbjct: 88 VHTYSLIHDDLPAMDDDAMRRGQPANHVVFGEAMAILAGDALLTLAFEVLAGLPRWGADP 147
Query: 134 HIAIIKAKNINSAVGSEGIAAGQIMDINS-EGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+A+ A+ + A G+ G+ GQ+ D+++ +G + L+ L IHR KTG A + G
Sbjct: 148 AVALAVAEELARAAGTAGLIGGQVDDLDAVQGAPLDLARLQSIHRRKTGALFRACVRMGA 207
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVG 251
+ G E E+E + + G A+Q+ +DI+DV G E+ + G D R K T P LVG
Sbjct: 208 RLAGAGEGELEALTAYATAFGEAFQIVDDILDVTGDEAELGKPVGSDARRGKVTVPGLVG 267
Query: 252 IDGSKKHAKELIAEAKQE-LAYFDP--TRAAPLDHLVNFIV 289
++ A+ L AEA + +A DP RAA L L ++
Sbjct: 268 LE----RARRLAAEATERAVASLDPLGDRAALLAWLARSLL 304
>gi|418019309|ref|ZP_12658817.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
gi|347605326|gb|EGY29784.1| Geranylgeranyl pyrophosphate synthase [Candidatus Regiella
insecticola R5.15]
Length = 313
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 154/263 (58%), Gaps = 17/263 (6%)
Query: 22 LKAKQINEALDEAV-PLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMS 78
L ++I+E L + PLP H L EA+RY+ L GGKR+ L A+ +M G S S
Sbjct: 16 LYQRRIDEKLKNFIQPLPFHSRQLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPSSLDV 75
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-- 136
A A+E + +++ DDLP +D+D+LRRG+PS H FGEA AILA AL LA +A
Sbjct: 76 AAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQ 135
Query: 137 ----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
+ + A+G+ G+ AGQ +D+ +E ++SL+ L IHRHKTG I
Sbjct: 136 PMPDVTLENRLKMVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALIRT 195
Query: 187 SIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKA 244
++ G + G +E+ + + ++ +G+A+Q+ +DI+D+ G + M ++ G D R+K+
Sbjct: 196 AVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGETARMGKQQGADQQRNKS 255
Query: 245 TYPKLVGIDGSKKHAKELIAEAK 267
TY L+G++G+K AK+ +A+
Sbjct: 256 TYSSLLGLEGAKIKAKKFCQDAQ 278
>gi|81428294|ref|YP_395294.1| farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
gi|78609936|emb|CAI54983.1| Farnesyl-diphosphate synthase [Lactobacillus sakei subsp. sakei
23K]
Length = 290
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 142/255 (55%), Gaps = 15/255 (5%)
Query: 18 EYKALKAK---QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS- 72
++K L A+ Q + L + L ++M YS + GGKRL L A E G S
Sbjct: 3 DFKQLAARELPQFDAYLKRELAKIQEPTLQKSMTYSVMAGGKRLRPLLLFAVLESTGQSI 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A A A+EL+ + ++I DDLP +DNDDLRRG+P+NHKVFGEA AILA L LA
Sbjct: 63 DETAFRAAGALELIHSYSLIHDDLPAMDNDDLRRGQPTNHKVFGEAEAILAGDGLLTLAF 122
Query: 133 QHIAIIK---------AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKF 183
+ +A + + + A G+ G+ AGQI DI E K ++L++L +H KTG
Sbjct: 123 EWLATLNVTAEQRIELVRLLAQAAGANGMVAGQIEDIEGEHKTLTLAQLQQVHHLKTGCL 182
Query: 184 IEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRD 242
IE ++ G ++ E E +R F + G+A+Q+ +DI+DV + EM + +D
Sbjct: 183 IEVAVAMGAVLAQLGEVETTALRGFAQQFGLAFQIQDDILDVTSTTAEMGKAVHKDAAEQ 242
Query: 243 KATYPKLVGIDGSKK 257
K T+P L+G+ G+++
Sbjct: 243 KNTFPILLGMSGAQE 257
>gi|146308855|ref|YP_001189320.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|421503890|ref|ZP_15950835.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
gi|145577056|gb|ABP86588.1| farnesyl-diphosphate synthase [Pseudomonas mendocina ymp]
gi|400345394|gb|EJO93759.1| farnesyl-diphosphate synthase [Pseudomonas mendocina DLHK]
Length = 295
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 169/293 (57%), Gaps = 22/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ AL+ P + L+EAMRYS + GGKR+ L A+CE + G+
Sbjct: 2 IKAYQASCQARVDAALEPLFQPPRAELQRLYEAMRYSVMNGGKRVRPLLVYAACEALDGN 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA+AILA L LA
Sbjct: 62 LDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEASAILAGDGLQSLAF 121
Query: 133 QHIA--------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+ +A +I A ++SA G G+ GQ +D+ S G+++ + L +HRH
Sbjct: 122 EVLADRRRNPQDAEVRLQMIDA--LSSAAGPAGMVGGQAIDLGSVGQQLDQAALETMHRH 179
Query: 179 KTGKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
KTG IEAS++ G + G +E ++ + + + VG+A+Q+ +DI+DV KT G
Sbjct: 180 KTGALIEASVLLGALASGNADELSLKALLQYARAVGLAFQVQDDILDVESDTATLGKTQG 239
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+D DK TYP L+G+D +K +A EL +A L F ++A PL L +IV
Sbjct: 240 KDEANDKPTYPALLGLDAAKDYALELRDQALHVLRPFG-SQAEPLRELARYIV 291
>gi|452746756|ref|ZP_21946566.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
gi|452009233|gb|EME01456.1| geranyltranstransferase [Pseudomonas stutzeri NF13]
Length = 296
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 159/275 (57%), Gaps = 20/275 (7%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 25 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGGACAVELIHAYSLVHD 84
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN------------ 142
DLP +D+DDLRRG+P+ HK F EA AILA L LA + A+ +A++
Sbjct: 85 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFE--AMAQAEHNPQDATLRLRMF 142
Query: 143 --INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNE 199
+ A G G+ GQ +D+ S G ++ + L +HRHKTG IEAS+ G + G +
Sbjct: 143 AVLARAAGPAGMVGGQAIDLGSVGLKLDRNALELMHRHKTGALIEASVQLGALASGHADA 202
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKH 258
+ + + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +
Sbjct: 203 DNLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAY 262
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A EL +A L FD T A PL L +IV N
Sbjct: 263 ALELRDQALHALRPFD-TAAEPLRELARYIVERRN 296
>gi|319776299|ref|YP_004138787.1| geranyltranstransferase [Haemophilus influenzae F3047]
gi|317450890|emb|CBY87115.1| geranyltranstransferase [Haemophilus influenzae F3047]
Length = 296
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 155/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L +AM+Y+L GGKR+ L + +M+G + +A AIE + ++I DDLP
Sbjct: 29 HNAPLLDAMKYALLLGGKRVRPFLVYTTGQMLGAGKQTLDYVAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALVQILAK 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI--E 203
+ G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +
Sbjct: 147 SSGIQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFADKTLEQ 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAETIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFDTTALRALAEFIIT 293
>gi|295695407|ref|YP_003588645.1| polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
gi|295411009|gb|ADG05501.1| Polyprenyl synthetase [Kyrpidia tusciae DSM 2912]
Length = 295
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 158/266 (59%), Gaps = 14/266 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
++ E+ A+ +++ALD +P A LHEAMRYSL GGKRL L +A+CE GGS
Sbjct: 4 ELREFWEAGARAVDDALDALIPPGKGAGRLHEAMRYSLFAGGKRLRPLLAMAACEGAGGS 63
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+EL+ T ++I DDLP +D+DD RRG+P+NH+VFGEA A+LA AL LA
Sbjct: 64 LREALPAACALELVHTYSLIHDDLPAMDDDDYRRGRPTNHRVFGEAMAVLAGDALLTLAF 123
Query: 133 QHIA---------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSE--LNFIHRHKTG 181
+A I + A G +G+ GQ +DI + G + L +HR KTG
Sbjct: 124 GVLAKAPLPATTRIRLVDELAEASGKDGMVGGQALDIEATGADGQPDPELLRDLHRKKTG 183
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMM 240
I AS+ G + G +E ++R+ +G+ VG+AYQ+ +D++DV G + + + GRD
Sbjct: 184 ALIIASLRMGGLCAGADESLLDRLSAYGQAVGLAYQIVDDLLDVGGDARRIGKAVGRDAA 243
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEA 266
+K T+P + G+D S++ + L EA
Sbjct: 244 LNKLTWPGVYGVDRSREDVRRLTKEA 269
>gi|254236932|ref|ZP_04930255.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
gi|126168863|gb|EAZ54374.1| geranyltranstransferase [Pseudomonas aeruginosa C3719]
Length = 295
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G E + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAESASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+K TYP L+G++ +K +A EL A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|152979039|ref|YP_001344668.1| polyprenyl synthetase [Actinobacillus succinogenes 130Z]
gi|150840762|gb|ABR74733.1| Polyprenyl synthetase [Actinobacillus succinogenes 130Z]
Length = 296
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 151/267 (56%), Gaps = 19/267 (7%)
Query: 43 LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM+Y L GGKR+ L A+ +M+G + A AIE + ++I DDLP +DN
Sbjct: 33 LADAMKYGLLLGGKRIRPFLVYATGDMLGADLNALDYAAAAIESIHAYSLIHDDLPAMDN 92
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA----------KNINSAVGSEG 151
D+LRRGKP+ H F ATAILA AL A + I A + ++ A G G
Sbjct: 93 DELRRGKPTCHIAFDHATAILAGDALQTFAFEIITKSTALCAEQKLKLVQELSRAAGVRG 152
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIERMRNFG 209
+ GQ +D+ +E K+V+L+EL IHR+KTG + A+++ G I N R++ +
Sbjct: 153 MCLGQSLDLLAEQKKVTLAELELIHRNKTGALLTAALMMGFICSPHYANHALACRLKQYA 212
Query: 210 KYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+G+A+Q+ +DI+D+ G+ E+ + G D+ DK+TYPK++G+DG+K A+EL A +
Sbjct: 213 DAIGLAFQVRDDILDIEGNTVEIGKTVGADLNLDKSTYPKMLGLDGAKSKAQELYQSAVK 272
Query: 269 EL--AYFDPTRAAPLDHLVNFIVSFGN 293
L FD T L L FI+ N
Sbjct: 273 NLNEISFDTT---ALRALAEFIIHRKN 296
>gi|421496516|ref|ZP_15943744.1| ispA [Aeromonas media WS]
gi|407184504|gb|EKE58333.1| ispA [Aeromonas media WS]
Length = 296
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 162/292 (55%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++++ L ++I++ L EA+P P L +AM+Y L GGKR+ L A EM+G
Sbjct: 3 LDDFSRLHRRRIDDCLSAQLEALPAMAPR-LRDAMKYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KSELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG+ +SL+EL +HRHK
Sbjct: 122 FSILADHPLPDALLANRVRMLSALARASGYLGMCGGQALDLEAEGRRISLAELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + E + ++ + +G+A+Q+ +DI+D+ G + + + G
Sbjct: 182 TGALIECAVTLGALCKADVEPATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ ++K+TYP L+G+D +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLAQEKSTYPALLGLDPARELARELHDKALTALQSL-PYNTDILEAFADYII 292
>gi|304415488|ref|ZP_07396128.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
gi|304282658|gb|EFL91181.1| geranyltranstransferase [Candidatus Regiella insecticola LSR1]
Length = 313
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 154/263 (58%), Gaps = 17/263 (6%)
Query: 22 LKAKQINEALDEAV-PLP-HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMS 78
L ++++E L + PLP H L EA+RY+ L GGKR+ L A+ +M G S
Sbjct: 16 LYQRRVDEKLKNFIQPLPSHSRQLIEAIRYTVLCGGKRIRPYLVYATGKMFGLSPGSLDV 75
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII 138
A A+E + +++ DDLP +D+D+LRRG+PS H FGEA AILA AL LA +A
Sbjct: 76 AAAAVECIHAYSLVHDDLPAMDDDNLRRGQPSCHIKFGEAIAILAGDALQTLAFSLLADQ 135
Query: 139 KAKNIN------------SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
N+ A+G+ G+ AGQ +D+ +E ++SL+ L IHRHKTG I A
Sbjct: 136 PMPNVTLENRLKIVSELAKAIGAGGMCAGQALDLAAEHCQISLASLEKIHRHKTGALIRA 195
Query: 187 SIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKA 244
++ G + G +E+ + + ++ +G+A+Q+ +DI+D+ G + M ++ G D R+K+
Sbjct: 196 AVRIGALAAGERSEKTLSLLDDYADAIGLAFQVQDDILDITGETDRMGKQQGADQQRNKS 255
Query: 245 TYPKLVGIDGSKKHAKELIAEAK 267
TY L+G++G+K AK+ +A+
Sbjct: 256 TYSSLLGLEGAKIKAKKFCQDAQ 278
>gi|297584556|ref|YP_003700336.1| polyprenyl synthetase [Bacillus selenitireducens MLS10]
gi|297143013|gb|ADH99770.1| Polyprenyl synthetase [Bacillus selenitireducens MLS10]
Length = 297
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 156/270 (57%), Gaps = 22/270 (8%)
Query: 36 PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PL P IL E+M YSL GGKR+ L ++ G A A+EL+ T ++I D
Sbjct: 28 PLKSPDILKESMLYSLNAGGKRIRPVLLLSVLHAAGKPLEAGYRTAAALELIHTYSLIHD 87
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQAL------------HCLAMQHIAIIKAKN 142
DLP +D+DDLRRGKP+NHKV+GE AILA L H A +A+I +
Sbjct: 88 DLPAMDDDDLRRGKPTNHKVYGEDIAILAGDGLLTHSFNLISKDEHLSADLKVALIA--D 145
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
I A G EG+ GQ+ D+ EGKE++ EL IH KTG + S+++G I G NEE+
Sbjct: 146 ITDAAGPEGMVGGQVSDMQGEGKELTAEELEAIHHRKTGDLLSVSLMAGGKIAGLNEEDN 205
Query: 203 ERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKE 261
+ + GK++G+A+Q+ +D++D+ G+ E+ + G D DK TYP L+G+DG+KK
Sbjct: 206 KYLSLLGKHLGLAFQIKDDLLDIEGTVEEIGKPVGSDAGNDKNTYPSLLGLDGAKKKLDI 265
Query: 262 LIAEAK---QELAYFDPTRAAPLDHLVNFI 288
+ EA+ Q + +F+P LD L+ +I
Sbjct: 266 HLNEARMNLQRIRHFNPV---VLDGLITYI 292
>gi|261492167|ref|ZP_05988738.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495736|ref|ZP_05992178.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261308591|gb|EEY09852.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312240|gb|EEY13372.1| geranyltranstransferase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 297
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 149/265 (56%), Gaps = 15/265 (5%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAM Y+ L GGKR+ L A+ M+G A A+E + +++ DDLP +D+
Sbjct: 34 LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D LRRGKP+ H F EATAILA AL A + +A + + + +A G++G
Sbjct: 94 DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVAQVTELATASGAKG 153
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG--GGNEEEIERMRNFG 209
+ GQ +D+ +E K VSL EL IHR+KTG I +S++ G+ + N + + N+
Sbjct: 154 MCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEHSQNLAIKQPLVNYA 213
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
K +G+A+Q+ +DI+DVIG + KT G D +K+TYPKL+G+DG+K+ A+ L A
Sbjct: 214 KAIGLAFQVQDDILDVIGDTDKIGKTVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALH 273
Query: 269 ELAYFDPTRAAPLDHLVNFIVSFGN 293
L P L L NFIV N
Sbjct: 274 SLEQL-PFDTTALKELANFIVKREN 297
>gi|320157198|ref|YP_004189577.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e [Vibrio vulnificus MO6-24/O]
gi|319932510|gb|ADV87374.1| octaprenyl-diphosphate synthase / dimethylallyltransferase /
geranyltranstransferase (farnesyldiphosphate synthase) /
geranylgeranyl pyrophosphate synthetase [Vibrio
vulnificus MO6-24/O]
Length = 294
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 162/304 (53%), Gaps = 30/304 (9%)
Query: 8 DTLPKFFQVNEYKALKAKQINEALDEAVPLPHP-AILHEAMRYSLP-GGKRLMSTLCIAS 65
D L F Q N +Q+N LD+ LPH L +AMRY L GGKR L A+
Sbjct: 3 DVLASFQQRNN------QQLNLWLDK---LPHQNQALIQAMRYGLVLGGKRARPFLVYAT 53
Query: 66 CEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQ 125
EM+G SQ + A AIE + ++I DDLP +D+D+LRRG+P+ H F EATAIL
Sbjct: 54 GEMLGCSQEQLDTPASAIECIHAYSLIHDDLPAMDDDELRRGQPTCHVKFDEATAILTGD 113
Query: 126 ALHCLAM--------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSE 171
AL LA Q +A+I+A + A G++G+ GQ +D+ +E + V+L E
Sbjct: 114 ALQTLAFTILAEGTLSPDGETQRVAMIQA--LAQASGAQGMCIGQALDLAAENRAVTLEE 171
Query: 172 LNFIHRHKTGKFIEASIVSGVIIGGGNEEEI-ERMRNFGKYVGMAYQLWNDIVDVIGSPE 230
L IHR+KTG I ++ G + G I ++ + +G+A+Q+ +DI+D+I E
Sbjct: 172 LEEIHRNKTGALIRCAVRLGALAAGEKGLAILPQLEKYSTAIGLAFQVQDDILDIISDTE 231
Query: 231 MREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K G D +K+TYP L+G++G+ + A L+ EA Q L P L+ ++V
Sbjct: 232 TLGKPQGSDQELNKSTYPSLLGLEGAMEKAHTLLHEALQALEAI-PYNTQHLEEFARYVV 290
Query: 290 SFGN 293
N
Sbjct: 291 ERKN 294
>gi|239814577|ref|YP_002943487.1| polyprenyl synthetase [Variovorax paradoxus S110]
gi|239801154|gb|ACS18221.1| Polyprenyl synthetase [Variovorax paradoxus S110]
Length = 305
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 159/278 (57%), Gaps = 14/278 (5%)
Query: 26 QINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIE 84
++ AL V + P +L +AMRY+ L GGKRL L +A+ E +GG+ + A+ ACA E
Sbjct: 24 RVEAALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNAAAALRAACATE 83
Query: 85 LLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------A 136
L+ +++ DDLP +DND LRRGKP+ H FGEA A+LA AL LA + + A
Sbjct: 84 LIHAYSLVHDDLPSMDNDVLRRGKPTVHVKFGEADALLAGDALQALAFELLTPEGDEIPA 143
Query: 137 IIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-V 192
I+A + + A GS+G+A GQ +D+ S G + ++L +HR KTG ++ S+ G
Sbjct: 144 SIQAALCRLLARAAGSQGMAGGQAIDLASVGLALDEAQLREMHRLKTGALLQGSVEMGAA 203
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVG 251
G + +R++G +G+A+Q+ +DI+DV + KT G+D DK TY L G
Sbjct: 204 CAGAVAPAALSALRDYGAAIGLAFQVVDDILDVTADSQTLGKTAGKDAAADKPTYVSLWG 263
Query: 252 IDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+DG++ A++L+AE+ L A L L + +V
Sbjct: 264 LDGARAQARQLLAESLAALDRSGLADTAALRALAHMVV 301
>gi|149377246|ref|ZP_01894993.1| geranyltranstransferase [Marinobacter algicola DG893]
gi|149358434|gb|EDM46909.1| geranyltranstransferase [Marinobacter algicola DG893]
Length = 299
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 147/249 (59%), Gaps = 23/249 (9%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AMRYS L GGKR+ LC+A+ +G + A+ AC++EL+ ++I DDLP +DN
Sbjct: 37 LQQAMRYSVLGGGKRIRPALCLAAATALGQPRESAIVPACSLELIHAYSLIHDDLPAMDN 96
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
DDLRRG+ + H F EATAILA AL LA +A + + + +A G +G
Sbjct: 97 DDLRRGRATTHIAFDEATAILAGDALQTLAFGWLAEAPGVDDQVRLAMIRELATASGHQG 156
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGK 210
+A GQ +D+ S GK++++ +L +HRHKTG I AS+ G + NE+++ + + +
Sbjct: 157 MAGGQAIDLESVGKQLTVEQLENMHRHKTGALIAASVRMGALTATDVNEDQLAALTVYSQ 216
Query: 211 YVGMAYQLWNDIVD------VIGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+G+A+Q+ +D++D VIG P+ G D+ R K TYP L+G DG++ + +L+
Sbjct: 217 TLGLAFQVQDDLLDIEGDTTVIGKPQ-----GSDLARSKPTYPSLMGADGARNYLSQLLE 271
Query: 265 EAKQELAYF 273
A + F
Sbjct: 272 SALASIEMF 280
>gi|350266625|ref|YP_004877932.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599512|gb|AEP87300.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 296
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 153/246 (62%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L E+M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKESMLYSLETGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHLSDEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + S+++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFSVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F +++G+ +Q+ +DI+D+ GS E + ++ G D +K+TYP L+ ++G+K
Sbjct: 207 TLRTFSRHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 IKEAKR 272
>gi|254361652|ref|ZP_04977790.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|452744962|ref|ZP_21944801.1| geranyltranstransferase [Mannheimia haemolytica serotype 6 str.
H23]
gi|153093170|gb|EDN74186.1| geranyltranstransferase [Mannheimia haemolytica PHL213]
gi|452087017|gb|EME03401.1| geranyltranstransferase [Mannheimia haemolytica serotype 6 str.
H23]
Length = 297
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 149/265 (56%), Gaps = 15/265 (5%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L EAM Y+ L GGKR+ L A+ M+G A A+E + +++ DDLP +D+
Sbjct: 34 LVEAMAYAVLLGGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDD 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D LRRGKP+ H F EATAILA AL A + +A +++ + +A G++G
Sbjct: 94 DRLRRGKPTCHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKG 153
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIG--GGNEEEIERMRNFG 209
+ GQ +D+ +E K VSL EL IHR+KTG I +S++ G+ + N + + N+
Sbjct: 154 MCLGQSLDLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYA 213
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
K +G+A+Q+ +DI+DVIG + K G D +K+TYPKL+G+DG+K+ A+ L A
Sbjct: 214 KAIGLAFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALH 273
Query: 269 ELAYFDPTRAAPLDHLVNFIVSFGN 293
L P L L NFIV N
Sbjct: 274 SLEQL-PFDTTALKELANFIVKREN 297
>gi|51892982|ref|YP_075673.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
gi|51856671|dbj|BAD40829.1| geranylgeranyl pyrophosphate synthase [Symbiobacterium thermophilum
IAM 14863]
Length = 297
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 160/278 (57%), Gaps = 22/278 (7%)
Query: 15 QVNEYKALKAKQINEALDE-AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ +Y A + +Q+ ALD L P+ L EAMRYS L GGKRL L IA+ E+ G
Sbjct: 4 EFQQYMAARRQQVEAALDRYTAGLDAPSRLVEAMRYSLLAGGKRLRPILTIAASELFGLE 63
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ M ACA+E++ T ++I DDLPC+D+DDLRRG+P+ HKV+GEA A+LA AL
Sbjct: 64 AADVMPGACALEMIHTYSLIHDDLPCMDDDDLRRGRPTCHKVYGEAMAVLAGDALLT--- 120
Query: 133 QHIAIIKAKNINSAVG----------------SEGIAAGQIMDINSEGKEVSLSELNFIH 176
Q A++ + VG +EG+ GQ+ D+ EG++ +L IH
Sbjct: 121 QAFALMAEQAAVPRVGPARAVRAAAELAHAAGAEGMVGGQVEDLAWEGRQADEPQLRRIH 180
Query: 177 RHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-T 235
KTG A++ G I+ G EE+++R+ + + G+A+Q+W+D++DV G + K
Sbjct: 181 SLKTGALFRAAVRMGGILAGAGEEDLDRLGRYATHFGLAFQIWDDVLDVTGDAALTGKGV 240
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYF 273
GRD DK+TY L G++G+++ A + + A +EL F
Sbjct: 241 GRDARLDKSTYVTLHGVEGARERAYQAVRLALEELEPF 278
>gi|424763036|ref|ZP_18190515.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|431031551|ref|ZP_19490725.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|431758395|ref|ZP_19547022.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
gi|402423503|gb|EJV55716.1| geranyltranstransferase [Enterococcus faecium TX1337RF]
gi|430564961|gb|ELB04136.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1590]
gi|430617453|gb|ELB54326.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E3083]
Length = 296
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L + + V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLTAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + GS+G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGSQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGELKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK-------HAKELI 263
+G+A+Q+ +D++DVIG+ + KT G+D +K TYP+L+G++ +++ A ++I
Sbjct: 211 LGLAFQIRDDLLDVIGTTKTLGKTAGKDERMEKNTYPRLLGLEKTREALEIELLSANKII 270
Query: 264 AEAKQELAYFD 274
+ ++++ FD
Sbjct: 271 DKLEEDVFSFD 281
>gi|311069029|ref|YP_003973952.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|419820327|ref|ZP_14343938.1| geranyltranstransferase [Bacillus atrophaeus C89]
gi|310869546|gb|ADP33021.1| geranyltranstransferase [Bacillus atrophaeus 1942]
gi|388475479|gb|EIM12191.1| geranyltranstransferase [Bacillus atrophaeus C89]
Length = 296
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 157/259 (60%), Gaps = 23/259 (8%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LNMPDSLKKSMLYSLEAGGKRLRPVVVLAILHAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNIN----------- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L + + I +++++
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSEDVSADKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQI D+ +E K VSL EL IH KT K + S+++G I+ E EIE
Sbjct: 147 ISAAGTEGMVGGQIADMEAESKSVSLEELESIHERKTAKLLAFSVMAGAILADAPENEIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSK------ 256
+R F ++G+ +Q+ +DI+D+ G+ E + ++ G D DK+TYP L+ +DG+K
Sbjct: 207 TLRAFSSHIGIGFQIRDDILDLEGNEEKIGKRVGSDTTNDKSTYPSLLSLDGAKNKLADH 266
Query: 257 -KHAKELIA--EAKQELAY 272
K AK+LI+ ++EL Y
Sbjct: 267 MKAAKDLISGLSLQKELLY 285
>gi|395232637|ref|ZP_10410887.1| geranyltranstransferase [Enterobacter sp. Ag1]
gi|394733039|gb|EJF32678.1| geranyltranstransferase [Enterobacter sp. Ag1]
Length = 299
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 157/283 (55%), Gaps = 19/283 (6%)
Query: 26 QINEALDEAV-PLP-HPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++N+A+ + PLP + L EAM Y +L GGKRL L A+ EM G + + A A
Sbjct: 13 RVNDAIARFLAPLPFQNSPLVEAMHYGALLGGKRLRPFLVYATGEMFGVADEALDAPAAA 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
+E + ++I DDLP +DNDDLRRG+P+ H FGE AILA AL LA ++
Sbjct: 73 VECIHAYSLIHDDLPAMDNDDLRRGQPTCHIKFGEENAILAGDALQTLAFSILSDAPMPG 132
Query: 137 ------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ + +A G G+ GQ +D+ +EGK+V L+ L IHRHKTG I A++
Sbjct: 133 VDIADRLAMVSELATASGVAGMCGGQALDLEAEGKQVDLASLERIHRHKTGALIRAAVRL 192
Query: 191 GVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPK 248
G + G + + + + +G+A+Q+ +DI+DV+G + + ++ G D K+TYP
Sbjct: 193 GTLSAGEAGRKALPILDRYAASIGLAFQVQDDILDVVGDTATIGKRQGADQQLGKSTYPA 252
Query: 249 LVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIV 289
L+G++ ++ A++L EA Q LA L+ L N+I+
Sbjct: 253 LLGLEQAQAKAQDLYQEALQALAELAELSLDTVALEALANYII 295
>gi|282855621|ref|ZP_06264935.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
gi|282586551|gb|EFB91805.1| geranyltranstransferase [Pyramidobacter piscolens W5455]
Length = 297
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 144/268 (53%), Gaps = 21/268 (7%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L EAM YSL GGKRL LC+A E++G + MA A E+ T ++I DDLPC
Sbjct: 30 PARLREAMNYSLLAGGKRLRPILCMAGAEIMGEKAESVLPMATAFEMAHTASLIHDDLPC 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN-------------INS 145
+DND LRRGKP+NH V+GE+ A+LA AL A + KN
Sbjct: 90 MDNDSLRRGKPTNHVVYGESLALLAGDALFLDAFETALAGLLKNGAEPQRCVRALALFAQ 149
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
A+G EGI GQ++D + + + + KT I AS+ +G I+ G + E + R+
Sbjct: 150 ALGPEGICGGQVLDTDRASQTDERDFVVDVASMKTMVLIRASLCAGAILAGADGEALRRL 209
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKK--HAKEL 262
+G+ VG+A+Q+ +D++D GS KT G+D +DK T+ + G+DG++ H K L
Sbjct: 210 MKYGENVGLAFQIADDLLDCTGSQSAMGKTLGKDEAQDKRTFVRAYGLDGARALLHEKTL 269
Query: 263 IAEAK----QELAYFDPTRAAPLDHLVN 286
AE + E F AA L+H N
Sbjct: 270 NAEKQLEPFAEKGAFLRALAAYLEHRSN 297
>gi|15602398|ref|NP_245470.1| hypothetical protein PM0533 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|421263266|ref|ZP_15714323.1| hypothetical protein KCU_02804 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|12720796|gb|AAK02617.1| IspA [Pasteurella multocida subsp. multocida str. Pm70]
gi|401689776|gb|EJS85153.1| hypothetical protein KCU_02804 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 295
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 19/267 (7%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L EAMRY L GGKR+ L A+ M+G + A ++E + ++I DDLP
Sbjct: 29 PSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPA 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSA 146
+D+D LRRG+P+ H F ATAILA AL A Q +A++ + ++ A
Sbjct: 89 MDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLALV--QTLSQA 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIER 204
G +G+ GQ +D+ SE K +SL EL IHR+KTG + A+I G I N+ ++
Sbjct: 147 AGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQ 206
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ + + +G+A+Q+ +DI+D+ G ++ KT G D++ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 207 LQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKLLGLAGAKQKAQELY 266
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P + L + F+V+
Sbjct: 267 QNAIAELESI-PFDTSALRAIAEFVVN 292
>gi|49086036|gb|AAT51323.1| PA4043, partial [synthetic construct]
Length = 296
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 163/296 (55%), Gaps = 18/296 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G E + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
+K TYP L+G++ +K +A EL A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRNG 296
>gi|378774240|ref|YP_005176483.1| geranyltranstransferase [Pasteurella multocida 36950]
gi|417855578|ref|ZP_12500682.1| hypothetical protein AAUPMG_03142 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425065319|ref|ZP_18468439.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida P1059]
gi|338215895|gb|EGP02111.1| hypothetical protein AAUPMG_03142 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|356596788|gb|AET15514.1| geranyltranstransferase [Pasteurella multocida 36950]
gi|404384183|gb|EJZ80626.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida P1059]
Length = 295
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 19/267 (7%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L EAMRY L GGKR+ L A+ M+G + A ++E + ++I DDLP
Sbjct: 29 PSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPA 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSA 146
+D+D LRRG+P+ H F ATAILA AL A Q +A++ + ++ A
Sbjct: 89 MDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLALV--QTLSQA 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIER 204
G +G+ GQ +D+ SE K +SL EL IHR+KTG + A+I G I N+ ++
Sbjct: 147 AGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQ 206
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ + + +G+A+Q+ +DI+D+ G ++ KT G D++ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 207 LQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKLLGLAGAKQKAQELY 266
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P + L + F+V+
Sbjct: 267 QSAIAELESI-PFDTSALRAIAEFVVN 292
>gi|262281218|ref|ZP_06059000.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
gi|262257449|gb|EEY76185.1| geranyltranstransferase [Acinetobacter calcoaceticus RUH2202]
Length = 303
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 154/257 (59%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQSNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------------AII 138
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + AI+
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 139 KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
+ A S + +GQ++D+ +EGK+++ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+I S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQTIGLAFQVLDDILDIISSTEALGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 IYAKELHDQAFEALAHF 284
>gi|398311372|ref|ZP_10514846.1| geranyltranstransferase [Bacillus mojavensis RO-H-1]
Length = 296
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 151/243 (62%), Gaps = 14/243 (5%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DDLPC
Sbjct: 30 PDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPC 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN---SA 146
+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N SA
Sbjct: 90 MDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNELISA 149
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
G+EG+ GQI D+ +E ++V+L EL IH KT K + +++G I+ EEEIE +R
Sbjct: 150 AGTEGMVGGQIADMEAENRQVTLEELESIHERKTAKLLGFGVIAGAILADAPEEEIETLR 209
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
F ++G+ +Q+ +DI+DV GS E + ++ G D +K+TYP L+ ++G+KK I E
Sbjct: 210 AFSSHIGIGFQIRDDILDVEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKKKLDGHIEE 269
Query: 266 AKQ 268
AK+
Sbjct: 270 AKR 272
>gi|294054659|ref|YP_003548317.1| polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293613992|gb|ADE54147.1| Polyprenyl synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 294
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 142/256 (55%), Gaps = 15/256 (5%)
Query: 25 KQINEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMAC 81
+++ +D +P HP LH AMRYS+ GGKRL L +A E+ Q ++ A
Sbjct: 14 QRVETGIDTLLPSEDTHPVRLHRAMRYSMEAGGKRLRPVLVLALSELADSGQD-PIAAAV 72
Query: 82 AIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ-------- 133
AIE L T +I DDLP LDN DLRRG+PS HK F E TA+LA AL A +
Sbjct: 73 AIECLHTYTLIHDDLPSLDNSDLRRGRPSCHKQFDEPTAVLAGDALLTFAFELLSREYAS 132
Query: 134 --HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG 191
+A+ +++ A GS + GQ DI++EGK V L +IH +KT + A++ G
Sbjct: 133 SPELAVGLIQDLADASGSRRLIGGQQEDIDNEGKPVDADTLQYIHENKTAALLTAALSMG 192
Query: 192 VIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLV 250
+ + ++ ++ G ++GM +Q+ +DI+D S E M + G D DK TY L
Sbjct: 193 LRFTQPGAQALQLIQKVGFHLGMTFQIVDDILDATSSAEAMGKPVGNDASADKTTYVALH 252
Query: 251 GIDGSKKHAKELIAEA 266
GI+G+++HAKE ++A
Sbjct: 253 GIEGAREHAKEHTSKA 268
>gi|425063220|ref|ZP_18466345.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida X73]
gi|404382783|gb|EJZ79240.1| Octaprenyl-diphosphate synthase [Pasteurella multocida subsp.
gallicida X73]
Length = 295
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 19/267 (7%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L EAMRY L GGKR+ L A+ M+G + A ++E + ++I DDLP
Sbjct: 29 PSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPA 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSA 146
+D+D LRRG+P+ H F ATAILA AL A Q +A++ + ++ A
Sbjct: 89 MDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFELLTQAPALQAEQKLALV--QTLSQA 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIER 204
G +G+ GQ +D+ SE K +SL EL IHR+KTG + A+I G I N+ ++
Sbjct: 147 AGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQ 206
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ + + +G+A+Q+ +DI+D+ G ++ KT G D++ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 207 LQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKLLGLAGAKQKAQELY 266
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P + L + F+V+
Sbjct: 267 QNAIAELESI-PFDTSALRAIAEFVVN 292
>gi|387813233|ref|YP_005428715.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338245|emb|CCG94292.1| geranyltranstransferase [Marinobacter hydrocarbonoclasticus ATCC
49840]
Length = 298
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 170/295 (57%), Gaps = 19/295 (6%)
Query: 12 KFFQVNEYKALKAKQINEALDEAVPLPHPA-ILHEAMRYS-LPGGKRLMSTLCIASCEMI 69
+ Q Y +Q++ LD + + L E MRYS L GGKR+ LC+A+ +
Sbjct: 4 RIRQAEAYLDQCRQQVDRELDRCLARHATSERLQETMRYSVLGGGKRVRPALCMAAARAM 63
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G +S A++ ACA+EL+ +++ DDLP +D+DDLRRG+P+ H F EA+AILA AL
Sbjct: 64 GSDESTALAPACALELIHAYSLVHDDLPAMDDDDLRRGRPTAHIAFDEASAILAGDALQT 123
Query: 130 LAM------------QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA Q + +I + A G +G+ GQ +D+ S G+++S+++L +HR
Sbjct: 124 LAFALLSDAPALSDRQRVTMI--SELARASGHQGMVGGQAIDLESVGRQLSVAQLEAMHR 181
Query: 178 HKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKT 235
HKTG IEAS+ G + E ++ + ++ +G+A+Q+ +D++D+ G E + ++
Sbjct: 182 HKTGALIEASVRLGALTSETVTECQLSNLTDYASALGLAFQVQDDLLDIEGDTEVIGKRQ 241
Query: 236 GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
G D R K TYP L+GI+G+++H L+ EA L FD + A L + +++V+
Sbjct: 242 GSDAARAKPTYPALLGIEGARQHLARLLDEALSALESFD-SEADTLRAMADYVVA 295
>gi|419801571|ref|ZP_14326795.1| polyprenyl synthetase [Haemophilus parainfluenzae HK262]
gi|419844764|ref|ZP_14368051.1| polyprenyl synthetase [Haemophilus parainfluenzae HK2019]
gi|385193487|gb|EIF40849.1| polyprenyl synthetase [Haemophilus parainfluenzae HK262]
gi|386416690|gb|EIJ31182.1| polyprenyl synthetase [Haemophilus parainfluenzae HK2019]
Length = 297
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 156/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
+ A L +AM+Y L GGKR+ L A+ +M+G S A AIE + ++I DDLP
Sbjct: 30 YNAPLRDAMKYGLLLGGKRVRPFLVYATGKMLGAETSALDYAAAAIEAIHAYSLIHDDLP 89
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINS 145
+DND+LRRG+P+ H F EATAILA AL A Q + ++K +
Sbjct: 90 AMDNDELRRGQPTCHIAFDEATAILAGDALQAFAFEILTQAPSLSAEQKLQLVKV--LAQ 147
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIE 203
A G +G+ GQ +D+ SE K+V+L+EL IHR+KTG + A++ G I N+E +
Sbjct: 148 ASGVQGMCLGQSLDLISEHKQVNLAELELIHRNKTGALLTAALKLGFICSPHFKNKELEK 207
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
++ + + +G+A+Q+ +DI+D+ G S E+ + G D+ DK+TYPKL+G++G+K+ A+EL
Sbjct: 208 QLERYSQAIGLAFQVQDDILDIEGDSAEIGKPVGSDLGLDKSTYPKLLGLEGAKQKAQEL 267
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FIV+
Sbjct: 268 YQTALHELDNL-PFDTTALRALAEFIVN 294
>gi|375135831|ref|YP_004996481.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
gi|325123276|gb|ADY82799.1| geranyltranstransferase [Acinetobacter calcoaceticus PHEA-2]
Length = 303
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 153/257 (59%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------------AII 138
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + AI+
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 139 KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
+ A S + +GQ++D+ +EGK+++ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ +K
Sbjct: 208 TDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAK 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 SYAKELHDQAFEALAHF 284
>gi|383310173|ref|YP_005362983.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. HN06]
gi|386834349|ref|YP_006239664.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. 3480]
gi|380871445|gb|AFF23812.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. HN06]
gi|385201050|gb|AFI45905.1| geranyltranstransferase [Pasteurella multocida subsp. multocida
str. 3480]
Length = 295
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 19/267 (7%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L EAMRY L GGKR+ L A+ M+G + A ++E + ++I DDLP
Sbjct: 29 PSPLAEAMRYGVLLGGKRIRPFLVYATGRMLGADLNQLDYAAASVEAVHAYSLIHDDLPA 88
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSA 146
+D+D LRRG+P+ H F ATAILA AL A Q +A++ + ++ A
Sbjct: 89 MDDDHLRRGQPTCHIAFDHATAILAGDALQAFAFEILTQAPALQAEQKLALV--QTLSQA 146
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIER 204
G +G+ GQ +D+ SE K +SL EL IHR+KTG + A+I G I N+ ++
Sbjct: 147 AGVKGMCLGQSLDLISEQKHISLIELEQIHRNKTGAMLSAAIQLGRICSPHFKNDTLAQQ 206
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
++ + + +G+A+Q+ +DI+D+ G ++ KT G D++ DK+TYPKL+G+ G+K+ A+EL
Sbjct: 207 LQRYSEAIGLAFQVQDDILDIEGESDIIGKTVGSDLLADKSTYPKLLGLAGAKQKAQELY 266
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P + L + F+V+
Sbjct: 267 QNAIAELESI-PFDTSALRAIAEFVVN 292
>gi|15599238|ref|NP_252732.1| geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|107103557|ref|ZP_01367475.1| hypothetical protein PaerPA_01004627 [Pseudomonas aeruginosa PACS2]
gi|218889676|ref|YP_002438540.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|386056964|ref|YP_005973486.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|392982230|ref|YP_006480817.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|418588459|ref|ZP_13152470.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592656|ref|ZP_13156522.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756862|ref|ZP_14283207.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|420137641|ref|ZP_14645606.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|421158077|ref|ZP_15617375.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
gi|421518592|ref|ZP_15965266.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|424939078|ref|ZP_18354841.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|9950239|gb|AAG07430.1|AE004821_3 geranyltranstransferase [Pseudomonas aeruginosa PAO1]
gi|218769899|emb|CAW25660.1| geranyltranstransferase [Pseudomonas aeruginosa LESB58]
gi|346055524|dbj|GAA15407.1| geranyltranstransferase [Pseudomonas aeruginosa NCMG1179]
gi|347303270|gb|AEO73384.1| geranyltranstransferase [Pseudomonas aeruginosa M18]
gi|375040746|gb|EHS33484.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375048528|gb|EHS41049.1| geranyltranstransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396617|gb|EIE43035.1| geranyltranstransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317735|gb|AFM63115.1| geranyltranstransferase [Pseudomonas aeruginosa DK2]
gi|403249617|gb|EJY63108.1| geranyltranstransferase [Pseudomonas aeruginosa CIG1]
gi|404348074|gb|EJZ74423.1| geranyltranstransferase [Pseudomonas aeruginosa PAO579]
gi|404550013|gb|EKA58821.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 25324]
Length = 295
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G E + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+K TYP L+G++ +K +A EL A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|421152012|ref|ZP_15611604.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
gi|404526144|gb|EKA36376.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 14886]
Length = 295
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVTLDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G E + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+K TYP L+G++ +K +A EL A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|416877744|ref|ZP_11919959.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
gi|334839219|gb|EGM17911.1| geranyltranstransferase [Pseudomonas aeruginosa 152504]
Length = 295
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/295 (36%), Positives = 163/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G E + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAEPATLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+K TYP L+G++ +K +A EL A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|225620225|ref|YP_002721482.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
gi|225215044|gb|ACN83778.1| geranylgeranyl pyrophosphate synthase [Brachyspira hyodysenteriae
WA1]
Length = 296
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 160/292 (54%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALDEA-----VPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+ EY ++ ++IN+ +D + L + I E ++Y L GGKRL L +CE+
Sbjct: 3 LKEYMNIRLEEINKTIDNVFDKSDIELENSFI--EMLKYPLDAGGKRLRPILTCLACELF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G ++ A A+EL+ T +++ DDLP +DNDDLRRGKP+ H +GEA AIL L
Sbjct: 61 NGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLT 120
Query: 130 LAMQHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A Q ++ K+ ++ A G G+ GQ +D+ E KE++ L +H KT
Sbjct: 121 HAFQLLSKTDVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKKT 180
Query: 181 GKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G I +I G I N+ +IE + +G+ +G+A+Q+ +DI+DVI E KT G+D
Sbjct: 181 GAMIRGAIRLGAISSENINDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKD 240
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAP-LDHLVNFIV 289
K TY K G++G+K+ AK++I ++ + L + + A L L N+I+
Sbjct: 241 EKEGKLTYVKQFGLEGAKEEAKKVIEKSIEYLKPYKESEAKNILIELANYII 292
>gi|120555348|ref|YP_959699.1| polyprenyl synthetase [Marinobacter aquaeolei VT8]
gi|120325197|gb|ABM19512.1| farnesyl-diphosphate synthase [Marinobacter aquaeolei VT8]
Length = 298
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 159/263 (60%), Gaps = 18/263 (6%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L E MRYS L GGKR+ LC+A+ +G +S A++ ACA+EL+ +++ DDLP +D+
Sbjct: 36 LQETMRYSVLGGGKRVRPALCMAAARAMGSDESTALAPACALELIHAYSLVHDDLPAMDD 95
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSAVGS 149
DDLRRG+P+ H F EA+AILA AL LA Q + +I + A G
Sbjct: 96 DDLRRGRPTAHIAFDEASAILAGDALQTLAFALLSDAPALSDRQRVTMI--SELARASGH 153
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNF 208
+G+ GQ +D+ S G+++S+++L +HRHKTG IEAS+ G + E ++ + ++
Sbjct: 154 QGMVGGQAIDLESVGQQLSVAQLETMHRHKTGALIEASVRLGALTSETVTECQLSNLTDY 213
Query: 209 GKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
+G+A+Q+ +D++D+ G E + ++ G D R K TYP L+GI+G+++H L+ EA
Sbjct: 214 ASALGLAFQVQDDLLDIEGDTEVIGKRQGSDAARAKPTYPALLGIEGARQHLARLLDEAL 273
Query: 268 QELAYFDPTRAAPLDHLVNFIVS 290
L FD + A L + +++V+
Sbjct: 274 SALESFD-SEADTLRAMADYVVA 295
>gi|398999014|ref|ZP_10701767.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM18]
gi|398132633|gb|EJM21895.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM18]
Length = 295
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 167/295 (56%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAV--PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IAAYSAASQARVNAALETLFNPPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGK 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLAF 121
Query: 133 QHI--AIIKAKNINSAV----------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ + A + + + G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSASDAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IE S+ G + G E +E++ ++++ + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEVSVKLGALASGQAERDELKSLQSYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAA-AEPLRDLARYIVDRRN 295
>gi|313894537|ref|ZP_07828101.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
gi|313440933|gb|EFR59361.1| geranyltranstransferase [Veillonella sp. oral taxon 158 str. F0412]
Length = 292
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 151/285 (52%), Gaps = 17/285 (5%)
Query: 18 EYKALKAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQS 74
EY A + I + L E + P+ L+E+M YSL GGKR+ L A EM+ +
Sbjct: 4 EYLAASKQNIEQWLGEVLTSPNQEFKPLYESMNYSLMQGGKRIRPILSKAVLEMLHKEPA 63
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
CA+E + T +++ DDLP +DNDD RRG +NHKV+GE AILA L A Q
Sbjct: 64 DYKEFLCAMECIHTYSLVHDDLPAMDNDDYRRGNLTNHKVYGEGLAILAGDGLLTYAFQL 123
Query: 135 IAIIKAKN----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFI 184
+ K + +A G EG+ GQ D+ SE K + L EL +HR KTG
Sbjct: 124 MTANKTATAQEKLDAIQCVATAAGPEGMVGGQAFDMLSENKHIPLEELQVLHRGKTGALF 183
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
AS+ G+I+G + + + +G+ +Q+ +DI+DV G+ E KT G D+ + K
Sbjct: 184 NASVELGLILGNADTATRTALMKYANCLGLLFQITDDILDVTGTIEELGKTPGSDIRQHK 243
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQEL---AYFDPTRAAPLDHLV 285
+TY L+G++G+K+ A + +A L +Y AA +D+L+
Sbjct: 244 STYVSLLGLEGAKEQAASVGKQAHNALNSVSYDTSILAALIDYLL 288
>gi|325276613|ref|ZP_08142352.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
gi|324098253|gb|EGB96360.1| polyprenyl synthetase [Pseudomonas sp. TJI-51]
Length = 295
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/297 (35%), Positives = 169/297 (56%), Gaps = 22/297 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++++ AL+ P + L+ AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IGSYQASCQRRVDAALEPLFVAPTKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 Q--------------HIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
+A+++A + +A G G+ GQ +D+ S G ++ L F+HRH
Sbjct: 122 SALLDPHLSPQADSVRLAMVQA--LATAAGPAGMVGGQAIDLGSVGLKLDQRALAFMHRH 179
Query: 179 KTGKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KTG IEAS+ G + +++++ ++ + + +G+A+Q+ +DI+DV G + + ++ G
Sbjct: 180 KTGALIEASVRLGALASARAGQQQLDALQTYAQAIGLAFQVQDDILDVEGDTATLGKRQG 239
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
D+ RDK TYP L+G+D +K +A EL +A L F +A PL L +IV N
Sbjct: 240 ADIARDKPTYPALLGLDAAKAYAIELRDQALVALEGFG-EKAEPLRALARYIVERRN 295
>gi|240948732|ref|ZP_04753104.1| geranyltranstransferase [Actinobacillus minor NM305]
gi|240296948|gb|EER47526.1| geranyltranstransferase [Actinobacillus minor NM305]
Length = 299
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 155/267 (58%), Gaps = 19/267 (7%)
Query: 39 HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H + L +AM Y+ L GGKR+ L A+ M+G S A A+E + +++ DDLP
Sbjct: 32 HHSPLIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLKALDHSAAAMESIHAYSLVHDDLP 91
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-------IIKAKNINS---AV 147
+D+D LRRGKP+ H F EATAILA +L A + IA + K K I S A
Sbjct: 92 AMDDDKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPFLTDLQKIKQIQSLAKAA 151
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G++G+ GQ +D+ SE K +SLSEL IHR+KTG I AS++ G + ++ E+++N
Sbjct: 152 GAKGMCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYAQD--EKIKN 209
Query: 208 ----FGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ K +G+A+Q+ +DI+DVIG + KT G D +K+TYPKL+G++G+ + A+ L
Sbjct: 210 ALECYAKAIGLAFQVQDDILDVIGDTDKIGKTAGSDESLNKSTYPKLLGLEGAMEKAQSL 269
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIV 289
A + L P L L +FI+
Sbjct: 270 YQTALKALDEL-PFDTRALKALAHFII 295
>gi|291519198|emb|CBK74419.1| Geranylgeranyl pyrophosphate synthase [Butyrivibrio fibrisolvens
16/4]
Length = 305
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 149/263 (56%), Gaps = 17/263 (6%)
Query: 43 LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
+ +AM+YS+ GGKRL L + + GG V AIEL+ T +++ DDLP +DN
Sbjct: 40 IFDAMQYSVTAGGKRLRPILMNETFTLFGGEGDVIEPFMAAIELIHTYSLVHDDLPAMDN 99
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQ-----HIAIIKAKNINSAV-------GS 149
D LRRGKP+ H V+GEA +LA AL A + + A I + A+ G
Sbjct: 100 DSLRRGKPTTHAVYGEAMGVLAGDALLNYAFETALNAYDADIDTVRVTEAMRILARKAGV 159
Query: 150 EGIAAGQIMDINSEGKEVSLS--ELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G+ GQ++D+ SE K++ ++ +++FI+ KTG IEA+++ G ++ G E+++ + N
Sbjct: 160 FGMIGGQVVDVESEKKQLEMTKEKIDFIYELKTGALIEAAMMIGAVLAGATEQQVTTVEN 219
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
K +G+A+Q+ +DI+DVIG K G D +K T+ GI+ SK+ K L EA
Sbjct: 220 VAKKIGLAFQIQDDILDVIGDEATIGKPIGSDERNEKCTFVTFAGIEKSKEEVKRLTDEA 279
Query: 267 KQELAYFDPTRAAPLDHLVNFIV 289
+EL P + L+ L+N++V
Sbjct: 280 IEELNSL-PYKNEFLNELLNYLV 301
>gi|407716696|ref|YP_006837976.1| polyprenyl synthetase [Cycloclasticus sp. P1]
gi|407257032|gb|AFT67473.1| Polyprenyl synthetase [Cycloclasticus sp. P1]
Length = 294
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 166/287 (57%), Gaps = 15/287 (5%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQS 74
++++ K +QI AL +P H P LHEAMRYS L GGKR+ + L A+ ++ Q
Sbjct: 6 DFQSAKTQQIETALARYLPASHIEPKRLHEAMRYSTLNGGKRIRAMLVYATGNLLEIQQP 65
Query: 75 VAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
+ S+A +IEL+ ++I DDLP +D+DDLRRGKPS HK F EATAIL AL LA
Sbjct: 66 ILDSIASSIELIHAYSLIHDDLPSMDDDDLRRGKPSCHKAFDEATAILTGDALLTLAFNV 125
Query: 135 IAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+A N ++ A GS G+ GQ +D+ +EGK +S++E+ +H HKTG I
Sbjct: 126 LAKADCSNEQKITCIQLLSQAAGSRGMVGGQAIDLANEGKSISIAEIENMHLHKTGALIC 185
Query: 186 ASI-VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDK 243
+ I + + + + ++++ + +G+A+Q+ +DI+D S KT G+D +K
Sbjct: 186 SCITLVASLKFQTTDSQYRHLKHYAECIGLAFQVQDDILDETSSTSTLGKTQGKDRQAEK 245
Query: 244 ATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
+TYP ++G+ SK K+L EA Q L+ FD RA L + F +S
Sbjct: 246 STYPSILGLRASKHLTKDLYDEAIQSLSNFDH-RANYLRDIAQFTIS 291
>gi|82701369|ref|YP_410935.1| polyprenyl synthetase [Nitrosospira multiformis ATCC 25196]
gi|82409434|gb|ABB73543.1| farnesyl-diphosphate synthase [Nitrosospira multiformis ATCC 25196]
Length = 297
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 150/264 (56%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LHEAMRY+ L GGKR+ L A+ E+ ++ A A+EL+ +++ DDLPC
Sbjct: 31 PERLHEAMRYTVLGGGKRVRPLLAFAAGELNKANEERVTIAAIAVELIHVYSLVHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAV 147
+D+D LRRGKP+ H +GEA A+L +L LA Q +A + + + A
Sbjct: 91 MDDDVLRRGKPTCHIEYGEAIALLTGDSLQSLAFQLLAEYSLADTPKMQLEMIRRLAQAA 150
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ +D+ S G+ +SL EL F+H HKTG I A+++ G G +E ++ +
Sbjct: 151 GSRGMAGGQAVDLASVGRTLSLPELEFMHIHKTGALIRAAVMLGAYCGSRLDEAQLAALD 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+F K +G+A+Q+ +D++D + KT G+D +K TY ++G +++ A+EL E
Sbjct: 211 HFAKCIGLAFQVVDDVLDAEATTAALGKTAGKDAENNKPTYVSILGSKRARELAEELRRE 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A L F+ A L + +FI+
Sbjct: 271 AYASLEMFEAA-AGRLRQVTDFII 293
>gi|399006274|ref|ZP_10708801.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM17]
gi|398122440|gb|EJM12032.1| geranylgeranyl pyrophosphate synthase [Pseudomonas sp. GM17]
Length = 295
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/291 (37%), Positives = 168/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P A L++AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IAAYQASSQARVNAALETLFHAPSPELARLYQAMRYSVMNGGKRVRPLLAYAACEALGAR 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN---SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ A I+ + ++ A G G+ GQ +D+ S G ++ L ++HRHKT
Sbjct: 122 SALLDPRLSDSSAEIRLRMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV E + ++ G D
Sbjct: 182 GALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTETLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G++ +K +A EL +A L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAD-AEPLRELARYIV 291
>gi|386390595|ref|ZP_10075380.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
gi|385692812|gb|EIG23482.1| polyprenyl synthetase [Haemophilus paraphrohaemolyticus HK411]
Length = 297
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 162/270 (60%), Gaps = 21/270 (7%)
Query: 41 AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCL 99
A L +AM Y+ L GGKR+ L A+ M+G + + A A+E + +++ DDLP +
Sbjct: 32 APLADAMAYAVLLGGKRVRPFLMYATGRMLGVHLAKIDASAGAMESIHAYSLVHDDLPAM 91
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGS 149
D+D LRRGKP+ H F EATAILA AL A + IA I + +++ A G+
Sbjct: 92 DDDALRRGKPTCHIAFDEATAILAGDALQSFAFELIADDELLTPLQKIRQIQSLAKAAGA 151
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEE-IE-RMRN 207
+G+ GQ +D+ +E K VSL EL IHR+KTG IEAS++ G + E++ IE +++
Sbjct: 152 KGMCLGQNLDLLAENKAVSLEELELIHRNKTGALIEASVLMGFNLSDYAEDKYIEMQLQR 211
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIA-- 264
+ + +G+A+Q+ +DI+DVIG + KT G D +K+TYPKL+G++G+++ A++L
Sbjct: 212 YAQAIGLAFQVQDDILDVIGETDKIGKTAGADEQHNKSTYPKLLGLEGAQQKAQKLYQVA 271
Query: 265 -EAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+A EL FD T L L +FI+ N
Sbjct: 272 IDALNELN-FDTT---ALKELADFIIHREN 297
>gi|385832565|ref|YP_005870340.1| farnesyl diphosphate synthase [Lactococcus garvieae Lg2]
gi|343181718|dbj|BAK60056.1| farnesyl diphosphate synthase [Lactococcus garvieae Lg2]
Length = 283
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 12/244 (4%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLP 97
P L +A+ YSL GGKR+ L + E +G + A +A +E++ ++I DDLP
Sbjct: 22 PQHLADAVTYSLAAGGKRIRPLLFLKMLESLGVTLETAHYQVAATVEMIHACSLIHDDLP 81
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALH--------CLAMQHIAIIK-AKNINSAVG 148
+DNDD RRG+ +NHK F EATAILA AL L++ ++ K ++ A G
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPYYLLATLSLPAATVVSLVKELSFASG 141
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
S G+ AGQI+D+ EGK +SL ++ IH KTG+ + V+ II +EE I ++R
Sbjct: 142 SLGMVAGQILDMEGEGKNLSLEQVKEIHHLKTGRMLTFPFVAAGIIAEQSEEVIAKLREI 201
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ +G+A+Q+ +DI+DV G+ E KT G+D +K+TY L+G+ G+++ +EL+ K
Sbjct: 202 GQNLGLAFQIRDDIIDVTGTFEEIGKTPGKDQAEEKSTYVALLGLKGAQEALEELLTAVK 261
Query: 268 QELA 271
+LA
Sbjct: 262 SDLA 265
>gi|337746949|ref|YP_004641111.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
gi|336298138|gb|AEI41241.1| polyprenyl synthetase [Paenibacillus mucilaginosus KNP414]
Length = 301
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 23/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY A A +I + L ++P P L E++ YSL GGKRL L +A+ E + G
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGR 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM A A+E++ T ++I DDLP +DNDD RRGK +NHKV+GEA AILA AL A
Sbjct: 67 AEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAF 126
Query: 133 QHIAIIKAKN--------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
H A+ A+ + G+ G+ GQ D+ E L EL +IH H
Sbjct: 127 -HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGR 237
KT I S+ +G I G +++ + FG +G+A+Q+ +DI+D+IG + + +
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSTQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL---AYFDPTRAAPL-DHLVN 286
D+ + K TYP +GI+ S+ EL AEAK + + +P R L D+L+
Sbjct: 246 DVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMK 298
>gi|386759023|ref|YP_006232239.1| geranyltranstransferase [Bacillus sp. JS]
gi|384932305|gb|AFI28983.1| geranyltranstransferase [Bacillus sp. JS]
Length = 296
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 152/246 (61%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEQDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + +++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F ++G+ +Q+ +DI+D+ GS E + ++ G D DK+TYP L+ ++G+K+
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKRKLDAH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 IKEAKR 272
>gi|365873737|ref|ZP_09413270.1| geranylgeranyl pyrophosphate synthase [Thermanaerovibrio velox DSM
12556]
gi|363983824|gb|EHM10031.1| geranylgeranyl pyrophosphate synthase [Thermanaerovibrio velox DSM
12556]
Length = 304
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 156/260 (60%), Gaps = 24/260 (9%)
Query: 29 EALDEAVPLPHPAILHEAMRYSLPGG-KRLMSTLCIASCEMIGGSQSVAMSMACAIELLV 87
+A++ ++P P L +M YSL GG KRL LC+A+ E G S+ M MA A E++
Sbjct: 32 KAINSSLPSDMPNRLWSSMDYSLSGGGKRLRPILCMATAEAFGVSRKDVMPMALAYEMVH 91
Query: 88 TMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH------------- 134
T ++I DDLPC+DNDD+RRG+P+NHK +GEA A+LA AL A Q+
Sbjct: 92 TASLIHDDLPCMDNDDMRRGRPTNHKAYGEALALLAGDALLAWAFQYAIDGLRENRFPSD 151
Query: 135 IAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR------HKTGKFIEASI 188
+ + ++ A G EGI GQ MD+ G E+ ++ L+ + R +KTG I +++
Sbjct: 152 LILAAVLSLARATGPEGICGGQSMDM---GFELEVNNLDPVDRVLRVATYKTGVLISSAL 208
Query: 189 VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYP 247
SG I+ NEE++ +++N+G +G+A+Q+ +DI+DVIG E KT G+D + K T+
Sbjct: 209 ESGAILANANEEDLLKLKNYGISLGVAFQVADDILDVIGKSEDLGKTAGKDQAQGKTTFV 268
Query: 248 KLVGIDGSKKHAKELIAEAK 267
+ GIDG+++ +L +AK
Sbjct: 269 SVHGIDGARRILADLSDKAK 288
>gi|451343479|ref|ZP_21912551.1| hypothetical protein HMPREF9943_00776 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337842|gb|EMD16998.1| hypothetical protein HMPREF9943_00776 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 279
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 13/255 (5%)
Query: 27 INEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIEL 85
IN+ L E + + EAM YS + GGKRL +L + + G + +ACAIE+
Sbjct: 5 INKRLYEILSQLKEGKVKEAMIYSTMSGGKRLRGSLLLTALHAYGIKYDEYLDIACAIEM 64
Query: 86 LVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ---------HIA 136
+ T ++I DDLP +DNDDLRRGKPS HK F EATAILA L +M H+
Sbjct: 65 IHTYSLIHDDLPAMDNDDLRRGKPSCHKQFDEATAILAGDGLLNESMNVIAGLDVEDHLK 124
Query: 137 IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG 196
I K + +A G G+ GQ DI E K LSEL IH +KTG I A + II
Sbjct: 125 IEIIKLLFNASGMNGMIYGQQQDIYFENKSADLSELENIHHYKTGCLIAAPLQIASII-- 182
Query: 197 GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGS 255
+E+ + M + G ++G+A+Q+ +DI+DVI +P E+ + TG D K+TY +GI+ S
Sbjct: 183 AKQEDFKPMTDLGFHLGLAFQIQDDILDVISNPNELGKNTGSDATNHKSTYVTFLGIEKS 242
Query: 256 KKHAKELIAEAKQEL 270
+K+ EL + +++
Sbjct: 243 QKYITELFNKCLEDI 257
>gi|325983215|ref|YP_004295617.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
gi|325532734|gb|ADZ27455.1| Geranyltranstransferase [Nitrosomonas sp. AL212]
Length = 297
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 152/264 (57%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LH+AMRYS L GGKR+ L A+ E++ +A A+EL+ +++ DDLPC
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELVAADLERVTVVAAAVELIHAYSLVHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS-----------AV 147
+D+D LRRGKP+ H + EATA+L +L LA + +A +I A
Sbjct: 91 MDDDILRRGKPTCHVEYDEATALLTGDSLQTLAFELLAEKPLADIPETQLQMIAQLALAS 150
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ D++S GK +SL EL F+H HKTG I A+++ G N+E++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKMLSLPELEFMHIHKTGALIRAAVMLGARCSSCLNDEQLAQLD 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+F K VG+A+Q+ +D++D + KT G+D +K TY ++G+ +++ A++L +
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAEHNKPTYVSILGVSQARELAEKLQHD 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A Q L F+ A L + +FI+
Sbjct: 271 AYQALDGFNEA-ALRLRQVTDFII 293
>gi|389872690|ref|YP_006380109.1| geranyltranstransferase [Advenella kashmirensis WT001]
gi|388537939|gb|AFK63127.1| geranyltranstransferase [Advenella kashmirensis WT001]
Length = 304
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 150/258 (58%), Gaps = 20/258 (7%)
Query: 25 KQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSM-- 79
++I +LD+A+P PA LH+AMRY+ L GKRL + L A+ + ++ ++
Sbjct: 17 EKIEGSLDKALPPADETPAKLHQAMRYAALGAGKRLRAALVYAAGQASAQQSALPSALEH 76
Query: 80 -----ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH 134
A A+EL+ ++I DDLPC+D+D LRRGKP+ H F EATA+LA AL LA
Sbjct: 77 TLSRAAVAVELIHAYSLIHDDLPCMDDDVLRRGKPTVHVQFDEATAMLAGDALQPLAFAQ 136
Query: 135 IA--------IIKAKNI-NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIE 185
+A +++A N+ A GS+G+ GQ +D+ S + +L F+HR KTG IE
Sbjct: 137 LAQMSVAPALVVQAVNVLAQAAGSQGMVGGQAIDLASVNTRLDPEQLQFMHRLKTGALIE 196
Query: 186 ASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKA 244
AS+ G I+ N + + N+G +G+A+Q+ +DI+DV + KT G+D +K
Sbjct: 197 ASVQLGAIVTAANSDIRMALENYGSAIGLAFQVVDDILDVTADQQALGKTPGKDAADNKP 256
Query: 245 TYPKLVGIDGSKKHAKEL 262
TY ++G+ S++ A++L
Sbjct: 257 TYVSVMGLAQSREFAQQL 274
>gi|421466128|ref|ZP_15914814.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
gi|400203639|gb|EJO34625.1| polyprenyl synthetase [Acinetobacter radioresistens WC-A-157]
Length = 302
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 159/277 (57%), Gaps = 24/277 (8%)
Query: 33 EAVPLPHP---AILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVT 88
EA LP P A+ H M GGKR+ LC A+ + S + A AIE++
Sbjct: 28 EAFSLPEPLKSAVYHAVML----GGKRVRPALCYATAALQPNSNFAAVRRAAVAIEMIHC 83
Query: 89 MAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIK 139
++ DDLPC+DND LRRG+P+ H FGE TA+LA L +A Q +A+ +
Sbjct: 84 YSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDQGVAVDQ 143
Query: 140 AKNINS----AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASI-VSGVII 194
A + A S + GQ+MD+ +EGK+V S+L IH +KTG I+A+I ++ V I
Sbjct: 144 AVVLRQMQILATASSKMVCGQVMDLQAEGKQVDQSQLENIHCNKTGALIQAAIMMAAVTI 203
Query: 195 GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGID 253
G ++ I ++R +G+ +G+A+Q+ +DI+D++ E+ KT G+D +K+TYP L+G++
Sbjct: 204 FKGTDQAIPQLRQYGQAIGLAFQVQDDILDIVSETEVLGKTAGKDEQVEKSTYPALMGLE 263
Query: 254 GSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVS 290
++ +AK+L +A L YF A L+ + F++S
Sbjct: 264 QAQLYAKQLHDQAFSALEYFGEA-AEELNTISQFLLS 299
>gi|389571717|ref|ZP_10161806.1| geranyltranstransferase [Bacillus sp. M 2-6]
gi|388428611|gb|EIL86407.1| geranyltranstransferase [Bacillus sp. M 2-6]
Length = 296
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 161/270 (59%), Gaps = 19/270 (7%)
Query: 16 VNEYKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+NE+ + + I + L V L P L +M YSL GGKRL L +A G +
Sbjct: 5 LNEFLTTRKQAIEDYLFTYVQELSIPEELKSSMLYSLKAGGKRLRPVLVLALLNAYGKRE 64
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL------ 127
+ + CA+E++ T ++I DDLPC+D+DDLRRGKP+NHKV+GEATA+LA AL
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 128 --------HCLAMQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
A Q + II + ++ G+ G+ GQ D+ +E K++ LSEL IH K
Sbjct: 125 LITSQLSDDVPADQKLRII--DELVTSAGALGMVGGQFDDMEAEQKQIPLSELESIHARK 182
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
TGK + S+V+G I+ G ++EIE++R F ++G+A+Q+ +DI+D+ GS E + ++ G D
Sbjct: 183 TGKLLTFSVVAGAILAGAPDDEIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRIGSD 242
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+K+TYP L+ + G+K+ E I AK+
Sbjct: 243 TANEKSTYPSLLTLSGAKEKLDEHITRAKE 272
>gi|379720811|ref|YP_005312942.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
gi|378569483|gb|AFC29793.1| polyprenyl synthetase [Paenibacillus mucilaginosus 3016]
Length = 301
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 23/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY A A +I + L ++P P L E++ YSL GGKRL L +A+ E + G
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGR 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM A A+E++ T ++I DDLP +DNDD RRGK +NHKV+GEA AILA AL A
Sbjct: 67 AEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAF 126
Query: 133 QHIAIIKAKN--------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
H A+ A+ + G+ G+ GQ D+ E L EL +IH H
Sbjct: 127 -HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGR 237
KT I S+ +G I G +++ + FG +G+A+Q+ +DI+D+IG + + +
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL---AYFDPTRAAPL-DHLVN 286
D+ + K TYP +GI+ S+ EL AEAK + + +P R L D+L+
Sbjct: 246 DVKQGKVTYPYFIGIEASEAKVAELTAEAKSAILGGGFPEPRRLLELADYLMK 298
>gi|194016844|ref|ZP_03055457.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
gi|194011450|gb|EDW21019.1| geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP
synthase) [Bacillus pumilus ATCC 7061]
Length = 296
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 164/268 (61%), Gaps = 15/268 (5%)
Query: 16 VNEYKALKAKQINEALDEAV-PLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+NE+ + + I + L V L P L +M YSL GGKRL L +A G ++
Sbjct: 5 LNEFLTTRKQTIEDYLFTYVQELTIPEDLKSSMLYSLKAGGKRLRPVLVLALLNAYGKNE 64
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ + CA+E++ T ++I DDLPC+D+DDLRRGKP+NHKV+GEATA+LA AL + +
Sbjct: 65 EDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVYGEATAVLAGDALLTESFR 124
Query: 134 HIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTG 181
I + ++++ + G+ G+ GQ D+ +E K+VSL+EL IH KTG
Sbjct: 125 LITSQLSSSVSADKKLRIVDELVKSAGALGMVGGQFDDMEAEQKQVSLAELESIHARKTG 184
Query: 182 KFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMM 240
K + S+ +G ++ G ++++IE++R F ++G+A+Q+ +DI+D+ GS E + ++ G D
Sbjct: 185 KLLTFSVAAGAMLAGASDDDIEKLREFSYHIGIAFQIRDDILDLEGSEEKIGKRVGSDTA 244
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+K+TYP L+ + G+K+ E I AK+
Sbjct: 245 NEKSTYPSLLTLSGAKEKLHEHITRAKE 272
>gi|431594933|ref|ZP_19522039.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
gi|430590859|gb|ELB28905.1| geranylgeranyl diphosphate synthase, type II [Enterococcus faecium
E1861]
Length = 296
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 140/225 (62%), Gaps = 12/225 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L +AM YS+ GGKR+ L +A+ V + +A A+E++ T ++I DDLP +D
Sbjct: 31 LCDAMTYSVKAGGKRIRPLLLLAAVASFDEPIDVPVYQVAAALEMVHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILA-----CQALHCLAMQHIA----IIKAKNINSAVGSEG 151
NDDLRRGKP+NHKVFGEA AILA A ++M H+ ++ + + G++G
Sbjct: 91 NDDLRRGKPTNHKVFGEALAILAGDGLLTGAFQLISMAHLGHSPKLLLLQQLAVCAGAQG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E K++SL EL FIH KTG+ I ++++G I+ EE + ++ ++
Sbjct: 151 MVAGQAADIEGESKKLSLEELAFIHERKTGRLIRYALLAGGILAKQPEEILLLLQRLAEH 210
Query: 212 VGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGS 255
+G+A+Q+ +D++DVIG + KT G+D +K TYP+L+G++ +
Sbjct: 211 LGLAFQIRDDLLDVIGITKTLGKTAGKDERMEKNTYPRLLGLEKT 255
>gi|392419665|ref|YP_006456269.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
gi|390981853|gb|AFM31846.1| geranyltranstransferase [Pseudomonas stutzeri CCUG 29243]
Length = 295
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 156/274 (56%), Gaps = 18/274 (6%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 24 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKTSADGAACAVELIHAYSLVHD 83
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN------------ 142
DLP +D+DDLRRG+P+ HK F EA AILA L LA + +A A N
Sbjct: 84 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA-QAAHNPQDATLRLRMFA 142
Query: 143 -INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEE 200
+ A G G+ GQ +D+ S G ++ L +HRHKTG IEAS+ G + G + +
Sbjct: 143 VLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGHADAD 202
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHA 259
+ + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +A
Sbjct: 203 NLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYA 262
Query: 260 KELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
EL +A L FD + A PL L +IV N
Sbjct: 263 LELRDQALHALRPFDIS-AEPLRELARYIVERRN 295
>gi|347757577|ref|YP_004865139.1| geranyltranstransferase [Micavibrio aeruginosavorus ARL-13]
gi|347590095|gb|AEP09137.1| geranyltranstransferase [Micavibrio aeruginosavorus ARL-13]
Length = 304
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 161/288 (55%), Gaps = 15/288 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQ 73
Q+NE K I L E+ LP A L EAMRY +L GGKRL + + S ++ G
Sbjct: 15 QMNEISEAVNKTIMRLLPES-DLPE-APLFEAMRYGTLNGGKRLRPFMLMQSAKLFGVDM 72
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
+ A A A+E + +++ DDLP +DN DLRRGKPS HK + EATAILA AL LA +
Sbjct: 73 ARARRAAAAVEFVHAYSLVHDDLPAMDNADLRRGKPSTHKAYDEATAILAGDALLTLAFE 132
Query: 134 HIAIIKAKN-----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
++ ++ + A G G+ GQ++D+ E +E L ++ + R KTGK
Sbjct: 133 VLSDVETHEDPRVRVELVNLLAKASGPHGLCGGQMLDLIGEKQEFDLGTISRLQRMKTGK 192
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMR 241
+ + +G ++G +E + + N+ +G+A+Q+ +DI+DV SPE M + TG+D
Sbjct: 193 LMAFACEAGAVLGKASEPMRKALCNYAYDLGLAFQVTDDILDVESSPEAMGKDTGKDAQA 252
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
K+T+ +G D ++ A+ L+ ++K+ L FD RA L L ++++
Sbjct: 253 GKSTFVSTMGKDQARARAQMLVEQSKRHLHIFDNGRADTLKELADYVL 300
>gi|254513451|ref|ZP_05125516.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
gi|221532455|gb|EEE35451.1| geranyltranstransferase [Rhodobacteraceae bacterium KLH11]
Length = 301
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 151/264 (57%), Gaps = 14/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L AMR+ L GGKRL L + ++G + +ACA+EL+ +++ DDLP
Sbjct: 36 PPRLLAAMRHGVLNGGKRLRPVLVLECAALLGRCDEGVLDVACALELIHCYSLVHDDLPA 95
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------AIIK---AKNINSAV 147
+DNDDLRRGKP+ H+ F EAT ILA AL LA I A I+ ++ ++ A
Sbjct: 96 MDNDDLRRGKPTVHRAFDEATGILAGDALLTLAFDVIGQEAAHPDATIRLQLSRELSKAS 155
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
G G+A GQ++D+ +E + + E+ H KTG + + +G I+ + + I+R+
Sbjct: 156 GVVGMAGGQMLDLQAEHCDRTEIEIYKFHAMKTGALLRYACRAGAILADASNDNIDRLTR 215
Query: 208 FGKYVGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
FG +G+++Q+ +D++DV+ SP E+ + TG+D KAT L G++ S+K L+A+A
Sbjct: 216 FGTTIGLSFQIADDLLDVVASPEELGKATGKDADAGKATLVGLWGVERSRKELDWLLADA 275
Query: 267 KQELAYFDPTRAAPLDHLVNFIVS 290
K+ L F T A L+ + FI +
Sbjct: 276 KELLEPFGAT-AETLNSIAAFIAT 298
>gi|420144547|ref|ZP_14652035.1| Farnesyl diphosphate synthase [Lactococcus garvieae IPLA 31405]
gi|391855999|gb|EIT66548.1| Farnesyl diphosphate synthase [Lactococcus garvieae IPLA 31405]
Length = 283
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 12/244 (4%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLP 97
P L +A+ YSL GGKR+ L + E +G + A +A +E++ ++I DDLP
Sbjct: 22 PQHLADAVTYSLAAGGKRIRPLLFLKMLESLGVTLETAHYQVAATVEMIHAGSLIHDDLP 81
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALH--------CLAMQHIAIIK-AKNINSAVG 148
+DNDD RRG+ +NHK F EATAILA AL L++ ++ K ++ A G
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPYYLLATLSLPAATVVSLVKELSFASG 141
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
S G+ AGQI+D+ EGK +SL ++ IH KTG+ + V+ II +EE I ++R
Sbjct: 142 SLGMVAGQILDMEGEGKNLSLEQVKEIHHLKTGRMLTFPFVAAGIIAEQSEEVIAKLREI 201
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ +G+A+Q+ +DI+DV G+ E KT G+D +K+TY L+G+ G+++ +EL+ K
Sbjct: 202 GQNLGLAFQIRDDIIDVTGTFEEIGKTPGKDQAEEKSTYVALLGLKGAQEALEELLTAVK 261
Query: 268 QELA 271
+LA
Sbjct: 262 SDLA 265
>gi|347521183|ref|YP_004778754.1| farnesyl diphosphate synthase [Lactococcus garvieae ATCC 49156]
gi|343179751|dbj|BAK58090.1| farnesyl diphosphate synthase [Lactococcus garvieae ATCC 49156]
Length = 283
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 146/244 (59%), Gaps = 12/244 (4%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLP 97
P L +A+ YSL GGKR+ L + E +G + A +A +E++ ++I DDLP
Sbjct: 22 PQHLADAVTYSLAAGGKRIRPLLFLKMLESLGVTLETAHYQVAATVEMIHAGSLIHDDLP 81
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALH--------CLAMQHIAIIK-AKNINSAVG 148
+DNDD RRG+ +NHK F EATAILA AL L++ ++ K ++ A G
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDALFLDPYYLLATLSLPAATVVSLVKELSFASG 141
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
S G+ AGQI+D+ EGK +SL ++ IH KTG+ + V+ II +EE I ++R
Sbjct: 142 SLGMVAGQILDMEGEGKNLSLEQVKEIHHLKTGRMLTFPFVAAGIIAEQSEEVIAKLREI 201
Query: 209 GKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ +G+A+Q+ +DI+DV G+ E KT G+D +K+TY L+G+ G+++ +EL+ K
Sbjct: 202 GQNLGLAFQIRDDIIDVTGTFEEIGKTPGKDQAEEKSTYVALLGLKGAQEALEELLTAVK 261
Query: 268 QELA 271
+LA
Sbjct: 262 SDLA 265
>gi|340756656|ref|ZP_08693261.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
gi|251833919|gb|EES62482.1| dimethylallyltranstransferase [Fusobacterium varium ATCC 27725]
Length = 295
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 154/275 (56%), Gaps = 21/275 (7%)
Query: 37 LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L +P ++ E M+Y+ L GGKRL L +++ + ++ A AIE++ + +++ DD
Sbjct: 25 LNYPEVIAEGMKYAVLNGGKRLRPILLFMVLDILDCDKEKGIASAAAIEMIHSYSLVHDD 84
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQAL-------------HCLAMQHIAIIKAKN 142
LP LDNDD RRGK + HK FGEA IL AL H A + + I++ +
Sbjct: 85 LPALDNDDYRRGKLTTHKKFGEAEGILIGDALLTHAFYILTEKNKHLPAEKIVEIVRLTS 144
Query: 143 INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEI 202
S G G+ GQ++DI SEGK++ L L ++H +KTGK ++ + IIG + EE
Sbjct: 145 --SYAGINGMIGGQMVDIASEGKKIDLETLKYMHSNKTGKLMKLPVELACIIGDADREER 202
Query: 203 ERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKE 261
E + F + +G+A+Q+ +DI+D+ G + + G D+ K+TYP L+G+ SK KE
Sbjct: 203 EVLVKFSELIGLAFQIKDDILDIEGDFSTLGKPVGSDIELGKSTYPSLIGMAESKTLLKE 262
Query: 262 LIAEAKQELA-YFDPTRAAPLDHLVNFIVSFGNNN 295
IAEAK +A F ++ L L ++I GN N
Sbjct: 263 TIAEAKMIVAEKFGVEKSNILLELADYI---GNRN 294
>gi|387771846|ref|ZP_10128003.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
gi|386908231|gb|EIJ72929.1| polyprenyl synthetase [Haemophilus parahaemolyticus HK385]
Length = 297
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 152/254 (59%), Gaps = 18/254 (7%)
Query: 51 LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPS 110
L GGKR+ L A+ M+G + + A A+E + +++ DDLP +D+D LRRGKP+
Sbjct: 43 LLGGKRVRPFLMYATGRMLGVDLTKIDASAGAMESIHAYSLVHDDLPAMDDDMLRRGKPT 102
Query: 111 NHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEGIAAGQIMDI 160
H F EATAILA AL A + IA I + +++ A G++G+ GQ +D+
Sbjct: 103 CHIAFDEATAILAGDALQSFAFELIADDEHLPPLQKIRQIQSLAKAAGAKGMCLGQNLDL 162
Query: 161 NSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE-EIE-RMRNFGKYVGMAYQL 218
+E K VSL EL FIHR+KTG IEAS++ G + E+ IE +++ + + +G+A+Q+
Sbjct: 163 LAENKAVSLEELEFIHRNKTGALIEASVLMGFNLSDYAEDRRIEMQLQRYAQAIGLAFQV 222
Query: 219 WNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAY--FDP 275
+DI+DVIG + KT G D +K+TYPKL+G++G+++ A+ L A L+ FD
Sbjct: 223 QDDILDVIGETDKIGKTAGADEQHNKSTYPKLLGLEGAQQKAEGLYQIALDALSELNFDT 282
Query: 276 TRAAPLDHLVNFIV 289
T L L NFI+
Sbjct: 283 T---ALKELANFII 293
>gi|392373426|ref|YP_003205259.1| Geranyltranstransferase (Farnesyl-diphosphate synthase) (FPP
synthase) [Candidatus Methylomirabilis oxyfera]
gi|258591119|emb|CBE67414.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
(FPP synthase) [Candidatus Methylomirabilis oxyfera]
Length = 312
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 168/296 (56%), Gaps = 37/296 (12%)
Query: 27 INEALDEAVPLPH--PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
++EAL++ +P P +HEA+RYS+ GGKRL L +A+ E GG A+ A AI
Sbjct: 17 VDEALEQYLPQASDPPKEIHEAVRYSVFAGGKRLRPILILAATEAAGGQMEQALGAAAAI 76
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN- 142
E++ T ++I DDLP +D+DD RRG+ + HKV+GEA AILA AL Q ++ A+N
Sbjct: 77 EMIHTYSLIHDDLPAMDDDDYRRGRLTCHKVYGEAMAILAGDALLT---QAFILLSAENP 133
Query: 143 ----------------------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNF 174
I A GS+G+ GQ++D+ E +E+ L L +
Sbjct: 134 PCPPLAKGGWGDLKGVYDSEARLMVIREIAEAAGSKGMVGGQVVDMLQEDREIDLPTLTY 193
Query: 175 IHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MRE 233
+H HKTG I + G I+ E++E + +G+ +G+A+Q+ +DI+D+ GS E + +
Sbjct: 194 LHEHKTGALIRVCLRVGGILASAGSEQMEALTRYGERIGLAFQIVDDILDLEGSLEVLGK 253
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ G D+ + KAT+P L+GI+ S++ A L++EA++ +A F R L + F+V
Sbjct: 254 QAGSDLRKKKATFPALLGIEESRRWAHRLVSEAQEAVAVFG-DRGVALQAIAEFVV 308
>gi|326201956|ref|ZP_08191826.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987751|gb|EGD48577.1| Polyprenyl synthetase [Clostridium papyrosolvens DSM 2782]
Length = 294
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 149/262 (56%), Gaps = 15/262 (5%)
Query: 27 INEALDEAVPLPHPAIL--HEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
I E L +P + L +AM YSL GGKRL L +A EM+ ++ CAI
Sbjct: 14 IEERLQNIIPEVNEYCLDIKKAMSYSLLAGGKRLRPLLALAVAEMLDKPFDEVINFGCAI 73
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--IIKAK 141
E++ T ++I DDLP +DNDD RRGKP+NHKVFGEA AILA L +A + + +++K
Sbjct: 74 EMIHTYSLIHDDLPAMDNDDYRRGKPTNHKVFGEAMAILAGDGLLNMAYEIMINDAVESK 133
Query: 142 NINSA---------VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGV 192
+I+ GS G+ GQ++D+ SEGK + L +HR KTG I+A + +
Sbjct: 134 SIDKMRAAGIVAKYAGSLGMVGGQVIDLQSEGKTIESDRLKTMHRLKTGALIKAPVEAAA 193
Query: 193 IIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVG 251
+I G +++E E + + +G+A+Q+ +DI+D+ G+ E M + G D +K+TY + G
Sbjct: 194 VICGADKKEFELLSGYAANLGLAFQIKDDILDIEGTVENMGKNPGNDSSCNKSTYVTMYG 253
Query: 252 IDGSKKHAKELIAEAKQELAYF 273
++ SKK + + E L F
Sbjct: 254 LEESKKLLETVTQEGISCLEAF 275
>gi|389681791|ref|ZP_10173135.1| geranyltranstransferase [Pseudomonas chlororaphis O6]
gi|388554326|gb|EIM17575.1| geranyltranstransferase [Pseudomonas chlororaphis O6]
Length = 295
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 167/293 (56%), Gaps = 22/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHP--AILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL+ P P A L+EAMRYS + GGKR+ L A+CE +G
Sbjct: 2 IAAYQASSQARVNAALETLFHAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGAR 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 PEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAVGSE--------------GIAAGQIMDINSEGKEVSLSELNFIHRH 178
A++ + +S+ + G+ GQ +D+ S G ++ L ++HRH
Sbjct: 122 S--ALLDPRLSDSSAETRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRH 179
Query: 179 KTGKFIEASIVSGVIIGGGNE-EEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTG 236
KTG IEAS+ G + G E +E++ ++ + + +G+A+Q+ +DI+DV + + ++ G
Sbjct: 180 KTGALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQG 239
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ RDK TYP L+G++ +K +A EL +A L FD A PL L +IV
Sbjct: 240 ADIARDKPTYPALLGLEAAKAYALELRDQALHALRPFDAG-AEPLRELARYIV 291
>gi|386723418|ref|YP_006189744.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
gi|384090543|gb|AFH61979.1| polyprenyl synthetase [Paenibacillus mucilaginosus K02]
Length = 301
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 23/293 (7%)
Query: 16 VNEYKALKAKQINEALDEAVP--LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
+ EY A A +I + L ++P P L E++ YSL GGKRL L +A+ E + G
Sbjct: 7 IKEYIAALAGRIEDELKTSLPEQWSVPGALRESVMYSLMAGGKRLRPILVLAAAEALQGR 66
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
AM A A+E++ T ++I DDLP +DNDD RRGK +NHKV+GEA AILA AL A
Sbjct: 67 AEAAMPAALAVEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEAMAILAGDALLTHAF 126
Query: 133 QHIAIIKAKN--------------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRH 178
H A+ A+ + G+ G+ GQ D+ E L EL +IH H
Sbjct: 127 -HTAVQAARRHGVPADVVVDIVEELAKLAGAPGMVGGQAADMLGEQGLTKLEELEYIHLH 185
Query: 179 KTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGR 237
KT I S+ +G I G +++ + FG +G+A+Q+ +DI+D+IG + + +
Sbjct: 186 KTSDLIVFSLKAGGRIAGATSAQLDALERFGTCIGLAFQIQDDILDLIGDEQKLGKPVQS 245
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL---AYFDPTRAAPL-DHLVN 286
D+ + K TYP +GI+ S+ EL AEAK + + +P R L D+L+
Sbjct: 246 DVKQGKVTYPYFIGIEASEAKVAELTAEAKNAILGGGFPEPRRLLELADYLMK 298
>gi|291613174|ref|YP_003523331.1| polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583286|gb|ADE10944.1| Polyprenyl synthetase [Sideroxydans lithotrophicus ES-1]
Length = 295
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 149/263 (56%), Gaps = 14/263 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LH AMRYS L GGKR+ L A+ E+ G A A+EL+ +++ DD+PC
Sbjct: 30 PQRLHAAMRYSVLEGGKRVRPLLAYAAGELAGAPIERVEIAAAAVELIHAYSLVHDDMPC 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAV 147
+D+D LRRGKP+ H + EATA+L AL LA Q ++ + + + +A
Sbjct: 90 MDDDVLRRGKPTCHIEYDEATALLVGDALQSLAFQLLSEHRLSDDPSRQLQMVRLLAAAS 149
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRN 207
GS G+A GQ +D+ S GK++++ EL +H +KTG I A+I+ G G ++ +++++
Sbjct: 150 GSRGMAGGQAIDLASVGKQLAMPELEQMHIYKTGALIRAAILLGAHCGKLDQAQLDKLDR 209
Query: 208 FGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+GK +G+A+Q+ +D++D KT G+D DK TY L+G+ +K+ A L EA
Sbjct: 210 YGKCIGLAFQVVDDVLDSEADTATLGKTAGKDKDNDKPTYVTLLGVQAAKRMAATLHQEA 269
Query: 267 KQELAYFDPTRAAPLDHLVNFIV 289
L F + A L L +FIV
Sbjct: 270 LDTLKEFGAS-AQRLHDLADFIV 291
>gi|409397083|ref|ZP_11248026.1| geranyltranstransferase [Pseudomonas sp. Chol1]
gi|409118585|gb|EKM94984.1| geranyltranstransferase [Pseudomonas sp. Chol1]
Length = 296
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 166/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ +Y+ ++++ L+ P P + L++AMRYS + GGKR+ L A+CE + G
Sbjct: 3 IGDYQKDCQQRVDSCLEALFAPPRPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALRGD 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 63 RATADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 122
Query: 133 QHIAIIKAKNINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + ++A+ G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 123 EAMAEARHNPPDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDREALELMHRHKT 182
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IEAS+ G + G + + + + ++ + +G+A+Q+ +DI+DV + + + G D
Sbjct: 183 GALIEASVQLGALASGHADADSLGALSHYARAIGLAFQVQDDILDVESDTATLGKHQGAD 242
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L FIV
Sbjct: 243 IARDKPTYPALLGLDAAKAYAIELRDQALHALRPFD-IAAEPLRDLARFIV 292
>gi|293610957|ref|ZP_06693256.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423702|ref|ZP_18913843.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
gi|292826609|gb|EFF84975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699362|gb|EKU68977.1| polyprenyl synthetase [Acinetobacter baumannii WC-136]
Length = 303
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 153/257 (59%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------------AII 138
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + AI+
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 139 KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
+ A S + +GQ++D+ +EGK+++ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVSGQVLDLQAEGKKITQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ +K
Sbjct: 208 TDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAK 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 VYAKELHDQAFEALAHF 284
>gi|445063263|ref|ZP_21375494.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
gi|444505355|gb|ELV05886.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30599]
Length = 294
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 158/291 (54%), Gaps = 20/291 (6%)
Query: 16 VNEYKALKAKQINEALD-----EAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+ EY ++ ++IN+ +D ++ L + I E ++Y L GGKRL L +CE+
Sbjct: 3 LKEYMNVRLEEINKTIDNVFDKSSIELENSFI--EMLKYPLDAGGKRLRPILTCLACEIF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G ++ A A+EL+ T +++ DDLP +DNDDLRRGKP+ H +GEA AIL L
Sbjct: 61 EGDYKKSIIPAVALELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLT 120
Query: 130 LAMQHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A Q ++ K+ ++ A G G+ GQ +D+ E KE++ L +H KT
Sbjct: 121 HAFQLLSKADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKILHAKKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G I ++ G I N+ +IE + + + VG+A+Q+ +DI+DVI E KT G+D
Sbjct: 181 GAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVGKDE 239
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELA-YFDPTRAAPLDHLVNFIV 289
K TY K G++G+KK AK++ +A + L Y D L L N+I+
Sbjct: 240 KEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYII 290
>gi|366053058|ref|ZP_09450780.1| farnesyl-diphosphate synthase [Lactobacillus suebicus KCTC 3549]
Length = 293
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 147/243 (60%), Gaps = 15/243 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV-AMSMACAIELLVTMAVIQDDLPCLD 100
L+++M YSL GGKRL +L +A+ ++ S + ACA+ELL T ++I DDLP +D
Sbjct: 31 LNDSMSYSLLAGGKRLRPSLTLATFQIFNDQLSDDVIKAACAVELLHTYSLIHDDLPAMD 90
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-------IIKAKNI--NSAVGSEG 151
NDDLRRG +NH FG A LA L LA Q +A I++ I + A G G
Sbjct: 91 NDDLRRGVATNHVKFGAGMATLAGDGLLTLAFQWVADNQLDDHIVRQLVIEFSKAAGPAG 150
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E +++++++L +H +KTG + + ++G II ++ ++ + FG+
Sbjct: 151 MVAGQAADILGEHQQLTINQLQVLHSNKTGALLRYATIAGGIIADVDQNTLKLLAKFGEI 210
Query: 212 VGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA---K 267
G+A+Q+++D++DVIG+ +M ++ +D K TYP+L+GIDG+KK + +A K
Sbjct: 211 FGLAFQIYDDLMDVIGTTAQMGKQVHKDHDEHKNTYPELLGIDGTKKALSRALGDAVGTK 270
Query: 268 QEL 270
+EL
Sbjct: 271 EEL 273
>gi|334127647|ref|ZP_08501552.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
gi|333388960|gb|EGK60127.1| geranyltranstransferase [Centipeda periodontii DSM 2778]
Length = 291
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 154/260 (59%), Gaps = 13/260 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +M YSL GGKRL L +A+ + +G + + +ACA+E++ T ++I DDLP +DN
Sbjct: 30 LRASMEYSLMAGGKRLRPVLLMAAADAVGADGTKFLPVACALEMIHTYSLIHDDLPAMDN 89
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---------AIIKAKN-INSAVGSEG 151
D+LRRGKP+NH F E AILA AL LA I A+++ + I+ A G+EG
Sbjct: 90 DNLRRGKPTNHVKFSEGIAILAGDALLTLAFTVILRQKDVPAEALLRVVDEISRAAGAEG 149
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++D+ +E ++++ EL +H KTG A++ SG I+ G +EE++ + + +
Sbjct: 150 MVGGQVLDLAAENCQITMEELRRVHMGKTGALFHAALRSGAILAGASEEQLAVLTAYADH 209
Query: 212 VGMAYQLWNDIVDVIGSP-EMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
G+A+Q+ +DI+DVIGS E+ + G D K+TY L + +++ A+ + EA L
Sbjct: 210 FGLAFQITDDILDVIGSAEELGKPVGSDEKNHKSTYVSLTSLAEAQELARNTVEEAVAAL 269
Query: 271 AYFDPTRAAPLDHLVNFIVS 290
F T A L LV ++V+
Sbjct: 270 DGFG-TEADFLRALVTYLVN 288
>gi|298528183|ref|ZP_07015587.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511835|gb|EFI35737.1| Polyprenyl synthetase [Desulfonatronospira thiodismutans ASO3-1]
Length = 298
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 155/285 (54%), Gaps = 16/285 (5%)
Query: 21 ALKAKQINEALDEAVPLPH-PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMS 78
A +AK+I + L+ + P L +AM YSL GGKR+ LC+A EM G +
Sbjct: 10 ASRAKEIEDYLESCLQFEGVPGELQQAMEYSLMAGGKRVRPVLCLAWGEMTGACTKDILP 69
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL--HCLAMQHIA 136
A +E++ T +++ DDLP +DNDDLRRGKP++HK FGEA AILA L AM
Sbjct: 70 FASGLEMIHTYSLVHDDLPAMDNDDLRRGKPTSHKKFGEALAILAGDGLLTQAFAMMLKT 129
Query: 137 IIKAKNI-------NSAVGSEGIAAGQIMDINSEGKE-VSLSELNFIHRHKTGKFIEASI 188
A+N+ A G G+ GQ +D+ + G+E + L +L +H KTG + A+
Sbjct: 130 SFPAENVLAAAGTVAQAAGPAGMVGGQCIDMRATGRESMELVDLKGMHAMKTGALLRAAC 189
Query: 189 VSGVIIGGGNEE---EIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKA 244
SG I+ G + E + N+G +G+A+Q+ +DI+DV G + + + G D +K+
Sbjct: 190 CSGAILAGSDPENGRDTLNAYNYGSNIGLAFQIVDDILDVTGDEKSLGKPVGSDESVNKS 249
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
TYP+ +G++ S++ A+ EAK L + L L +IV
Sbjct: 250 TYPRFLGLEKSRELAQTAADEAKTCLRDYQGQGRDFLYRLAQYIV 294
>gi|49476181|ref|YP_034222.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
gi|49238989|emb|CAF28289.1| Geranyltranstransferase (farnesyl-diphosphate synthase) [Bartonella
henselae str. Houston-1]
Length = 300
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 14/270 (5%)
Query: 37 LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
+ P IL +AMRY L GGKRL L I SC + ++++A A+E + ++I DD
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSCALFDIPIEYSLNVASALECIHCYSLIHDD 91
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNIN 144
LP +DND LRRG+P+ H F EATAILA AL A + IA I +
Sbjct: 92 LPAMDNDTLRRGQPTVHIAFDEATAILAGNALLTFAFEIIAHKTSELSFETRIRLITALA 151
Query: 145 SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIER 204
A G G+ GQ++D+ +E K ++ + KT I + +G IIG ++E E+
Sbjct: 152 QASGLGGMIGGQMLDLEAEKKPQESKDITTLQHMKTATLISFACQAGAIIGNASQELTEK 211
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ FG Y+G+A+QL +D++DV S ++ KT G+D KAT+ +L GI+ ++K ELI
Sbjct: 212 LAAFGTYLGLAFQLTDDLLDVTASTKVLGKTAGKDETAHKATFIRLYGIEETQKKRDELI 271
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A+A+ L F +A PL F + N
Sbjct: 272 AQAEALLLPFG-AKATPLQQAARFSATRKN 300
>gi|431925836|ref|YP_007238870.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
gi|431824123|gb|AGA85240.1| geranylgeranyl pyrophosphate synthase [Pseudomonas stutzeri RCH2]
Length = 296
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 155/274 (56%), Gaps = 18/274 (6%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 25 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHD 84
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN------------ 142
DLP +D+DDLRRG+P+ HK F EA AILA L LA + +A A N
Sbjct: 85 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMA-QAAHNPQDATLRLRMFA 143
Query: 143 -INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEE 200
+ A G G+ GQ +D+ S G ++ L +HRHKTG IEAS+ G + G + +
Sbjct: 144 VLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADAD 203
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHA 259
+ + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +A
Sbjct: 204 NLASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYA 263
Query: 260 KELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
EL +A L FD A PL L +IV N
Sbjct: 264 LELRDQALHALRPFD-IAAEPLRELARYIVERRN 296
>gi|225018823|ref|ZP_03708015.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
gi|224948383|gb|EEG29592.1| hypothetical protein CLOSTMETH_02773 [Clostridium methylpentosum
DSM 5476]
Length = 300
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 160/275 (58%), Gaps = 17/275 (6%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQ 73
Q+NEY L +++ L + L + +AMRYS+ GGKR+ L + C M+GG
Sbjct: 11 QLNEYIQLVDRELERLLPDEDILQKSVV--DAMRYSVTAGGKRIRPVLTLEVCRMLGGDP 68
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+ ACA+EL+ + ++I DDLPC+D+D +RRGKPS H FGE+TA+LA AL LA +
Sbjct: 69 HKALPFACAVELIHSYSLIHDDLPCMDDDAMRRGKPSCHIAFGESTALLAGDALLTLAFE 128
Query: 134 HIA------------IIKAKNINSAV-GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ ++A +I S + G G+ GQ++D+ SEG+ + L+ +H KT
Sbjct: 129 TASHAPQTHGTGCEETLRAISILSRLAGVHGMIGGQVIDLESEGRGIEYPVLHQMHLLKT 188
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDM 239
G I+A+ G G EE+++++ + +G+A+Q+ +DI+DV+G ++ + G D
Sbjct: 189 GALIKAACQMGAAAAGAQEEDLDKIGEYADALGLAFQICDDILDVVGDEAQLGKPVGSDK 248
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFD 274
+ K ++ L G++ S+ +A+ + AK+ LA F+
Sbjct: 249 QQQKTSFITLFGLEESRSNAQMMTTLAKESLASFE 283
>gi|146284017|ref|YP_001174170.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
gi|145572222|gb|ABP81328.1| geranyltranstransferase [Pseudomonas stutzeri A1501]
Length = 295
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 156/273 (57%), Gaps = 16/273 (5%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 24 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHD 83
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV------- 147
DLP +D+DDLRRG+P+ HK F EA AILA L LA + +A + ++A+
Sbjct: 84 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAV 143
Query: 148 -----GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEEE 201
G G+ GQ +D+ S G ++ L +HRHKTG IEAS+ G + G + +
Sbjct: 144 LARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADN 203
Query: 202 IERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAK 260
+ + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +A
Sbjct: 204 LASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYAL 263
Query: 261 ELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
EL +A L FD A PL L +IV N
Sbjct: 264 ELRDQALHALRPFDFA-AEPLRELARYIVERRN 295
>gi|257464799|ref|ZP_05629170.1| geranyltranstransferase [Actinobacillus minor 202]
gi|257450459|gb|EEV24502.1| geranyltranstransferase [Actinobacillus minor 202]
Length = 299
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 155/264 (58%), Gaps = 21/264 (7%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM Y+ L GGKR+ L A+ M+G S A A+E + +++ DDLP +D+
Sbjct: 36 LIDAMAYAVLLGGKRVRPFLIYATGRMLGVSLEALDHSAAAMESIHAYSLVHDDLPAMDD 95
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-------IIKAKNINS---AVGSEG 151
D LRRGKP+ H F EATAILA +L A + IA + K K I S A G+ G
Sbjct: 96 DKLRRGKPTCHIAFDEATAILAGDSLQTFAFELIAKDPFLTDLQKVKQIQSLAQAAGARG 155
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEEEIER-MRNFG 209
+ GQ +D+ SE K +SLSEL IHR+KTG I AS++ G + +E+I+ + +
Sbjct: 156 MCLGQSLDLISENKAISLSELELIHRNKTGALIVASVLMGFNLSDYARDEKIKNALECYA 215
Query: 210 KYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIA---E 265
K +G+A+Q+ +DI+DVIG + KT G D +K+TYPKL+G++G+ + A+ L E
Sbjct: 216 KAIGLAFQVQDDILDVIGDTDKIGKTAGSDESLNKSTYPKLLGLEGAMEKAQSLYQTSLE 275
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A EL + TRA L L +FI+
Sbjct: 276 ALDELPF--DTRA--LKALAHFII 295
>gi|171060046|ref|YP_001792395.1| polyprenyl synthetase [Leptothrix cholodnii SP-6]
gi|170777491|gb|ACB35630.1| Polyprenyl synthetase [Leptothrix cholodnii SP-6]
Length = 298
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 15/269 (5%)
Query: 17 NEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSV 75
+++ Q+ LD VP PA L AMRY L GGKRL L +A+ + G
Sbjct: 7 DDWMRTALDQVEIELDRQVPADAPAELGLAMRYGVLDGGKRLRPLLVLAAAGCVDGHPEA 66
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
A+ ACA+EL+ ++I DD+PC+DND LRRGKP+ H +GEA A+LA A+ LA + +
Sbjct: 67 ALRAACAVELIHAYSLIHDDMPCMDNDVLRRGKPTVHVQYGEARAMLAGDAMQALAFEVL 126
Query: 136 A----------IIKAK---NINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
++A+ + A G G+A GQ +D+ GK++ + L +H KTG
Sbjct: 127 TPEDTDDGVPPALQARLCSLLARASGVLGMAGGQAIDLAHVGKQMDEAALQDMHGRKTGA 186
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMR 241
++AS++ G G + + + ++G +G+A+Q+ +DI+DV E KT G+D +
Sbjct: 187 LLQASVLMGAACGRTTPAQWQALADYGWAIGLAFQVVDDILDVTQCAETLGKTAGKDADQ 246
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+K TY L+G++G+++ A+ L A+A L
Sbjct: 247 NKPTYVSLLGLEGARERAQSLHAQAHAAL 275
>gi|423713466|ref|ZP_17687726.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423507|gb|EJF89702.1| hypothetical protein ME1_00472 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 300
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 146/270 (54%), Gaps = 14/270 (5%)
Query: 37 LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
+ P IL +AMRY L GGKRL L I S + ++ +ACA+E + ++I DD
Sbjct: 32 IARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPPEHSLDVACALECVHCYSLIHDD 91
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNIN 144
LP +DND LRRG+P+ HK F EATAILA AL A + IA I +
Sbjct: 92 LPAMDNDTLRRGQPTVHKAFDEATAILAGNALLTFAFEIIAHKAFALSFETRIKLITALA 151
Query: 145 SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIER 204
+ G G+ GQ++DI +E + + + R KT I + +G II ++E E+
Sbjct: 152 QSAGLGGMIGGQMLDIEAEKTPQESTNIMTLQRMKTAALISFACQAGAIISNASQELTEK 211
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ FG Y+G+A+QL +D++DV S E KT G+D KAT+ +L GI ++K ELI
Sbjct: 212 LAAFGTYLGLAFQLTDDLLDVTASSEDLGKTAGKDETAQKATFVRLYGIKETQKKRDELI 271
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A+A+ L F +A PL +F V+ N
Sbjct: 272 AKAESLLHSFGE-KAKPLQQAAHFSVTRKN 300
>gi|339495741|ref|YP_004716034.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338803113|gb|AEJ06945.1| geranyltranstransferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 296
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 156/273 (57%), Gaps = 16/273 (5%)
Query: 36 PLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
PLP L++AMRYS + GGKR+ L A+CE + G ++ A ACA+EL+ +++ D
Sbjct: 25 PLPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGDKASADGAACAVELIHAYSLVHD 84
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINSAV------- 147
DLP +D+DDLRRG+P+ HK F EA AILA L LA + +A + ++A+
Sbjct: 85 DLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFEAMAQERHNPQDAALRLRMFAV 144
Query: 148 -----GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG-GNEEE 201
G G+ GQ +D+ S G ++ L +HRHKTG IEAS+ G + G + +
Sbjct: 145 LARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKTGALIEASVQLGALASGRADADN 204
Query: 202 IERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRDMMRDKATYPKLVGIDGSKKHAK 260
+ + + + +G+A+Q+ +DI+DV + + + G D+ RDK TYP L+G+D +K +A
Sbjct: 205 LASLSQYARAIGLAFQVQDDILDVESDTATLGKHQGADIARDKPTYPALLGMDAAKAYAL 264
Query: 261 ELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
EL +A L FD A PL L +IV N
Sbjct: 265 ELRDQALHALRPFDFA-AEPLRELARYIVERRN 296
>gi|401565678|ref|ZP_10806501.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
gi|400185582|gb|EJO19809.1| geranyltranstransferase [Selenomonas sp. FOBRC6]
Length = 291
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 158/262 (60%), Gaps = 13/262 (4%)
Query: 41 AILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCL 99
A L +M YSL GGKRL L +A+ + +G + + +A A+E++ T ++I DDLP +
Sbjct: 28 ATLRASMSYSLMAGGKRLRPILLMAAADAVGADGTKFLPVAAALEMIHTYSLIHDDLPAM 87
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI---------AIIKAKN-INSAVGS 149
D+D+LRRGKP+NH V+G+ AILA AL LA I A+++ + I+ A G+
Sbjct: 88 DDDELRRGKPTNHVVYGDGIAILAGDALLTLAFSVILRQKDVHAEALLRVVDEISRAAGA 147
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E +++++ EL +H KTG A++ SG I+ G EE++ + +
Sbjct: 148 EGMVGGQVLDLMAEDRQITMEELRRVHMGKTGALFHAALRSGAILAGATEEQLAALTAYA 207
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DVIG+ E + + G D K+TY L + +++ A+ + +A+
Sbjct: 208 DHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLAEAQELARRTVEDAEA 267
Query: 269 ELAYFDPTRAAPLDHLVNFIVS 290
L+ F + A L LV ++V+
Sbjct: 268 ALSVF-GSEADFLRQLVAYLVN 288
>gi|388547622|ref|ZP_10150884.1| geranyltranstransferase [Pseudomonas sp. M47T1]
gi|388274222|gb|EIK93822.1| geranyltranstransferase [Pseudomonas sp. M47T1]
Length = 295
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 163/291 (56%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDE--AVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
++ Y+A +++ AL + P P A L+EAMRYS + GGKR+ L A+CE +G
Sbjct: 2 MSSYQATCQARVDTALSSLFSAPAPELARLYEAMRYSVMNGGKRVRPLLVYAACEALGAP 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEHADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ K AV G G+ GQ +D+ S GK++ L +HRHKT
Sbjct: 122 TALLDEKLSPQGEAVRLQMAMALAQAAGPAGMVGGQAIDLGSVGKKLDQDALELMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRD 238
G IEAS+ G + G ++ + ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVQLGALASGRATVQQRQALKTYAQAIGLAFQVQDDILDVESDTQTLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+ +K +A +L +A + L FD A PL L +IV
Sbjct: 242 IARDKPTYPALLGMGMAKAYALQLRDQALEALLPFDEA-AEPLRELARYIV 291
>gi|260494283|ref|ZP_05814414.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
gi|260198429|gb|EEW95945.1| dimethylallyltransferase [Fusobacterium sp. 3_1_33]
Length = 297
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 150/271 (55%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + M Y+ L GGKRL L + E++ + A A+E++ + ++
Sbjct: 22 ELKELSYPETIANGMEYAILNGGKRLRPFLLFVTLELLNEDIKKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAIL-----ACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA IL A + L+ +++ ++ +K I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G G+ GQ++DI SE K++ L L +IH HKTGK I+ SI II +
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLSIEIACIIANVEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E + + G D+ KATYP ++G++ SKK
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ +AKQ + F + L L +FI
Sbjct: 262 LNNTVEKAKQIIKNKFGEEKGKILISLADFI 292
>gi|429124140|ref|ZP_19184672.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
gi|426279870|gb|EKV56889.1| geranylgeranyl pyrophosphate synthase [Brachyspira hampsonii 30446]
Length = 294
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 156/291 (53%), Gaps = 20/291 (6%)
Query: 16 VNEYKALKAKQINEALDEA-----VPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+ EY + ++IN+ +D + L + I E ++Y L GGKRL L +CE+
Sbjct: 3 LKEYMNARLEEINKTIDNVFEKSNIELENSFI--EMLKYPLDAGGKRLRPILTCLACELF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G ++ A ++EL+ T +++ DDLP +DNDDLRRGKP+ H +GEA AIL L
Sbjct: 61 EGDYKKSIIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLT 120
Query: 130 LAMQHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A Q ++ K+ ++ A G G+ GQ +D+ E KE++ L +H KT
Sbjct: 121 YAFQLLSKTDVKDSTLRKLLFELSYAAGVNGMVMGQFIDLYYEEKEINFDMLKVLHAKKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
G I ++ G I N+ +IE + + + VG+A+Q+ +DI+DVI E KT G+D
Sbjct: 181 GAMIRGAVRLGA-ISSENDNDIENITKYAEAVGLAFQIQDDILDVISDNETLGKTVGKDE 239
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELA-YFDPTRAAPLDHLVNFIV 289
K TY K G++G+KK AK++ +A + L Y D L L N+I+
Sbjct: 240 KEGKLTYVKQFGLEGAKKEAKKVTEKAIEYLKPYKDSEAKNILIELANYII 290
>gi|296327940|ref|ZP_06870475.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154896|gb|EFG95678.1| geranyltranstransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 297
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 153/271 (56%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + + M Y+ L GGKRL L A+ E++ + + A A+E++ + ++
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAI-----LACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA I L A + L+ +++ ++ +K I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G +G+ GQ++DI SE K++ L L +IH HKTGK I+ I II +
Sbjct: 142 ISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E + + G D+ KATYP ++G++ SKK
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ +AK+ + F + L L +FI
Sbjct: 262 LNNTVEKAKEIIKNKFGEEKGKVLISLADFI 292
>gi|423016477|ref|ZP_17007198.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
gi|338780419|gb|EGP44827.1| geranyltranstransferase [Achromobacter xylosoxidans AXX-A]
Length = 303
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 165/293 (56%), Gaps = 24/293 (8%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGG 71
E+ + + + + LD+ +P PA LHEAMRY+ L GGKR+ + L A+ C + G
Sbjct: 10 EWLQGRVRHVEDVLDDLLPPADAVPARLHEAMRYAVLGGGKRVRAALVYAAGQACPVSGS 69
Query: 72 SQSVAMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
+V S+ A A+EL+ +++ DDLPC+D+D LRRG+P+ H F EATA+LA AL
Sbjct: 70 VLAVEASLDRAAAAVELIHAYSLVHDDLPCMDDDVLRRGRPTTHVQFDEATAMLAGDALQ 129
Query: 129 CLAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA + +A I++A +++ A GS+G+A GQ +D+ S G +S EL +H K
Sbjct: 130 PLAFELLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHRLSRDELQQMHSMK 189
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
TG + S+ G I+ G + + + + + +G+A+Q+ +DI+DV S + + G+D
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDIYAQAMGLAFQVVDDILDVTADSASLGKTPGKD 249
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAA--PLDHLVNFIV 289
+K TY L+G+D ++ A EL A L +P A L L +FIV
Sbjct: 250 AAENKPTYVSLLGLDEARAFASELREAA---LVALEPLGDAGKRLAELADFIV 299
>gi|417550902|ref|ZP_12201981.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
gi|417565272|ref|ZP_12216146.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|395557028|gb|EJG23029.1| polyprenyl synthetase [Acinetobacter baumannii OIFC143]
gi|400386727|gb|EJP49801.1| polyprenyl synthetase [Acinetobacter baumannii Naval-18]
Length = 303
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 153/257 (59%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------------AII 138
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + AI+
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 139 KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
+ A S + +GQ++D+ +EGK+++ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVSGQVLDLQAEGKQITQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQTIGLAFQVLDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 VYAKELHDQAFEALAHF 284
>gi|237747173|ref|ZP_04577653.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
gi|229378524|gb|EEO28615.1| geranyltranstransferase [Oxalobacter formigenes HOxBLS]
Length = 299
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 157/277 (56%), Gaps = 15/277 (5%)
Query: 25 KQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAI 83
K +++ L P P LH+AMRY+ L GGKR+ L A+ + G +V A A+
Sbjct: 22 KSLSDLLPSEKQFPEP--LHQAMRYAVLDGGKRIRPLLVFATGALFGAPVAVMTQTASAV 79
Query: 84 ELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAII----- 138
E++ ++I DD+PC+DND LRRGKP+ H FGEA A+LA AL A ++ I
Sbjct: 80 EMIHAYSLIHDDMPCMDNDVLRRGKPTLHVQFGEAMALLAGDALQAQAFIVLSKIDDDAK 139
Query: 139 ----KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVII 194
+ + ++ A GS G+ GQ +D++S GK +S+ +L +HR KTG ++AS++ G
Sbjct: 140 LVAERLRILSEASGSLGMCGGQAIDLDSVGKNLSIDQLEQMHRLKTGALLKASVMLGAFS 199
Query: 195 GG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGI 252
+ EEI + + K +G+A+Q+ +DI+DV + KT G+D K TY L+G+
Sbjct: 200 AKRPDPEEITALDAYAKAIGLAFQVVDDILDVTADTAILGKTAGKDASDHKPTYVSLLGL 259
Query: 253 DGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ ++K A++L +A + + F +A L L + +V
Sbjct: 260 ENAEKLAEKLRCQAHEAIEAFG-KKAVYLHELADLVV 295
>gi|313896583|ref|ZP_07830132.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974768|gb|EFR40234.1| geranyltranstransferase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 295
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 152/261 (58%), Gaps = 17/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +M YSL GGKRL L +A+ + +G + ++ ACA+E++ T ++I DDLP +DN
Sbjct: 34 LRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN------------INSAVGS 149
DD RRGK +NHK + E TAILA AL LA I++ ++ I+ + G+
Sbjct: 94 DDYRRGKLTNHKAYDEGTAILAGDALLTLAF--TVILRQQDVPAERLLRIVDEISRSAGA 151
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E + +S+ EL +H KTG A++ SG I+ G +E+++ + +
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELQRVHMGKTGALFRAALRSGAILAGASEQQLAALTTYA 211
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DV+G+ E + + G D K+TY L +D ++ A++ + A
Sbjct: 212 DHFGLAFQITDDILDVVGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVESAVD 271
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L F AA L LV ++V
Sbjct: 272 ALHIFGD-EAAFLRELVLYLV 291
>gi|344337348|ref|ZP_08768282.1| Geranyltranstransferase [Thiocapsa marina 5811]
gi|343802301|gb|EGV20241.1| Geranyltranstransferase [Thiocapsa marina 5811]
Length = 297
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 163/281 (58%), Gaps = 19/281 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLP--HPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+++++A ++ LD +P P LHEAMRY+ L GGKR+ L A+ E +G
Sbjct: 6 LDDFRARCRARVEATLDALLPPASVQPVRLHEAMRYTVLGGGKRIRPLLAYAAGEALGVD 65
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ ACA+EL+ ++I DDLP +D+DDLRRG+P+ H+ F EATAILA AL LA
Sbjct: 66 PVLLDRPACAVELIHAYSLIHDDLPAMDDDDLRRGRPTCHRAFDEATAILAGDALQTLAF 125
Query: 133 QHIA----------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
Q +A I ++ A G+ G+ GQ +D+ +EG + ++ L IH HKTG
Sbjct: 126 QALAESPGLDAEKRIAMVASLARASGARGMVGGQALDLAAEGSVLDVAMLEHIHIHKTGA 185
Query: 183 FIEASIVSGVII-GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMM 240
I A++ G++ + + ER+ + K +G+A+Q+ +D++DV G ++ KT GRD +
Sbjct: 186 LIRAAVQMGILAHDAPDPDHAERLDRYAKCIGLAFQIQDDVLDVEGDTDLIGKTAGRDQV 245
Query: 241 RDKATYPKLVGIDGSKKHAKELIAEAKQELAYF----DPTR 277
+KATYP LVG+ +K+ A LI +A + + F DP R
Sbjct: 246 LEKATYPALVGLPEAKEMAAALIGDALESIGVFSSGADPLR 286
>gi|451942599|ref|YP_007463236.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901986|gb|AGF76448.1| geranyltranstransferase [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 300
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 148/274 (54%), Gaps = 14/274 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E+ + P IL +AMRY L GGKRL L I S + ++ +ACA+E + ++
Sbjct: 28 ESGEIARPEILLKAMRYGVLNGGKRLRPFLVIQSGALFDIPPEHSLDVACALECVHCYSL 87
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKA 140
I DDLP +DND LRRGKP+ HK F EATAILA AL A + IA I
Sbjct: 88 IHDDLPAMDNDTLRRGKPTVHKAFDEATAILAGNALLTFAFEIIAHKACALPFETRIKLM 147
Query: 141 KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
+ + G G+ GQ++DI +E + + R KT I + +G IIG +E
Sbjct: 148 TALAQSAGLGGMIGGQMLDIEAEKTPQESINIMTLQRMKTAALISFACQAGAIIGNAPQE 207
Query: 201 EIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHA 259
+E++ FG Y+G+A+QL +D++DV + E+ KT G+D KAT+ +L GI ++K
Sbjct: 208 LMEKLAAFGTYLGLAFQLTDDLLDVTANSEVLGKTAGKDETAQKATFVRLYGIQETQKKR 267
Query: 260 KELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
ELIA+A+ L F +A PL +F + N
Sbjct: 268 DELIAKAESLLRPFG-EKAKPLHQAAHFSATRKN 300
>gi|339484559|ref|YP_004696345.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
gi|338806704|gb|AEJ02946.1| Polyprenyl synthetase [Nitrosomonas sp. Is79A3]
Length = 297
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 149/264 (56%), Gaps = 15/264 (5%)
Query: 40 PAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P LH+AMRYS L GGKR+ L A+ E+ M +A A+EL+ +++ DDLPC
Sbjct: 31 PERLHKAMRYSVLGGGKRVRPLLSFAAGELALADTDRVMVVAAAVELIHAYSLVHDDLPC 90
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAV 147
+D+D LRRGKP+ H F EATA+L +L LA + +A + + A
Sbjct: 91 MDDDILRRGKPTCHIEFDEATALLTGDSLQTLAFELLAEKCLADEPGTQLEMIAQLAVAA 150
Query: 148 GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMR 206
GS G+A GQ D++S GK +SL EL F+H HKTG I A+++ G N ++ ++
Sbjct: 151 GSRGMAGGQAFDLDSVGKTLSLPELEFMHIHKTGALIRAAVMLGARCNNRLNNNQLGKLD 210
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+F K VG+A+Q+ +D++D + KT G+D +K TY ++GI +++ A++L +
Sbjct: 211 HFAKCVGLAFQVVDDLLDTEATTATLGKTAGKDAENNKPTYVSILGISQARELAEKLQHD 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A Q L F A L + +FI+
Sbjct: 271 AYQALDSFGEA-ALRLRQVTDFII 293
>gi|395788884|ref|ZP_10468423.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
gi|395431749|gb|EJF97761.1| hypothetical protein ME9_00140 [Bartonella taylorii 8TBB]
Length = 300
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 146/270 (54%), Gaps = 14/270 (5%)
Query: 37 LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
+ P L +AMRY L GGKRL L + S + ++ +ACA+E + ++I DD
Sbjct: 32 IARPETLIKAMRYGVLNGGKRLRPFLVMQSAALFDIPAEHSLDIACALECVHCYSLIHDD 91
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNIN 144
LP +DND LRRGKP+ H+ F EATAILA AL A + IA I +
Sbjct: 92 LPAMDNDTLRRGKPTVHRAFDEATAILAGNALLTFAFEIIAHKASTLPFDTRIKLVTALA 151
Query: 145 SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIER 204
+ G G+ GQ++D+ +E K + + + R KT I + +G IIG ++E E+
Sbjct: 152 QSAGIGGMVGGQMLDLEAEKKPQESTNIITLQRMKTAALISFACQAGAIIGNASKEFTEK 211
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ FG Y+G+A+QL +D++DV E+ KT G+D KAT+ +L GI+ ++K ELI
Sbjct: 212 LAAFGTYLGLAFQLTDDLLDVTAKSEILGKTVGKDKTAHKATFVRLYGIEETQKKRDELI 271
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A+A+ L F +A PL F + N
Sbjct: 272 AKAEVLLHPFG-AKAKPLQQAARFSATRKN 300
>gi|337278944|ref|YP_004618415.1| Geranyltranstransferase [Ramlibacter tataouinensis TTB310]
gi|334730020|gb|AEG92396.1| Geranyltranstransferase (Farnesyl-diphosphate synthase)-like
protein [Ramlibacter tataouinensis TTB310]
Length = 309
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 154/270 (57%), Gaps = 14/270 (5%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMI 69
P+ F++ + + + +AL V PA L +AMRY+ L GGKRL L +A+ E +
Sbjct: 13 PQGFELRGWSEQRLALVEQALSRWVVADAPAGLGDAMRYAVLDGGKRLRPLLVLAAAEAV 72
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G+++ A+ ACA+EL+ +++ DD+PC+DND LRRGKP+ H FG+A A+LA AL
Sbjct: 73 RGNEAAALRAACAVELIHAYSLVHDDMPCMDNDVLRRGKPTVHVKFGQAQALLAGDALQA 132
Query: 130 LAMQHI---------AIIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
LA + + A ++A + + A G EG+A GQ +D+ S G+++ +L +HR
Sbjct: 133 LAFELLAPEDEDGVSATVQAALCRLLARAAGHEGMAGGQAIDLASVGQQLDEPQLREMHR 192
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-G 236
KTG + S++ G G + +G +G+A+Q+ +DI+DV KT G
Sbjct: 193 RKTGALLRGSVMMGAACGDIGTAARAALSRYGAALGLAFQVVDDILDVTADSATLGKTAG 252
Query: 237 RDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+D +DK TY L+G++ S+ A L+ EA
Sbjct: 253 KDAAQDKPTYVSLLGLERSRALAAGLLDEA 282
>gi|402303522|ref|ZP_10822615.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
gi|400378360|gb|EJP31217.1| putative geranyltranstransferase [Selenomonas sp. FOBRC9]
Length = 295
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 152/261 (58%), Gaps = 17/261 (6%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +M YSL GGKRL L +A+ + +G + ++ ACA+E++ T ++I DDLP +DN
Sbjct: 34 LRASMAYSLMAGGKRLRPILLMAAADAVGADGTKFITAACALEMIHTYSLIHDDLPAMDN 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNI------------NSAVGS 149
DD RRGK +NHK + E TAILA AL LA I++ +++ + A G+
Sbjct: 94 DDYRRGKLTNHKAYDEGTAILAGDALLTLAF--TMILRQQDVPAERLLRVVDEMSRAAGA 151
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
EG+ GQ++D+ +E + +S+ EL +H KTG A++ SG I+ G +E+++ + +
Sbjct: 152 EGMVGGQMLDLEAENRRISMEELRRVHMGKTGALFRAALRSGAILAGASEQQLAALTAYA 211
Query: 210 KYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
+ G+A+Q+ +DI+DVIG+ E + + G D K+TY L +D ++ A++ + A
Sbjct: 212 DHFGLAFQITDDILDVIGTAEDIGKPVGSDEKNHKSTYVTLTSLDEAQSLARQTVERAVD 271
Query: 269 ELAYFDPTRAAPLDHLVNFIV 289
L F AA L LV ++V
Sbjct: 272 ALHIFGD-EAAFLRELVLYLV 291
>gi|419839117|ref|ZP_14362535.1| polyprenyl synthetase [Haemophilus haemolyticus HK386]
gi|386909828|gb|EIJ74492.1| polyprenyl synthetase [Haemophilus haemolyticus HK386]
Length = 296
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 155/268 (57%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L EAM+Y+L GGKR+ L A+ +M+G + A AIE + ++I DDLP
Sbjct: 29 HNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+DND LRRG P+ H F EATAILA AL A + + K NI+S
Sbjct: 89 AMDNDSLRRGHPTCHIQFDEATAILAGDALQSFAFEMLT--KTPNISSEQKLALVQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +E+
Sbjct: 147 GAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L FI++
Sbjct: 267 YQSALSELEKI-PFDTTTLRALAEFIIT 293
>gi|421618908|ref|ZP_16059875.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
gi|409779088|gb|EKN58762.1| geranyltranstransferase [Pseudomonas stutzeri KOS6]
Length = 295
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ +Y+ ++++ L+ P P + L++AMRYS + GGKR+ L A+CE + G
Sbjct: 2 IGDYQKSCQQRVDGCLEALFVAPQPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALNGD 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 KANADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHIAIIKAKNINS------------AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + ++ A G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 122 EAMAQDRHNPPDATLRLRMFSVLARAAGPAGMVGGQAIDLGSVGLKLDRDALELMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IEAS+ G + G + + + + + + +G+A+Q+ +DI+DV + + + G D
Sbjct: 182 GALIEASVQLGALASGHADADSLAALSQYARAIGLAFQVQDDILDVESDTATLGKHQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G+D +K +A EL +A L FD A PL L +IV N
Sbjct: 242 IARDKPTYPALLGMDAAKVYASELRDQALHALQPFDEA-AEPLRELARYIVERRN 295
>gi|374672903|dbj|BAL50794.1| geranyltranstransferase [Lactococcus lactis subsp. lactis IO-1]
Length = 293
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 149/254 (58%), Gaps = 12/254 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLP 97
P L E+ +YSL GGKR+ L + E S A +A A+E++ T ++I DDLP
Sbjct: 30 PTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLP 89
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIKAKNINSAVG 148
+DNDD RRG+ +NHK F EATAILA L I + + + A G
Sbjct: 90 AMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTADLSAEIIVALTRELAFASG 149
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
S G+ AGQI+D+ EGKE++L+E+ IHR KTG+ + V+ I+ + +E+E++R
Sbjct: 150 SYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLRQV 209
Query: 209 GKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ +G+++Q+ +DI+DV + E+ + G+D++ +K+TY +G++G+KK E ++E K
Sbjct: 210 GQILGLSFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEGAKKSLTENLSEVK 269
Query: 268 QELAYFDPTRAAPL 281
+ L T ++ +
Sbjct: 270 KLLTDLSVTDSSEI 283
>gi|355639277|ref|ZP_09051079.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|421168156|ref|ZP_15626265.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
gi|354832132|gb|EHF16133.1| hypothetical protein HMPREF1030_00165 [Pseudomonas sp. 2_1_26]
gi|404531451|gb|EKA41405.1| geranyltranstransferase [Pseudomonas aeruginosa ATCC 700888]
Length = 295
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 163/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ ALD P + L+EAMRYS + GGKR+ L A+CE +GG+
Sbjct: 2 IAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGA 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A + ACA+EL+ +++ DDLP +D+DDLRRG+P+ H+ F EATAILA L LA
Sbjct: 62 PQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAF 121
Query: 133 QHIAIIKA------------KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + + A GS G+ GQ +D+ S G + + L +HRHKT
Sbjct: 122 EVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKT 181
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G IEAS+ G + G + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 182 GALIEASVRLGALASGRAEPAALAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+K TYP L+G++ +K +A EL +A L F P+ A PL L +IV N
Sbjct: 242 QAHNKPTYPALLGLEAAKGYALELRDQALAALDGFPPS-ADPLRQLARYIVERRN 295
>gi|417788058|ref|ZP_12435741.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
gi|334308235|gb|EGL99221.1| octaprenyl-diphosphate synthase [Lactobacillus salivarius NIAS840]
Length = 277
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLPCL 99
IL EAMRYS+ GGKR+ L + S +G S + +A ++ELL T ++I DDLP +
Sbjct: 13 ILKEAMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEM 72
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSE 150
DND+LRRGKP+NHK FG+A A+LA L + + +++ N + A G +
Sbjct: 73 DNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQ 132
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ +GQ DI E K+ +L EL +H KTG + + V+G I+ ++ ++E +R +G+
Sbjct: 133 GMVSGQTDDILGENKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGE 192
Query: 211 YVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
G+A+Q+++D++DVIG + + + +D + +K TYP L+G+ G+K+ E++
Sbjct: 193 NFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL 246
>gi|419955642|ref|ZP_14471767.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
gi|387967555|gb|EIK51855.1| geranyltranstransferase [Pseudomonas stutzeri TS44]
Length = 296
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 166/291 (57%), Gaps = 18/291 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ +Y+ ++++ L+ P P + L++AMRYS + GGKR+ L A+CE + G
Sbjct: 3 IGDYQKDCQQRVDSCLEALFAPPRPQLERLYQAMRYSVMNGGKRVRPLLVYAACEALRGD 62
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
++ A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 63 RATADGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 122
Query: 133 QHIAIIKAKNINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ +A + ++A+ G G+ GQ +D+ S G ++ L +HRHKT
Sbjct: 123 EAMAEARHNPPDAALRLRMFAVLARAAGPAGMVGGQAIDLGSVGLKLDREALELMHRHKT 182
Query: 181 GKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDV-IGSPEMREKTGRD 238
G IEAS+ G + G + + + + ++ + +G+A+Q+ +DI+DV + + + G D
Sbjct: 183 GALIEASVQLGALASGHADADSLGALSHYARGIGLAFQVQDDILDVESDTATLGKHQGAD 242
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+ RDK TYP L+G+D +K +A EL +A L FD A PL L FIV
Sbjct: 243 IARDKPTYPALLGLDEAKAYAIELRDQALHALRPFD-IAAEPLRELARFIV 292
>gi|332288106|ref|YP_004418958.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
gi|330431002|gb|AEC16061.1| putative geranyltranstransferase [Gallibacterium anatis UMN179]
Length = 295
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 154/267 (57%), Gaps = 14/267 (5%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
PA L +AMRYSL GGKR+ L A+ M+G + +A AIE + ++I DDLP
Sbjct: 30 PAPLADAMRYSLLLGGKRIRPFLVYATGRMLGVDLAKLDHIAGAIECIHCYSLIHDDLPA 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGS 149
+DND LRR P+ H F EATAILA AL A + +A I++ + + +A G+
Sbjct: 90 MDNDTLRRNNPTCHIAFDEATAILAGDALQSYAFELLAKSPIADQQKILQFQLLANASGA 149
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIERMRN 207
EG+ GQ +D+ SE K++ L+EL IH++KTG I A+++ G NE+ +++ +
Sbjct: 150 EGMCLGQSLDLISENKQIGLAELERIHKNKTGALITAAVLLGFYCSSYYQNEQIKQKLIS 209
Query: 208 FGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
F +G+A+Q+ +DI+D+ S E+ + G D+ K+TYP+L+G+ +K+ A L A
Sbjct: 210 FSAAIGLAFQVQDDILDITSSNEELGKNAGSDLKAHKSTYPQLLGLAQAKEKASALYYSA 269
Query: 267 KQELAYFDPTRAAPLDHLVNFIVSFGN 293
K L+ + +A L L FIV N
Sbjct: 270 KSILSELEFDTSA-LAALAEFIVKRRN 295
>gi|238754213|ref|ZP_04615570.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
gi|238707460|gb|EEP99820.1| Geranyltranstransferase [Yersinia ruckeri ATCC 29473]
Length = 305
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 27/305 (8%)
Query: 11 PKFFQVNEYKALKAKQINEALDEAV-PLP-HPAILHEAMRY-SLPGGKRLMSTLCIASCE 67
P F N+ A+ ++ N AL + PLP + + L +AMRY +L GGKRL L A+ +
Sbjct: 6 PVLF--NQQLAVYQQRANNALLSFIAPLPFNHSDLVQAMRYGTLLGGKRLRPYLVYATGQ 63
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
M G + + A A+E + +++ DDLP +DNDDLRRG+P+ H FGEA AILA AL
Sbjct: 64 MFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDAL 123
Query: 128 HCLAMQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFI 175
LA +A I + +A G G+ GQ +D+ +E +++SL+EL I
Sbjct: 124 QTLAFSILADAPMPDVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTELEKI 183
Query: 176 HRHKTGKFIEASI-VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMRE 233
HRHKTG I ++ ++ + G + ++ + +G+A+Q+ +DI+DVIG + ++ +
Sbjct: 184 HRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTAKIGK 243
Query: 234 KTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQEL-----AYFDPTRAAPLDHLVNFI 288
+ G D K+TYP L+G++ ++ A +L EA L +D T L L +FI
Sbjct: 244 RQGADQQLGKSTYPALLGLEAAQTKAWDLYQEALAALDTLAEQSYDTTS---LRALASFI 300
Query: 289 VSFGN 293
+ N
Sbjct: 301 IERDN 305
>gi|293604269|ref|ZP_06686676.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
gi|292817146|gb|EFF76220.1| geranyltranstransferase [Achromobacter piechaudii ATCC 43553]
Length = 303
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 163/293 (55%), Gaps = 24/293 (8%)
Query: 18 EYKALKAKQINEALDEAVPLPH--PAILHEAMRYS-LPGGKRLMSTLCIAS---CEMIGG 71
E+ + + + + LD+ +P P LHEAMRY+ L GGKR+ + + A+ C + G
Sbjct: 10 EWLQGRVRHVEDVLDDLMPPAEVLPVRLHEAMRYAVLGGGKRVRAAMVYAAGQACPVSGS 69
Query: 72 SQSVAMSM---ACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALH 128
++ S+ A A+EL+ +++ DDLPC+DND LRRG+P+ H F EATA+LA AL
Sbjct: 70 VLAIEASLDRAAAAVELIHAYSLVHDDLPCMDNDTLRRGRPTTHVQFDEATAMLAGDALQ 129
Query: 129 CLAMQHIA--------IIKA-KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
LA +A I++A +++ A GS+G+A GQ +D+ S G +S EL +H K
Sbjct: 130 PLAFDLLASMPIAPALIVQATQSLARAAGSQGMAGGQAIDLLSVGHSLSRDELQTMHSMK 189
Query: 180 TGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
TG + S+ G I+ G + + + + + +G+A+Q+ +DI+DV KT G+D
Sbjct: 190 TGAMLACSVALGGIVAGASSASRQALDAYAQAMGLAFQVVDDILDVTADTASLGKTPGKD 249
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLD--HLVNFIV 289
+K TY L+G+ ++ A+EL A+ A +P A L L +FIV
Sbjct: 250 AAENKPTYVSLLGLSEARAFAEELRVAAQ---AALEPLGDAGLRLAQLADFIV 299
>gi|330830903|ref|YP_004393855.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|406675879|ref|ZP_11083065.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
gi|423208452|ref|ZP_17195006.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|328806039|gb|AEB51238.1| Geranyltranstransferase [Aeromonas veronii B565]
gi|404618297|gb|EKB15217.1| hypothetical protein HMPREF1169_00524 [Aeromonas veronii AER397]
gi|404626102|gb|EKB22912.1| hypothetical protein HMPREF1170_01273 [Aeromonas veronii AMC35]
Length = 296
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 161/292 (55%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++ + L ++I++ L E++P P L +AM Y L GGKR+ L A EM+G
Sbjct: 3 LDHFSRLHRQRIDDCLSAQLESLPAMAPR-LRDAMSYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KSELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG+++SL+EL +HRHK
Sbjct: 122 FSILADHPMPDSLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + ++ + ++ + +G+A+Q+ +DI+D+ G + + + G
Sbjct: 182 TGALIECAVALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ +K+TYP L+G++ +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLALEKSTYPALLGLENARELARELHGKALTALQSL-PYNTDILEAFADYII 292
>gi|423205490|ref|ZP_17192046.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
gi|404624031|gb|EKB20876.1| hypothetical protein HMPREF1168_01681 [Aeromonas veronii AMC34]
Length = 296
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 161/292 (55%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++ + L ++I++ L E++P P L +AM Y L GGKR+ L A EM+G
Sbjct: 3 LDHFSRLHRQRIDDCLSAQLESLPAMAPR-LRDAMSYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KSELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG+++SL+EL +HRHK
Sbjct: 122 FSILADHPMPDTLMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQISLAELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + ++ + ++ + +G+A+Q+ +DI+D+ G + + + G
Sbjct: 182 TGALIECAVALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ +K+TYP L+G++ +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLALEKSTYPALLGLENARELARELHGKALTALQSL-PYNTDILEAFADYII 292
>gi|221310351|ref|ZP_03592198.1| hypothetical protein Bsubs1_13321 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314675|ref|ZP_03596480.1| hypothetical protein BsubsN3_13242 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319598|ref|ZP_03600892.1| hypothetical protein BsubsJ_13163 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323874|ref|ZP_03605168.1| hypothetical protein BsubsS_13292 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767538|ref|NP_390308.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|321311912|ref|YP_004204199.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|402776690|ref|YP_006630634.1| geranyltranstransferase [Bacillus subtilis QB928]
gi|418032399|ref|ZP_12670882.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|428279913|ref|YP_005561648.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|430759106|ref|YP_007209030.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452915229|ref|ZP_21963855.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
gi|251757288|sp|P54383.2|ISPA_BACSU RecName: Full=Farnesyl diphosphate synthase; Short=FPP synthase;
AltName: Full=(2E,6E)-farnesyl diphosphate synthase;
AltName: Full=Geranyltranstransferase
gi|225185166|emb|CAB14359.2| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
168]
gi|291484870|dbj|BAI85945.1| hypothetical protein BSNT_03621 [Bacillus subtilis subsp. natto
BEST195]
gi|320018186|gb|ADV93172.1| geranyltranstransferase [Bacillus subtilis BSn5]
gi|351471262|gb|EHA31383.1| hypothetical protein BSSC8_18260 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481870|gb|AFQ58379.1| Geranyltranstransferase [Bacillus subtilis QB928]
gi|407959673|dbj|BAM52913.1| geranyltranstransferase [Bacillus subtilis BEST7613]
gi|407965248|dbj|BAM58487.1| geranyltranstransferase [Bacillus subtilis BEST7003]
gi|430023626|gb|AGA24232.1| Geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115577|gb|EME05973.1| farnesyl diphosphate synthase [Bacillus subtilis MB73/2]
Length = 296
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 151/246 (61%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + +++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F ++G+ +Q+ +DI+D+ GS E + ++ G D DK+TYP L+ ++G+K
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 IKEAKR 272
>gi|89895097|ref|YP_518584.1| hypothetical protein DSY2351 [Desulfitobacterium hafniense Y51]
gi|423073546|ref|ZP_17062285.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
gi|89334545|dbj|BAE84140.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361855624|gb|EHL07587.1| putative geranyltranstransferase [Desulfitobacterium hafniense DP7]
Length = 289
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 151/266 (56%), Gaps = 15/266 (5%)
Query: 37 LPHP-AILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
P P L E+M YSL GGKR+ L +A+ +GG + CA+EL+ T ++I D
Sbjct: 20 FPWPTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHD 79
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNI 143
DLP +DNDD RRG+ +NHKVFGE AILA AL A + IA + + +
Sbjct: 80 DLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELIAQPMSGVEPQRQLRAIREV 139
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ++D+ +E K+++L+EL +HR KTG + + G I+ GG EE+IE
Sbjct: 140 AQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIE 199
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ ++ + +G+A+Q+ +DI+D+ E K D+ + K+TYP L+G+ G+K K
Sbjct: 200 ALTSYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAKLELKIK 259
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFI 288
EA LA RA L L ++I
Sbjct: 260 TDEAHAALAVLG-ERAGFLHELADYI 284
>gi|385840231|ref|YP_005863555.1| geranyltranstransferase [Lactobacillus salivarius CECT 5713]
gi|300214352|gb|ADJ78768.1| Geranyltranstransferase [Lactobacillus salivarius CECT 5713]
Length = 305
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLPCL 99
IL E+MRYS+ GGKR+ L + S +G S + +A ++ELL T ++I DDLP +
Sbjct: 41 ILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEM 100
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSE 150
DND+LRRGKP+NHK FG+A A+LA L + + +++ N + A G +
Sbjct: 101 DNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQ 160
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ +GQ DI E K+ +L EL +H KTG + + V+G I+ ++ ++E +R +G+
Sbjct: 161 GMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGE 220
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
G+A+Q+++D++DVIG + + + +D + +K TYP L+GI G+K+ E++
Sbjct: 221 NFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGIQGTKEALVEVL 274
>gi|427405648|ref|ZP_18895853.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
gi|425708489|gb|EKU71528.1| hypothetical protein HMPREF9161_00213 [Selenomonas sp. F0473]
Length = 291
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 154/271 (56%), Gaps = 21/271 (7%)
Query: 37 LPHPAILHEAMR----YSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
L H +L +R YSL GGKRL L +A+ + +G ++ ACA+E++ T ++
Sbjct: 20 LDHTDVLDRKLRASMAYSLMAGGKRLRPILLMAAADAVGADGMKFITAACALEMIHTYSL 79
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIK 139
I DDLP +DNDD RRGK +NHK++G+ AILA AL LA +H+ ++
Sbjct: 80 IHDDLPAMDNDDYRRGKLTNHKIYGDGIAILAGDALLTLAFTVILRQRGVPVDRHLRVV- 138
Query: 140 AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
I+ A G+EG+ GQ++D+ +E + +SL EL IH KTG A++ SG ++ G +E
Sbjct: 139 -DEISRAAGAEGMVGGQVLDLEAENRRISLEELRRIHMGKTGALFRAALRSGAVLAGASE 197
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKH 258
E++ + + + G+A+Q+ +DI+DV+G+ E + + G D K+TY L + +++
Sbjct: 198 EQLAALTAYADHFGLAFQITDDILDVVGNAEDIGKPVGSDEKNRKSTYVTLTSLREAREL 257
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
A+ +A L F AA L LV ++V
Sbjct: 258 AQRTADDAVAALDIF-GEEAAFLRELVTYLV 287
>gi|219669510|ref|YP_002459945.1| polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
gi|219539770|gb|ACL21509.1| Polyprenyl synthetase [Desulfitobacterium hafniense DCB-2]
Length = 290
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 151/266 (56%), Gaps = 15/266 (5%)
Query: 37 LPHPA-ILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQD 94
P P L E+M YSL GGKR+ L +A+ +GG + CA+EL+ T ++I D
Sbjct: 21 FPWPTGTLAESMNYSLSAGGKRIRPVLALAAAHAVGGDCEDILPAVCALELIHTYSLIHD 80
Query: 95 DLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNI 143
DLP +DNDD RRG+ +NHKVFGE AILA AL A + +A + + +
Sbjct: 81 DLPAMDNDDYRRGRLANHKVFGEGQAILAGDALLTYAFELLAQPMSGVDSQRQLRAVREV 140
Query: 144 NSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
A G EG+ GQ++D+ +E K+++L+EL +HR KTG + + G I+ GG EE+IE
Sbjct: 141 AQAAGPEGMVGGQMLDLEAEEKQLNLAELEQVHRLKTGAILVVAARLGAILAGGTEEKIE 200
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ ++ + +G+A+Q+ +DI+D+ E K D+ + K+TYP L+G+ G+K K
Sbjct: 201 ALTSYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHKSTYPSLMGLAGAKLELKIK 260
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFI 288
EA LA RA L L ++I
Sbjct: 261 TDEAHAALAVLG-ERAGFLHELADYI 285
>gi|392553125|ref|ZP_10300262.1| geranyltranstransferase [Pseudoalteromonas spongiae UST010723-006]
Length = 296
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 147/265 (55%), Gaps = 16/265 (6%)
Query: 26 QINEALDEAVPLPHPA--ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
+I E L +P H L A RYSL GGKRL L + E+ + +ACA
Sbjct: 14 RIEENLSALIPASHHTDEKLVAACRYSLLNGGKRLRPILVYLTGELFNADNADLDRIACA 73
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------ 136
IE + + +++ DDLP +D+D+LRRG+P+ H + EATAIL AL CLA + I
Sbjct: 74 IECIHSYSLVHDDLPAMDDDELRRGRPTCHIAYDEATAILVGDALQCLAFETITESQFNC 133
Query: 137 ------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVS 190
+ + +A G G+ GQ +DI + ++L++L +H+ KTG ++++I
Sbjct: 134 TTVNNQLKIVNTLANASGLLGMCGGQALDIAATDSVITLTQLEQVHKLKTGALLKSAIKM 193
Query: 191 GVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKL 249
G + G NE EI + + + +G+A+Q+ +DI+DV G K G D+ +KATYP L
Sbjct: 194 GALAGNANELEIAALARYAEAIGLAFQVQDDILDVEGDTHTLGKPQGSDIEANKATYPAL 253
Query: 250 VGIDGSKKHAKELIAEAKQELAYFD 274
+GI+G+K+ A+ L+ +A L+ D
Sbjct: 254 LGIEGAKEKAQNLVNQAIDALSEID 278
>gi|295397723|ref|ZP_06807795.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
gi|294974052|gb|EFG49807.1| geranyltranstransferase [Aerococcus viridans ATCC 11563]
Length = 297
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 135/230 (58%), Gaps = 13/230 (5%)
Query: 39 HPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
P L E+M YSL GGKR+ L +A+ + + + ++ A A+E + T ++I DDLP
Sbjct: 29 QPGQLKESMVYSLNTGGKRIRPMLLLATLKALNVDIQIGLNTAVALEYIHTYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-IIKAKNINS----------A 146
+DNDD RRGK +NHK F EATAILA +L + IA K +N+ + A
Sbjct: 89 AMDNDDYRRGKLTNHKAFDEATAILAGDSLLTDSFALIANDSKIQNMQTKVNLIAELSKA 148
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMR 206
GS G+ AGQI+D++SEGK+++L L IH+HKTG+ I ++ +G I + E +
Sbjct: 149 AGSNGMIAGQILDVDSEGKQINLRTLQDIHKHKTGELIRYAVFAGGQIAQASSEVATLLD 208
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKTGR-DMMRDKATYPKLVGIDGS 255
+F G+AYQ+ ND+ +V+ + E R K D DK TYP ++G +G+
Sbjct: 209 DFAWAYGIAYQIQNDLQEVMWTDEARGKLNHSDAELDKNTYPSIMGTNGA 258
>gi|440781958|ref|ZP_20960186.1| geranyltranstransferase [Clostridium pasteurianum DSM 525]
gi|440220676|gb|ELP59883.1| geranyltranstransferase [Clostridium pasteurianum DSM 525]
Length = 289
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 151/236 (63%), Gaps = 12/236 (5%)
Query: 43 LHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
++EAM+YS+ GGKR+ L + EM + +++ACAIE++ T ++I DDLPC+D+
Sbjct: 28 IYEAMKYSIDIGGKRVRPMLHCLTYEMFNENYREVIAVACAIEMIHTYSLIHDDLPCMDD 87
Query: 102 DDLRRGKPSNHKVFGEATAILACQAL----------HCLAMQHIAIIKAKNINSAVGSEG 151
DDLRRG P+NHK+FGEA A+LA L +C ++ K I+ + G+EG
Sbjct: 88 DDLRRGHPTNHKIFGEALAVLAGDGLLNEAMSLMFDYCKDRGKNELLACKIISDSAGAEG 147
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ GQ++DI SEGK++S L+++HR KTG+ I+ASI+SG IIG ++ EI+++ +FG
Sbjct: 148 MIGGQVVDILSEGKKISYETLSYMHRKKTGELIKASILSGAIIGRASDREIDKLSDFGSK 207
Query: 212 VGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+A+Q+ +DI+DV+G+ E M + D+ +K + G++ K +EL E
Sbjct: 208 LGLAFQIKDDILDVVGNEEVMGKPVNSDIDNNKTNFISTFGLEDCKNKCRELTKEC 263
>gi|377578760|ref|ZP_09807735.1| farnesyl diphosphate synthase [Escherichia hermannii NBRC 105704]
gi|377539843|dbj|GAB52900.1| farnesyl diphosphate synthase [Escherichia hermannii NBRC 105704]
Length = 299
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 162/287 (56%), Gaps = 21/287 (7%)
Query: 23 KAKQINEALDE---AVPLPHPAILHEAMRY-SLPGGKRLMSTLCIASCEMIGGSQSVAMS 78
+A++ +AL + A+P + ++ EAM Y +L GGKRL L A+ EM S +
Sbjct: 10 QAERATDALRQFISALPFQNTPLV-EAMHYGTLLGGKRLRPFLVYATGEMFAVSPQALDA 68
Query: 79 MACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA------- 131
A AIE + +++ DDLP +DNDDLRRG+P+ H FGEA AILA AL LA
Sbjct: 69 PAAAIECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDALQTLAFSILSDA 128
Query: 132 -MQHIAIIKAKNINS----AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEA 186
M +A+ ++ S A G G+ GQ +D+++EGK+VSL L IHRHKTG I A
Sbjct: 129 PMPGVALADRLSLISELAMASGIAGMCGGQALDLDAEGKQVSLDALERIHRHKTGALIRA 188
Query: 187 SIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKA 244
++ G + G E + + + + +G+A+Q+ +DI+DV+G + + ++ G D K+
Sbjct: 189 AVRMGALCAGEAGREALPLLDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQHLGKS 248
Query: 245 TYPKLVGIDGSKKHAKELIAEAKQELAYFDPTR--AAPLDHLVNFIV 289
TYP L+G++ +++ A+ L +A L + L+ L N+I+
Sbjct: 249 TYPALLGLEQAREKAQALCDDALAALRELSSQQMDTRTLEALANYII 295
>gi|257869058|ref|ZP_05648711.1| geranyltranstransferase [Enterococcus gallinarum EG2]
gi|257803222|gb|EEV32044.1| geranyltranstransferase [Enterococcus gallinarum EG2]
Length = 294
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 142/236 (60%), Gaps = 12/236 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L ++M YS+ GGKR+ L A+ S ++ + A A+E++ T ++I DDLP +D
Sbjct: 29 LKDSMLYSIHAGGKRIRPLLLTATVASFHKSMTLGVYQTAAALEMIHTYSLIHDDLPAMD 88
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGSEG 151
+D LRRGKP+NHKV+GEA AILA L A Q ++ I+ + ++ G+ G
Sbjct: 89 DDALRRGKPTNHKVYGEALAILAGDGLLTAAFQLLSLADLEPDKKILLLQQLSHTAGTAG 148
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E ++++L EL IH KTG+ I ++++G I+ EE I+ + F ++
Sbjct: 149 MVAGQAADIQGENQQLTLDELISIHERKTGELIRFAVIAGGILADQTEEVIQLLDQFARH 208
Query: 212 VGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+A+Q+ +D++DV + E+ K RD K+TYP L+G+DG+ + K+ + +A
Sbjct: 209 MGLAFQIRDDLLDVTSTTEVLGKIVHRDDALAKSTYPALLGLDGASEALKDELNQA 264
>gi|357049940|ref|ZP_09111154.1| hypothetical protein HMPREF9478_01137 [Enterococcus saccharolyticus
30_1]
gi|355382423|gb|EHG29521.1| hypothetical protein HMPREF9478_01137 [Enterococcus saccharolyticus
30_1]
Length = 297
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 142/236 (60%), Gaps = 12/236 (5%)
Query: 43 LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPCLD 100
L ++M YS+ GGKR+ L A+ S ++ + A A+E++ T ++I DDLP +D
Sbjct: 32 LKDSMLYSIHAGGKRIRPLLLTATVASFHKSMTLGVYQTAAALEMIHTYSLIHDDLPAMD 91
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA---------IIKAKNINSAVGSEG 151
+D LRRGKP+NHKV+GEA AILA L A Q ++ I+ + ++ G+ G
Sbjct: 92 DDALRRGKPTNHKVYGEALAILAGDGLLTAAFQLLSLADLEPDKKILLLQQLSHTAGTAG 151
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKY 211
+ AGQ DI E ++++L EL IH KTG+ I ++++G I+ EE I+ + F ++
Sbjct: 152 MVAGQAADIQGENQQLTLDELISIHERKTGELIRFAVIAGGILADQTEEVIQLLDQFARH 211
Query: 212 VGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIAEA 266
+G+A+Q+ +D++DV + E+ K RD K+TYP L+G+DG+ + K+ + +A
Sbjct: 212 MGLAFQIRDDLLDVTSTTEVLGKIVHRDDALAKSTYPALLGLDGASEALKDELNQA 267
>gi|296126942|ref|YP_003634194.1| polyprenyl synthetase [Brachyspira murdochii DSM 12563]
gi|296018758|gb|ADG71995.1| Polyprenyl synthetase [Brachyspira murdochii DSM 12563]
Length = 294
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 158/294 (53%), Gaps = 26/294 (8%)
Query: 16 VNEYKALKAKQINEALDEA-----VPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMI 69
+ EY ++ K IN ++ + L + I E ++Y L GGKRL L + +CE+
Sbjct: 3 LKEYMNIRLKDINNNIENIFDKSDIELENSFI--EMLKYPLDAGGKRLRPVLTLLACELF 60
Query: 70 GGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHC 129
G A+ A ++EL+ T +++ DDLP +DNDDLRRGKP+ H +GEA AIL L
Sbjct: 61 EGDYKKAVIPAVSLELIHTYSLVHDDLPAMDNDDLRRGKPTTHVKYGEANAILVGDGLLT 120
Query: 130 LAMQHIAIIKAKN---------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
A Q ++ K+ ++ A G G+ GQ +D+ E KE++ L +H KT
Sbjct: 121 HAFQLLSKADVKDSTLRKLLFELSYAAGINGMVMGQFIDLYYEEKEINFDMLKVLHAKKT 180
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDM 239
I ++ G I N+ +IE + +G+ +G+A+Q+ +DI+DVI E KT G+D
Sbjct: 181 AAMIRGAVRLGA-ISSENDNDIENITKYGEAIGLAFQIQDDILDVISDNETLGKTVGKDE 239
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAP----LDHLVNFIV 289
K TY K G++G+KK AK++ +A + Y +P + + L L N+I+
Sbjct: 240 KEGKLTYVKQFGLEGAKKEAKKVTEKA---IEYLNPYKESEAKNILIELANYII 290
>gi|42521829|ref|NP_967209.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
gi|39574359|emb|CAE77863.1| geranyltranstransferase [Bdellovibrio bacteriovorus HD100]
Length = 289
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 163/297 (54%), Gaps = 33/297 (11%)
Query: 15 QVNEYKALKAKQINEALDEAVP---LPHPAILHE---AMRYSLP-GGKRLMSTLCIASCE 67
Q+++ A + + +N+ +++ + LP + + E +M YS GGKR L + E
Sbjct: 6 QIDQEIAARTQAVNQFVEKYLSDMELPAGSAISELRKSMLYSATNGGKRFRPVLSLLVGE 65
Query: 68 MIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQAL 127
+ G + + A A+E++ T ++I DDLPC+DNDD+RRGKP+NHKVFGE A+LA AL
Sbjct: 66 LFGAGKERILPFAAAVEMIHTYSLIHDDLPCMDNDDMRRGKPTNHKVFGEDFALLAGDAL 125
Query: 128 HCLAMQHIAIIKAKN----------INSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHR 177
A IA N ++SA G G+ GQ +D+ + K++SL EL +HR
Sbjct: 126 LTEAFMLIAENYGDNSFLVGHLTRLLSSAAGIRGMVGGQAIDLRAGDKQMSLEELTHLHR 185
Query: 178 HKTGKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKTGR 237
KTG I ++ +I G EIE ++ FG+ +G+A+Q+ +D++D + G+
Sbjct: 186 LKTGALIRVAVEGAAVIAGAKPTEIESLKKFGEGLGLAFQVADDVLD-------HGEKGQ 238
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGNN 294
D+ ++ ++G++G+K + K++ A EL + AP L+ +++SF N
Sbjct: 239 DLR----SFTGILGLEGTKTYLKDVSASTLAEL--HKVSADAP---LLEYLISFNQN 286
>gi|121593453|ref|YP_985349.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
gi|120605533|gb|ABM41273.1| farnesyl-diphosphate synthase [Acidovorax sp. JS42]
Length = 311
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 161/288 (55%), Gaps = 12/288 (4%)
Query: 14 FQVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
F N++ + ++ EAL V PA L EAMRY+ L GGKRL L +A+ +GG
Sbjct: 20 FDFNDWMRAELARVEEALSRWVCHDAPAGLGEAMRYAVLDGGKRLRPLLVLAASHAVGGQ 79
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A+ ACA+EL+ +++ DD+PC+DND +RRGKP+ H FGEA A+LA AL LA
Sbjct: 80 PEAALRAACAVELIHAYSLVHDDMPCMDNDVMRRGKPTVHVRFGEARALLAGDALQALAF 139
Query: 133 QHIA-------IIKA---KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGK 182
+ + ++A + + A G+ G+A GQ +D+ S G ++S +L +H KTG
Sbjct: 140 ELLTPEDGVPLAMQARLCRELAQAAGAAGMAGGQAIDLASVGLQLSEDQLRHMHSLKTGA 199
Query: 183 FIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVI-GSPEMREKTGRDMMR 241
++AS+V G + G ++ + ++G +G+A+Q+ +D++DV S + + G+D
Sbjct: 200 LLQASVVMGAVCGQPTGAALQALTDYGAAMGLAFQVVDDVLDVTQDSATLGKTAGKDAAS 259
Query: 242 DKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
DK TY L+G+ ++ +A L A+A L T L L + +V
Sbjct: 260 DKPTYVSLMGLQSARAYADVLHAQALAALVASGLTDTRALAALADMVV 307
>gi|395788008|ref|ZP_10467584.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
gi|395409790|gb|EJF76375.1| hypothetical protein ME7_00919 [Bartonella birtlesii LL-WM9]
Length = 300
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 148/270 (54%), Gaps = 14/270 (5%)
Query: 37 LPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
+ P +L +AMRY L GGKRL L + S + + +ACA+E + ++I DD
Sbjct: 32 ISRPEMLIKAMRYGVLNGGKRLRPFLVLQSSALFDIPAENVLDVACALECVHCYSLIHDD 91
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA--------IIKAKNINS-- 145
LP +DND LRRGKP+ HK F EATAILA AL A + IA K K I +
Sbjct: 92 LPAMDNDILRRGKPTLHKAFDEATAILAGNALLTFAFETIAHKACTLSFDTKIKLITALA 151
Query: 146 -AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIER 204
A G G+ GQ++DI +E K ++ + R KT I + +G +I ++E E+
Sbjct: 152 QASGLGGMIGGQMLDIEAEKKLQKSKDIITLQRMKTAALISFACQAGALIANASKELTEK 211
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ FG Y+G+A+QL +D++D S E+ KT G+D KAT+ +L GI+ ++K E I
Sbjct: 212 LATFGTYLGLAFQLTDDLLDFTTSSEVLGKTAGKDESAQKATFVRLYGIEETQKKRDEFI 271
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A+A+ L F +A PL H +F + N
Sbjct: 272 AKAETLLLPFG-AKAKPLLHAAHFSATRKN 300
>gi|443631721|ref|ZP_21115901.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347836|gb|ELS61893.1| hypothetical protein BSI_09720 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 296
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 151/246 (61%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + +++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F ++G+ +Q+ +DI+D+ GS E + ++ G D DK+TYP L+ ++G+K
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 INEAKR 272
>gi|89099255|ref|ZP_01172133.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
gi|89086101|gb|EAR65224.1| geranyltranstransferase (farnesyl-diphosphate synthase) [Bacillus
sp. NRRL B-14911]
Length = 298
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 158/271 (58%), Gaps = 15/271 (5%)
Query: 15 QVNEYKALKAKQINEALDEAVP-LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGS 72
Q++ + + K + L+E+V L P +L +AM YSL GGKR+ L A+ + G
Sbjct: 6 QLDSFSEVHIKMLERELEESVSRLAAPEVLKKAMHYSLQAGGKRIRPLLVFATLKAFGED 65
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
+ A A+E++ T ++I DDLP +D+DDLRRGKP++HKVFGEA AILA AL +
Sbjct: 66 TKKGLQAAAAVEMIHTYSLIHDDLPSMDDDDLRRGKPTSHKVFGEANAILAGDALLTYSF 125
Query: 133 QHIAIIKAKNINSAV------------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
Q +A + ++ ++ V G+EG+ GQ DI E K++ L EL +IH HKT
Sbjct: 126 QLLAQMAPEDADAEVKLALINELARASGAEGMVGGQTADIEGEDKDLDLEELEYIHVHKT 185
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDM 239
GK + S+ +G ++ E ++ + F ++G+A+Q+ +DI+D+ G+ E+ K G D
Sbjct: 186 GKLLAFSVAAGALLSRAEESRLKSLNEFAHHLGLAFQIRDDILDLEGNEEVLGKPVGSDE 245
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQEL 270
+K+TYP ++ ++G+ K + I AK L
Sbjct: 246 TNNKSTYPSILTMEGANKALEHHIGMAKARL 276
>gi|19704662|ref|NP_604224.1| dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714968|gb|AAL95523.1| Dimethylallyltransferase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 297
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 153/271 (56%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + + M Y+ L GGKRL L + E++ + + + A A+E++ + ++
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNENINKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAI-----LACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA I L A + L+ +++ ++ +K I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSKQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G +G+ GQ++DI SE K++ L L +IH HKTGK I+ I II +
Sbjct: 142 ISKTSEYAGIDGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANLEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E + + G D+ KATYP ++G++ SKK
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ +AK+ + F + L L +FI
Sbjct: 262 LNNTVEKAKEIIKNKFGEEKGKVLISLADFI 292
>gi|423202732|ref|ZP_17189311.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
gi|404614928|gb|EKB11907.1| hypothetical protein HMPREF1167_02894 [Aeromonas veronii AER39]
Length = 296
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 161/292 (55%), Gaps = 20/292 (6%)
Query: 16 VNEYKALKAKQINEALD---EAVPLPHPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGG 71
++ + L ++I++ L E++P P L +AM Y L GGKR+ L A EM+G
Sbjct: 3 LDHFSRLHRQRIDDCLSAQLESLPAMAPR-LRDAMSYGLLLGGKRVRPFLVYAVGEMLGV 61
Query: 72 SQSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA 131
+ A A+E + +++ DDLP +DNDDLRRG+P+ HK F E TAILA AL LA
Sbjct: 62 KSELLDGPAAAVECIHAYSLLHDDLPAMDNDDLRRGQPTVHKAFDEGTAILAGDALQTLA 121
Query: 132 MQHIA------------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+A + + A G G+ GQ +D+ +EG++++L+EL +HRHK
Sbjct: 122 FSILADHPMPDALMANRVRMLSTLARASGYLGMCGGQALDLQAEGRQITLTELEQVHRHK 181
Query: 180 TGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IE ++ G + ++ + ++ + +G+A+Q+ +DI+D+ G + + + G
Sbjct: 182 TGALIECAVALGALCKADVDDATLAALQTYAAAIGLAFQVQDDILDITGDTATLGKPQGS 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ +K+TYP L+G++ +++ A+EL +A L P L+ ++I+
Sbjct: 242 DLALEKSTYPALLGLENARELARELHGKALTALQSL-PYNTDILEAFADYII 292
>gi|262371871|ref|ZP_06065150.1| geranyltranstransferase [Acinetobacter junii SH205]
gi|262311896|gb|EEY92981.1| geranyltranstransferase [Acinetobacter junii SH205]
Length = 303
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 149/257 (57%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P A +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SLPEPLKAAVHHAV---MLGGKRVRPALCYAAASLQANQNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI--------------AII 138
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + AI+
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEILGSRLFDDQAQGTDAAIV 147
Query: 139 KAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
+ A S + GQ++D+ +EGK V+ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVCGQVLDLQAEGKHVAQDELENIHRNKTGALIQAAIMMGAVTIYSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R FG+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+A+ L +A + L YF
Sbjct: 268 TYAQTLHDQAFEALEYF 284
>gi|422338359|ref|ZP_16419319.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
gi|355372275|gb|EHG19616.1| geranyltranstransferase [Fusobacterium nucleatum subsp. polymorphum
F0401]
Length = 297
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 153/271 (56%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + + M Y+ L GGKRL L A+ E++ + + + A A+E++ + ++
Sbjct: 22 ELQELSYPETIAKGMEYAVLNGGKRLRPFLLFATLELLNENINKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAI-----LACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA I L A + L+ +++ + + I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLEFLSFEQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G +G+ GQ++DI SE K++ L L +IH HKTGK I+ I II +
Sbjct: 142 ISKTSEYAGIKGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E+ + G D+ KATYP ++G++ SKK
Sbjct: 202 DKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ + +AK+ + F + L L +FI
Sbjct: 262 LNDTVEKAKEIIKNKFGEEKGKNLISLADFI 292
>gi|390577032|ref|ZP_10257072.1| polyprenyl synthetase [Burkholderia terrae BS001]
gi|389931010|gb|EIM93098.1| polyprenyl synthetase [Burkholderia terrae BS001]
Length = 297
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 157/284 (55%), Gaps = 23/284 (8%)
Query: 26 QINEALDEAVPL--PHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACA 82
++ AL++ +P PA LHEAMRY+ L GGKR+ LC A+ E+ G + + A
Sbjct: 13 RVEGALEQYLPADSTEPARLHEAMRYAVLGGGKRVRPLLCHAAGELTGAKAECLDAASAA 72
Query: 83 IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------- 132
+E++ +++ DD+PC+D+D+LRRGKP+ H + EATA+L AL A
Sbjct: 73 LEMIHVYSLVHDDMPCMDDDELRRGKPTVHVKYDEATALLVGDALQSQAFVALTSDVLAP 132
Query: 133 -QHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG 191
Q A++ + + A GS G+A GQ +D+ S G ++ +L +HR KTG + A++ G
Sbjct: 133 AQQAALV--RELALASGSIGMAGGQAIDLASVGHTLTRPQLETMHRLKTGALLRAAVRMG 190
Query: 192 VII-----GGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKAT 245
+ GG + + ++ + + VG+A+Q+ +DI+DV KT G+D K T
Sbjct: 191 ALTGQIENGGPDAKALQSLDAYSAAVGLAFQVVDDILDVTTDSATLGKTAGKDAKDGKPT 250
Query: 246 YPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
Y ++G+D S+ A +L ++A Q LA F RA L L + +V
Sbjct: 251 YVSIIGLDASRALAAQLRSDAHQALAPFG-ARAQRLAELADLVV 293
>gi|227890599|ref|ZP_04008404.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
gi|227867537|gb|EEJ74958.1| geranyltranstransferase [Lactobacillus salivarius ATCC 11741]
Length = 305
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLPCL 99
IL E+MRYS+ GGKR+ L + S +G S + +A ++ELL T ++I DDLP +
Sbjct: 41 ILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEM 100
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSE 150
DND+LRRGKP+NHK FG+A A+LA L + + +++ N + A G +
Sbjct: 101 DNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQ 160
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ +GQ DI E K+ +L EL +H KTG + + V+G I+ ++ ++E +R +G+
Sbjct: 161 GMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGE 220
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
G+A+Q+++D++DVIG + + + +D + +K TYP L+G+ G+K+ E++
Sbjct: 221 NFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL 274
>gi|392955274|ref|ZP_10320817.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
gi|391878746|gb|EIT87323.1| geranylgeranyl pyrophosphate synthase [Bacillus macauensis ZFHKF-1]
Length = 292
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 151/244 (61%), Gaps = 12/244 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P L E+M YSL GGKRL L +A E G + + ACA+E++ T ++I DDLPC
Sbjct: 28 PQSLQESMLYSLQAGGKRLRPILVLAVLEACGKPLEIGLEAACALEVVHTYSLIHDDLPC 87
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVG 148
+D+DD RRGKP+NHKVFGEATA+LA L ++ + IA + + A G
Sbjct: 88 MDDDDFRRGKPTNHKVFGEATAVLAGDGLLTVSFELIAASPHYTADQKVALLALLAKAAG 147
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
+EG+ GQ+ D+ SE ++++L+EL +H KTGK +EA++ G I+GG + E + ++ +
Sbjct: 148 AEGMVGGQMADMESEDQQLTLTELQRVHERKTGKLLEAAVSFGAILGGVSNEAFDHLQRY 207
Query: 209 GKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
++G+A+Q+ +DI+DV G + M ++ G D +K+TYPKL+ + G+K +A+AK
Sbjct: 208 SYHLGIAFQIQDDILDVQGDSQVMGKQVGSDEHNNKSTYPKLLTLQGAKDQLMGHLAQAK 267
Query: 268 QELA 271
L
Sbjct: 268 THLT 271
>gi|90961512|ref|YP_535428.1| geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|417810499|ref|ZP_12457178.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
gi|90820706|gb|ABD99345.1| Geranyltranstransferase [Lactobacillus salivarius UCC118]
gi|335349295|gb|EGM50795.1| geranyltranstransferase [Lactobacillus salivarius GJ-24]
Length = 297
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLPCL 99
IL E+MRYS+ GGKR+ L + S +G S + +A ++ELL T ++I DDLP +
Sbjct: 33 ILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEM 92
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSE 150
DND+LRRGKP+NHK FG+A A+LA L + + +++ N + A G +
Sbjct: 93 DNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQ 152
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ +GQ DI E K+ +L EL +H KTG + + V+G I+ ++ ++E +R +G+
Sbjct: 153 GMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGE 212
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
G+A+Q+++D++DVIG + + + +D + +K TYP L+G+ G+K+ E++
Sbjct: 213 NFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL 266
>gi|384176049|ref|YP_005557434.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595273|gb|AEP91460.1| geranyltranstransferase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 296
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 151/246 (61%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKKSMLYSLQAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSGEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + +++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F ++G+ +Q+ +DI+D+ GS E + ++ G D DK+TYP L+ ++G+K
Sbjct: 207 TLRAFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 IKEAKR 272
>gi|145630745|ref|ZP_01786523.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
gi|144983627|gb|EDJ91087.1| exodeoxyribonuclease VII small subunit [Haemophilus influenzae
R3021]
Length = 296
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 157/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A L EAM+Y+L GGKR+ L A+ +M+G + A AIE + ++I DDLP
Sbjct: 29 HNAPLLEAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALIQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +E+
Sbjct: 147 GAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P A L L FI++
Sbjct: 267 YQSALSELEKI-PFDTAALRALAEFIIT 293
>gi|445404323|ref|ZP_21430970.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
gi|444782485|gb|ELX06386.1| polyprenyl synthetase [Acinetobacter baumannii Naval-57]
Length = 303
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 151/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQNNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K I A S + GQ++D+ +E K++S EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 IYAKELHDQAFEALAHF 284
>gi|317056625|ref|YP_004105092.1| polyprenyl synthetase [Ruminococcus albus 7]
gi|315448894|gb|ADU22458.1| Polyprenyl synthetase [Ruminococcus albus 7]
Length = 297
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 144/250 (57%), Gaps = 17/250 (6%)
Query: 41 AILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAM-SMACAIELLVTMAVIQDDLPC 98
+++ EAM YSL GGKRL L + M GG M +AC++EL+ T ++I DDLPC
Sbjct: 32 SVVLEAMEYSLTAGGKRLRPILVLEFYRMCGGEDIDKMIKVACSVELIHTYSLIHDDLPC 91
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIKAKNINS 145
+DNDD RRGKPS HK F E A+LA AL+ LA + I A++ ++
Sbjct: 92 MDNDDFRRGKPSCHKAFSEDIALLAGDALNTLAFEVITDCAMEGTISAETAVMLVSVLSK 151
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
A+G++G+ GQ++D+ +E + + + LN + KTG IEA+ V GV++ G E I
Sbjct: 152 AIGTDGMIGGQVIDLETENEVIDIETLNRLQSCKTGALIEAACVMGVVL-SGKMEYIPAA 210
Query: 206 RNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
++ + +G A+Q+ +DI+DV G+ E+ + G D + K TY L+G+ S++ A +L
Sbjct: 211 ADYAQAMGRAFQIVDDILDVTGTFEELGKPIGSDSEQHKNTYVSLLGLQRSRQKAAQLTV 270
Query: 265 EAKQELAYFD 274
A L F+
Sbjct: 271 TALGALKNFE 280
>gi|260548951|ref|ZP_05823173.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260557259|ref|ZP_05829475.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|424054464|ref|ZP_17791988.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425741380|ref|ZP_18859528.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|260408119|gb|EEX01590.1| polyprenyl synthetase [Acinetobacter sp. RUH2624]
gi|260409365|gb|EEX02667.1| polyprenyl synthetase [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|407439213|gb|EKF45738.1| hypothetical protein W9I_02886 [Acinetobacter nosocomialis Ab22222]
gi|425492384|gb|EKU58643.1| polyprenyl synthetase [Acinetobacter baumannii WC-487]
gi|452952719|gb|EME58146.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii MSP4-16]
Length = 303
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 151/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K I A S + GQ++D+ +E K++S EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 VYAKELHDQAFEALAHF 284
>gi|254302823|ref|ZP_04970181.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323015|gb|EDK88265.1| dimethylallyltranstransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 297
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + + M Y+ L GGKRL L A+ E++ + + A A+E++ + ++
Sbjct: 22 ELQELSYPETIAKGMEYAILNGGKRLRPFLLFATLELLNQNIEKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAI-----LACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA I L A + L+ +++ + ++ I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYILSQKNLKFLSSEQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G G+ GQ++DI SE K++ L L +IH HKTGK I+ I II +
Sbjct: 142 ISKTSEYAGINGMIGGQMIDIESENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E+ + G D+ KATYP ++G++ SKK
Sbjct: 202 DKKEVLEEYANLIGLAFQVKDDILDVEGTFEELGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ + +AK+ + F + L L +FI
Sbjct: 262 LNDTVEKAKEIIKNNFGEEKGKILISLADFI 292
>gi|301300958|ref|ZP_07207123.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851425|gb|EFK79144.1| putative geranyltranstransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 277
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLPCL 99
IL E+MRYS+ GGKR+ L + S +G S + +A ++ELL T ++I DDLP +
Sbjct: 13 ILKESMRYSVDAGGKRIRPLLVLISAYSLGKKISKSDYQVAGSLELLHTYSLIHDDLPEM 72
Query: 100 DNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKN---------INSAVGSE 150
DND+LRRGKP+NHK FG+A A+LA L + + +++ N + A G +
Sbjct: 73 DNDELRRGKPTNHKKFGQAIAVLAGDGLLTTSFEWLSLTDIDNDKKIKLISQLALAAGPQ 132
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ +GQ DI E K+ +L EL +H KTG + + V+G I+ ++ ++E +R +G+
Sbjct: 133 GMVSGQTDDILGESKKYNLEELKHLHAGKTGALLRYACVAGGILSDASDNQLELLRKYGE 192
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELI 263
G+A+Q+++D++DVIG + + + +D + +K TYP L+G+ G+K+ E++
Sbjct: 193 NFGLAFQIYDDLLDVIGDAKSLGKNVHKDEIENKNTYPILLGVQGTKEALVEVL 246
>gi|420145078|ref|ZP_14652554.1| Farnesyl-diphosphate synthase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403313|gb|EJN56568.1| Farnesyl-diphosphate synthase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 289
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 20/266 (7%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS---QSVAMSMACAIELLVTMAVIQDDLPC 98
L AM YS + GGKR+ L +A + S QS + A AIEL+ T ++I DDLP
Sbjct: 29 LQAAMTYSVMAGGKRVRPLLLLAVVQTFQASLIPQS--LPAAAAIELIHTYSLIHDDLPA 86
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIK---------AKNINSAVGS 149
+DNDDLRRG+ +NHK FGEA AILA L LA Q ++ ++ + + G
Sbjct: 87 MDNDDLRRGQATNHKKFGEALAILAGDGLQPLAFQWLSDLRFTDAVKIKLIRELALGAGP 146
Query: 150 EGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFG 209
+ AGQ+ D+ E K +SL+EL +HR KTG ++AS++ G +I + + + +F
Sbjct: 147 LNMVAGQVADMQGEHKALSLTELKALHRRKTGALLKASLLMGAVISELDSKRTAALSDFA 206
Query: 210 KYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQ 268
++G+A+Q+ +DI+DV + E+ + +D +K TYP L+G+DG++ + A++
Sbjct: 207 DHLGLAFQIKDDILDVTSTAAELGKPVHQDQAANKNTYPSLLGLDGAQTALTTELTAARR 266
Query: 269 ELAYFDPTRAAP-LDHLVNFIVSFGN 293
L DP A+ + L F+ N
Sbjct: 267 AL---DPLVASTDISLLAAFLTELAN 289
>gi|337286891|ref|YP_004626364.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
gi|335359719|gb|AEH45400.1| Polyprenyl synthetase [Thermodesulfatator indicus DSM 15286]
Length = 300
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 109/272 (40%), Positives = 155/272 (56%), Gaps = 19/272 (6%)
Query: 19 YKALKAKQ--INEALDEAVPL--PHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQ 73
+ LK+KQ +N AL+ VP L EAM YSL GGKRL L +A E GG
Sbjct: 8 FDWLKSKQELVNRALEFYVPYLDGQARRLFEAMHYSLMSGGKRLRPILVMAGAEAAGGKP 67
Query: 74 SVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILA-----CQALH 128
+ ACAIE + T ++I DDLP +D+DDLRRGKP+ HK F EATAILA A
Sbjct: 68 EDVLPAACAIECIHTYSLIHDDLPAMDDDDLRRGKPTCHKAFDEATAILAGDGLLTHAFR 127
Query: 129 CLAMQHIA--------IIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
LA + +A + + + A G G+ AGQ+ D+ +EG+ V+ EL FIHRHKT
Sbjct: 128 LLAHEELADKFPQENLLEGIRLVAEAAGLYGMVAGQMADLLAEGRNVTAEELAFIHRHKT 187
Query: 181 GKFIEASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDM 239
I AS++ G + G ++E E + ++G +G A+Q+ +DI+D+ + K G D+
Sbjct: 188 AALIRASVLLGATLVGTGKKEKEALSSYGWNIGHAFQIIDDILDLTADEKTLGKPIGSDL 247
Query: 240 MRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
+ KATYP L G++ S+ A+ L+ EA +A
Sbjct: 248 KKKKATYPALFGLEASRAKARSLLEEALSSIA 279
>gi|422603975|ref|ZP_16675993.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
gi|330886861|gb|EGH20296.1| geranyltranstransferase [Pseudomonas syringae pv. mori str. 301020]
Length = 296
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 171/292 (58%), Gaps = 19/292 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A ++N AL++ P P + L+EAMRYS + GGKR+ L A+CE +GG
Sbjct: 2 IASYQAQSQTRVNAALEKLFQAPSPELNRLYEAMRYSVMNGGKRVRPLLAYAACEALGGV 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM 132
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEDANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 133 QHI---------AIIKAKNIN----SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHK 179
+ A + + +N +A + AGQ +D+ S G ++ + L ++HRHK
Sbjct: 122 TALLAPHLTSRDAETRLQMVNPLAAAAGPAGYGGAGQAIDLGSVGLKLDQAALEYMHRHK 181
Query: 180 TGKFIEASIVSGVIIGG-GNEEEIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGR 237
TG IEAS+ G + G ++ ++ ++ + + VG+A+Q+ +DI+DV + + ++ G
Sbjct: 182 TGALIEASVRLGALASGQADQPRLDALQIYARAVGLAFQVQDDILDVESDTATLGKRQGA 241
Query: 238 DMMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
D+ RDK TYP L+G++ +K++A EL +A L+ FD A PL L +IV
Sbjct: 242 DIARDKPTYPALLGLEAAKRYALELRDQALTALSTFDAA-AEPLRELARYIV 292
>gi|421524820|ref|ZP_15971441.1| polyprenyl synthetase [Pseudomonas putida LS46]
gi|402751283|gb|EJX11796.1| polyprenyl synthetase [Pseudomonas putida LS46]
Length = 295
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ AL+ P + L+ AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IGTYQASCQARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA- 131
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 132 -----------MQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ I + + + A G G+ GQ +D+ S G+++ L F+HRHKT
Sbjct: 122 SALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + E+ +++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G++ +K +A EL +A L F T A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLEAAKAYAIELRDQALAALQGFGET-AEPLRALARYIVERRN 295
>gi|94500549|ref|ZP_01307080.1| Polyprenyl synthetase [Bermanella marisrubri]
gi|94427339|gb|EAT12318.1| Polyprenyl synthetase [Bermanella marisrubri]
Length = 294
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 148/271 (54%), Gaps = 14/271 (5%)
Query: 32 DEAVPLPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMA 90
D +P L +AM YSL GGKR+ + A+ + G A A A+E++ +
Sbjct: 21 DYVLPNVDAQRLKDAMTYSLLNGGKRVRPLMVYATTRSLSGDLQAADQCALAVEMIHAYS 80
Query: 91 VIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIK 139
++ DDLP +D+D+LRRG+P+ H F EATAILA AL A Q + +
Sbjct: 81 LVHDDLPAMDDDELRRGQPTCHIAFDEATAILAGDALQTQAFQVLVQPIDGMAPQQQLRM 140
Query: 140 AKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ + A G G+A GQ +D+ + K+V + L +H HKTG IEAS+ G + +E
Sbjct: 141 VQTLAHASGLAGMAGGQSLDLEAVDKQVDIEYLQNMHLHKTGALIEASVKLGGLCANASE 200
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKH 258
+++ + + + +G+A+Q+ +DI+DVI K G D R+K TY L+G+DG+K+
Sbjct: 201 QQLSYLSVYAQAIGLAFQVQDDILDVISDTRTLGKPQGSDESRNKPTYVSLLGLDGAKRK 260
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
A++L +A+ L D +PL+ + +I+
Sbjct: 261 AQDLHQQARDALRKLDAD-TSPLEDIARYII 290
>gi|310829047|ref|YP_003961404.1| polyprenyl synthetase [Eubacterium limosum KIST612]
gi|308740781|gb|ADO38441.1| Polyprenyl synthetase [Eubacterium limosum KIST612]
Length = 297
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 141/250 (56%), Gaps = 15/250 (6%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P I+ AM+YSL GGKRL L +C +GG + +ACAIE++ T ++I DDLP
Sbjct: 30 PDIIVSAMKYSLFAGGKRLRPILMKETCRCLGGDSADVKPLACAIEMIHTYSLIHDDLPA 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQH----IAIIKAKNIN---------S 145
+DNDDLRRGKP+NHKV+GE AILA AL AM+ I + +K +
Sbjct: 90 MDNDDLRRGKPTNHKVYGENMAILAGDALLNYAMETAIAGIPVDPSKTFHYTRALSYLAH 149
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERM 205
+ G G+ GQ DI SE + ++ ++ +IH HKTG ++A+++ G + EE + +
Sbjct: 150 SSGVNGMIGGQTGDILSENEAINEEKMYYIHAHKTGALLKAAVLCGGFVAKVTGEERDAL 209
Query: 206 RNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKHAKELIA 264
+ + +G+A+Q+ +DI+DV G + K G D K+T+ L G+ S++ +EL
Sbjct: 210 ETYSEKIGLAFQIVDDILDVTGDEKTLGKPVGSDEKNHKSTFVSLYGMASSQEKIRELEN 269
Query: 265 EAKQELAYFD 274
A LA D
Sbjct: 270 GALDALATID 279
>gi|68250030|ref|YP_249142.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|145632792|ref|ZP_01788525.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145634984|ref|ZP_01790691.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
gi|68058229|gb|AAX88482.1| geranyltranstransferase [Haemophilus influenzae 86-028NP]
gi|144986448|gb|EDJ93014.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
3655]
gi|145267850|gb|EDK07847.1| 1-deoxy-D-xylulose-5-phosphate synthase [Haemophilus influenzae
PittAA]
Length = 296
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 157/268 (58%), Gaps = 19/268 (7%)
Query: 39 HPAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLP 97
H A+L EAM+Y+L GGKR+ L A+ +M+G + A AIE + ++I DDLP
Sbjct: 29 HNALLLEAMKYALLLGGKRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLP 88
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKAKNINS------------ 145
+D+D+LRRG P+ H F EATAILA AL A + + K NI++
Sbjct: 89 AMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE--ILTKTPNISAEQKLALIQILAQ 146
Query: 146 AVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIER 204
G +G+ GQ +D+ SE K++SLSEL IHR+KTG + A++ G I ++ +E+
Sbjct: 147 GAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALLIAALKLGFICSPHFTDKRLEQ 206
Query: 205 -MRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+ + + +G+A+Q+ +DI+D+ G S E+ ++ G D+ DK+TYPKL+G+ G+K+ A++L
Sbjct: 207 SLTQYAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDL 266
Query: 263 IAEAKQELAYFDPTRAAPLDHLVNFIVS 290
A EL P L L F+++
Sbjct: 267 YQSALSELEKI-PFDTTALRALAEFVIT 293
>gi|389709465|ref|ZP_10186841.1| geranyltranstransferase [Acinetobacter sp. HA]
gi|388610158|gb|EIM39289.1| geranyltranstransferase [Acinetobacter sp. HA]
Length = 302
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 161/291 (55%), Gaps = 28/291 (9%)
Query: 15 QVNEYKALKAKQINEALDEAVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQS 74
Q + AL A I E L AV H A++ GGKR+ LC A+ + +
Sbjct: 20 QQDLLTALDAFAITEPLKSAV---HHAVM--------LGGKRVRPALCYATAALKPNQNT 68
Query: 75 VAMSMACA-IELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQ 133
A+ A IE + ++ DDLPC+DND LRRG+P+ H FGE TA+LA L +A +
Sbjct: 69 AAVRRAAVAIEFIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFE 128
Query: 134 HI-------------AIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ AI+ + A S + GQ++D+ SEGK + L IHR+KT
Sbjct: 129 ILGSRLFDQGPAVEPAIVLKQMQILATASSKMVNGQVLDLQSEGKRIDQEALETIHRNKT 188
Query: 181 GKFIEASI-VSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRD 238
G I A+I ++ V I G + I ++R FG+ +G+A+Q+ +DI+D+I E+ KT G+D
Sbjct: 189 GALISAAIMMAAVTIFEGTDLAIPKLREFGQAIGLAFQVQDDILDIISDTEVLGKTAGKD 248
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIV 289
+K+TYP L+G++ +K++AK+L +A LA+F+ ++A L + F++
Sbjct: 249 EQVEKSTYPALMGLEQAKQYAKQLHDQALNALAHFE-SQAEELTQITQFLL 298
>gi|169794893|ref|YP_001712686.1| geranyltranstransferase [Acinetobacter baumannii AYE]
gi|213157703|ref|YP_002320501.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|215482441|ref|YP_002324625.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|301347512|ref|ZP_07228253.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB056]
gi|301512686|ref|ZP_07237923.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB058]
gi|301597254|ref|ZP_07242262.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB059]
gi|332855972|ref|ZP_08436103.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332870742|ref|ZP_08439424.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|417555685|ref|ZP_12206754.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|417560169|ref|ZP_12211048.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|421198439|ref|ZP_15655604.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|421455317|ref|ZP_15904661.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|421620071|ref|ZP_16061013.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|421634937|ref|ZP_16075542.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|421642165|ref|ZP_16082691.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|421647240|ref|ZP_16087659.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|421650160|ref|ZP_16090540.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|421658083|ref|ZP_16098328.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|421673934|ref|ZP_16113870.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|421692226|ref|ZP_16131878.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|421699881|ref|ZP_16139402.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|421794768|ref|ZP_16230860.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|421799478|ref|ZP_16235470.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|421804600|ref|ZP_16240507.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|424058821|ref|ZP_17796314.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|425750513|ref|ZP_18868479.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|445448908|ref|ZP_21444054.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|445456889|ref|ZP_21446148.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
gi|445488898|ref|ZP_21458441.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|169147820|emb|CAM85683.1| geranyltranstransferase (farnesyldiphosphate synthase) (FPP
synthase) [Acinetobacter baumannii AYE]
gi|193078216|gb|ABO13173.2| geranyltranstransferase [Acinetobacter baumannii ATCC 17978]
gi|213056863|gb|ACJ41765.1| polyprenyl synthetase [Acinetobacter baumannii AB0057]
gi|213985840|gb|ACJ56139.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter baumannii AB307-0294]
gi|332727208|gb|EGJ58659.1| polyprenyl synthetase [Acinetobacter baumannii 6013150]
gi|332732037|gb|EGJ63312.1| polyprenyl synthetase [Acinetobacter baumannii 6013113]
gi|395522751|gb|EJG10840.1| polyprenyl synthetase [Acinetobacter baumannii OIFC137]
gi|395565335|gb|EJG26982.1| polyprenyl synthetase [Acinetobacter baumannii OIFC109]
gi|400211555|gb|EJO42517.1| polyprenyl synthetase [Acinetobacter baumannii IS-123]
gi|400392102|gb|EJP59149.1| polyprenyl synthetase [Acinetobacter baumannii Naval-81]
gi|404560118|gb|EKA65363.1| polyprenyl synthetase [Acinetobacter baumannii IS-116]
gi|404571156|gb|EKA76220.1| polyprenyl synthetase [Acinetobacter baumannii IS-58]
gi|404664759|gb|EKB32736.1| hypothetical protein W9K_03113 [Acinetobacter baumannii Ab33333]
gi|408511199|gb|EKK12849.1| polyprenyl synthetase [Acinetobacter baumannii OIFC0162]
gi|408513717|gb|EKK15331.1| polyprenyl synthetase [Acinetobacter baumannii IS-235]
gi|408516676|gb|EKK18247.1| polyprenyl synthetase [Acinetobacter baumannii IS-251]
gi|408701307|gb|EKL46741.1| polyprenyl synthetase [Acinetobacter baumannii OIFC074]
gi|408703203|gb|EKL48605.1| polyprenyl synthetase [Acinetobacter baumannii Naval-13]
gi|408711194|gb|EKL56405.1| polyprenyl synthetase [Acinetobacter baumannii Naval-83]
gi|410385277|gb|EKP37770.1| polyprenyl synthetase [Acinetobacter baumannii OIFC065]
gi|410403124|gb|EKP55225.1| polyprenyl synthetase [Acinetobacter baumannii Naval-21]
gi|410409716|gb|EKP61641.1| polyprenyl synthetase [Acinetobacter baumannii Canada BC1]
gi|410411050|gb|EKP62932.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-694]
gi|425486634|gb|EKU53000.1| polyprenyl synthetase [Acinetobacter baumannii WC-348]
gi|444757365|gb|ELW81890.1| polyprenyl synthetase [Acinetobacter baumannii WC-A-92]
gi|444766892|gb|ELW91146.1| polyprenyl synthetase [Acinetobacter baumannii AA-014]
gi|444777393|gb|ELX01423.1| polyprenyl synthetase [Acinetobacter baumannii OIFC047]
Length = 303
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 151/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K I A S + GQ++D+ +E K++S EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 IYAKELHDQAFEALAHF 284
>gi|299768927|ref|YP_003730953.1| geranyltranstransferase [Acinetobacter oleivorans DR1]
gi|298699015|gb|ADI89580.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter oleivorans DR1]
Length = 303
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 151/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQPNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K I A + + GQ++D+ +E K+++ EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQIQILATATSKMVCGQVLDLQAEAKQIAQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQTIGLAFQVLDDILDITSSTEALGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LAYF
Sbjct: 268 IYAKELHDQAFEALAYF 284
>gi|296333415|ref|ZP_06875868.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675079|ref|YP_003866751.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149613|gb|EFG90509.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413323|gb|ADM38442.1| geranyltranstransferase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 296
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 151/246 (61%), Gaps = 14/246 (5%)
Query: 37 LPHPAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDD 95
L P L ++M YSL GGKRL + +A G S+ + + CA+E++ T ++I DD
Sbjct: 27 LDMPDSLKKSMLYSLEAGGKRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDD 86
Query: 96 LPCLDNDDLRRGKPSNHKVFGEATAILACQALHC----LAMQHI-----AIIKAKNIN-- 144
LPC+D+DDLRRGKP+NHKVFGEATA+LA L L H+ A + + +N
Sbjct: 87 LPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKRLRLVNEL 146
Query: 145 -SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIE 203
SA G+EG+ GQ+ D+ +E ++V+L EL IH KT K + +++G I+ EE+IE
Sbjct: 147 ISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLSFCVIAGAILADAPEEDIE 206
Query: 204 RMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKHAKEL 262
+R F ++G+ +Q+ +DI+D+ GS E + ++ G D +K+TYP L+ ++G+K
Sbjct: 207 TLRTFSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNEKSTYPSLLSLEGAKHKLDVH 266
Query: 263 IAEAKQ 268
I EAK+
Sbjct: 267 IKEAKR 272
>gi|403674867|ref|ZP_10937091.1| Geranyltranstransferase(Farnesyl-diphosphate synthase)
[Acinetobacter sp. NCTC 10304]
Length = 303
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 151/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P + +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKSAVHHAV---MLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDAQGQGTDAAIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K I A S + GQ++D+ +E K++S EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFSG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R +G+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+AKEL +A + LA+F
Sbjct: 268 IYAKELHDQAFEALAHF 284
>gi|406037339|ref|ZP_11044703.1| geranyltranstransferase [Acinetobacter parvus DSM 16617 = CIP
108168]
Length = 303
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 150/257 (58%), Gaps = 20/257 (7%)
Query: 34 AVPLPHPAILHEAMRYSLPGGKRLMSTLCIASCEMIGGSQ-SVAMSMACAIELLVTMAVI 92
++P P A +H A+ + GGKR+ LC A+ + + A A A+EL+ ++
Sbjct: 31 SIPEPLKAAVHHAV---MLGGKRVRPALCYAAASLQPNPYFAAARRAAVAVELIHCYSLA 87
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI-------------AIIK 139
DDLPC+DND LRRG+P+ H FGE TA+LA L +A + + A I
Sbjct: 88 HDDLPCMDNDLLRRGQPTCHVAFGENTALLAGDILQSMAFEILGSRLFDEQGQGTDATIV 147
Query: 140 AKNIN-SAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSG-VIIGGG 197
K + A S + GQ++D+ +EGK+V +EL IHR+KTG I+A+I+ G V I G
Sbjct: 148 LKQMQILATASSKMVCGQVLDLQAEGKQVDQAELENIHRNKTGALIQAAIMMGAVTIFAG 207
Query: 198 NEEEIERMRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSK 256
++ I ++R FG+ +G+A+Q+ +DI+D+ S E KT G+D K+TYP L+G++ ++
Sbjct: 208 TDQAIPKLRQFGQSIGLAFQVQDDILDITASTETLGKTAGKDEQVQKSTYPALMGLEKAQ 267
Query: 257 KHAKELIAEAKQELAYF 273
+A+ L +A + L YF
Sbjct: 268 AYAQTLHDQAFEALGYF 284
>gi|290968311|ref|ZP_06559853.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
gi|290781670|gb|EFD94256.1| geranyltranstransferase [Megasphaera genomosp. type_1 str. 28L]
Length = 295
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 145/258 (56%), Gaps = 15/258 (5%)
Query: 19 YKALKAKQINEALDEAVPLPHPAI--LHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSV 75
Y A K I L + +P+ PA L++AM YSL GGKR+ L +A+ E +G SV
Sbjct: 7 YLAAKKTVIEARLQQLLPVTEPAFAPLYKAMNYSLLAGGKRIRPILFLAALEALGKESSV 66
Query: 76 AMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHI 135
M +ACA+E + + ++I DDLP +DNDDLRRGKP+NH+VFGE AILA L A + +
Sbjct: 67 YMDVACALECVHSYSLIHDDLPAMDNDDLRRGKPTNHRVFGEGMAILAGDGLLTFAFELL 126
Query: 136 A---IIKAKNINS-------AVGSEGIAAGQIMDINSEGK-EVSLSELNFIHRHKTGKFI 184
A + A+ I + A G G+ GQ D+ SEG ++ L +HR KTG
Sbjct: 127 ARQRVADAEKIGACIRVLAHAAGPAGMVGGQAYDLLSEGHGDIGTEGLKLMHRGKTGVIF 186
Query: 185 EASIVSGVIIGGGNEEEIERMRNFGKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDK 243
EA + I+ + ++ + + +G+ +Q+ +DI+D G+ E+ + G D+ +K
Sbjct: 187 EAVMSMAGILAAAPAAVRQVLQAYAEQLGLTFQITDDILDACGTEAELGKPVGSDVKNNK 246
Query: 244 ATYPKLVGIDGSKKHAKE 261
ATY L +D +K+ A+E
Sbjct: 247 ATYVTLFSLDKAKQLAQE 264
>gi|410657101|ref|YP_006909472.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|410660137|ref|YP_006912508.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
gi|409019456|gb|AFV01487.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. DCA]
gi|409022493|gb|AFV04523.1| Octaprenyl-diphosphate synthase / Dimethylallyltransferase /
Geranyltranstransferase (farnesyldiphosphate synthase) /
Geranylgeranyl pyrophosphate synthetase [Dehalobacter
sp. CF]
Length = 288
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 158/264 (59%), Gaps = 13/264 (4%)
Query: 42 ILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLD 100
IL +M YSL GGKR+ L +A E++GG +S A AIEL+ T ++I DDLP +D
Sbjct: 26 ILGRSMNYSLVGGGKRIRPVLALACAELVGGRPEELVSEAAAIELIHTYSLIHDDLPAMD 85
Query: 101 NDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIAIIKA----------KNINSAVGSE 150
+DD RRGK SNHKVFGEA AILA AL LA + +A A + A G +
Sbjct: 86 DDDYRRGKLSNHKVFGEAGAILAGDALLTLAFELLAGPSAIEAQKKLRVIRETAQAAGWQ 145
Query: 151 GIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNFGK 210
G+ GQ +D + +L+++ +H KTG ++AS G I+GGG+E EIE + ++
Sbjct: 146 GMVGGQSLDTLGNLENSTLADIEQVHHLKTGALLKASARLGAILGGGSEPEIEILTSYAL 205
Query: 211 YVGMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQE 269
Y+G+A+Q+ +DI+DV+G S + + G+D K TYP L+G++G+++ ++ I AK+
Sbjct: 206 YLGLAFQIKDDILDVVGESAVIGKSAGKDQKSGKPTYPSLLGLEGAREQLEKTIFLAKES 265
Query: 270 LAYFDPTRAAPLDHLVNFIVSFGN 293
L+ F P +AA L L ++ N
Sbjct: 266 LSCFGP-KAAFLLSLADYTAERTN 288
>gi|148545812|ref|YP_001265914.1| polyprenyl synthetase [Pseudomonas putida F1]
gi|148509870|gb|ABQ76730.1| farnesyl-diphosphate synthase [Pseudomonas putida F1]
Length = 295
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ AL+ P + L+ AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IGTYQASCQARVDAALEPLFIAPSKELQRLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA- 131
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 132 -----------MQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ I + + + A G G+ GQ +D+ S G+++ L F+HRHKT
Sbjct: 122 SALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + E+ +++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G++ +K +A EL +A L F T A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLEAAKVYAIELRDQALAALQGFGET-AEPLRALARYIVERRN 295
>gi|397698475|ref|YP_006536358.1| polyprenyl synthetase [Pseudomonas putida DOT-T1E]
gi|397335205|gb|AFO51564.1| polyprenyl synthetase [Pseudomonas putida DOT-T1E]
Length = 295
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 165/295 (55%), Gaps = 18/295 (6%)
Query: 16 VNEYKALKAKQINEALDEAVPLPHPAI--LHEAMRYS-LPGGKRLMSTLCIASCEMIGGS 72
+ Y+A +++ AL+ P + L+ AMRYS + GGKR+ L A+CE +G
Sbjct: 2 IGTYQASCQARVDAALEPLFIAPSKELERLYAAMRYSVMNGGKRVRPLLAYAACEALGAP 61
Query: 73 QSVAMSMACAIELLVTMAVIQDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLA- 131
A ACA+EL+ +++ DDLP +D+DDLRRG+P+ HK F EA AILA L LA
Sbjct: 62 AEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAF 121
Query: 132 -----------MQHIAIIKAKNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKT 180
+ I + + + A G G+ GQ +D+ S G+++ L F+HRHKT
Sbjct: 122 SALLDPCLSPQIDSIRLAMVQVLAKAAGPAGMVGGQAIDLGSVGQKLDQQALEFMHRHKT 181
Query: 181 GKFIEASIVSGVIIGGGNEE-EIERMRNFGKYVGMAYQLWNDIVDVIG-SPEMREKTGRD 238
G IEAS+ G + E+ +++ ++ + + +G+A+Q+ +DI+DV + + ++ G D
Sbjct: 182 GALIEASVRLGALASARAEQAQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGAD 241
Query: 239 MMRDKATYPKLVGIDGSKKHAKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
+ RDK TYP L+G++ +K +A EL +A L F T A PL L +IV N
Sbjct: 242 IARDKPTYPALLGLEAAKVYAIELRDQALAALQGFGET-AEPLRALARYIVERRN 295
>gi|15672839|ref|NP_267013.1| farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|385830396|ref|YP_005868209.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
gi|418038343|ref|ZP_12676675.1| (2E,6E)-farnesyl diphosphate synthase [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|12723785|gb|AAK04955.1|AE006320_4 farnesyl diphosphate synthase [Lactococcus lactis subsp. lactis
Il1403]
gi|326406404|gb|ADZ63475.1| dimethylallyltransferase/geranyltranstransferase [Lactococcus
lactis subsp. lactis CV56]
gi|354693354|gb|EHE93123.1| (2E,6E)-farnesyl diphosphate synthase [Lactococcus lactis subsp.
cremoris CNCM I-1631]
Length = 285
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 144/244 (59%), Gaps = 12/244 (4%)
Query: 40 PAILHEAMRYSL-PGGKRLMSTLCIASCEMIGGSQSVA-MSMACAIELLVTMAVIQDDLP 97
P L E+ +YSL GGKR+ L + E S A +A A+E++ T ++I DDLP
Sbjct: 22 PTGLAESAKYSLLAGGKRIRPLLFLNLLEAFDLELSKAHYHVAAALEMIHTGSLIHDDLP 81
Query: 98 CLDNDDLRRGKPSNHKVFGEATAILACQALHCLAM---------QHIAIIKAKNINSAVG 148
+DNDD RRG+ +NHK F EATAILA L I + + + A G
Sbjct: 82 AMDNDDYRRGQLTNHKKFDEATAILAGDTLFFDPFFILSTADLSAEIIVALTRELAFASG 141
Query: 149 SEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEEEIERMRNF 208
S G+ AGQI+D+ EGKE++L+E+ IHR KTG+ + V+ I+ + +E+E++R
Sbjct: 142 SYGMVAGQILDMAGEGKELTLAEIEQIHRLKTGRLLTFPFVAAGIVAQKSTDEVEKLRQV 201
Query: 209 GKYVGMAYQLWNDIVDVIGS-PEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAK 267
G+ +G+A+Q+ +DI+DV + E+ + G+D++ +K+TY +G++G+KK ++E K
Sbjct: 202 GQILGLAFQIRDDILDVTATFAELGKTPGKDILEEKSTYVAHLGLEGAKKSLTGNLSEVK 261
Query: 268 QELA 271
+ L
Sbjct: 262 KLLT 265
>gi|423137069|ref|ZP_17124712.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371961136|gb|EHO78779.1| hypothetical protein HMPREF9942_00850 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 297
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 152/271 (56%), Gaps = 15/271 (5%)
Query: 33 EAVPLPHPAILHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAV 91
E L +P + + M Y+ L GGKRL L + E++ + + A A+E++ + ++
Sbjct: 22 ELKELSYPETIAKGMEYAILNGGKRLRPFLLFVTLELLNEDINKGVKSAIALEMIHSYSL 81
Query: 92 IQDDLPCLDNDDLRRGKPSNHKVFGEATAI-----LACQALHCLAMQHIAIIKAKNINSA 146
+ DDLP LDNDD RRGK + HKVFGEA I L A + L+ +++ ++ ++ I +
Sbjct: 82 VHDDLPALDNDDYRRGKLTTHKVFGEAEGILIGDSLLTYAFYVLSQKNLELLSSEQIVNI 141
Query: 147 V-------GSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE 199
+ G G+ GQ++DI SE K++ L L +IH HKTGK I+ I II +
Sbjct: 142 ISKTSEYSGINGMIGGQMIDIQSENKKIDLETLKYIHSHKTGKLIKLPIEIACIIANVEK 201
Query: 200 EEIERMRNFGKYVGMAYQLWNDIVDVIGSPE-MREKTGRDMMRDKATYPKLVGIDGSKKH 258
++ E + + +G+A+Q+ +DI+DV G+ E + + G D+ KATYP ++G++ SKK
Sbjct: 202 DKREVLEEYADLIGLAFQVKDDILDVEGTFEDLGKPVGSDVDLHKATYPSILGMEESKKI 261
Query: 259 AKELIAEAKQELA-YFDPTRAAPLDHLVNFI 288
+ + +AKQ + F + L L +FI
Sbjct: 262 LNDTVEKAKQIIKDKFGDEKGKILISLADFI 292
>gi|77361281|ref|YP_340856.1| geranyltranstransferase [Pseudoalteromonas haloplanktis TAC125]
gi|76876192|emb|CAI87414.1| geranyltranstransferase (farnesyldiphosphate synthase or FPP
synthase) [Pseudoalteromonas haloplanktis TAC125]
Length = 295
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 150/258 (58%), Gaps = 15/258 (5%)
Query: 46 AMRYSL-PGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDNDDL 104
A YSL GGKRL L A+ +M+G + +A AIE + + +++ DDLP +D+D+L
Sbjct: 35 ATHYSLMNGGKRLRPFLVYATGKMLGADKQDLDVLAAAIECIHSYSLVHDDLPAMDDDEL 94
Query: 105 RRGKPSNHKVFGEATAILACQALHCLAMQHIA-----------IIKAKNINSAVGSEGIA 153
RRG+P+ H V+GEA AILA AL LA + IA + + A G +G+
Sbjct: 95 RRGRPTCHIVYGEAHAILAGDALQALAFELIAKHNFNCSAQAQVKMIAELAHASGLQGMV 154
Query: 154 AGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGG-NEEEIERMRNFGKYV 212
AGQ +DI + K ++++EL IH+ KTG I +I G + ++ +E + FG +
Sbjct: 155 AGQGLDIAATDKVITVAELERIHKLKTGALISCAITLGALCSNNVSQNTLENLATFGYAI 214
Query: 213 GMAYQLWNDIVDVIG-SPEMREKTGRDMMRDKATYPKLVGIDGSKKHAKELIAEAKQELA 271
G+A+Q+ +DI+DV G + + + G D+ +KATYP L+G+ G+K+ A+ LI +A LA
Sbjct: 215 GLAFQVHDDILDVEGDTVTLGKPQGSDIAANKATYPALLGMLGAKEKAQNLIQQAHAALA 274
Query: 272 YFDPTRAAPLDHLVNFIV 289
D +A L L N+++
Sbjct: 275 NIDADTSA-LASLANYLI 291
>gi|113461047|ref|YP_719114.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
gi|112823090|gb|ABI25179.1| farnesyl-diphosphate synthase [Haemophilus somnus 129PT]
Length = 296
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 156/267 (58%), Gaps = 19/267 (7%)
Query: 40 PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPC 98
P+ L EAM+Y L GGKR+ L A+ +M+G + A AIE + ++I DDLP
Sbjct: 30 PSPLAEAMKYGLLLGGKRIRPFLVYATGKMLGANLIQLDYAAAAIEAIHAYSLIHDDLPA 89
Query: 99 LDNDDLRRGKPSNHKVFGEATAILACQALHCLAM------------QHIAIIKAKNINSA 146
+DND LRRG P+ H F ATAILA AL A Q +A++ + + +A
Sbjct: 90 MDNDSLRRGHPTCHIAFDHATAILAGDALQPFAFELLTQTPDLSAEQKLALV--QTLANA 147
Query: 147 VGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGG--GNEEEIER 204
G +G+ GQ +D+ SE ++++LS L IHR+KTG + A++ G I N + E+
Sbjct: 148 SGVKGMCLGQSLDLISENQQINLSALEKIHRNKTGALLSAAVKMGFICSPHFANIKLEEQ 207
Query: 205 MRNFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELI 263
+ ++ VG+A+Q+ +DI+D+ G + KT G D++ DK+TYPKL+G+DG+K+ A+EL
Sbjct: 208 LMHYSSAVGLAFQVQDDILDIEGESIVIGKTAGSDLLADKSTYPKLIGLDGAKQKARELY 267
Query: 264 AEAKQELAYFDPTRAAPLDHLVNFIVS 290
+A QEL P + L L F+V+
Sbjct: 268 HQALQELDAL-PFDTSALHALAEFVVN 293
>gi|407692512|ref|YP_006817301.1| geranyltranstransferase [Actinobacillus suis H91-0380]
gi|407388569|gb|AFU19062.1| geranyltranstransferase [Actinobacillus suis H91-0380]
Length = 297
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 151/264 (57%), Gaps = 21/264 (7%)
Query: 43 LHEAMRYS-LPGGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVIQDDLPCLDN 101
L +AM Y+ L GGKR+ L A+ M+G S A A+E + +++ DDLP +D+
Sbjct: 34 LVDAMSYAVLLGGKRVRPFLIYATGRMLGVSLEQLDHSAAAMEAIHAYSLVHDDLPAMDD 93
Query: 102 DDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA----------IIKAKNINSAVGSEG 151
D LRRGKP+ H F EATAILA AL A + IA + + + + A G+ G
Sbjct: 94 DKLRRGKPTCHIAFDEATAILAGDALQSFAFELIAQDESLTDSQKVWQIQALAQAAGARG 153
Query: 152 IAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNE-----EEIERMR 206
+ GQ +D+ +E K V+L+EL IHR+KTG I AS++ G + ++ + +ER
Sbjct: 154 MCLGQSLDLLAEDKAVNLAELELIHRNKTGALIVASVLMGFNLSAHSQNLAVKQPLER-- 211
Query: 207 NFGKYVGMAYQLWNDIVDVIGSPEMREKT-GRDMMRDKATYPKLVGIDGSKKHAKELIAE 265
+ + +G+A+Q+ +DI+DVIG + KT G D K+TYPKL+G++G++K A++L
Sbjct: 212 -YAQAIGLAFQVQDDILDVIGETDKIGKTVGSDENLHKSTYPKLLGLEGAQKKAQDLYQT 270
Query: 266 AKQELAYFDPTRAAPLDHLVNFIV 289
A L P + L L +FIV
Sbjct: 271 ALNALEEL-PFDTSALKELAHFIV 293
>gi|260776529|ref|ZP_05885424.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607752|gb|EEX34017.1| octaprenyl-diphosphate
synthase/dimethylallyltransferase/geranyltranstransferas
e/geranylgeranyl pyrophosphate synthetase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 294
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 149/275 (54%), Gaps = 21/275 (7%)
Query: 37 LPH---PAILHEAMRYSLP-GGKRLMSTLCIASCEMIGGSQSVAMSMACAIELLVTMAVI 92
LPH P I EAMRY L GGKR L + +M+G + A AIE + ++I
Sbjct: 23 LPHQEQPLI--EAMRYGLLLGGKRARPFLVYITGQMLGCKLEELDTPASAIECIHAYSLI 80
Query: 93 QDDLPCLDNDDLRRGKPSNHKVFGEATAILACQALHCLAMQHIA------------IIKA 140
DDLP +D+D+LRRG+P+ H F EATAIL AL LA +A I
Sbjct: 81 HDDLPAMDDDELRRGQPTCHIKFDEATAILTGDALQTLAFTILADGELSPEAETYRIKMV 140
Query: 141 KNINSAVGSEGIAAGQIMDINSEGKEVSLSELNFIHRHKTGKFIEASIVSGVIIGGGNEE 200
K + A G+ G+ GQ +D+++EG++VSL+EL IHR+KTG ++ +I G + G
Sbjct: 141 KALAEASGANGMCLGQALDLSAEGQKVSLAELENIHRNKTGALMKCAIRLGALAAGQKGS 200
Query: 201 EI-ERMRNFGKYVGMAYQLWNDIVDVIGSPEMREK-TGRDMMRDKATYPKLVGIDGSKKH 258
EI ++ F +G+A+Q+ +DI+D+I E K G D DK+TYP L+G++G+
Sbjct: 201 EILPQLDQFADAIGLAFQVQDDILDIISDTETLGKPQGSDQDLDKSTYPALLGLEGAINK 260
Query: 259 AKELIAEAKQELAYFDPTRAAPLDHLVNFIVSFGN 293
A L+ EA Q L P L+ +++ N
Sbjct: 261 AHTLLTEALQALEAI-PYNTELLEEFARYVIERKN 294
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,509,120,727
Number of Sequences: 23463169
Number of extensions: 182729147
Number of successful extensions: 433594
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5998
Number of HSP's successfully gapped in prelim test: 3251
Number of HSP's that attempted gapping in prelim test: 411443
Number of HSP's gapped (non-prelim): 9655
length of query: 295
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 154
effective length of database: 9,050,888,538
effective search space: 1393836834852
effective search space used: 1393836834852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)