Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>037606
MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV
VVGFCNIKLLPMLAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFGGAAFMALNAS
LFWLICLMLADNARDDYFDEEDQNHKCEYGQVFTTDYDAKGQGDV

High Scoring Gene Products

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037606
        (165 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2126281 - symbol:AT4G31130 "AT4G31130" species...   251  1.4e-29   2


>TAIR|locus:2126281 [details] [associations]
            symbol:AT4G31130 "AT4G31130" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161578 InterPro:IPR009606 Pfam:PF06749 EMBL:BT004774
            IPI:IPI00536038 PIR:T10667 RefSeq:NP_194842.1 UniGene:At.43091
            IntAct:Q9M089 PRIDE:Q9M089 EnsemblPlants:AT4G31130.1 GeneID:829241
            KEGG:ath:AT4G31130 TAIR:At4g31130 eggNOG:NOG293957
            HOGENOM:HOG000241486 InParanoid:Q9M089 OMA:DNAREDY PhylomeDB:Q9M089
            ProtClustDB:CLSN2685835 ArrayExpress:Q9M089 Genevestigator:Q9M089
            Uniprot:Q9M089
        Length = 195

 Score = 251 (93.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 50/90 (55%), Positives = 66/90 (73%)

Query:    52 SIVALTASVVVGFCNIKLLPM-LAVGMLFWPTIAELIHRTRHVHHNMSTIRPTAKTGLFG 110
             S++  + S  V F NI L+   LA+ +L WPTI E +H TR+VH N+ T  PTAKTGL G
Sbjct:    86 SVLFKSTSFSV-FFNIALITSGLALSLLLWPTITEQLHLTRNVHRNLETSCPTAKTGLLG 144

Query:   111 GAAFMALNASLFWLICLMLADNARDDYFDE 140
             G AF++L++ LFWL+ LMLADNAR+D+FDE
Sbjct:   145 GGAFVSLDSCLFWLVALMLADNAREDHFDE 174

 Score = 92 (37.4 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
 Identities = 24/64 (37%), Positives = 33/64 (51%)

Query:     1 MVLTGGVLGVKSSILGIAAENRKVHPEFHRLQQELSLGTYSSDSTIILGFLSIVALTASV 60
             M L    LGV S +LG+ AEN+K         + + +  Y SD T+ LG+LS   L A  
Sbjct:     8 MSLVVSALGVLSFVLGVIAENKKPASGTPISGKGVVICKYPSDPTVALGYLSAAFLLACT 67

Query:    61 VVGF 64
             V G+
Sbjct:    68 VAGY 71


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      165       165   0.00093  107 3  11 22  0.46    31
                                                     30  0.45    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  148 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.30u 0.14s 15.44t   Elapsed:  00:00:01
  Total cpu time:  15.30u 0.14s 15.44t   Elapsed:  00:00:01
  Start:  Tue May 21 03:24:14 2013   End:  Tue May 21 03:24:15 2013

Back to top