Query 037606
Match_columns 165
No_of_seqs 58 out of 60
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 03:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037606.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037606hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eysh2 f.23.10.1 (H:7-43) Pho 20.5 61 0.0044 18.5 3.6 17 121-137 12-33 (37)
2 d1v7pb_ d.169.1.1 (B:) Snake c 17.0 19 0.0014 23.1 0.8 9 37-45 119-127 (127)
3 d1ntxa_ g.7.1.1 (A:) alpha-Tox 14.8 23 0.0017 22.3 0.8 9 100-108 40-48 (60)
4 d1d0gr1 g.24.1.1 (R:21-61) Dea 13.0 31 0.0023 19.9 0.9 19 25-43 9-29 (41)
5 d3ebxa_ g.7.1.1 (A:) Erabutoxi 10.2 39 0.0029 21.2 0.8 8 101-108 43-50 (62)
6 d2i5nm1 f.26.1.1 (M:1-323) M ( 9.1 68 0.005 25.9 2.0 48 112-159 267-315 (323)
7 d1v6pa_ g.7.1.1 (A:) Cobrotoxi 8.7 49 0.0035 20.8 0.8 8 101-108 43-50 (62)
8 d1drsa_ g.7.1.2 (A:) Dendroasp 8.6 51 0.0037 20.5 0.8 9 100-108 38-46 (59)
9 d1eysl_ f.26.1.1 (L:) L (light 8.4 69 0.005 25.4 1.7 46 5-50 31-85 (280)
10 d1fasa_ g.7.1.1 (A:) Fasciculi 7.6 56 0.0041 20.4 0.7 9 100-108 40-48 (61)
No 1
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=20.55 E-value=61 Score=18.46 Aligned_cols=17 Identities=35% Similarity=0.915 Sum_probs=12.5
Q ss_pred HHHH-----HHHHHhhcCCCCc
Q 037606 121 LFWL-----ICLMLADNARDDY 137 (165)
Q Consensus 121 lfwl-----i~lmL~~nar~d~ 137 (165)
+||+ +.+.-+.|.||.|
T Consensus 12 ~Fw~FFagLi~YL~rE~~REGy 33 (37)
T d1eysh2 12 AFWLFFFGLIIYLRREDKREGY 33 (37)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSC
T ss_pred HHHHHHHHHHHHHHhcccccCC
Confidence 5665 4566688999987
No 2
>d1v7pb_ d.169.1.1 (B:) Snake coagglutinin beta chain {Snake (Echis multisquamatus), Ems16 [TaxId: 93050]}
Probab=16.99 E-value=19 Score=23.06 Aligned_cols=9 Identities=11% Similarity=0.375 Sum_probs=8.2
Q ss_pred eEeeCCCch
Q 037606 37 LGTYSSDST 45 (165)
Q Consensus 37 ~C~YP~~Pa 45 (165)
+|+||.|||
T Consensus 119 iCe~~~~Pa 127 (127)
T d1v7pb_ 119 VCKFLTDPA 127 (127)
T ss_dssp EEEEECCCC
T ss_pred EEEEcCCCC
Confidence 899999996
No 3
>d1ntxa_ g.7.1.1 (A:) alpha-Toxin {Black mamba (Dendroaspis polylepis polylepis) [TaxId: 8620]}
Probab=14.77 E-value=23 Score=22.25 Aligned_cols=9 Identities=33% Similarity=0.475 Sum_probs=7.7
Q ss_pred CCcccCCcc
Q 037606 100 IRPTAKTGL 108 (165)
Q Consensus 100 ~C~t~K~Gv 108 (165)
-||.+|+|+
T Consensus 40 gCP~vkpgi 48 (60)
T d1ntxa_ 40 GCPKVKPGV 48 (60)
T ss_dssp SCCCCCTTS
T ss_pred CCCCCCCCc
Confidence 399999987
No 4
>d1d0gr1 g.24.1.1 (R:21-61) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.01 E-value=31 Score=19.86 Aligned_cols=19 Identities=21% Similarity=0.284 Sum_probs=13.5
Q ss_pred CCCceee--cCceeeEeeCCC
Q 037606 25 HPEFHRL--QQELSLGTYSSD 43 (165)
Q Consensus 25 ~~g~~i~--g~~v~~C~YP~~ 43 (165)
++|-+|. +++-..|+|-+|
T Consensus 9 ppghhised~r~cisckygqd 29 (41)
T d1d0gr1 9 PPGHHISEDGRDCISCKYGQD 29 (41)
T ss_dssp CTTEEECSSSSCEEECCTTTE
T ss_pred CCCcccccccceeeEeccCCc
Confidence 3566675 666678999876
No 5
>d3ebxa_ g.7.1.1 (A:) Erabutoxin B (also neurotoxin B) {Sea snake (Laticauda semifasciata) [TaxId: 8631]}
Probab=10.24 E-value=39 Score=21.24 Aligned_cols=8 Identities=50% Similarity=0.862 Sum_probs=7.2
Q ss_pred CcccCCcc
Q 037606 101 RPTAKTGL 108 (165)
Q Consensus 101 C~t~K~Gv 108 (165)
||.+|+|+
T Consensus 43 CP~vkpgi 50 (62)
T d3ebxa_ 43 CPTVKPGI 50 (62)
T ss_dssp CCCCCTTC
T ss_pred CCCCCCCc
Confidence 99999986
No 6
>d2i5nm1 f.26.1.1 (M:1-323) M (medium) subunit {Rhodopseudomonas viridis [TaxId: 1079]}
Probab=9.11 E-value=68 Score=25.94 Aligned_cols=48 Identities=13% Similarity=0.168 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccch-hccccccccCcccccccCc
Q 037606 112 AAFMALNASLFWLICLMLADNARDDYFDE-EDQNHKCEYGQVFTTDYDA 159 (165)
Q Consensus 112 aAvLsL~a~lfwli~lmL~~nar~d~~~~-~~~~~~~~~~~~~~~~~~~ 159 (165)
|=++++.+.+..-+|..++..--+++++= .+-..--+|.+++.+-.|+
T Consensus 267 ~~~~Av~~~~tsaigIllsGt~vdnW~~W~~~hg~~p~~p~~~~~~~~p 315 (323)
T d2i5nm1 267 GWFFSLMVMVSASVGILLTGTFVDNWYLWCVKHGAAPDYPAYLPATPDP 315 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHBTTTBSCHHHHHHHTTCCCCCCCSSCCBCCG
T ss_pred HHHHHHHHHHHhheeEEEeCCcccCHHHHHHHhCcCCCCCcccCCCCCc
Confidence 34555555555556666666665555554 3322233455544444333
No 7
>d1v6pa_ g.7.1.1 (A:) Cobrotoxin II (ct2) {Taiwan cobra (Naja naja atra) [TaxId: 8656]}
Probab=8.72 E-value=49 Score=20.75 Aligned_cols=8 Identities=38% Similarity=0.837 Sum_probs=7.2
Q ss_pred CcccCCcc
Q 037606 101 RPTAKTGL 108 (165)
Q Consensus 101 C~t~K~Gv 108 (165)
||.+|+|+
T Consensus 43 CP~vkpgi 50 (62)
T d1v6pa_ 43 CPSVKNGI 50 (62)
T ss_dssp CCCCCTTC
T ss_pred CCCCCCCC
Confidence 99999986
No 8
>d1drsa_ g.7.1.2 (A:) Dendroaspin {Dendroaspis jamesoni kaimosae [TaxId: 8619]}
Probab=8.57 E-value=51 Score=20.54 Aligned_cols=9 Identities=11% Similarity=-0.116 Sum_probs=7.7
Q ss_pred CCcccCCcc
Q 037606 100 IRPTAKTGL 108 (165)
Q Consensus 100 ~C~t~K~Gv 108 (165)
-||.+|+|+
T Consensus 38 GCP~vkp~i 46 (59)
T d1drsa_ 38 GCFTPRGDM 46 (59)
T ss_dssp CCCSCCSSC
T ss_pred CCCCCCCCC
Confidence 499999986
No 9
>d1eysl_ f.26.1.1 (L:) L (light) subunit {Thermochromatium tepidum [TaxId: 1050]}
Probab=8.39 E-value=69 Score=25.39 Aligned_cols=46 Identities=13% Similarity=-0.002 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHHhhc-------CCCCC-CceeecCcee-eEeeCCCchhhhHH
Q 037606 5 GGVLGVKSSILGIAAEN-------RKVHP-EFHRLQQELS-LGTYSSDSTIILGF 50 (165)
Q Consensus 5 V~~LGvlS~ilGf~AE~-------kK~~~-g~~i~g~~v~-~C~YP~~Pa~~LG~ 50 (165)
+|.+||+|+++|+.|=. -.|.- ...+..++.- .=..|.+|..+|++
T Consensus 31 lG~~Gv~sl~~~~la~~~i~~~~~~~~~~~~~~~~~~nl~~lal~PP~~~yGL~~ 85 (280)
T d1eysl_ 31 VGFFGVVGFCFTLLGVLLIVWGATIGPTGPTSDLQTYNLWRISIAPPDLSYGLRM 85 (280)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHCSSCTTSTTCCCCTTTCCBCCCCGGGTTSC
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHhCccCChhHhhhhhhheeeecCCChHhhccc
Confidence 68889999887765421 11111 1111122221 45679999998874
No 10
>d1fasa_ g.7.1.1 (A:) Fasciculin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Probab=7.61 E-value=56 Score=20.42 Aligned_cols=9 Identities=22% Similarity=0.076 Sum_probs=7.6
Q ss_pred CCcccCCcc
Q 037606 100 IRPTAKTGL 108 (165)
Q Consensus 100 ~C~t~K~Gv 108 (165)
-||.+|+|+
T Consensus 40 GCP~vkp~i 48 (61)
T d1fasa_ 40 GCPPGDDYL 48 (61)
T ss_dssp SCCCCCSSE
T ss_pred CCCCCCCCc
Confidence 489999986
Done!