BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037601
MQGGLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEIVFAELLIP
CRHFVDETSIIRSVKDIFMVTKERIFKFLQTTVAWLSNPSYIRSWLDLLSQTPRVAPFIS
KNDPFIMALKKGLDDLISLFRRPPSRKVETA

High Scoring Gene Products

Symbol, full name Information P value
AT3G44330 protein from Arabidopsis thaliana 2.3e-26

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037601
        (151 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100192 - symbol:AT3G44330 species:3702 "Arabi...   177  2.3e-26   2


>TAIR|locus:2100192 [details] [associations]
            symbol:AT3G44330 species:3702 "Arabidopsis thaliana"
            [GO:0009966 "regulation of signal transduction" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016485 "protein processing"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005773
            "vacuole" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
            evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0006499 "N-terminal protein myristoylation"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            InterPro:IPR008710 InterPro:IPR016574 Pfam:PF05450
            PIRSF:PIRSF011018 Prosite:PS00018 GO:GO:0005783 GO:GO:0016021
            GO:GO:0005739 GO:GO:0005886 GO:GO:0009506 GO:GO:0005794
            GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009966
            InterPro:IPR018247 EMBL:AL138641 GO:GO:0016485 HOGENOM:HOG000006315
            OMA:YVAVQHF EMBL:AK226270 IPI:IPI00533424 PIR:T47423
            RefSeq:NP_190019.1 UniGene:At.23557 ProteinModelPortal:Q9M292
            PRIDE:Q9M292 EnsemblPlants:AT3G44330.1 GeneID:823558
            KEGG:ath:AT3G44330 TAIR:At3g44330 InParanoid:Q9M292
            PhylomeDB:Q9M292 ProtClustDB:CLSN2684473 Genevestigator:Q9M292
            Uniprot:Q9M292
        Length = 565

 Score = 177 (67.4 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
 Identities = 40/81 (49%), Positives = 51/81 (62%)

Query:    62 RHFVDETSIIRSVKDIFMVTKERIF-------KFLQTTVAWLSNPSYIRSWLDLLSQTPR 114
             R  V+E +II+ VK +     + I+       K      +   NP Y+RSWLDLLSQTPR
Sbjct:   405 RQLVNEDAIIKGVKLVAESLAKHIYGHQGKDIKIFADDSSLAVNPFYVRSWLDLLSQTPR 464

Query:   115 VAPFISKNDPFIMALKKGLDD 135
             VAPF+SKN+P IMALKK L+D
Sbjct:   465 VAPFLSKNEPLIMALKKELED 485

 Score = 154 (59.3 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
 Identities = 31/52 (59%), Positives = 38/52 (73%)

Query:     1 MQGGLQGLKADGDANQLPTIAIVASYDTFGAAPALXXXXXXXXXXXXALLEI 52
             +QG L GL+A+GD++QLPTIA+VASYDTFGAAPAL            ALLE+
Sbjct:   207 IQGWLPGLRAEGDSSQLPTIAVVASYDTFGAAPALSVGSDSNGSGVVALLEV 258

 Score = 95 (38.5 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
 Identities = 18/25 (72%), Positives = 22/25 (88%)

Query:   125 FIMALKKGLDDLISLFRRPPSRKVE 149
             F++   +GLDDLISLFRRPPSRKV+
Sbjct:   539 FLVITTRGLDDLISLFRRPPSRKVK 563


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      151       139   0.00091  102 3  11 22  0.38    31
                                                     30  0.46    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  125 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.91u 0.11s 12.02t   Elapsed:  00:00:00
  Total cpu time:  11.91u 0.11s 12.02t   Elapsed:  00:00:00
  Start:  Tue May 21 03:00:46 2013   End:  Tue May 21 03:00:46 2013

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