Query 037610
Match_columns 405
No_of_seqs 209 out of 1591
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 03:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037610.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037610hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 7odc_A Protein (ornithine deca 100.0 6.1E-69 2.1E-73 540.0 39.9 369 24-402 10-416 (424)
2 2oo0_A ODC, ornithine decarbox 100.0 1.9E-64 6.4E-69 513.3 41.7 360 24-393 20-417 (471)
3 3btn_A Antizyme inhibitor 1; T 100.0 5.2E-64 1.8E-68 507.8 38.9 363 24-396 11-408 (448)
4 1f3t_A ODC, ornithine decarbox 100.0 5.1E-63 1.8E-67 497.9 38.9 356 25-391 13-405 (425)
5 3vab_A Diaminopimelate decarbo 100.0 5.3E-63 1.8E-67 499.3 36.5 365 6-394 17-416 (443)
6 3n2b_A Diaminopimelate decarbo 100.0 1.2E-61 4.3E-66 489.0 37.0 343 30-394 39-415 (441)
7 2nva_A Arginine decarboxylase, 100.0 3.9E-60 1.3E-64 469.4 39.1 347 35-392 2-370 (372)
8 2plj_A Lysine/ornithine decarb 100.0 3.9E-58 1.3E-62 461.3 35.3 352 22-392 27-405 (419)
9 3mt1_A Putative carboxynorsper 100.0 2.3E-59 7.8E-64 462.2 22.7 317 48-392 2-341 (365)
10 1knw_A Diaminopimelate decarbo 100.0 5.2E-57 1.8E-61 454.2 38.4 333 48-394 24-397 (425)
11 3n29_A Carboxynorspermidine de 100.0 7.1E-59 2.4E-63 465.1 23.6 323 46-393 40-396 (418)
12 2j66_A BTRK, decarboxylase; bu 100.0 2E-57 6.9E-62 458.0 34.1 335 47-392 14-393 (428)
13 2o0t_A Diaminopimelate decarbo 100.0 1.5E-57 5E-62 463.3 32.1 346 30-393 29-425 (467)
14 2qgh_A Diaminopimelate decarbo 100.0 1.9E-56 6.4E-61 450.4 39.8 348 27-394 17-397 (425)
15 2yxx_A Diaminopimelate decarbo 100.0 2.6E-56 9E-61 444.1 33.6 330 47-394 10-362 (386)
16 1twi_A Diaminopimelate decarbo 100.0 8.5E-56 2.9E-60 446.9 34.2 348 30-399 17-410 (434)
17 2p3e_A Diaminopimelate decarbo 100.0 1.1E-53 3.8E-58 429.7 37.7 343 30-393 21-395 (420)
18 3nzp_A Arginine decarboxylase; 100.0 3E-43 1E-47 364.3 36.0 352 32-396 29-540 (619)
19 3nzq_A ADC, biosynthetic argin 100.0 3.1E-43 1.1E-47 366.0 34.2 352 32-396 70-589 (666)
20 3n2o_A ADC, biosynthetic argin 100.0 1.3E-42 4.3E-47 360.5 33.0 253 32-290 48-365 (648)
21 2dy3_A Alanine racemase; alpha 100.0 2E-37 6.7E-42 305.4 20.3 297 52-375 4-332 (361)
22 1xfc_A Alanine racemase; alpha 100.0 3.9E-37 1.3E-41 305.7 21.8 304 47-375 8-347 (384)
23 2vd8_A Alanine racemase; pyrid 100.0 4.4E-37 1.5E-41 305.9 18.6 304 48-378 9-348 (391)
24 1vfs_A Alanine racemase; TIM-b 100.0 2.2E-36 7.6E-41 300.4 19.5 302 48-375 5-344 (386)
25 1bd0_A Alanine racemase; isome 100.0 6.6E-36 2.3E-40 297.0 18.5 296 52-378 8-341 (388)
26 3co8_A Alanine racemase; prote 100.0 1.1E-34 3.8E-39 287.5 17.9 302 48-379 7-344 (380)
27 4ecl_A Serine racemase, vantg; 100.0 1.5E-32 5.1E-37 270.9 20.7 295 53-372 8-338 (374)
28 2rjg_A Alanine racemase; alpha 100.0 1.9E-32 6.5E-37 271.3 20.4 295 49-373 22-348 (379)
29 1rcq_A Catabolic alanine racem 100.0 5.2E-32 1.8E-36 266.3 22.1 292 52-373 4-326 (357)
30 3kw3_A Alanine racemase; niaid 100.0 1.9E-32 6.6E-37 269.7 16.2 296 49-372 19-345 (376)
31 3e5p_A Alanine racemase; ALR, 100.0 3.8E-32 1.3E-36 267.5 15.7 294 52-372 9-336 (371)
32 3mub_A Alanine racemase; alpha 100.0 1E-30 3.6E-35 256.8 18.7 293 52-372 9-332 (367)
33 4a3q_A Alanine racemase 1; iso 100.0 8.5E-31 2.9E-35 258.5 17.7 291 52-372 9-334 (382)
34 3hur_A Alanine racemase; struc 100.0 6.3E-30 2.2E-34 252.8 15.2 293 52-372 10-340 (395)
35 3anu_A D-serine dehydratase; P 99.9 1.1E-26 3.8E-31 229.8 20.4 236 47-302 9-284 (376)
36 3llx_A Predicted amino acid al 99.9 1.7E-23 5.8E-28 206.9 20.6 222 47-289 11-269 (376)
37 3gwq_A D-serine deaminase; str 99.9 3.3E-22 1.1E-26 200.4 25.6 181 47-242 43-238 (426)
38 3cpg_A Uncharacterized protein 99.8 1.3E-18 4.4E-23 165.1 18.1 173 55-240 26-230 (282)
39 3sy1_A UPF0001 protein YGGS; e 99.5 3.3E-13 1.1E-17 124.9 17.7 156 74-242 29-195 (245)
40 1ct5_A Protein (yeast hypothet 99.5 5.5E-13 1.9E-17 124.3 16.4 169 57-240 17-210 (256)
41 3r79_A Uncharacterized protein 99.4 1.3E-11 4.5E-16 113.8 18.0 164 59-238 11-188 (244)
42 1vhc_A Putative KHG/KDPG aldol 81.8 14 0.00047 32.7 11.2 102 33-146 30-136 (224)
43 3f4w_A Putative hexulose 6 pho 81.4 23 0.00078 30.4 12.5 96 63-161 42-159 (211)
44 1ydn_A Hydroxymethylglutaryl-C 81.2 12 0.00039 34.6 11.0 28 189-217 182-211 (295)
45 1nvm_A HOA, 4-hydroxy-2-oxoval 80.3 17 0.00058 34.3 12.0 29 189-217 176-206 (345)
46 2ftp_A Hydroxymethylglutaryl-C 80.0 15 0.0005 34.1 11.2 21 129-149 85-106 (302)
47 1zcc_A Glycerophosphodiester p 74.5 34 0.0011 30.4 11.7 101 48-157 126-233 (248)
48 3l12_A Putative glycerophospho 69.0 71 0.0024 29.3 13.5 103 48-157 179-306 (313)
49 3kts_A Glycerol uptake operon 68.5 13 0.00046 32.1 7.1 72 53-148 108-180 (192)
50 3ks6_A Glycerophosphoryl diest 67.6 66 0.0023 28.5 13.1 101 48-157 131-242 (250)
51 2ztj_A Homocitrate synthase; ( 67.1 70 0.0024 30.5 12.8 28 189-217 171-201 (382)
52 2cw6_A Hydroxymethylglutaryl-C 67.0 65 0.0022 29.5 12.2 16 102-117 80-95 (298)
53 4fo4_A Inosine 5'-monophosphat 66.2 68 0.0023 30.5 12.3 92 52-148 122-241 (366)
54 3usb_A Inosine-5'-monophosphat 66.0 75 0.0026 31.6 13.2 92 52-148 270-389 (511)
55 3qvq_A Phosphodiesterase OLEI0 65.7 72 0.0025 28.2 12.8 97 52-157 145-248 (252)
56 1yxy_A Putative N-acetylmannos 63.5 35 0.0012 29.8 9.3 78 87-168 39-140 (234)
57 2yci_X 5-methyltetrahydrofolat 63.4 28 0.00097 31.7 8.7 84 33-124 65-169 (271)
58 2pz0_A Glycerophosphoryl diest 63.2 80 0.0027 27.9 13.5 98 49-156 144-248 (252)
59 3no3_A Glycerophosphodiester p 61.9 73 0.0025 28.0 11.1 94 52-157 132-234 (238)
60 3lab_A Putative KDPG (2-keto-3 60.5 23 0.00078 31.2 7.2 39 32-75 25-65 (217)
61 3ewb_X 2-isopropylmalate synth 59.7 78 0.0027 29.0 11.1 28 189-216 177-208 (293)
62 3ivs_A Homocitrate synthase, m 59.3 1.3E+02 0.0045 29.1 14.2 28 189-217 207-235 (423)
63 3igs_A N-acetylmannosamine-6-p 59.2 24 0.00082 31.3 7.3 58 87-148 39-109 (232)
64 3eye_A PTS system N-acetylgala 58.5 74 0.0025 26.7 9.7 85 86-172 48-153 (168)
65 3m1r_A Formimidoylglutamase; s 58.3 47 0.0016 30.9 9.5 103 108-213 172-289 (322)
66 1tx2_A DHPS, dihydropteroate s 58.2 90 0.0031 28.7 11.2 69 49-124 115-204 (297)
67 3tsm_A IGPS, indole-3-glycerol 58.2 1.1E+02 0.0037 27.8 12.4 81 87-169 82-177 (272)
68 3q58_A N-acetylmannosamine-6-p 57.6 23 0.00078 31.4 6.8 59 87-148 39-109 (229)
69 1ydo_A HMG-COA lyase; TIM-barr 56.7 1.2E+02 0.0042 27.9 12.6 18 86-103 30-48 (307)
70 2c6q_A GMP reductase 2; TIM ba 56.5 73 0.0025 30.0 10.6 84 60-148 147-253 (351)
71 4avf_A Inosine-5'-monophosphat 56.0 1.5E+02 0.0051 29.2 13.2 106 33-148 229-362 (490)
72 3ble_A Citramalate synthase fr 55.9 27 0.00093 32.8 7.4 28 189-217 196-225 (337)
73 3eeg_A 2-isopropylmalate synth 54.3 85 0.0029 29.2 10.5 29 189-217 178-210 (325)
74 1wa3_A 2-keto-3-deoxy-6-phosph 54.0 1E+02 0.0034 26.1 15.6 20 129-148 113-132 (205)
75 1wv2_A Thiazole moeity, thiazo 53.5 1.1E+02 0.0037 27.7 10.5 118 24-148 73-217 (265)
76 2pgw_A Muconate cycloisomerase 53.1 87 0.003 29.7 10.7 104 57-164 173-293 (384)
77 2q5c_A NTRC family transcripti 52.9 21 0.00073 30.7 5.7 30 87-116 132-161 (196)
78 4e5t_A Mandelate racemase / mu 52.8 32 0.0011 33.2 7.6 100 58-161 191-308 (404)
79 3rcy_A Mandelate racemase/muco 52.8 53 0.0018 32.0 9.2 104 57-164 185-306 (433)
80 3tn4_A Phosphotriesterase; lac 52.6 66 0.0023 30.5 9.6 61 87-148 196-264 (360)
81 3lab_A Putative KDPG (2-keto-3 52.6 52 0.0018 28.9 8.1 54 102-159 72-132 (217)
82 3r2g_A Inosine 5'-monophosphat 52.6 1E+02 0.0034 29.3 10.8 28 120-147 201-228 (361)
83 4e38_A Keto-hydroxyglutarate-a 52.2 28 0.00096 31.0 6.4 107 56-171 43-156 (232)
84 1vd6_A Glycerophosphoryl diest 52.1 65 0.0022 27.9 8.9 95 49-154 122-221 (224)
85 1f6y_A 5-methyltetrahydrofolat 51.8 1E+02 0.0035 27.7 10.4 140 48-213 68-231 (262)
86 3eez_A Putative mandelate race 51.7 61 0.0021 30.8 9.3 108 57-168 171-293 (378)
87 3tdn_A FLR symmetric alpha-bet 51.6 43 0.0015 29.6 7.7 71 86-158 37-124 (247)
88 2otd_A Glycerophosphodiester p 51.2 85 0.0029 27.6 9.7 22 129-150 217-238 (247)
89 3paj_A Nicotinate-nucleotide p 50.4 1.2E+02 0.004 28.3 10.6 36 99-138 235-270 (320)
90 1aj0_A DHPS, dihydropteroate s 49.8 72 0.0025 29.1 9.0 81 34-124 78-185 (282)
91 3gr7_A NADPH dehydrogenase; fl 49.5 1.4E+02 0.0046 27.9 11.2 92 61-157 197-322 (340)
92 2vp8_A Dihydropteroate synthas 49.4 90 0.0031 29.1 9.7 28 75-102 138-165 (318)
93 1jcn_A Inosine monophosphate d 48.8 2.1E+02 0.0071 28.2 14.1 106 33-148 255-388 (514)
94 1ypf_A GMP reductase; GUAC, pu 47.5 1.1E+02 0.0037 28.5 10.2 22 121-142 213-234 (336)
95 1gq6_A Proclavaminate amidino 47.4 23 0.0008 32.8 5.4 102 108-213 164-278 (313)
96 2ef5_A Arginase; TTHA1496, str 47.0 96 0.0033 28.2 9.5 94 116-213 157-261 (290)
97 1eye_A DHPS 1, dihydropteroate 46.9 1.2E+02 0.004 27.7 9.9 56 87-145 70-129 (280)
98 2htm_A Thiazole biosynthesis p 46.7 1.7E+02 0.0057 26.5 11.0 88 55-148 107-208 (268)
99 3rr1_A GALD, putative D-galact 46.6 63 0.0021 31.1 8.5 103 58-164 161-281 (405)
100 3jr2_A Hexulose-6-phosphate sy 45.7 1.4E+02 0.0049 25.5 11.6 93 63-158 48-162 (218)
101 4e4u_A Mandalate racemase/muco 44.4 86 0.0029 30.2 9.1 100 58-161 184-301 (412)
102 1nvm_A HOA, 4-hydroxy-2-oxoval 44.2 2E+02 0.0069 26.7 12.2 134 87-234 33-190 (345)
103 4fxs_A Inosine-5'-monophosphat 43.7 1.8E+02 0.0061 28.7 11.5 106 34-149 232-365 (496)
104 2pju_A Propionate catabolism o 43.4 51 0.0017 29.0 6.7 48 99-153 134-185 (225)
105 3niq_A 3-guanidinopropionase; 43.3 23 0.00078 33.2 4.6 102 108-213 169-283 (326)
106 3i4k_A Muconate lactonizing en 43.1 1.4E+02 0.0047 28.3 10.3 104 57-164 176-297 (383)
107 1y0e_A Putative N-acetylmannos 42.4 1.2E+02 0.0041 25.9 9.1 79 86-166 25-124 (223)
108 2p10_A MLL9387 protein; putati 42.4 1.1E+02 0.0038 27.9 8.8 123 86-226 110-245 (286)
109 3ozy_A Putative mandelate race 42.3 1E+02 0.0035 29.3 9.3 101 57-161 177-296 (389)
110 3qja_A IGPS, indole-3-glycerol 41.4 2E+02 0.0068 25.9 12.8 70 87-158 75-157 (272)
111 3go2_A Putative L-alanine-DL-g 41.3 1.2E+02 0.0039 29.2 9.5 99 60-162 198-311 (409)
112 3nio_A Guanidinobutyrase; PA14 41.3 51 0.0018 30.6 6.7 102 108-213 172-286 (319)
113 2qgy_A Enolase from the enviro 41.0 1.2E+02 0.0042 28.7 9.6 100 58-161 177-294 (391)
114 1eep_A Inosine 5'-monophosphat 40.7 1.2E+02 0.0043 28.8 9.6 85 59-147 179-285 (404)
115 2og9_A Mandelate racemase/muco 40.3 1.1E+02 0.0039 29.0 9.3 100 57-160 189-306 (393)
116 1eye_A DHPS 1, dihydropteroate 39.7 1.8E+02 0.0062 26.4 10.0 69 49-124 80-177 (280)
117 1vrd_A Inosine-5'-monophosphat 39.5 2.8E+02 0.0096 27.1 12.4 83 61-147 265-369 (494)
118 1ep3_A Dihydroorotate dehydrog 39.1 2.2E+02 0.0074 25.6 12.9 27 121-147 244-270 (311)
119 1nrz_A PTS system, sorbose-spe 38.6 62 0.0021 27.0 6.1 81 89-171 46-147 (164)
120 1o1z_A GDPD, glycerophosphodie 38.5 1.6E+02 0.0054 25.6 9.3 96 49-155 126-233 (234)
121 2ovl_A Putative racemase; stru 38.4 1E+02 0.0034 29.1 8.4 99 57-160 173-290 (371)
122 2p8b_A Mandelate racemase/muco 38.2 1.5E+02 0.005 27.8 9.6 106 57-166 167-291 (369)
123 3ddm_A Putative mandelate race 38.2 80 0.0027 30.2 7.8 122 32-162 157-301 (392)
124 2yci_X 5-methyltetrahydrofolat 38.1 1.6E+02 0.0055 26.5 9.4 59 86-147 66-132 (271)
125 2o56_A Putative mandelate race 37.9 96 0.0033 29.6 8.3 102 59-164 199-318 (407)
126 1yx1_A Hypothetical protein PA 37.8 1E+02 0.0034 27.1 8.0 17 87-103 26-43 (264)
127 2wm8_A MDP-1, magnesium-depend 37.5 1.3E+02 0.0046 24.5 8.4 16 87-102 74-89 (187)
128 2ztj_A Homocitrate synthase; ( 37.1 1.5E+02 0.0051 28.2 9.5 131 86-233 27-184 (382)
129 3sbf_A Mandelate racemase / mu 37.1 1.8E+02 0.0061 27.7 10.1 98 58-159 184-299 (401)
130 3hgj_A Chromate reductase; TIM 36.9 1.9E+02 0.0064 27.0 10.0 84 61-148 205-319 (349)
131 1qap_A Quinolinic acid phospho 36.6 1.7E+02 0.0059 26.8 9.4 46 100-147 234-280 (296)
132 3lhl_A Putative agmatinase; pr 36.2 1.9E+02 0.0066 26.2 9.7 95 116-213 148-247 (287)
133 1zfj_A Inosine monophosphate d 36.2 3.1E+02 0.011 26.6 12.4 83 61-148 261-366 (491)
134 1olt_A Oxygen-independent copr 36.2 53 0.0018 32.1 6.2 88 49-138 113-227 (457)
135 1nu5_A Chloromuconate cycloiso 36.0 1.5E+02 0.0051 27.8 9.3 107 57-166 170-293 (370)
136 1f76_A Dihydroorotate dehydrog 35.9 93 0.0032 28.8 7.7 88 58-148 187-319 (336)
137 3v3w_A Starvation sensing prot 35.7 68 0.0023 31.1 6.8 107 58-168 209-333 (424)
138 1ydn_A Hydroxymethylglutaryl-C 35.2 2.3E+02 0.0079 25.5 10.2 42 189-232 153-194 (295)
139 3dxi_A Putative aldolase; TIM 34.9 1.6E+02 0.0056 27.2 9.1 32 184-217 166-198 (320)
140 3t6c_A RSPA, putative MAND fam 34.9 79 0.0027 30.8 7.2 100 58-162 223-341 (440)
141 2pp0_A L-talarate/galactarate 34.8 1.5E+02 0.0053 28.1 9.2 100 57-160 202-319 (398)
142 3qja_A IGPS, indole-3-glycerol 34.7 1.3E+02 0.0046 27.1 8.3 72 86-159 151-235 (272)
143 3dip_A Enolase; structural gen 34.6 1.5E+02 0.0052 28.4 9.1 100 58-162 196-315 (410)
144 3gnn_A Nicotinate-nucleotide p 34.3 1.4E+02 0.0047 27.5 8.2 37 98-138 212-248 (298)
145 3i6e_A Muconate cycloisomerase 33.9 2.8E+02 0.0094 26.2 10.8 106 57-166 175-297 (385)
146 3ve9_A Orotidine-5'-phosphate 33.9 47 0.0016 29.0 4.8 58 87-147 118-180 (215)
147 3ch0_A Glycerophosphodiester p 33.8 32 0.0011 30.9 3.9 47 113-159 209-257 (272)
148 2qde_A Mandelate racemase/muco 33.7 2.4E+02 0.0081 26.7 10.3 18 191-208 278-295 (397)
149 3khj_A Inosine-5-monophosphate 33.7 3E+02 0.01 25.8 11.8 17 101-117 152-168 (361)
150 3tr9_A Dihydropteroate synthas 33.5 1.5E+02 0.0052 27.4 8.5 89 56-147 46-155 (314)
151 2vef_A Dihydropteroate synthas 33.4 2.3E+02 0.0077 26.2 9.7 59 35-103 74-135 (314)
152 3mz2_A Glycerophosphoryl diest 33.2 2.2E+02 0.0074 25.8 9.5 100 48-157 156-276 (292)
153 1fob_A Beta-1,4-galactanase; B 33.2 2.9E+02 0.01 25.4 11.9 78 99-215 6-83 (334)
154 3r2g_A Inosine 5'-monophosphat 33.0 3.2E+02 0.011 25.8 12.3 109 84-217 53-175 (361)
155 3toy_A Mandelate racemase/muco 33.0 1.8E+02 0.0062 27.5 9.3 39 58-98 196-241 (383)
156 4dxk_A Mandelate racemase / mu 33.0 70 0.0024 30.7 6.4 100 59-162 194-311 (400)
157 2dqw_A Dihydropteroate synthas 32.9 1.3E+02 0.0044 27.6 7.8 56 86-145 92-151 (294)
158 3r4e_A Mandelate racemase/muco 32.8 53 0.0018 31.8 5.5 105 58-166 203-325 (418)
159 3ro6_B Putative chloromuconate 32.1 62 0.0021 30.4 5.8 103 57-164 166-288 (356)
160 3dgb_A Muconate cycloisomerase 31.9 2.1E+02 0.0071 27.0 9.6 104 58-165 177-298 (382)
161 4dwd_A Mandelate racemase/muco 31.9 1.5E+02 0.005 28.3 8.5 43 57-101 173-223 (393)
162 3noy_A 4-hydroxy-3-methylbut-2 31.9 3.3E+02 0.011 25.7 10.5 63 166-243 109-177 (366)
163 1pq3_A Arginase II, mitochondr 31.9 2.1E+02 0.0072 26.0 9.3 94 116-213 165-272 (306)
164 2h9a_B CO dehydrogenase/acetyl 31.8 88 0.003 29.0 6.6 83 36-125 112-208 (310)
165 3b0p_A TRNA-dihydrouridine syn 31.7 2.8E+02 0.0095 25.8 10.3 87 57-148 110-226 (350)
166 3tsm_A IGPS, indole-3-glycerol 31.6 2.7E+02 0.0093 25.1 9.8 83 103-200 130-217 (272)
167 4dye_A Isomerase; enolase fami 31.4 1.6E+02 0.0056 28.0 8.8 107 57-168 195-317 (398)
168 3my9_A Muconate cycloisomerase 31.3 3.1E+02 0.011 25.7 10.7 85 58-147 174-272 (377)
169 1tkk_A Similar to chloromucona 31.3 2E+02 0.0067 26.9 9.2 100 57-160 167-286 (366)
170 2o55_A Putative glycerophospho 31.1 2.7E+02 0.0092 24.4 13.7 101 52-156 143-253 (258)
171 3l0g_A Nicotinate-nucleotide p 31.0 67 0.0023 29.7 5.5 89 64-155 132-244 (300)
172 2gl5_A Putative dehydratase pr 30.9 1.7E+02 0.0057 27.9 8.8 103 58-164 201-321 (410)
173 2pr7_A Haloacid dehalogenase/e 30.8 68 0.0023 24.3 5.0 42 111-154 84-125 (137)
174 1aj0_A DHPS, dihydropteroate s 30.7 2E+02 0.007 26.0 8.8 56 87-145 79-138 (282)
175 2w6r_A Imidazole glycerol phos 30.5 2E+02 0.0069 25.2 8.8 60 87-148 33-104 (266)
176 1mdl_A Mandelate racemase; iso 30.3 3.3E+02 0.011 25.1 11.4 80 57-140 171-262 (359)
177 1i60_A IOLI protein; beta barr 30.3 1.2E+02 0.0041 26.4 7.2 48 195-242 50-97 (278)
178 4fo4_A Inosine 5'-monophosphat 30.2 2.8E+02 0.0096 26.1 10.0 55 105-161 110-172 (366)
179 3jva_A Dipeptide epimerase; en 29.6 1.8E+02 0.0062 27.1 8.6 107 58-168 166-290 (354)
180 1rvk_A Isomerase/lactonizing e 29.6 3.3E+02 0.011 25.4 10.6 43 57-101 182-232 (382)
181 2y5s_A DHPS, dihydropteroate s 29.4 2.4E+02 0.008 25.8 9.0 95 34-139 86-212 (294)
182 2rdx_A Mandelate racemase/muco 29.1 2.6E+02 0.0088 26.2 9.7 19 190-208 274-292 (379)
183 4e38_A Keto-hydroxyglutarate-a 28.9 82 0.0028 27.9 5.6 137 32-198 46-193 (232)
184 2qr6_A IMP dehydrogenase/GMP r 28.9 2.8E+02 0.0095 26.2 9.9 13 146-158 219-231 (393)
185 3ru6_A Orotidine 5'-phosphate 28.6 60 0.0021 30.0 4.8 58 89-147 163-230 (303)
186 2ox4_A Putative mandelate race 28.6 1.3E+02 0.0044 28.7 7.4 99 59-161 193-309 (403)
187 3u0h_A Xylose isomerase domain 28.5 89 0.003 27.4 6.0 52 192-243 85-136 (281)
188 3aty_A Tcoye, prostaglandin F2 28.4 2.5E+02 0.0086 26.6 9.4 82 61-147 230-336 (379)
189 3qc0_A Sugar isomerase; TIM ba 28.4 1E+02 0.0036 26.8 6.4 50 193-242 47-96 (275)
190 1tzz_A Hypothetical protein L1 28.0 3.6E+02 0.012 25.3 10.6 25 59-85 194-219 (392)
191 4g3h_A Arginase (ROCF); rossma 27.8 2.2E+02 0.0077 26.3 8.8 95 116-213 174-280 (330)
192 3l0g_A Nicotinate-nucleotide p 27.7 1.7E+02 0.0058 27.0 7.6 37 98-138 210-246 (300)
193 1r85_A Endo-1,4-beta-xylanase; 27.6 74 0.0025 30.4 5.5 41 191-231 212-254 (379)
194 2cev_A Protein (arginase); enz 27.5 1.7E+02 0.0057 26.6 7.8 94 116-213 164-270 (299)
195 4gib_A Beta-phosphoglucomutase 27.4 38 0.0013 29.6 3.2 19 86-104 121-139 (250)
196 3vni_A Xylose isomerase domain 27.3 2.4E+02 0.0082 24.8 8.8 51 193-243 90-146 (294)
197 2q02_A Putative cytoplasmic pr 27.2 3E+02 0.01 23.7 12.6 19 85-103 20-39 (272)
198 3vcn_A Mannonate dehydratase; 27.2 60 0.0021 31.5 4.8 101 59-163 211-329 (425)
199 3tfx_A Orotidine 5'-phosphate 27.1 81 0.0028 28.4 5.3 58 89-147 149-216 (259)
200 3tr9_A Dihydropteroate synthas 27.1 2.7E+02 0.0091 25.8 8.9 81 34-124 93-199 (314)
201 3tqv_A Nicotinate-nucleotide p 27.0 1.4E+02 0.0048 27.3 6.9 37 98-138 201-237 (287)
202 1gox_A (S)-2-hydroxy-acid oxid 26.9 3.9E+02 0.013 25.0 10.5 80 65-148 217-310 (370)
203 2oz8_A MLL7089 protein; struct 26.8 3.2E+02 0.011 25.7 9.9 99 57-160 172-287 (389)
204 3tji_A Mandelate racemase/muco 26.8 90 0.0031 30.2 6.0 101 58-162 205-323 (422)
205 2oog_A Glycerophosphoryl diest 26.7 3.4E+02 0.012 24.2 15.3 100 49-157 170-279 (287)
206 1bf6_A Phosphotriesterase homo 26.5 3.2E+02 0.011 23.8 10.1 58 89-147 143-208 (291)
207 2cw6_A Hydroxymethylglutaryl-C 26.3 1.5E+02 0.0051 26.9 7.2 16 129-144 82-97 (298)
208 3rmj_A 2-isopropylmalate synth 26.3 4.1E+02 0.014 25.0 12.5 29 189-217 184-216 (370)
209 4a29_A Engineered retro-aldol 26.1 3.3E+02 0.011 24.4 9.0 31 86-116 142-174 (258)
210 3l5l_A Xenobiotic reductase A; 26.1 3.4E+02 0.011 25.4 9.8 83 61-147 211-325 (363)
211 3ik4_A Mandelate racemase/muco 26.1 3.1E+02 0.011 25.6 9.6 100 58-162 171-289 (365)
212 1i60_A IOLI protein; beta barr 25.9 3.2E+02 0.011 23.5 9.5 50 192-243 85-137 (278)
213 4dbe_A Orotidine 5'-phosphate 25.8 80 0.0027 27.6 4.9 57 87-146 125-186 (222)
214 1rqb_A Transcarboxylase 5S sub 25.7 5.1E+02 0.017 25.8 12.8 28 189-217 202-232 (539)
215 3bjs_A Mandelate racemase/muco 25.6 4E+02 0.014 25.4 10.5 39 58-98 212-257 (428)
216 2aeb_A Arginase 1; hydrolase, 25.3 2.2E+02 0.0076 26.1 8.2 94 117-213 170-276 (322)
217 1z41_A YQJM, probable NADH-dep 24.9 3.8E+02 0.013 24.7 9.8 85 57-146 193-306 (338)
218 3r0u_A Enzyme of enolase super 24.7 4.4E+02 0.015 24.7 11.2 106 57-166 168-293 (379)
219 4djd_D C/Fe-SP, corrinoid/iron 24.6 4.2E+02 0.014 24.5 11.2 49 77-125 160-215 (323)
220 2nql_A AGR_PAT_674P, isomerase 24.6 1.8E+02 0.0061 27.5 7.6 100 57-161 191-307 (388)
221 1xfk_A Formimidoylglutamase; f 24.4 2.5E+02 0.0086 26.0 8.5 95 116-213 191-299 (336)
222 3ffs_A Inosine-5-monophosphate 24.2 4.7E+02 0.016 24.9 11.0 27 121-147 249-275 (400)
223 4e8g_A Enolase, mandelate race 24.0 2.7E+02 0.0094 26.3 8.8 108 57-166 191-312 (391)
224 3ugv_A Enolase; enzyme functio 23.9 3.1E+02 0.011 25.9 9.2 17 191-207 308-324 (390)
225 2gdq_A YITF; mandelate racemas 23.8 2.1E+02 0.0072 26.9 7.9 23 182-207 268-290 (382)
226 1chr_A Chloromuconate cycloiso 23.8 2.8E+02 0.0097 25.9 8.8 103 57-164 170-291 (370)
227 1woh_A Agmatinase; alpha/beta 23.7 4.1E+02 0.014 24.1 10.0 102 108-213 163-273 (305)
228 2zvr_A Uncharacterized protein 23.7 1.3E+02 0.0046 26.6 6.3 52 192-243 69-127 (290)
229 3gd6_A Muconate cycloisomerase 23.5 2.1E+02 0.0071 27.1 7.8 104 57-166 168-292 (391)
230 3sl1_A Arginase; metallohydrol 23.3 3.1E+02 0.011 26.4 8.9 93 117-212 263-368 (413)
231 3q45_A Mandelate racemase/muco 23.3 3.3E+02 0.011 25.4 9.2 102 57-162 166-285 (368)
232 3obe_A Sugar phosphate isomera 23.0 1.2E+02 0.0042 27.4 5.9 52 192-243 77-128 (305)
233 3cqj_A L-ribulose-5-phosphate 23.0 1.8E+02 0.0062 25.7 7.0 54 189-242 64-121 (295)
234 1vsq_C Mannose-specific phosph 22.9 1.1E+02 0.0037 25.5 5.0 53 88-142 48-101 (165)
235 3mwc_A Mandelate racemase/muco 22.8 4.6E+02 0.016 24.8 10.2 105 57-166 187-309 (400)
236 3tcs_A Racemase, putative; PSI 22.6 4.5E+02 0.015 24.7 10.0 96 60-159 184-297 (388)
237 1ur1_A Endoxylanase; hydrolase 22.5 81 0.0028 30.1 4.6 40 191-230 209-250 (378)
238 3fv9_G Mandelate racemase/muco 22.4 4.3E+02 0.015 24.9 9.8 107 58-168 177-299 (386)
239 2e6f_A Dihydroorotate dehydrog 22.4 3.4E+02 0.012 24.5 8.9 87 57-147 144-273 (314)
240 2b0c_A Putative phosphatase; a 22.1 82 0.0028 25.8 4.2 43 111-155 158-200 (206)
241 1ur4_A Galactanase; hydrolase, 22.1 5.2E+02 0.018 24.6 12.8 84 99-215 27-112 (399)
242 2z1c_A Hydrogenase expression/ 22.0 42 0.0014 24.1 1.9 14 358-371 33-46 (75)
243 3inp_A D-ribulose-phosphate 3- 21.9 91 0.0031 27.8 4.5 33 66-98 78-110 (246)
244 2poz_A Putative dehydratase; o 21.9 2.9E+02 0.01 26.0 8.5 102 58-163 182-301 (392)
245 1p4c_A L(+)-mandelate dehydrog 21.7 2.7E+02 0.0091 26.3 8.2 78 63-148 215-308 (380)
246 3vnd_A TSA, tryptophan synthas 21.7 3.6E+02 0.012 24.1 8.6 44 59-102 80-129 (267)
247 3nav_A Tryptophan synthase alp 21.7 4.4E+02 0.015 23.6 9.2 45 58-102 81-131 (271)
248 1wa3_A 2-keto-3-deoxy-6-phosph 21.4 96 0.0033 26.2 4.5 98 56-159 19-124 (205)
249 1w32_A Endo-1,4-beta-xylanase 21.4 1.1E+02 0.0038 28.7 5.3 39 191-229 192-232 (348)
250 4hnl_A Mandelate racemase/muco 21.3 1.5E+02 0.005 28.5 6.3 102 58-162 204-322 (421)
251 1wbh_A KHG/KDPG aldolase; lyas 21.3 1.8E+02 0.0061 25.1 6.3 12 185-198 164-175 (214)
252 2y88_A Phosphoribosyl isomeras 21.2 3.7E+02 0.013 23.0 8.6 30 120-149 76-105 (244)
253 3emz_A Xylanase, endo-1,4-beta 21.0 79 0.0027 29.6 4.1 38 193-230 189-228 (331)
254 3tva_A Xylose isomerase domain 20.9 1.5E+02 0.0053 26.1 6.1 55 189-243 49-116 (290)
255 3fcp_A L-Ala-D/L-Glu epimerase 20.7 5.2E+02 0.018 24.1 11.3 17 191-207 282-298 (381)
256 2uwf_A Endoxylanase, alkaline 20.6 94 0.0032 29.3 4.6 38 193-230 204-243 (356)
257 3p3v_A PTS system, N-acetylgal 20.6 1.1E+02 0.0037 25.4 4.5 52 89-142 49-100 (163)
258 3tqv_A Nicotinate-nucleotide p 20.5 1.4E+02 0.0047 27.4 5.5 122 65-210 124-269 (287)
259 3dx5_A Uncharacterized protein 20.5 4.1E+02 0.014 23.1 8.9 50 192-243 85-137 (286)
260 1tx2_A DHPS, dihydropteroate s 20.4 3.7E+02 0.013 24.5 8.5 57 87-146 104-165 (297)
261 1ble_A Fructose permease; phos 20.3 95 0.0033 25.8 4.0 53 88-142 46-99 (163)
262 3pzl_A Agmatine ureohydrolase; 20.1 2E+02 0.0067 26.5 6.6 90 117-213 172-271 (313)
No 1
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=100.00 E-value=6.1e-69 Score=540.05 Aligned_cols=369 Identities=37% Similarity=0.630 Sum_probs=309.7
Q ss_pred eEEEeecCCcHHHHHHHHHhhc--CCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEE
Q 037610 24 RVTTVVTKDELTEFMQSTILKR--QEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFD 101 (405)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~ 101 (405)
.++.++.+.+++++|++++.+. .+.+| |+|+||+++|++|+++|++.+|+++++||+|||+++.|++.+.++|+|||
T Consensus 10 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~t-P~~v~dl~~l~~n~~~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~d 88 (424)
T 7odc_A 10 DCHILDEGFTAKDILDQKINEVSSSDDKD-AFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFD 88 (424)
T ss_dssp EEEEECSSCCHHHHHHHHHC------CCC-CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEE
T ss_pred cEEEecCCCCHHHHHHHHHhhcccCCCCC-cEEEeeHHHHHHHHHHHHHhCCCCeEEEEeccCCcHHHHHHHHHcCCcEE
Confidence 6788889999999999998765 24689 99999999999999999999999999999999999999999999999999
Q ss_pred EcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCC
Q 037610 102 CGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLD 181 (405)
Q Consensus 102 vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~ 181 (405)
|+|.+|++.++++|+++++|+|+||+|++++++.|+++|+..++|||++||++|.+.+++.+++|||+++... ......
T Consensus 89 vaS~~E~~~~~~~G~~~~~Ii~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lRvn~~~~~-~~~~~~ 167 (424)
T 7odc_A 89 CASKTEIQLVQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIATDDSK-AVCRLS 167 (424)
T ss_dssp ECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC-----------
T ss_pred ECCHHHHHHHHHcCCChhhEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCeEEEEECCCCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999767999999999999999999999999987532 223345
Q ss_pred CCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-----------C------
Q 037610 182 SKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN-----------N------ 244 (405)
Q Consensus 182 srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~-----------~------ 244 (405)
+|||+ +.+++.++++.+++.++++.|||||+||++.+.+.|.++++++.++++.+++.|+ +
T Consensus 168 skfG~--~~~~~~~~~~~~~~~~l~l~Glh~H~gsq~~d~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiGGG~~~~~~~~ 245 (424)
T 7odc_A 168 VKFGA--TLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTK 245 (424)
T ss_dssp -CCCB--CHHHHHHHHHHHHHTTCEEEEEECCCCSSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCCCCCSSSSS
T ss_pred CCCCC--CHHHHHHHHHHHHhCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeCCCcCCCCCCC
Confidence 99999 9999999999888889999999999999999999999999999888887765432 0
Q ss_pred -chhHH---HHHHHHHhCC-CCCcEEEECCchhhhccceeEEEEEEEEEEeC--------------CeeEEEEecCCCCC
Q 037610 245 -KMRKL---FKLIFRELLP-GSSLKVISEPGRFFAASAFTLYAQIIGKRVRG--------------ELREYWINDGKFGS 305 (405)
Q Consensus 245 -~~~~l---i~~~l~~~~~-~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~--------------~~~~~~i~dg~~~~ 305 (405)
+++.+ ++..++++|+ .++++|++|||||++++|++|+|+|+++|... .++.|+++||+|++
T Consensus 246 ~~~~~~a~~i~~~~~~~~~~~~~~~ii~EPGR~lva~ag~lv~~V~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~ 325 (424)
T 7odc_A 246 LKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGS 325 (424)
T ss_dssp SCHHHHHHHHHHHHHHHSCGGGTCEEEECCSHHHHGGGEEEEEEEEEEEEEC-------------CCEEEEEESCCTTTT
T ss_pred CCHHHHHHHHHHHHHHHhcccCCcEEEECCCHHhhhhcEEEEEEEEEEEEccccccccccccccCcceEEEEEeCCcCCC
Confidence 12222 5566777776 45799999999999999999999999999742 13568899999999
Q ss_pred ChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCC
Q 037610 306 LAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNG 385 (405)
Q Consensus 306 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~ 385 (405)
+++.+|+.+++.|........ ....++++|+||+|+++|++.+++.||++++||+|+|.++|||+++|+++||+
T Consensus 326 ~~~~ly~~~~~~p~~~~~~~~------~~~~~~~~v~Gp~C~s~D~l~~~~~Lp~l~~GD~l~~~~~GAY~~s~ss~fN~ 399 (424)
T 7odc_A 326 FNCILYDHAHVKALLQKRPKP------DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNG 399 (424)
T ss_dssp THHHHHSCCCCCCEESSCCCT------TCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGG
T ss_pred hhhHhhccCccceeeecCCCC------CCCeeeEEEECCCCCCCCEecccccCCCCCCCCEEEECCCCCCchhhccCCCC
Confidence 999999887753322221111 23457899999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEeCCccc
Q 037610 386 YSTVAIPTYVVRSNQTL 402 (405)
Q Consensus 386 ~~~p~~~~~~~~s~~~~ 402 (405)
+++|+++.+.....|.+
T Consensus 400 ~~~p~~v~~~~~~~~~~ 416 (424)
T 7odc_A 400 FQRPNIYYVMSRPMWQL 416 (424)
T ss_dssp CCCCEEEEEEEHHHHHH
T ss_pred CCCCeEEEEEcchHHHH
Confidence 99998654444455544
No 2
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=100.00 E-value=1.9e-64 Score=513.32 Aligned_cols=360 Identities=39% Similarity=0.646 Sum_probs=310.7
Q ss_pred eEEEeecCCcHHHHHHHHHhhc--CCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEE
Q 037610 24 RVTTVVTKDELTEFMQSTILKR--QEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFD 101 (405)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~--~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~ 101 (405)
++..++.+.++.+++++++.+. ++.+| |+|+||+++|++|+++|++.+++++++||+|||+++.|++.+.++|.||+
T Consensus 20 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~t-P~~viDl~~l~~n~~~l~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~d 98 (471)
T 2oo0_A 20 DCHFLDEGFTAKDILDQKINEVSSSDDKD-AFYVADLGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFD 98 (471)
T ss_dssp CEEEECTTCCHHHHHHHHHHHTTTSSCCC-CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEE
T ss_pred cEEEecCCCCHHHHHHHHHHhhhcCCCCC-cEEEEEHHHHHHHHHHHHHhCCCCeEEEEEeeCCCHHHHHHHHHcCCcEE
Confidence 5788899999999999998775 35799 99999999999999999999999999999999999999999999999999
Q ss_pred EcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCC
Q 037610 102 CGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLD 181 (405)
Q Consensus 102 vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~ 181 (405)
|+|.+|++.++++|+++++|+|+||.|++++++.|+++|+..++|||++||++|.+.+++.+++|||+++.+. ......
T Consensus 99 vaS~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~V~lRvn~g~~~-~~~~~~ 177 (471)
T 2oo0_A 99 CASKTEIQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK-AVCRLS 177 (471)
T ss_dssp ECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEECCCCTT-SSBCCT
T ss_pred EeCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHhCCCCeEEEEEcCCCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999668999999999999988889999999998653 233446
Q ss_pred CCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----------C-------
Q 037610 182 SKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN----------N------- 244 (405)
Q Consensus 182 srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~----------~------- 244 (405)
+|||+ +.+++.++++.+++.++++.|||+|+||++.+.+.|.++++++.++++.+++.|+ .
T Consensus 178 ~RfG~--~~~~~~~~~~~~~~~~l~l~Glh~H~gs~~~~~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiGGG~~~~~~~~ 255 (471)
T 2oo0_A 178 VKFGA--TLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVK 255 (471)
T ss_dssp TTSCB--CHHHHHHHHHHHHHTTCEEEEEEECCCBSCCCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCCCCSSSSSS
T ss_pred CCCCC--CHHHHHHHHHHHHhCCCcEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEECCCcCCCCCCC
Confidence 99999 9999999999888779999999999999988889999999988888887765432 0
Q ss_pred -chhHH---HHHHHHHhCC-CCCcEEEECCchhhhccceeEEEEEEEEEEeC--------------CeeEEEEecCCCCC
Q 037610 245 -KMRKL---FKLIFRELLP-GSSLKVISEPGRFFAASAFTLYAQIIGKRVRG--------------ELREYWINDGKFGS 305 (405)
Q Consensus 245 -~~~~l---i~~~l~~~~~-~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~--------------~~~~~~i~dg~~~~ 305 (405)
+++.+ ++..+.++++ .+++++++||||+++++||+|+++|+++|+.+ ..++|++++|.+++
T Consensus 256 ~~~~~~~~~i~~~l~~~~p~~~~~~li~EpGR~~v~~ag~l~t~V~~vK~~~~~~v~y~~~~~~~~~~~~~~i~~G~~~~ 335 (471)
T 2oo0_A 256 LKFEEITGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 335 (471)
T ss_dssp SCHHHHHHHHHHHHHHHSCGGGTCEEEECCSHHHHGGGEEEEEEEEEEEEEC-------------CCEEEEEESCCTTTG
T ss_pred CCHHHHHHHHHHHHHHHhcccCCcEEEecCccceecCcEEEEEEEEEEEecCccccccccccccCCceEEEEEECCcccc
Confidence 12222 5556777776 35789999999999999999999999999853 13578899999999
Q ss_pred ChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCC
Q 037610 306 LAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNG 385 (405)
Q Consensus 306 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~ 385 (405)
+++.+|+.+++.+..+..... ....++++|+||+||++|+++.++.+|++++||+|+|.++|||+++|+++||+
T Consensus 336 ~~~~L~~~~~~~~vl~~~~~~------~~~~~~~~I~G~~C~s~D~l~~d~~lp~l~~GD~l~~~~~GAY~~s~~s~fN~ 409 (471)
T 2oo0_A 336 FNCILYDHAHVKPLLQKRPKP------DEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNG 409 (471)
T ss_dssp GGHHHHSCCCCCCEESSCCCT------TCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGG
T ss_pred hhhHhhccCcceeeeccCCCC------CCCeeEEEEECCCCCCCCEEeeccCCCCCCCCCEEEEeCCCcchhhhhccccC
Confidence 999999887643222221111 12347899999999999999999999999999999999999999999999999
Q ss_pred CCCCCceE
Q 037610 386 YSTVAIPT 393 (405)
Q Consensus 386 ~~~p~~~~ 393 (405)
+++|+++.
T Consensus 410 ~~~p~~v~ 417 (471)
T 2oo0_A 410 FQRPTIYY 417 (471)
T ss_dssp CCCCEEEE
T ss_pred CCCCeEEE
Confidence 99997543
No 3
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=100.00 E-value=5.2e-64 Score=507.82 Aligned_cols=363 Identities=34% Similarity=0.578 Sum_probs=301.4
Q ss_pred eEEEeecCCcHHHHHHHHHhhc-CCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEE
Q 037610 24 RVTTVVTKDELTEFMQSTILKR-QEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDC 102 (405)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~-~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~v 102 (405)
++..++.+.++.+++++++.+. ...+| |+|+||+++|++|+++|++.+++++++||+|||+++.|++.+.++|+||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t-P~~vid~~~l~~n~~~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~~v 89 (448)
T 3btn_A 11 SVGLLDEGTNLGNVIDNYVYEHTLTGKN-AFFVGDLGKIVKKHSQWQTVVAQIKPFYTVKCNSTPAVLEILAALGTGFAC 89 (448)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHHHSSCC-CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHHTCEEEE
T ss_pred eEEEecCCCcHHHHHHHHHHhcccCCCC-CEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEE
Confidence 4678889999999999998764 34789 999999999999999999999989999999999999999999999999999
Q ss_pred cCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCC
Q 037610 103 GSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDS 182 (405)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~s 182 (405)
+|.+|++.++++|+++++|+|+||.|++++++.|+++|+..++|||++||++|.+.++..+++|||+++.+. ......+
T Consensus 90 aS~~E~~~~~~aG~~~~~iv~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lRin~g~~~-~~~~~~~ 168 (448)
T 3btn_A 90 SSKNEMALVQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNI-GGEDGNM 168 (448)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTTCEEEEEBCCCC---------C
T ss_pred eCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHHhCCCCeEEEEEecCCCc-cCCCCCC
Confidence 999999999999999999999999999999999999998668999999999999988889999999998653 2233459
Q ss_pred CCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----------C-----chh
Q 037610 183 KYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN----------N-----KMR 247 (405)
Q Consensus 183 rfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~----------~-----~~~ 247 (405)
|||+ +.+++.++++.+++.++++.|||+|+||++.+.+.|.++++++.++++.+++.|+ . +++
T Consensus 169 RfG~--~~~~~~~~~~~~~~~~l~~~Gl~~H~gs~~~d~~~~~~~~~~~~~~~~~~~~~G~~~~~ldiGGG~~~~~~~~~ 246 (448)
T 3btn_A 169 KFGT--TLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEIQLE 246 (448)
T ss_dssp CCCB--CHHHHHHHHHHHHHHTCEEEEEECCCCTTCCCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECCSCCCSCHHHHH
T ss_pred cCCC--CHHHHHHHHHHHHhCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeCCCcCCCCCCHH
Confidence 9999 9999999998887779999999999999988888899999988888887776543 1 122
Q ss_pred HH---HHHHHHHhCC-CCCcEEEECCchhhhccceeEEEEEEEEEEeCC---------------eeEEEEecCCCCCChh
Q 037610 248 KL---FKLIFRELLP-GSSLKVISEPGRFFAASAFTLYAQIIGKRVRGE---------------LREYWINDGKFGSLAW 308 (405)
Q Consensus 248 ~l---i~~~l~~~~~-~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~---------------~~~~~i~dg~~~~~~~ 308 (405)
.+ ++..+.++++ .+++++++||||++++++++|+++|+++|..+. ...|+++||++.++++
T Consensus 247 ~~~~~v~~~i~~~~p~~~~~~l~~EpGR~~v~~ag~l~t~V~~vK~~~~g~~vsyg~~~~~~~~~~~~~i~~G~~d~~~~ 326 (448)
T 3btn_A 247 EVNHVISPLLDIYFPEGSGIQIISEPGSYYVSSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFAS 326 (448)
T ss_dssp HHHHHHHHHHHHHSCTTSCCEEEECCSHHHHTTTEEEEEEEEEEEEC-----------------CEEEEESCCTTTTTGG
T ss_pred HHHHHHHHHHHHHhcccCCcEEEEeCCcceeeeeEEEEEEEEEEEecccccccccccccccCCceEEEEEccccccccch
Confidence 21 4556667776 357899999999999999999999999998431 1246788998899999
Q ss_pred hhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCC
Q 037610 309 VTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYST 388 (405)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~ 388 (405)
.+|+.+++.+..+..... ....++++|+||+||++|+++.++.+|++++||+|+|.++|||+++|+++||++++
T Consensus 327 ~l~~~~~~~~vl~~~~~~------~~~~~~~~v~G~~C~s~D~l~~d~~lp~l~~GD~l~~~~~GAY~~~~~s~fN~~~~ 400 (448)
T 3btn_A 327 KLSEDLNTIPEVHKKYKE------DEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQR 400 (448)
T ss_dssp GGC----CCCEECCC-----------CEEEEEEECTTCSTTCEEEEEEEEECCCTTCEEEESSCCSSCCCCCCGGGTTCC
T ss_pred hhhccCcceeeeccCCCC------CCCceEEEEECCCCCCCCEEeeccccCCCCCCCEEEEcCCCCCchhhcccccCCCC
Confidence 998887643222221110 12346899999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEE
Q 037610 389 VAIPTYVV 396 (405)
Q Consensus 389 p~~~~~~~ 396 (405)
|+++.+..
T Consensus 401 p~~v~~~~ 408 (448)
T 3btn_A 401 PAIYFMMS 408 (448)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEc
Confidence 98644433
No 4
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=100.00 E-value=5.1e-63 Score=497.95 Aligned_cols=356 Identities=37% Similarity=0.665 Sum_probs=297.5
Q ss_pred EEEeecCCcHHHHHHHHHhhc-CCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEc
Q 037610 25 VTTVVTKDELTEFMQSTILKR-QEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCG 103 (405)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~va 103 (405)
+..+ .+.++.+++++.+.+. .+++| |+|+||+++|++|+++|++.+++++++|++|||+++.|++.+.++|.||+|+
T Consensus 13 ~~~~-~~~~~~~~~~~~~~~~~~~~~t-P~~vidl~~l~~n~~~~~~~~~~~~~~~avKAn~~~~v~~~l~~~G~g~~va 90 (425)
T 1f3t_A 13 CRFL-EGFNTRDALCKKISMNTCDEGD-PFFVADLGDIVRKHETWKKCLPRVTPFYAVKCNDDWRVLGTLAALGTGFDCA 90 (425)
T ss_dssp -CBC-CCSSHHHHHHHHCC------CC-CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEEC
T ss_pred EEEe-cCCcHHHHHHHHHHhcccCCCC-cEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEEe
Confidence 4556 8899999999998665 34789 9999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCC
Q 037610 104 SRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSK 183 (405)
Q Consensus 104 S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~sr 183 (405)
|.+|++.++++|+++++|+|+||.|++++++.|+++|+..++|||++||++|.+.+++.+++|||+++.+. ......+|
T Consensus 91 s~~E~~~~~~~G~~~~~iv~~g~~k~~~~l~~a~~~gv~~~~vds~~el~~l~~~~~~~~v~lrid~g~~~-~~~~~~~R 169 (425)
T 1f3t_A 91 SNTEIQRVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRISTDDSL-ARCRLSVK 169 (425)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCTTCEEEEEBCC-----------CC
T ss_pred CHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCcEEEEEcCCCCC-ccCCCCCc
Confidence 99999999999999999999999999999999999999658999999999999988889999999987543 22334599
Q ss_pred CCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----------C--------c
Q 037610 184 YGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN----------N--------K 245 (405)
Q Consensus 184 fGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~----------~--------~ 245 (405)
||+ +.+++.++++.+++.++++.|||+|+||++.+.+.|.++++++.++++.+++.|+ . +
T Consensus 170 fG~--~~~~~~~~~~~~~~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~iGGG~~~~~~~~~~ 247 (425)
T 1f3t_A 170 FGA--KVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLK 247 (425)
T ss_dssp SCB--CHHHHHHHHHHHHHTTCEEEEEECCCCSCCSCTHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCCCSSTTSSSC
T ss_pred CCC--CHHHHHHHHHHHHhCCCeEEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeCCCcCCCCCCCCC
Confidence 999 9999999999888779999999999999988888898898888888887776543 0 1
Q ss_pred hhHH---HHHHHHHhCC-CCCcEEEECCchhhhccceeEEEEEEEEEEeC--------------CeeEEEEecCCCCCCh
Q 037610 246 MRKL---FKLIFRELLP-GSSLKVISEPGRFFAASAFTLYAQIIGKRVRG--------------ELREYWINDGKFGSLA 307 (405)
Q Consensus 246 ~~~l---i~~~l~~~~~-~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~--------------~~~~~~i~dg~~~~~~ 307 (405)
++.+ ++..+..+++ .+++++++||||++++++++|+|+|+++|+.. .+++|++++|.+++++
T Consensus 248 ~~~~~~~vr~~i~~~~~~~~~~~l~~EpGR~~v~~a~~l~t~V~~vK~~~~g~~~v~g~~~~~~~~~~~~i~~G~~d~~~ 327 (425)
T 1f3t_A 248 FEEIAGVINNALEKHFPPDLKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFN 327 (425)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCEEEECCSHHHHGGGEEEEEEEEEEEEC---------------CCEEEEESCCTTTGGG
T ss_pred HHHHHHHHHHHHHHhcCcCCCcEEEEeCCceeeeeeEEEEEEEEEEEeccccccccccccccCcceEEEEEeccccccch
Confidence 2212 5566777776 45789999999999999999999999999842 1367889999999999
Q ss_pred hhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCC
Q 037610 308 WVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYS 387 (405)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~ 387 (405)
+.+|+.+++.+..+..... ....++++|+||+||++|+++.++.+|++++||+|+|.++|||+++|+++||+++
T Consensus 328 ~~l~~~~~~~~vl~~~~~~------~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~s~~s~fn~~~ 401 (425)
T 1f3t_A 328 CILYDHAVVRPLPQREPIP------NEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQ 401 (425)
T ss_dssp HHHHSCCCCCCEECSCCCT------TCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGCC
T ss_pred hhhhcccccceeeecCCCC------CCCeeEEEEEcCCcCCCCEecccccCCCCCCCCEEEEcCCCCCchhhcccccCCC
Confidence 9999877642222221111 1234789999999999999999999999999999999999999999999999999
Q ss_pred CCCc
Q 037610 388 TVAI 391 (405)
Q Consensus 388 ~p~~ 391 (405)
+|.+
T Consensus 402 ~p~v 405 (425)
T 1f3t_A 402 SPTI 405 (425)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 9954
No 5
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=5.3e-63 Score=499.31 Aligned_cols=365 Identities=21% Similarity=0.328 Sum_probs=296.9
Q ss_pred CCCCCceeeecccccCCceEEEeecCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCCC--Cceeeeecc
Q 037610 6 KGTPSTLLHLDAQVMGGQRVTTVVTKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPM--IHPHYAVKC 83 (405)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~~--~~i~yavKa 83 (405)
.|+|+|..+. ....| ++. ..+..+.+++++ ++| |+|+||+++|++|+++|++.+++ ++++|++||
T Consensus 17 ~~~~~~~~~~--~~~~~-~l~--~~~~~l~~la~~-------~~t-P~~vid~~~l~~n~~~l~~~~~~~~~~i~yavKA 83 (443)
T 3vab_A 17 QGPGSMVNHF--EYRNG-VLH--AENVSLPEIAKA-------VGT-PFYVYSRATIERHFRVFHDAFADMDTLVTYALKA 83 (443)
T ss_dssp -CCGGGCCSE--EEETT-EEE--ETTEEHHHHHHH-------HCS-SEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGG
T ss_pred cCCCcccccc--eeeCC-EEE--ECCeeHHHHHhh-------cCC-CEEEEEHHHHHHHHHHHHHhhccCCcEEEEEecc
Confidence 4566665544 22222 222 256777777665 469 99999999999999999999985 789999999
Q ss_pred CCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHC----
Q 037610 84 NPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWH---- 159 (405)
Q Consensus 84 N~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~---- 159 (405)
|+++.|++.+.+.|+||+|+|.+|++.++++|+++++|+|+||+|++++++.|+++|+..++|||++|+++|.+.+
T Consensus 84 n~~~~v~~~l~~~G~g~dvaS~~E~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~a~~~~ 163 (443)
T 3vab_A 84 NSNQAVLTALAKLGAGADTVSQGEIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAG 163 (443)
T ss_dssp CCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEEECTTCCHHHHHHHHHHTCSEEEECCHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCCcEEEeCHHHHHHHHHcCCChhhEEEcCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999768999999999998753
Q ss_pred CCCeEEEEEecCCCC--CCCCCCC---CCCCCCCChhhHHHHHHHHHHc-CCeEEEEEEecCCCCCCHHHHHHHHHHHHH
Q 037610 160 PKSDLLIRIKSPDDS--GAKYPLD---SKYGAGHHPQEIMPLLKAAEAS-GLSVVGVSFHVGSEATNFAAFRGAIAAAKA 233 (405)
Q Consensus 160 ~~~~v~lRi~~~~~~--~~~~~~~---srfGi~~~~~e~~~~~~~~~~~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~ 233 (405)
+..+++||||++.+. +.+++++ +|||+ +.+++.++++.+++. ++++.|||+|+||++.+.+.|.++++++.+
T Consensus 164 ~~~~V~lRVn~~~~~~~~~~i~tG~~~sRfGi--~~~e~~~ll~~~~~~~~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~ 241 (443)
T 3vab_A 164 KVAPVSLRINPDVDAKTHAKISTGKSENKFGI--PRDKARAAYARAASLPGLNVVGIDMHIGSQIIDLEPFDNAFALMAE 241 (443)
T ss_dssp CCEEEEEEEECCBCTTTCCBC---CCCCSSSE--EGGGHHHHHHHHHHSTTEEEEEEECCCCSSBCCSHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCCCCCcccccCCCCCCCcC--CHHHHHHHHHHHhhCCCceEEEEEEeccCCCCCHHHHHHHHHHHHH
Confidence 458999999998654 3456665 89999 899999999988774 799999999999998899999999999999
Q ss_pred HHHHHHhCCCCchhH--------------------H--HHHHHHHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeC
Q 037610 234 VFDTAARTSNNKMRK--------------------L--FKLIFRELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRG 291 (405)
Q Consensus 234 ~~~~~~~~G~~~~~~--------------------l--i~~~l~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~ 291 (405)
+++.+++.|+ ++++ + +.+.+.+.+...+++|++|||||++++|++|+++|+++|+.+
T Consensus 242 l~~~l~~~G~-~l~~ldiGGG~~i~y~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~EPGR~lva~ag~lv~~V~~~K~~~ 320 (443)
T 3vab_A 242 LVKELQADGH-NIRHVDVGGGLGIPYRTPNTPPPPPVAYAQIVAKHIKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGD 320 (443)
T ss_dssp HHHHHHHTTC-CCCEEECCCCBCCCCCCC---CCCHHHHHHHHHHHHGGGCSEEEECCSHHHHGGGEEEEEEEEEEEECS
T ss_pred HHHHHHHcCC-CCCEEEeCCCcccCcCCCCCCCCCHHHHHHHHHHHHHhcCCEEEEecCHHHhhcccEEEEEEEEEEecC
Confidence 9988765332 1111 1 334444444333689999999999999999999999999864
Q ss_pred CeeEEEEecCCCC-CChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEc
Q 037610 292 ELREYWINDGKFG-SLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFS 370 (405)
Q Consensus 292 ~~~~~~i~dg~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~ 370 (405)
+++|+++||+++ .++|.+|+.++.. .++..... ....++++|+||+|+++|++.+++.+|++++||+|+|.
T Consensus 321 -~~~~~~vD~gm~~~~rp~ly~~~~~~-~~~~~~~~------~~~~~~~~v~Gp~C~s~D~l~~~~~lp~l~~GD~l~~~ 392 (443)
T 3vab_A 321 -AKNFVIVDAAMNDLIRPTLYDAFHDI-RPVIMPND------NAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAIC 392 (443)
T ss_dssp -SCEEEEESCCTTTCCHHHHHCCCCCE-EESBCCCT------TSCEEEEEEECSSSSTTCEEEEEEEEECCCTTCEEEEE
T ss_pred -CeeEEEEccccccccchHHhCcccee-EEcccCCC------CCCceEEEEEccCCCCCCEEeeccCcCCCCCCCEEEEe
Confidence 378888887654 4567888877632 23322111 23567899999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCCCCceEE
Q 037610 371 EMGAYTTACGTNFNGYSTVAIPTY 394 (405)
Q Consensus 371 ~~GAY~~~~~~~fn~~~~p~~~~~ 394 (405)
++|||+++|+++||++|+|+++++
T Consensus 393 ~~GAY~~~~ss~fN~~~~p~~v~v 416 (443)
T 3vab_A 393 TTGAYGAVLSSTYNSRLLIPEVLG 416 (443)
T ss_dssp SCTTTTGGGCCCGGGCCCCCEEEE
T ss_pred CCCcCchhhhccccCCCCCcEEEE
Confidence 999999999999999999996543
No 6
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=100.00 E-value=1.2e-61 Score=489.01 Aligned_cols=343 Identities=23% Similarity=0.319 Sum_probs=283.5
Q ss_pred cCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCCC--CceeeeeccCCcHHHHHHHHHcCCeEEEcCHHH
Q 037610 30 TKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPM--IHPHYAVKCNPEPALLEALAALGSNFDCGSRSE 107 (405)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~~--~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E 107 (405)
.+.++.+++++ ++| |+|+||+++|++|+++|++.+++ ++++|++|||+++.|++.+.++|+||+|+|.+|
T Consensus 39 ~~~~l~~la~~-------~~T-P~~vidl~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dvaS~~E 110 (441)
T 3n2b_A 39 EQVPLADLANQ-------YGT-PLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 110 (441)
T ss_dssp TTEEHHHHHHH-------HCS-SEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHH
T ss_pred CCccHHHHHhh-------cCC-CEEEEEHHHHHHHHHHHHHhhccCCcEEEEEeccCCCHHHHHHHHHcCCcEEEeCHHH
Confidence 45677777655 479 99999999999999999999985 789999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--CCCCCC
Q 037610 108 IEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSG--AKYPLD 181 (405)
Q Consensus 108 ~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~--~~~~~~ 181 (405)
++.++++|+++++|+|+||+|++++++.|+++|+..++|||++||++|.+. .+..+++||||++.+.+ .+++++
T Consensus 111 ~~~~~~~G~~~~~I~~~g~~k~~~ei~~a~~~gv~~~~vds~~el~~l~~~a~~~~~~~~V~lRvn~~~~~~~~~~i~tG 190 (441)
T 3n2b_A 111 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTG 190 (441)
T ss_dssp HHHHHHTTCCGGGEEECCTTCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHH
T ss_pred HHHHHHcCCCcccEEEcCCCCCHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHhcCCCcEEEEEeccCCCcCCCcccccC
Confidence 999999999999999999999999999999999976899999999999875 46789999999987542 234443
Q ss_pred ---CCCCCCCChhhHHHHHHHHHH-cCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhHH--------
Q 037610 182 ---SKYGAGHHPQEIMPLLKAAEA-SGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSNNKMRKL-------- 249 (405)
Q Consensus 182 ---srfGi~~~~~e~~~~~~~~~~-~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l-------- 249 (405)
+|||+ +.+++.++++.+++ +++++.|||+|+||++.+.+.|.++++++.++++.+++.|+ ++++|
T Consensus 191 ~~~sKfG~--~~~~~~~~~~~~~~~~~l~l~Glh~H~gs~~~d~~~~~~a~~~~~~l~~~l~~~G~-~l~~LdiGGG~gi 267 (441)
T 3n2b_A 191 LRDNKFGI--TFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGI-HIRHLDVGGGLGV 267 (441)
T ss_dssp HHTSSSSB--CGGGHHHHHHHHHHCTTEEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTTC-CCCEEECCSCCCE
T ss_pred CCCCcccC--CHHHHHHHHHHHhcCCCeEEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHcCC-CCCEEEECCCccc
Confidence 89999 99999999998877 58999999999999999999999999999999988875442 22221
Q ss_pred ------------HHHHHHHhCCC-CCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCC-CChhhhhhccc
Q 037610 250 ------------FKLIFRELLPG-SSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFG-SLAWVTCDEAI 315 (405)
Q Consensus 250 ------------i~~~l~~~~~~-~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~-~~~~~~~~~~~ 315 (405)
+.+.+.+.+.. .+++|++||||+++++|++|+++|+++|+.+ +++|+++||+++ .++|.+|+.++
T Consensus 268 ~y~~~~~~~~~~~~~~i~~~l~~~~~~~l~~EPGR~lva~ag~lv~~V~~~K~~~-~~~~~~vD~gm~~~~rp~ly~~~~ 346 (441)
T 3n2b_A 268 VYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTE-HKNFAIIDAAMNDLIRPALYQAWQ 346 (441)
T ss_dssp EC-----CEECHHHHHHHHHHTTTCCSEEEECCSHHHHGGGEEEEEEEEEEEEC---CEEEEESCCTTTCCC-------C
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhccCCEEEEeCCHHHHhhccEEEEEEEEEEecC-CceEEEEccccccccchHHhCccc
Confidence 34445444442 4789999999999999999999999999864 378888887654 34677888766
Q ss_pred cccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceEE
Q 037610 316 AKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPTY 394 (405)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~~ 394 (405)
. ..|+.. . ....++++|+||+|+++|++.+++.+ ++++||+|+|.++|||+++|+++||++|+|+++++
T Consensus 347 ~-~~~~~~--~------~~~~~~~~v~Gp~C~s~D~l~~~~~l-~l~~GD~l~~~~~GAY~~~~ss~fN~~~~p~~v~v 415 (441)
T 3n2b_A 347 D-IIPLRP--R------QGEAQTYDLVGPVCETSDFLGKDRDL-VLQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMV 415 (441)
T ss_dssp C-EEESSC--C------SSCCEEEEEECSSSSTTCEEEEEEEE-CCCTTCEEEESSCSSSSGGGCBCTTTCCCCEEEEE
T ss_pred c-eEEccC--C------CCCceeEEEECCcCCCCCEEeecccc-CCCCCCEEEEeCCCcCchhhhccccCCCCCcEEEE
Confidence 3 233321 1 22457899999999999999999988 89999999999999999999999999999996543
No 7
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=100.00 E-value=3.9e-60 Score=469.44 Aligned_cols=347 Identities=33% Similarity=0.578 Sum_probs=291.4
Q ss_pred HHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhC
Q 037610 35 TEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLL 114 (405)
Q Consensus 35 ~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~ 114 (405)
..++++++++.++++| |+|+||+++|++|+++|++.+++++++|++|||+++.|++.+.+.|+||+|+|.+|++.++++
T Consensus 2 ~~~~~~l~~~~~~~~t-P~~vidl~~l~~N~~~l~~~~~~~~~~~~vKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~ 80 (372)
T 2nva_A 2 NSVVNNILKAHPHQTK-SFYVSSPKIVEDLIDQWTILFPRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQI 80 (372)
T ss_dssp HHHHHHHHHHCTTCCS-EEEEECHHHHHHHHHHHHHHCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHH
T ss_pred cHHHHHHHHhcCCCCC-CEEEEeHHHHHHHHHHHHHhCCCCeEEEEeeeCCCHHHHHHHHHcCCcEEEcCHHHHHHHHHc
Confidence 4567777766446899 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHH
Q 037610 115 DVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIM 194 (405)
Q Consensus 115 G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~ 194 (405)
|+++++|+|.||.|++++++.|+++|+..++|||.+|+++|.+.+++.++.|||+++++ +..+++++|||+ +.+++.
T Consensus 81 G~~~~~I~~~~~~k~~~~l~~a~~~~v~~~~vds~~~l~~l~~~~~~~~v~lrv~~~~~-~~~~~~~~R~G~--~~~~~~ 157 (372)
T 2nva_A 81 GVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPNCKMILRIRCDDP-NATVQLGNKFGA--NEDEIR 157 (372)
T ss_dssp TCCGGGEEECCSCCCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTTCEEEEEBCCCCT-TCSBCCTTTSSB--CGGGHH
T ss_pred CCCHHHEEECCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhCCCCeEEEEEecCCC-CCcccCCCCCCC--CHHHHH
Confidence 99988899999999999999999999865899999999999998888999999999886 466778899999 899999
Q ss_pred HHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----------Cc--------hhHH---HHHH
Q 037610 195 PLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN----------NK--------MRKL---FKLI 253 (405)
Q Consensus 195 ~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~----------~~--------~~~l---i~~~ 253 (405)
++++.+++.++++.|+|+|+||+..+.+.+.++++++.++++.+++.|+ .. ++.. ++..
T Consensus 158 ~~~~~~~~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~GGg~~~~~~~~~~~~~~~~~vr~~ 237 (372)
T 2nva_A 158 HLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDA 237 (372)
T ss_dssp HHHHHHHHTTCCEEEEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECCSCBCCCCC---CCCHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCCCcCCCCCCCHHHHHHHHHHH
Confidence 9999887779999999999999988888888899998888887764332 01 1111 4555
Q ss_pred HHHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEec-CCCCCChhhhhhccccccccCCCCCCCCccCC
Q 037610 254 FRELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWIND-GKFGSLAWVTCDEAIAKCTPLPFASSFTTSKG 332 (405)
Q Consensus 254 l~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~d-g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (405)
+..+++...+++++||||++++++++++|+|+++|+.++ ++++++| |.+.++.+.+|+.++..+..+.....
T Consensus 238 i~~y~~~~~~~~~~epGr~~~~~a~~l~t~V~~vk~~~g-~~~~~vd~G~~d~~~~~l~~~~~~~~v~~~~~~~------ 310 (372)
T 2nva_A 238 IKDFFPEDTVTIVAEPGRFFAEHYSVLATQVIGKRVRDG-LYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPD------ 310 (372)
T ss_dssp HHHHCCCTTCEEEECCSHHHHGGGEEEEEEEEEEEEETT-EEEEEESCCTTTTCTHHHHSCCCCCCEESSCCCT------
T ss_pred HHHhcCcCCCEEEEccChhHhhceEEEEEEEEEEEEeCC-cEEEEECCCccccchHhhhcccCccceeccCccC------
Confidence 666765324789999999999999999999999998653 5666655 55567788887765421111111101
Q ss_pred CCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCce
Q 037610 333 LTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIP 392 (405)
Q Consensus 333 ~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~ 392 (405)
..+.++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|.++
T Consensus 311 ~g~~~~~~i~G~~C~~~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~~~fn~~~~p~~~ 370 (372)
T 2nva_A 311 DEEYVPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVY 370 (372)
T ss_dssp TCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEESSCCSSSGGGCCCGGGCCCEEEE
T ss_pred CCCcceEEEEeCCcCCCCEEcccccCCCCCCCCEEEEcCCCCCchhhhccccCCCCCcEE
Confidence 112378999999999999999999999999999999999999999999999999999753
No 8
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus} PDB: 2plk_A*
Probab=100.00 E-value=3.9e-58 Score=461.30 Aligned_cols=352 Identities=28% Similarity=0.469 Sum_probs=282.6
Q ss_pred CceEEEeecC-CcHHHH--HHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC
Q 037610 22 GQRVTTVVTK-DELTEF--MQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS 98 (405)
Q Consensus 22 ~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~ 98 (405)
...++++..+ -.++++ +++++. +++| |+|+||+++|++|+++|++.+++++++|++|||+++.|++.+.+.|.
T Consensus 27 ~~~~~~~~~~~l~~~~~~~~~~l~~---~~~t-P~~vidl~~l~~N~~~l~~~~~~~~i~~avKAn~~~~v~~~l~~~G~ 102 (419)
T 2plj_A 27 IFDIHSLTSPVLSAEEIHLIEASVE---QFGA-PLLLLDCDVIRQQYRALKNALPNVTLHYALKPLPHPVVVRTLLAEGA 102 (419)
T ss_dssp CSCCC----CCCCHHHHHHHHHHHH---HHCS-SEEEEEHHHHHHHHHHHHHHSTTEEEEEESTTCCCHHHHHHHHHHTC
T ss_pred ccceeecCCCceeccChHHHHHHHH---hcCC-CEEEEeHHHHHHHHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHcCC
Confidence 3355566542 445553 566644 4789 99999999999999999999999999999999999999999999999
Q ss_pred eEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 037610 99 NFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKY 178 (405)
Q Consensus 99 g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~ 178 (405)
||+|+|.+|++.++++|+++++|+|.||.|++++++.|+++|+..++|||++|+++|.+.+++.+++|||+++.+ +..+
T Consensus 103 g~~vas~~E~~~~r~~G~~~~~Il~~g~~k~~~~l~~a~~~~v~~~~vds~~el~~l~~~a~~~~v~lrvd~g~~-~~~~ 181 (419)
T 2plj_A 103 SFDLATTGEVELVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSFRNS-EAFA 181 (419)
T ss_dssp EEEECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHHTCCEEEECSHHHHHTTGGGTTTCEEEEEBCC--------
T ss_pred cEEEeCHHHHHHHHHcCCChhhEEEeCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhcCCCCEEEEEcCCCC-CCCC
Confidence 999999999999999999988899999999999999999999866899999999999998888999999998754 2344
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCchh-----------
Q 037610 179 PLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSNNKMR----------- 247 (405)
Q Consensus 179 ~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~~~~~----------- 247 (405)
...+|||+ +.+++.++++.+++.++++.|||+|+||++.+.+.+.++++++.++++.+++.|+++++
T Consensus 182 ~~~~RfG~--~~~e~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~l~~GGG~~~~ 259 (419)
T 2plj_A 182 DLSKKFGC--SPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVN 259 (419)
T ss_dssp --CCCSCB--CHHHHHHHHHHHHHTTCEEEEEECCCCTTCCCTHHHHHHHHHHHHHHHHHHHTTCCCCCEEECCCCCCCC
T ss_pred CCCCCCcC--CHHHHHHHHHHHHhCCCcEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEECCCcCcC
Confidence 45699999 99999999998877799999999999999878888888999998888877654420111
Q ss_pred ---------HH---HHHHHHHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEec-CCCCCChhhhhhcc
Q 037610 248 ---------KL---FKLIFRELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWIND-GKFGSLAWVTCDEA 314 (405)
Q Consensus 248 ---------~l---i~~~l~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~d-g~~~~~~~~~~~~~ 314 (405)
.. ++..+.. |+. .+++++||||++++++++++|+|+++|+.++ ++++++| |.+.++.+.+|+.+
T Consensus 260 y~~~~~~~~~~~~~vr~~i~~-y~~-~~~~~~EpGr~~~~~a~~l~t~V~~vk~~~g-~~~~~vd~G~~d~~~~~l~~~~ 336 (419)
T 2plj_A 260 YTQQVMPIDQFCAPINEALSL-LPE-TVHVLAEPGRFICAPAVTSVASVMGQAEREG-QIWYYLDDGIYGSFSGLMFDDA 336 (419)
T ss_dssp SSSCCCCHHHHHHHHHHHHTT-SCT-TCEEEECCCHHHHGGGEEEEEEEEEEEEETT-EEEEEESCCTTTGGGHHHHSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHh-CCC-CCEEEEcCCHHHhhhcEEEEEEEEEEEeECC-eEEEEEcCccccchHHHHhccc
Confidence 11 2223333 432 4789999999999999999999999998643 5666665 55567777777764
Q ss_pred ccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCce
Q 037610 315 IAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIP 392 (405)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~ 392 (405)
+.+.. + ... ..++++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|+++
T Consensus 337 ~~~v~-~-~~~-------~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v 405 (419)
T 2plj_A 337 RYPLT-T-IKQ-------GGELIPSVLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTI 405 (419)
T ss_dssp CCCEE-E-SCC-------SSCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEESSCSSSSGGGCBCGGGCCCCEEE
T ss_pred cceEE-e-cCC-------CCCceeEEEEcCCcCCCCeeeecccCCCCCCCCEEEEeCCCCchhhhhhhhcCCCCCeEE
Confidence 32111 1 111 124578999999999999999999999999999999999999999999999999999853
No 9
>3mt1_A Putative carboxynorspermidine decarboxylase prote; PSI2, MCSG, structural genomics; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.3e-59 Score=462.16 Aligned_cols=317 Identities=15% Similarity=0.136 Sum_probs=251.2
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhC--CCCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNL--PMIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~--~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
++| |+||||+++|++|+++|++.+ ++++++||+|||+++.|++.+.++|+||||+|.+|++.+++. + +++|+|.|
T Consensus 2 ~gt-P~yv~d~~~l~~n~~~l~~~~~~~~~~i~yavKAn~~~~v~~~l~~~G~g~dvaS~~E~~~~~~~-~-~~~ii~~~ 78 (365)
T 3mt1_A 2 IET-PYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSLFEVRLGRER-F-GKETHAYS 78 (365)
T ss_dssp CCS-SEEEEEHHHHHHHHHHHHHHHHHHCCEEEEETTTCCCGGGHHHHTTTSCEEEESSHHHHHHHHHH-T-CSEEEEEE
T ss_pred CCC-CEEEEeHHHHHHHHHHHHHHHhhcCCEEEEEehhcCCHHHHHHHHHhCCeEEECCHHHHHHHHhh-C-CCceEEEC
Confidence 578 999999999999999999988 489999999999999999999999999999999999999985 7 46899999
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCC--CCCCCCC---CCCCCCCChhhHHHHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDS--GAKYPLD---SKYGAGHHPQEIMPLLKAA 200 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~--~~~~~~~---srfGi~~~~~e~~~~~~~~ 200 (405)
|+|++++++.|+++|+ .+++||++||++|.+.+++.+++|||||+.+. +.+++++ +|||+ +.+++.+.
T Consensus 79 ~~k~~~el~~a~~~g~-~i~vds~~el~~l~~~a~~~~v~lRvnp~~~~~~~~~i~tg~~~sKFG~--~~~~~~~~---- 151 (365)
T 3mt1_A 79 VAYGDNEIDEVVSHAD-KIIFNSISQLERFADKAAGIARGLRLNPQVSSSSFDLADPARPFSRLGE--WDVPKVER---- 151 (365)
T ss_dssp SCCCTTTHHHHHHHCS-EEEESSHHHHHHHGGGGTTSEEEEEECCC----------------CCSB--CCHHHHHT----
T ss_pred CCCCHHHHHHHHHcCC-EEEECCHHHHHHHHHHhccCCEEEEEecCCCCCCCccccCCCCCCcCCC--CHHHHhhh----
Confidence 9999999999999998 58999999999999999889999999998754 3455554 89999 88887653
Q ss_pred HHcCC-eEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCC--C----chhHHHHHHHHHhCCCCCcEE
Q 037610 201 EASGL-SVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA--------RTSN--N----KMRKLFKLIFRELLPGSSLKV 265 (405)
Q Consensus 201 ~~~~l-~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~--------~~G~--~----~~~~li~~~l~~~~~~~~~~l 265 (405)
.+ ++.|||||+||++.+.+.|.++++.+.++++.+. +.|+ + +++. +.+.+++.+.+.++++
T Consensus 152 ---~l~~~~Glh~HigSq~~~~~~~~~~~~~~~~~~~~~g~~~~~ldiGGG~~i~y~~~~~~~-~~~~i~~~~~~~~~~l 227 (365)
T 3mt1_A 152 ---VMDRINGFMIHNNCENKDFGLFDRMLGEIEERFGALIARVDWVSLGGGIHFTGDDYPVDA-FSARLRAFSDRYGVQI 227 (365)
T ss_dssp ---TGGGCSEEEECCC--CCSHHHHHHHHHHHHHHHHHHHTTSSEEECCSCCCTTSTTCCHHH-HHHHHHHHHHHHTCEE
T ss_pred ---ccCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEeCCCcCCCCCCCCHHH-HHHHHHHHHHHhCcEE
Confidence 23 6899999999999999999999998888776532 1233 1 1222 2333333222125799
Q ss_pred EECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCC-CCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEEecc
Q 037610 266 ISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGK-FGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGP 344 (405)
Q Consensus 266 ~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~ 344 (405)
++||||+++++|++++++|+++|+. +++|+++|++ ++.+++.+...+.| . +. . ....++++|+||
T Consensus 228 ~~EPGR~lv~~ag~lv~~V~~~k~~--~~~~~~vD~g~~~~~~~~~~~~~~p--~-l~-~--------~~~~~~~~v~Gp 293 (365)
T 3mt1_A 228 YLEPGEASITKSTTLEVTVLDTLYN--GKNLAIVDSSIEAHMLDLLIYRETA--K-VL-P--------NEGSHSYMICGK 293 (365)
T ss_dssp EECCSHHHHTTSEEEEEEEEEEEES--SSEEEEESCCHHHHCHHHHHTTCCC--C-CS-S--------CCSSEEEEEECS
T ss_pred EEeCchHhhccceEEEEEEEEEEEC--CcEEEEEcCccccCChHHhcCCcCc--e-ec-c--------CCCceEEEEEeC
Confidence 9999999999999999999999986 3788888874 33344433222221 1 11 1 124578999999
Q ss_pred CcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCce
Q 037610 345 TCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIP 392 (405)
Q Consensus 345 ~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~ 392 (405)
+|+++|++.++..+|++++||+|+|.++|||+++|+|+||++|+|+++
T Consensus 294 ~C~s~D~l~~~~~~~~l~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v 341 (365)
T 3mt1_A 294 SCLAGDVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIA 341 (365)
T ss_dssp SCCSSCEEEEEEESSCCCTTCEEEESSCCTTSTTSCCCGGGCCCCEEE
T ss_pred CCCccCEEcccccCCCCCCCCEEEEecccchhhhhcccccCCCCCcEE
Confidence 999999999888788999999999999999999999999999999864
No 10
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysin barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A*
Probab=100.00 E-value=5.2e-57 Score=454.19 Aligned_cols=333 Identities=20% Similarity=0.305 Sum_probs=277.1
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCC----CcEEE
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSP----DRIIY 123 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~----~~Ii~ 123 (405)
++| |+|+||+++|++|+++|+ .++ +++|++|||+++.|++.+.+.|+||+|+|.+|++.++++|+++ ++|+|
T Consensus 24 ~~t-P~~vidl~~l~~N~~~l~-~~~--~i~~avKAn~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~~~~~Iv~ 99 (425)
T 1knw_A 24 FGC-PVWVYDAQIIRRQIAALK-QFD--VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVF 99 (425)
T ss_dssp HCS-SEEEEEHHHHHHHHHTTT-TSS--EEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCTTTCTTSEEE
T ss_pred hCC-CEEEEEHHHHHHHHHHHh-hCC--cceEeeecCCCHHHHHHHHHcCCeEEEcCHHHHHHHHHcCCCCCCCcCeEEE
Confidence 679 999999999999999999 887 8999999999999999999999999999999999999999998 89999
Q ss_pred cCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCC--CCCCCCC---CCCCCCCChhhHHHHHH
Q 037610 124 ANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDS--GAKYPLD---SKYGAGHHPQEIMPLLK 198 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~--~~~~~~~---srfGi~~~~~e~~~~~~ 198 (405)
+||+|++++++.|+++|+. ++|||++|++++.+.+++.++.|||+++++. +.++++| +|||+ +.+++.++++
T Consensus 100 ~g~~k~~~~l~~a~~~~i~-~~vds~~el~~l~~~a~~~~v~lRv~~~~~~~~h~~i~tG~~~~RfG~--~~~~~~~~~~ 176 (425)
T 1knw_A 100 TADVIDQATLERVSELQIP-VNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGI--WYTDLPAALD 176 (425)
T ss_dssp EESCCCHHHHHHHHHHTCC-EEESSHHHHHHHHHHSTTCEEEEEEECSCCSSCTTSCCSSSTTCCCSE--EGGGHHHHHH
T ss_pred ECCCCCHHHHHHHHHcCCE-EEECCHHHHHHHHHhhhhccEEEEECCCCCCCCCcccccCCCCCCCcC--CHHHHHHHHH
Confidence 9999999999999999997 8999999999999988888999999998864 4678886 99999 8999999999
Q ss_pred HHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCC--C--------chhHH---H---HHHH
Q 037610 199 AAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA--------RTSN--N--------KMRKL---F---KLIF 254 (405)
Q Consensus 199 ~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~--------~~G~--~--------~~~~l---i---~~~l 254 (405)
.+++.++++.|||+|+||++ +.+.|.++++++.++++.+. +.|+ + ++..+ + ...+
T Consensus 177 ~~~~~~l~l~Gl~~H~gs~~-~~~~~~~~~~~~~~~~~~~G~~~~~ln~GGG~~~~y~~~~~~~d~~~~~~~~~~~~~~i 255 (425)
T 1knw_A 177 VIQRHHLQLVGIHMHIGSGV-DYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQI 255 (425)
T ss_dssp HHHHTTCEEEEEECCCCCTT-CHHHHHHHHHHHHHHHHHHTCCCSEEECCCCCCCCCSTTCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHhCCCCcEEEeCCCcccCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 88777999999999999998 88899999988877776552 1122 1 11111 1 2233
Q ss_pred HHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCC-CChhhhhhccccccccCCCCCCCCccCCC
Q 037610 255 RELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFG-SLAWVTCDEAIAKCTPLPFASSFTTSKGL 333 (405)
Q Consensus 255 ~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (405)
...++ .++++++||||+++++|++++|+|+++|+.++ ++|+++|++|. .+++.+|+.+++. .++...+... ..
T Consensus 256 ~~~~~-~~~~~~~EpGr~~v~~ag~l~t~V~~vk~~~~-~~~~~vd~G~~d~~~~~l~~~~~~~-~~~~~~~~~~---~~ 329 (425)
T 1knw_A 256 ARHLG-HPVKLEIEPGRFLVAQSGVLITQVRSVKQMGS-RHFVLVDAGFNDLMRPAMYGSYHHI-SALAADGRSL---EH 329 (425)
T ss_dssp HHHHT-SCCEEEECCSHHHHGGGEEEEEEEEEEEEETT-EEEEEESCCTTTSCHHHHHCCCCCE-EEECTTCCCC---TT
T ss_pred HHHhC-CCCEEEEcCChHHhhhceEEEEEEEEEEecCC-cEEEEECCchhhccchhhhccccee-EecCCCCCcc---cc
Confidence 33333 46899999999999999999999999998753 67877776554 5577888876532 2332111100 00
Q ss_pred CceeeEEEeccCcCCCCeeecC-------CCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceEE
Q 037610 334 TRTYNSTVFGPTCDAFDEVFTG-------HKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPTY 394 (405)
Q Consensus 334 ~~~~~~~v~G~~C~~~D~l~~~-------~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~~ 394 (405)
...++++|+|++||++|+++.+ +.+|++++||+|+|.++|||+++|+++||++++|+++++
T Consensus 330 ~~~~~~~v~G~~C~s~D~~~~d~~~~~~~~~lp~~~~GD~l~~~~~GAY~~~~~s~fn~~~~p~~v~~ 397 (425)
T 1knw_A 330 APTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLF 397 (425)
T ss_dssp CCEEEEEEECSSSSTTCBSSBCTTSCBCCEEEECCCTTCEEEEESCSSSSGGGCCCTTTCCCCCEEEE
T ss_pred CCceeEEEECCCCCCCCEEeecCCCCccceeCCCCCCCCEEEEeCCCcchHHHHhHhhCCCCCeEEEE
Confidence 1236899999999999999999 788999999999999999999999999999999987543
No 11
>3n29_A Carboxynorspermidine decarboxylase; lyase; HET: PLP; 1.90A {Campylobacter jejuni subsp}
Probab=100.00 E-value=7.1e-59 Score=465.08 Aligned_cols=323 Identities=16% Similarity=0.144 Sum_probs=255.4
Q ss_pred CCCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEE
Q 037610 46 QEFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 46 ~~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~ 123 (405)
.+++| |+||||+++|++|+++|++.++ +++++||+|||+++.|++++.+.|+||||+|.+|++.++++ + +++|+|
T Consensus 40 ~~~~T-P~yv~d~~~l~~n~~~l~~~~~~~~~~i~yAvKAN~~~~vl~~l~~~G~G~dvaS~~El~~a~~~-~-~~~Ii~ 116 (418)
T 3n29_A 40 EKIQT-PAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEY-M-DKEIHT 116 (418)
T ss_dssp TTCCS-SEEEEEHHHHHHHHHHHHHHHHHHCCEEEEETTTCCCGGGHHHHHHHSCEEEESSHHHHHHHHHH-T-CSEEEE
T ss_pred hhCCC-CEEEEeHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCHHHHHHHHHcCCeEEECCHHHHHHHHhh-C-CCCEEE
Confidence 37899 9999999999999999999996 89999999999999999999999999999999999999997 7 578999
Q ss_pred cCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCC--CCCCCCC---CCCCCCCChhhHHHHHH
Q 037610 124 ANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDS--GAKYPLD---SKYGAGHHPQEIMPLLK 198 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~--~~~~~~~---srfGi~~~~~e~~~~~~ 198 (405)
.||+|++++|++|+++|+ .++|||++||++|.+.+++.+++|||||+++. +.+++++ +|||+ +.+++.+.
T Consensus 117 ~~~~k~~~el~~A~~~g~-~i~vds~~EL~~l~~~a~~~~v~lRvnp~~~~~~~~~i~tg~~~sKFGi--~~~~~~~~-- 191 (418)
T 3n29_A 117 YSPAFKEDEIGEIASLSH-HIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGI--RAKDFENV-- 191 (418)
T ss_dssp EESSCCHHHHHHHHHHCS-EEEESSHHHHHHHGGGCTTSEEEEEBCCCCC----------CTTCCSSB--CGGGGTTC--
T ss_pred ECCCCCHHHHHHHHHcCC-eEEECCHHHHHHHHHhcCCCCEEEEEeCCCCCCCCcccccCCCCCcCcC--CHHHHHHh--
Confidence 999999999999999998 58999999999999999999999999998864 2344443 99999 88887552
Q ss_pred HHHHcCC-eEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCC------CchhHHHHHHHHHhCCCCCc
Q 037610 199 AAEASGL-SVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA--------RTSN------NKMRKLFKLIFRELLPGSSL 263 (405)
Q Consensus 199 ~~~~~~l-~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~--------~~G~------~~~~~li~~~l~~~~~~~~~ 263 (405)
.+ ++.|||||+||+ .+.+.|.++++.+.++++.+. +.|+ ++++. +.+.+.+.+.+.++
T Consensus 192 -----~l~~l~Glh~HigSq-~~~~~~~~~~~~~~~~~~~~g~~l~~ldiGGGf~i~y~~~~~~~-~~~~i~~~~~~~~~ 264 (418)
T 3n29_A 192 -----DLNAIEGLHFHALCE-ESADALEAVLKVFEEKFGKWIGQMKWVNFGGGHHITKKGYDVEK-LIALCKNFSDKYGV 264 (418)
T ss_dssp -----CCTTCCEEECCCCSS-BCHHHHHHHHHHHHHHHGGGTTTCSEEECCSCBCTTSTTCCHHH-HHHHHHHHHHHHTC
T ss_pred -----hcCceEEEEEecCCC-CCHHHHHHHHHHHHHHHHHhCCCCCEEEeCCCcCCCCCCCCHHH-HHHHHHHHHHHcCC
Confidence 34 789999999999 789999988888777654211 1132 11222 23333332221257
Q ss_pred EEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCC-CCCCh--------hhhhhcccc---ccccCCCCCCCCccC
Q 037610 264 KVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGK-FGSLA--------WVTCDEAIA---KCTPLPFASSFTTSK 331 (405)
Q Consensus 264 ~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~-~~~~~--------~~~~~~~~~---~~~~l~~~~~~~~~~ 331 (405)
+|++||||+++++|++|+++|+++|.. +++|+++|++ +++++ |.+|+.+++ ...++...
T Consensus 265 ~ii~EPGR~lva~ag~lv~~V~~~K~~--~~~~~~vD~g~~~~m~d~~~~~~rp~l~~a~~~~~h~~~~~~~~------- 335 (418)
T 3n29_A 265 QVYLEPGEAVGWQTGNLVASVVDIIEN--EKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDL------- 335 (418)
T ss_dssp EEEECCSHHHHTTSEEEEEEEEEEEES--SSEEEEESSCHHHHSHHHHHTTCCCCBTTEEEEECTTCCBCCCC-------
T ss_pred EEEEeCCHHhhhhcEEEEEEEEEEEeC--CCEEEEECCcccccchhhhccCcCceeeccccccccccccccCC-------
Confidence 999999999999999999999999986 3778888764 33343 333333211 00111110
Q ss_pred CCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceE
Q 037610 332 GLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPT 393 (405)
Q Consensus 332 ~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~ 393 (405)
....++++|+||+|+++|++..+..+|++++||+|+|.++|||+++|+|+||++|+|++++
T Consensus 336 -~~~~~~~~v~Gp~C~s~D~l~~~~~~~~l~~GD~l~~~~~GAY~~s~ss~fN~~~~p~~v~ 396 (418)
T 3n29_A 336 -KENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLML 396 (418)
T ss_dssp -CTTCEEEEEECSSSCTTCEEEEEEESSCCCTTCEEEESSCSSSSGGGCCCGGGCCCCEEEE
T ss_pred -CCCceEEEEEcCCCCCCCEEeecccCCCCCCCCEEEEeCccchhHHHhccccCCCCCCEEE
Confidence 2345789999999999999998777778999999999999999999999999999998643
No 12
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=100.00 E-value=2e-57 Score=458.02 Aligned_cols=335 Identities=20% Similarity=0.247 Sum_probs=272.3
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+++| |+|+||+++|++|+++|++.++ +++++|++|||+++.|++.+.++|+||+|+|.+|++.++++|+++++|+|.|
T Consensus 14 ~~~t-P~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~I~~~g 92 (428)
T 2j66_A 14 RFET-PFYLYDGDFIEAHYRQLRSRTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGELALARHAGFSAENIIFSG 92 (428)
T ss_dssp HSCS-SEEEEEHHHHHHHHHHHHHTSCTTEEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEECC
T ss_pred hhCC-CEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeeeCCCHHHHHHHHHcCCeEEEeCHHHHHHHHHcCCCcCeEEEeC
Confidence 4789 9999999999999999999998 8999999999999999999999999999999999999999999988899999
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCC-CCCCCC---CCCCCCCCChhhHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDS-GAKYPL---DSKYGAGHHPQEIMPLL 197 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~-~~~~~~---~srfGi~~~~~e~~~~~ 197 (405)
|.|++++++.|+++|+..++|||++|+++|.+. .+..+++||||++++. +..+.+ .+|||+ +.+++.+++
T Consensus 93 ~~k~~~~i~~a~~~~v~~~~vds~~el~~l~~~a~~~~~~~~V~lrvn~g~~~~~~~~~~~~~~srfG~--~~~e~~~~~ 170 (428)
T 2j66_A 93 PGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTARVAIRINPDKSFGSTAIKMGGVPRQFGM--DESMLDAVM 170 (428)
T ss_dssp SCCCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSSCC--CCCSSSCCCCSSSE--EGGGHHHHH
T ss_pred CCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhhCCCceEEEEEcCCCCCCCCccccCCCCCCCCC--CHHHHHHHH
Confidence 999999999999999855899999999999875 3567999999998764 223333 389999 899999999
Q ss_pred HHHHHc-CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH-hC-----------CC--C--------chhHH---HH
Q 037610 198 KAAEAS-GLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA-RT-----------SN--N--------KMRKL---FK 251 (405)
Q Consensus 198 ~~~~~~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~-~~-----------G~--~--------~~~~l---i~ 251 (405)
+.+++. ++++.|||+|+||+..+.+.+.++++++.++++.++ +. |+ + +++.+ ++
T Consensus 171 ~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~l~~GGG~~i~y~~~~~~~~~~~~~~~i~ 250 (428)
T 2j66_A 171 DAVRSLQFTKFIGIHVYTGTQNLNTDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVS 250 (428)
T ss_dssp HHHHHCTTEEEEEEECCCCSCBCCHHHHHHHHHHHHHHHHHHHHHHCCCCSEEECCCCBCCCCC--CCCCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEeCCCcCcCCCCCCCCCCHHHHHHHHH
Confidence 988775 899999999999998888888888998888887763 22 21 0 01111 44
Q ss_pred HHHHHhC--CCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCCCC-hhhh----hhccccccccCC--
Q 037610 252 LIFRELL--PGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFGSL-AWVT----CDEAIAKCTPLP-- 322 (405)
Q Consensus 252 ~~l~~~~--~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~~~-~~~~----~~~~~~~~~~l~-- 322 (405)
..+..++ +.+.+++++||||++++++++++|+|+++|+.+ +++|+++|+++..+ .+.+ |+..++. ..+.
T Consensus 251 ~~~~~~~~~~~~~~~l~~EpGr~~~~~ag~l~t~V~~vK~~~-g~~~~~~d~g~~~~~~~~~~~~~y~~~~~~-~~~~~~ 328 (428)
T 2j66_A 251 DYVQEARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASK-GEVFVIVDGGMHHHAASTFRGRSMRSNYPM-EYIPVR 328 (428)
T ss_dssp HHHHHHHTTTCTTCEEEEEESHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCTTC-----------CE-EEEC--
T ss_pred HHHHHHHhccCCCcEEEEecCHHHHhhceEEEEEEEEEEecC-CcEEEEECCccccchhhhccchhccCcCcE-Eeeccc
Confidence 4555443 235789999999999999999999999999874 37888888876644 4566 6665532 2221
Q ss_pred CCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCC-CCCCCCCCCce
Q 037610 323 FASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGT-NFNGYSTVAIP 392 (405)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~-~fn~~~~p~~~ 392 (405)
+... ....++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|++ +||++++|+++
T Consensus 329 ~~~~------~~~~~~~~i~G~~C~s~D~l~~d~~lp~~~~GD~l~~~~~GAY~~~~~s~~fn~~~~p~~v 393 (428)
T 2j66_A 329 EDSG------RRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGAYGLSFSPVHFLGHPTPIEI 393 (428)
T ss_dssp -------------CEEEEEECSSSSTTCEEEEEEEESCCCTTCEEEESSCSSSSGGGSCTTGGGCCCCEEE
T ss_pred CCCC------CCCCceEEEEcCCCCCCcEEEecccCCCCCCCCEEEEeCCCcchHHhhhhhhhCCCCCeEE
Confidence 2111 2245789999999999999999999999999999999999999999986 99999999853
No 13
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, STRU genomics, TB structural genomics consortium, TBSGC; HET: LLP; 2.33A {Mycobacterium tuberculosis} PDB: 1hkv_A* 1hkw_A
Probab=100.00 E-value=1.5e-57 Score=463.30 Aligned_cols=346 Identities=19% Similarity=0.255 Sum_probs=285.1
Q ss_pred cCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhC-CCCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHH
Q 037610 30 TKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNL-PMIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEI 108 (405)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~-~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~ 108 (405)
.+.++.+++++ ++| |+|+||+++|++|+++|++.+ ++++++|++|||+++.|++.+.+.|+||+|+|.+|+
T Consensus 29 ~~~~l~~l~~~-------~~t-P~~vid~~~l~~n~~~l~~~~~~~~~i~~avKan~~~~v~~~l~~~G~g~~vas~~E~ 100 (467)
T 2o0t_A 29 AGIPLTQLAQE-------YGT-PLFVIDEDDFRSRCRETAAAFGSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGEL 100 (467)
T ss_dssp TTEEHHHHHHH-------HCS-SEEEEEHHHHHHHHHHHHHHTSSGGGBEEEGGGCCCHHHHHHHHHHTCEEEECSHHHH
T ss_pred CCccHHHHHhh-------cCC-CEEEEeHHHHHHHHHHHHHhcCCCcEEEEEeccCCCHHHHHHHHHcCCeEEEeCHHHH
Confidence 56777777554 468 999999999999999999999 589999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHC----CCCeEEEEEecCCCC--CCCC---C
Q 037610 109 EAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWH----PKSDLLIRIKSPDDS--GAKY---P 179 (405)
Q Consensus 109 ~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~----~~~~v~lRi~~~~~~--~~~~---~ 179 (405)
+.++++|+++.+|+|.||.|++++++.|+++|+..++|||++|+++|.+.+ +..+++||||++.+. +..+ .
T Consensus 101 ~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~gv~~i~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~~~~~ 180 (467)
T 2o0t_A 101 AVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAH 180 (467)
T ss_dssp HHHHHTTCCGGGEEECCTTCCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESS
T ss_pred HHHHHcCCCcccEEEeCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhhCCCCeEEEEEcCCCCCCCCcccccCC
Confidence 999999999889999999999999999999999568999999999998753 467999999997543 1122 2
Q ss_pred CCCCCCCCCCh--hhHHHHHHHHHH-cCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH-hC--------------
Q 037610 180 LDSKYGAGHHP--QEIMPLLKAAEA-SGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA-RT-------------- 241 (405)
Q Consensus 180 ~~srfGi~~~~--~e~~~~~~~~~~-~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~-~~-------------- 241 (405)
..+|||+ +. +++.++++.+++ +++++.|||+|+||++.+.+.+.++++++.++++.++ +.
T Consensus 181 ~~srfG~--~~~~~e~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~~~~~~ln~G 258 (467)
T 2o0t_A 181 EDQKFGL--SVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLG 258 (467)
T ss_dssp CCSSSSE--ETTTTHHHHHHHHHHHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECC
T ss_pred CCCCcCC--cCCHHHHHHHHHHHHhCCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCEEEeC
Confidence 2489999 65 688899988876 4899999999999998888889889988888876653 21
Q ss_pred -CC--C--------chhHH---HHHHHHHhCC---CCCcEEEECCchhhhccceeEEEEEEEEEEe----CCeeEEEEec
Q 037610 242 -SN--N--------KMRKL---FKLIFRELLP---GSSLKVISEPGRFFAASAFTLYAQIIGKRVR----GELREYWIND 300 (405)
Q Consensus 242 -G~--~--------~~~~l---i~~~l~~~~~---~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~----~~~~~~~i~d 300 (405)
|+ + ++... +...+.++++ .+.+++++||||+++++|++|+|+|+++|+. +.+++|+++|
T Consensus 259 GG~~i~y~~~~~~~~~~~~~~~v~~~i~~~~~~~g~~~~~l~~EpGR~~v~~ag~l~t~V~~vK~~~~g~~~~~~~~~vd 338 (467)
T 2o0t_A 259 GGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVD 338 (467)
T ss_dssp CCBCCCSSTTCCCCCHHHHHHHHHHHHHHHHHHTTCCCCEEEBCCSHHHHSTTEEEEEEEEEEEEEECSSSCEEEEEEES
T ss_pred CCcCcCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCeEEeccchheeccceEEEEEEEEEeecccCCCCccEEEEEc
Confidence 21 1 01111 4445555443 2567999999999999999999999999986 3347888866
Q ss_pred C-CCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCC-CCCCCCEEEEcCCCccccc
Q 037610 301 G-KFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLP-ELEVNDWLVFSEMGAYTTA 378 (405)
Q Consensus 301 g-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp-~l~~GD~l~~~~~GAY~~~ 378 (405)
+ ++..+++.+|+..++ +. +.+... ....++++|+|++||++|+++.++.+| ++++||+|+|.++|||+++
T Consensus 339 ~g~~~~~~p~~y~~~~~-~~-~~~~~~------~~~~~~~~v~G~~C~s~D~~~~d~~lp~~l~~GD~l~~~~~GAY~~~ 410 (467)
T 2o0t_A 339 GGMSDNIRTALYGAQYD-VR-LVSRVS------DAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYS 410 (467)
T ss_dssp CCTTTCCHHHHHCCCCC-EE-ECSSCC------CSCEEEEEEECSSSSTTCEEEEEEEEETTCCTTCEEEESCCSSSSST
T ss_pred CccccccchHHhCCcCc-eE-ecCCCC------CCCceeEEEECCCcCCCCEEEeccccCCCCCCCCEEEEcCCCcchHH
Confidence 4 566888999987663 22 222221 235678999999999999999999999 9999999999999999999
Q ss_pred cCCCCCCCCCCCceE
Q 037610 379 CGTNFNGYSTVAIPT 393 (405)
Q Consensus 379 ~~~~fn~~~~p~~~~ 393 (405)
|+++||++++|+++.
T Consensus 411 ~~s~fn~~~~p~~v~ 425 (467)
T 2o0t_A 411 LSSRYNMVGRPAVVA 425 (467)
T ss_dssp TCBCGGGCCCCEEEE
T ss_pred HhhHhhCCCCCcEEE
Confidence 999999999998643
No 14
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=100.00 E-value=1.9e-56 Score=450.37 Aligned_cols=348 Identities=24% Similarity=0.327 Sum_probs=283.2
Q ss_pred EeecCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCeEEEcC
Q 037610 27 TVVTKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGSNFDCGS 104 (405)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS 104 (405)
.+..+..+.++++ +++| |+|+||+++|++|+++|++.++ +++++|++|||+++.|++.+.++|+||+|+|
T Consensus 17 ~~~~~~~~~~l~~-------~~~t-P~~vidl~~i~~N~~~l~~~~~~~~~~l~~avKan~~~~v~~~l~~~G~g~~vas 88 (425)
T 2qgh_A 17 RGSHMFNYEELFQ-------THKT-PFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVS 88 (425)
T ss_dssp ------CHHHHHH-------HCCS-SEEEEEHHHHHHHHHHHHHTTCSSCEEEEEEGGGCCCHHHHHHHHHTTCEEEESS
T ss_pred eccccccHHHHHH-------hhCC-CEEEEEHHHHHHHHHHHHHhcCcCCCEEEEEeccCCCHHHHHHHHHcCCeEEEeC
Confidence 3445566655533 3689 9999999999999999999998 5699999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCC--CCCC
Q 037610 105 RSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDS--GAKY 178 (405)
Q Consensus 105 ~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~--~~~~ 178 (405)
.+|++.++++|+++++|+|+||.|++++++.|+++|+..++|||++|+++|.+. .+..+++||||++.+. +..+
T Consensus 89 ~~E~~~~~~~G~~~~~i~~~g~~k~~~~i~~a~~~gv~~i~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~~~~ 168 (425)
T 2qgh_A 89 IGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKARISIRINPNIDAKTHPYI 168 (425)
T ss_dssp HHHHHHHHHTTCCGGGEEECCTTCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCCCSCGGG
T ss_pred HHHHHHHHHcCCChhHEEEcCCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHHHHhcCCCceEEEEEeCCCCCCCCccc
Confidence 999999999999999999999999999999999999966899999999999874 4568999999998754 3345
Q ss_pred CCC---CCCCCCCChhhHHHHHHHHHHc-CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhHH-----
Q 037610 179 PLD---SKYGAGHHPQEIMPLLKAAEAS-GLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSNNKMRKL----- 249 (405)
Q Consensus 179 ~~~---srfGi~~~~~e~~~~~~~~~~~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l----- 249 (405)
.++ +|||+ +++++.++++.+++. ++++.|||+|+||+..+.+.+.++++++.++++.+++.|+ +++++
T Consensus 169 ~tg~~~sRfG~--~~~e~~~l~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~l~~GGG 245 (425)
T 2qgh_A 169 STGLKENKFGV--GEKEALEMFLWAKKSAFLEPVSVHFHIGSQLLDLEPIIEASQKVAKIAKSLIALGI-DLRFFDVGGG 245 (425)
T ss_dssp BCCSTTSSSSB--CHHHHHHHHHHHHHCSSEEEEEEECCCBSSBCCHHHHHHHHHHHHHHHHHHHHTTC-CCCEEECCCC
T ss_pred ccCCCCCCCcC--CHHHHHHHHHHHHhCCCccEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCCEEEECCC
Confidence 554 99999 999999999988774 8999999999999988888899999999999888764432 11111
Q ss_pred ---------------HHHHHHHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCCC-Chhhhhhc
Q 037610 250 ---------------FKLIFRELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFGS-LAWVTCDE 313 (405)
Q Consensus 250 ---------------i~~~l~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~~-~~~~~~~~ 313 (405)
+.+.++..+...++++++||||++++++++++|+|+++|+.++ ++|+++|++|.. +++.+|+.
T Consensus 246 ~~i~y~~~~~~~~~~~~~~v~~~i~~~~~~~~~EpGr~~~~~a~~l~t~V~~vk~~~~-~~~~~vd~G~~d~~~~~l~~~ 324 (425)
T 2qgh_A 246 IGVSYENEETIKLYDYAQGILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQN-KRFVIVDAGMNDFLRPSLYHA 324 (425)
T ss_dssp BCCCTTSCCCCCHHHHHHHHHHHTTTCCCEEEECCCHHHHTTTEEEEEEEEEEEC--C-CCEEEESCCTTTCCHHHHHCC
T ss_pred cCcCCCCCCCCCHHHHHHHHHHHHhhcCCEEEEcCchhhhhcceEEEEEEEEEEecCC-CEEEEEcCchhcccchhhcCC
Confidence 2334444444346889999999999999999999999998643 678888877664 46778876
Q ss_pred cccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceE
Q 037610 314 AIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPT 393 (405)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~ 393 (405)
+++. .++ .... ....++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|++++
T Consensus 325 ~~~~-~~~-~~~~------~~~~~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~v~ 396 (425)
T 2qgh_A 325 KHAI-RVI-TPSK------GREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLELA 396 (425)
T ss_dssp CCCE-EEC-SCC---------CCEEEEEECSSSSTTCEEEEEEEECCCCTTCEEEECSCSSSSGGGCCCTTTCCCCEEEE
T ss_pred ccee-eec-cCCC------CCcceEEEEECCCcCCCcEecccccCCCCCCCCEEEEeCCCCchhhhhccccCCCCCeEEE
Confidence 6531 223 1101 1125789999999999999999999999999999999999999999999999999998654
Q ss_pred E
Q 037610 394 Y 394 (405)
Q Consensus 394 ~ 394 (405)
+
T Consensus 397 ~ 397 (425)
T 2qgh_A 397 L 397 (425)
T ss_dssp E
T ss_pred E
Confidence 3
No 15
>2yxx_A Diaminopimelate decarboxylase; TM1517, TIM beta/alpha barrel fold, lyase, structural genomi NPPSFA; HET: PLP; 1.70A {Thermotoga maritima}
Probab=100.00 E-value=2.6e-56 Score=444.11 Aligned_cols=330 Identities=20% Similarity=0.282 Sum_probs=274.4
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEc
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+++| |+|+||+++|++|+++|++.++ +++++|++|||+++.|++.+.+.|+||+|+|.+|++.++++|+++++|++.
T Consensus 10 ~~~t-P~~vidl~~l~~N~~~l~~~~~~~~~~i~~avKAn~~~~v~~~l~~~G~g~~vas~~E~~~~~~~G~~~~~Il~~ 88 (386)
T 2yxx_A 10 IHGT-PTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGELLAAKLAGVPSHTVVWN 88 (386)
T ss_dssp HHCS-SEEEEEHHHHHHHHHHHHHHTTTSCEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGEEEC
T ss_pred hcCC-CEEEEEHHHHHHHHHHHHHhhccCCceEEEEEeeCCCHHHHHHHHHcCCeEEEcCHHHHHHHHHcCCChhhEEEe
Confidence 3679 9999999999999999999998 469999999999999999999999999999999999999999999889999
Q ss_pred CCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCC-CeEEEEEecCCCC--CCCCCCC---CCCCCCCChhhHHHHHH
Q 037610 125 NPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPK-SDLLIRIKSPDDS--GAKYPLD---SKYGAGHHPQEIMPLLK 198 (405)
Q Consensus 125 gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~-~~v~lRi~~~~~~--~~~~~~~---srfGi~~~~~e~~~~~~ 198 (405)
||.|++++++.|+++|+..++|||.+|+++|.+.+++ .++.|||+++.+. |.++++| +|||+ +.++ .++++
T Consensus 89 ~~~k~~~~l~~a~~~~v~~~~vds~~el~~l~~~a~~~~~v~lrv~~~~~~~~h~~i~tG~~~~RfG~--~~~~-~~~~~ 165 (386)
T 2yxx_A 89 GNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGI--PLED-LDSFM 165 (386)
T ss_dssp CSCCCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCTTCEEEEEEECCCCTTTSHHHHHHHHHSSSSE--EGGG-HHHHH
T ss_pred CCCCCHHHHHHHHHCCCCEEEeCCHHHHHHHHHhcCcCCeEEEEECCCCCCCCCcccccCCCCCCCCC--ChhH-HHHHh
Confidence 9999999999999999845899999999999998884 8999999998764 3345665 89999 8888 88888
Q ss_pred HHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH-----H-hCCCCchhH--------HHHHHHHHhCCCCCcE
Q 037610 199 AAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTA-----A-RTSNNKMRK--------LFKLIFRELLPGSSLK 264 (405)
Q Consensus 199 ~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~-----~-~~G~~~~~~--------li~~~l~~~~~~~~~~ 264 (405)
.+.+++++.|||+|+||++.+.+.+.++++++.++++.+ . +.|+ ...+ .....++..+...+ +
T Consensus 166 -~~~~~l~~~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~~~n~GGG~-~~~~~~~~~~~~~~~~~vr~~i~~y~-~ 242 (386)
T 2yxx_A 166 -ERFRSMNIRGLHVHIGSQITRVEPFVEAFSKVVRASERYGFEEINIGGGW-GINYSGEELDLSSYREKVVPDLKRFK-R 242 (386)
T ss_dssp -HHHTTSCEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHTCSEEECCCCB-CCCSSSCCCCHHHHHHHTGGGGTTCS-E
T ss_pred -hccCCCcEEEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCCEEEECCCc-CcCCCCCCCCHHHHHHHHHHHHHhCC-e
Confidence 666799999999999999877788888999998888777 2 2232 2111 02222322222112 8
Q ss_pred EEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCCCC-hhhhhhccccccccCCCCCCCCccCCCCceeeEEEec
Q 037610 265 VISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFGSL-AWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFG 343 (405)
Q Consensus 265 l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G 343 (405)
+++||||++++++++++|+|+++|+.. +++|+++|++|... .+.+|+.+++. .++. . . . ++++++|+|
T Consensus 243 ~~~epGr~~~~~a~~l~t~V~~vk~~~-g~~~~~vd~G~~d~~~~~l~~~~~~~-~~i~-~-~------~-~~~~~~i~G 311 (386)
T 2yxx_A 243 VIVEIGRYIVAPSGYLLLRVVLVKRRH-NKAFVVVDGGMNVLIRPALYSAYHRI-FVLG-K-Q------G-KEMRADVVG 311 (386)
T ss_dssp EEEEECHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCCHHHHTCCCCCE-EETT-C-C------C-CSEEEEEEC
T ss_pred EEecCcceeeccccEEEEEEEEEEecC-CcEEEEEeCccccccchHHhcccCce-Eecc-C-C------C-CceEEEEEc
Confidence 889999999999999999999999874 37888888877654 45677665421 1222 1 1 1 267899999
Q ss_pred cCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceEE
Q 037610 344 PTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPTY 394 (405)
Q Consensus 344 ~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~~ 394 (405)
++||++|+++.++.+|++++||+|+|.++|||+++|+++||++++|+++.+
T Consensus 312 ~~C~~~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~fn~~~~p~~~~~ 362 (386)
T 2yxx_A 312 PLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLV 362 (386)
T ss_dssp SSSSTTCEEEEEEEESCCCTTCEEEESSCSSSSGGGCCCTTTCCCCEEEEE
T ss_pred CCCCCCCEEeeccccCCCCCCCEEEEeCCCCchHHHhhhhhCCCCCcEEEE
Confidence 999999999999999999999999999999999999999999999986544
No 16
>1twi_A Diaminopimelate decarboxylase; antibiotic resistance, lysine biosynthesis, structural genomics, NYSGXRC, PSI; HET: LYS PLP; 2.00A {Methanocaldococcus jannaschii} SCOP: b.49.2.3 c.1.6.1 PDB: 1tuf_A*
Probab=100.00 E-value=8.5e-56 Score=446.92 Aligned_cols=348 Identities=21% Similarity=0.270 Sum_probs=288.2
Q ss_pred cCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCC--------CCceeeeeccCCcHHHHHHHHHcCCeEE
Q 037610 30 TKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLP--------MIHPHYAVKCNPEPALLEALAALGSNFD 101 (405)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~--------~~~i~yavKaN~~~~vl~~l~~~G~g~~ 101 (405)
.+.++.+++++ ++| |+|+||+++|++|+++|++.++ +++++|++|||+++.|++.+.++|+||+
T Consensus 17 ~~~~~~~l~~~-------~~t-P~~vidl~~l~~n~~~l~~~~~~a~~~~~~~~~~~~avKan~~~~v~~~l~~~G~g~~ 88 (434)
T 1twi_A 17 DGYDAIELAEK-------FGT-PLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 88 (434)
T ss_dssp TTEEHHHHHHH-------HCS-SEEEEEHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCCCHHHHHHHHHTTCEEE
T ss_pred CCccHHHHHHh-------hCC-CEEEEEHHHHHHHHHHHHHhhhhhhcccCCCeEEEEEEccCCCHHHHHHHHHcCCcEE
Confidence 56777777655 468 9999999999999999999887 7899999999999999999999999999
Q ss_pred EcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCC--
Q 037610 102 CGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSG-- 175 (405)
Q Consensus 102 vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~-- 175 (405)
|+|.+|++.++++|+++.+|+|.||.|++++++.|+++|+..++|||++|+++|.+. .+..+++||||++.+.+
T Consensus 89 vas~~E~~~~~~~G~~~~~I~~~g~~k~~~~i~~a~~~~i~~~~vds~~el~~l~~~a~~~~~~~~v~lrvn~g~~~~~~ 168 (434)
T 1twi_A 89 VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTH 168 (434)
T ss_dssp ECSHHHHHHHHHTTCCGGGEEECCSSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTC
T ss_pred EeCHHHHHHHHHCCCCCCcEEEECCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCCCCC
Confidence 999999999999999888899999999999999999999855899999999999864 45689999999987542
Q ss_pred CCCCCC---CCCCCCCChhh--HHHHHHHHHHc-CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC------
Q 037610 176 AKYPLD---SKYGAGHHPQE--IMPLLKAAEAS-GLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN------ 243 (405)
Q Consensus 176 ~~~~~~---srfGi~~~~~e--~~~~~~~~~~~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~------ 243 (405)
..++++ +|||+ +.++ +.++++.+++. ++++.|||+|+||+..+.+.+.++++++.++++.+++.|+
T Consensus 169 ~~~~tG~~~~rfG~--~~~~~~~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~l~ 246 (434)
T 1twi_A 169 PKISTGLKKNKFGL--DVESGIAMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVN 246 (434)
T ss_dssp HHHHHHHHHSSCSE--ESTTSHHHHHHHHHHHCSSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred cccccCCCCCCccC--ChhhhHHHHHHHHHHhCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 223443 89999 8888 99999988774 8999999999999987888888899999888887764332
Q ss_pred -------C--------chhHH---HHHHHHHhCCCCC-cEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCC
Q 037610 244 -------N--------KMRKL---FKLIFRELLPGSS-LKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFG 304 (405)
Q Consensus 244 -------~--------~~~~l---i~~~l~~~~~~~~-~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~ 304 (405)
+ ++..+ ++..+..+++..+ +++++||||++++++++++|+|+++|..+ +++|+++|++|.
T Consensus 247 ~GGg~~~~y~~~~~~~~~~~~~~~i~~~i~~~~~~~g~~~~~~EpGr~~~~~a~~l~~~V~~vk~~~-g~~~~~vd~G~~ 325 (434)
T 1twi_A 247 LGGGLGIPYYKDKQIPTQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETP-VTKWVMIDAGMN 325 (434)
T ss_dssp CCCCBCCCSSSSSCCCCHHHHHHHHHHHHHTTTTTSCCCEEEECCSHHHHGGGEEEEEEEEEEEECS-SCEEEEESCCTT
T ss_pred ECCCcCcCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCeEEEEccChHhhhhceEEEEEEEEEEecC-CcEEEEEcCchh
Confidence 0 11111 3455666665446 89999999999999999999999999864 368888888776
Q ss_pred C-ChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCC
Q 037610 305 S-LAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNF 383 (405)
Q Consensus 305 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~f 383 (405)
. +.+.+|+.+++. .++.. . ... ++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+++|
T Consensus 326 d~~~~~l~~~~~~~-~~~~~--~------~~~-~~~~i~G~~C~s~D~~~~d~~lp~~~~GD~v~~~~~GAY~~~~~s~f 395 (434)
T 1twi_A 326 DMMRPAMYEAYHHI-INCKV--K------NEK-EVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNY 395 (434)
T ss_dssp TCCHHHHHCCCCCE-EESBC--C------SCE-EEEEEECSSSCTTCEEEEEEEEECCCTTCEEEEECCSSSSGGGCBCT
T ss_pred cccchHHhccccee-EecCC--C------CCC-ceEEEECCCCCCCCEEeeccCCCCCCCCCEEEEeCCCcchHhhhhhh
Confidence 5 466788765531 12211 1 113 78999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEEEeCC
Q 037610 384 NGYSTVAIPTYVVRSN 399 (405)
Q Consensus 384 n~~~~p~~~~~~~~s~ 399 (405)
|++++|+++. +....
T Consensus 396 n~~~~p~~v~-~~~~~ 410 (434)
T 1twi_A 396 NARGRPRMVL-TSKKG 410 (434)
T ss_dssp TTCCCCEEEE-EETTE
T ss_pred hCCCCCeEEE-EECCc
Confidence 9999998644 43333
No 17
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for struct genomics, riken spring-8 center; 1.99A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-53 Score=429.74 Aligned_cols=343 Identities=22% Similarity=0.347 Sum_probs=274.4
Q ss_pred cCCcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHH
Q 037610 30 TKDELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIE 109 (405)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~ 109 (405)
.+..+.+++++ ++| |+|++|+++|++|+++|++.+++++++|++|||+++.|++.+.+.|++|+|+|.+|+.
T Consensus 21 ~~~~~~~l~~~-------~~t-P~~vidl~~l~~N~~~l~~~~~~~~l~~vvKan~~~~v~~~l~~~G~~~~vas~~E~~ 92 (420)
T 2p3e_A 21 EGVSLKELAQT-------FGT-PLYVYSSNFIKERFEAYRKAFPDALICYAVKANFNPHLVKLLGELGAGADIVSGGELY 92 (420)
T ss_dssp TTEEHHHHHHH-------HCS-SEEEEEHHHHHHHHHHHHHHSTTSEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHH
T ss_pred CCccHHHHHHh-------hCC-CEEEEEHHHHHHHHHHHHHhCCcCeEEEEEecCCCHHHHHHHHHcCCeEEEeCHHHHH
Confidence 45666676554 468 9999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCC--CCCCCCC--
Q 037610 110 AVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDS--GAKYPLD-- 181 (405)
Q Consensus 110 ~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~--~~~~~~~-- 181 (405)
.++++|+++++|+|.||.|++++++.|+++|+..++|||++|+++|.+. .+..+++||||++.+. +.++++|
T Consensus 93 ~~~~~G~~~~~Il~~g~~~~~~~l~~a~~~~i~~~~vds~~~l~~l~~~a~~~~~~~~v~lRvn~~~~~~~~~~idtG~~ 172 (420)
T 2p3e_A 93 LAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQ 172 (420)
T ss_dssp HHHHTTCCGGGEEECSSCCCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEEC---------------
T ss_pred HHHHcCCChhHEEEeCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHHHHHhcCCCCcEEEEECCCCCCCCCcccccCCC
Confidence 9999999988899999999999999999999855899999999999864 4568999999998764 3567765
Q ss_pred -CCCCCCCChhhHHHHHHHHHHc-CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhHH----------
Q 037610 182 -SKYGAGHHPQEIMPLLKAAEAS-GLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSNNKMRKL---------- 249 (405)
Q Consensus 182 -srfGi~~~~~e~~~~~~~~~~~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l---------- 249 (405)
+|||+ +++++.++++.+++. ++++.|||+|+||+..+.+.+.++++++.++++.+++.|+ +++++
T Consensus 173 ~~R~G~--~~~e~~~~~~~~~~~~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~l~~Ggg~~~~~ 249 (420)
T 2p3e_A 173 KSKFGV--DIREAQKEYEYASKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGF-DIKYLDIGGGLGIKY 249 (420)
T ss_dssp -CCSCE--EGGGHHHHHHHHHTCTTEEEEEEECCCCSSBSSCTHHHHHHHHHHHHHHHHHHTTC-CCCEEECCCCBCCCC
T ss_pred CCCCCC--CHHHHHHHHHHHHhCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCCEEEECCCcCcCC
Confidence 89999 899999999988774 8999999999999876666788899999998888775443 22211
Q ss_pred -----------HHHHHHHhCCCCCcEEEECCchhhhccceeEEEEEEEEEEeCCeeEEEEecCCCCC-Chhhhhhccccc
Q 037610 250 -----------FKLIFRELLPGSSLKVISEPGRFFAASAFTLYAQIIGKRVRGELREYWINDGKFGS-LAWVTCDEAIAK 317 (405)
Q Consensus 250 -----------i~~~l~~~~~~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~~~~-~~~~~~~~~~~~ 317 (405)
....++.-....+++++.||||++++++++++|+|+++|+.+ +++|+++|++|.. +.+.+|+..++.
T Consensus 250 ~~~~~~~~~~~~~~~vr~g~~~yg~~~~~e~Gr~~~~~a~~l~t~Vi~vk~~~-g~~~a~v~~G~~dg~~~~l~~~~~~~ 328 (420)
T 2p3e_A 250 KPEDKEPAPQDLADLLKDLLENVKAKIILEPGRSIMGNAGILITQVQFLKDKG-SKHFIIVDAGMNDLIRPSIYNAYHHI 328 (420)
T ss_dssp STTCCCCCHHHHHHHHTTTC--CCSEEEECCSHHHHGGGEEEEEEEEEEEEET-TEEEEEESCCTTTCCHHHHHCCCCCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCEEEEeCCHHHHhhceEEEEEEEEEEecC-CcEEEEEcCchhcccchhhhCcccee
Confidence 111221111123578889999999999999999999999875 3788888887764 455666654421
Q ss_pred cccCCCCCCCCccCCCCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCCCccccccCCCCCCCCCCCceE
Q 037610 318 CTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEMGAYTTACGTNFNGYSTVAIPT 393 (405)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~~~fn~~~~p~~~~ 393 (405)
.++... ....++++|+|++||++|+++.++.+|++++||+|+|.++|||+++|+|+||++++|.++.
T Consensus 329 -v~v~~~--------g~~~~~~~i~G~~Cms~D~~~~d~~lp~~~~GD~v~~~~~gAY~~~~~s~fn~~~~p~~~~ 395 (420)
T 2p3e_A 329 -IPVETK--------ERKKVVADIVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPRAAEVL 395 (420)
T ss_dssp -EESBCC--------C---CEEEEECSSSSTTCEEEEEEECCCCCTTCEEEECSCTTTTGGGCBCGGGCCCCEEEE
T ss_pred -EecCCC--------CCCceeEEEEccCCCCccEEeecccCCCCCCCCEEEEeCCCcchhhhhhhhhcCCCCeEEE
Confidence 222210 1123679999999999999999999999999999999999999999999999999998644
No 18
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3e-43 Score=364.34 Aligned_cols=352 Identities=19% Similarity=0.296 Sum_probs=269.2
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHcC----
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLP----------MIHPHYAVKCNPEPALLEALAALG---- 97 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~----------~~~i~yavKaN~~~~vl~~l~~~G---- 97 (405)
.++.++++++..+ +++| |+||+|++.|++|+++|+++|+ +++++||+|||+++.|++.+.+.|
T Consensus 29 v~l~~l~~~l~~~--~~gT-P~yV~D~d~L~~ni~~l~~af~~a~~~~~y~g~~~i~YAVKAN~~~~Vl~~L~~~Ga~~g 105 (619)
T 3nzp_A 29 PAIIDIVKELRDD--GYKG-PLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYN 105 (619)
T ss_dssp CBHHHHHHHHHHT--TCCS-CEEEECHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEGGGCCCHHHHHHHHHHTGGGT
T ss_pred CCHHHHHHHHHhc--CCCC-CEEEEcHHHHHHHHHHHHHHHHHHhhhcccCCCEEEEEEEeccCcHHHHHHHHHhCCCCC
Confidence 7899999998665 7999 9999999999999999998885 368999999999999999999988
Q ss_pred CeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHH---HcCCc-EEEecCHHHHHHHHhHC-----CCCeEEEEE
Q 037610 98 SNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAA---SVGVN-LTTVDSVEELDKIRNWH-----PKSDLLIRI 168 (405)
Q Consensus 98 ~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~---~~gv~-~i~vds~~el~~i~~~~-----~~~~v~lRi 168 (405)
+||||+|.+|+..++++|+++.+|+++| .|++++++.|+ +.|.. .++|||++||++|.+.+ +..+++|||
T Consensus 106 ~G~dvaS~~El~~al~aG~~~~~Iv~nG-~K~~e~I~~Al~a~~~g~~v~ivVDS~~ELe~l~~~a~~~g~~~~~V~LRI 184 (619)
T 3nzp_A 106 YGLEAGSKAELLLAMAYNNEGAPITVNG-FKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRV 184 (619)
T ss_dssp CEEEECSHHHHHHHHHHSCTTSEEEECS-CCCHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTSCSCCCEEEEEB
T ss_pred ceEEEeCHHHHHHHHhcCCCCCEEEeCC-CCCHHHHHHHHhhhhcCCcEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEE
Confidence 7999999999999999999988888877 59999999987 55543 58999999999998764 678899999
Q ss_pred ecCCCC-CCCCCCC---CCCCCCCChhhHHHHHHHHHHc-CC-eEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 037610 169 KSPDDS-GAKYPLD---SKYGAGHHPQEIMPLLKAAEAS-GL-SVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 169 ~~~~~~-~~~~~~~---srfGi~~~~~e~~~~~~~~~~~-~l-~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G 242 (405)
|++... |..++++ +|||+ +.+++.++++.+++. .+ ++.|||||+||++.+.+.|.++++++.++++.+++.|
T Consensus 185 np~~~g~~~~~~TGg~~sKFGi--~~ee~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~al~~~~~l~~~L~~~G 262 (619)
T 3nzp_A 185 RLHSAGVGIWAKSGGINSKFGL--TSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMG 262 (619)
T ss_dssp CCTTC-------------CCSB--CHHHHHHHHHHHHHTTCTTTEEEEECCCCSCBCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCCcccccCCCCCccCcC--CHHHHHHHHHHHHhCCCCCceeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 986432 2334444 89999 999999999998876 45 6999999999999999999999999999888775443
Q ss_pred CCc--------------------------hhHH---HHHHHHHhCC---CCCcEEEECCchhhhccceeEEEEEEEEEEe
Q 037610 243 NNK--------------------------MRKL---FKLIFRELLP---GSSLKVISEPGRFFAASAFTLYAQIIGKRVR 290 (405)
Q Consensus 243 ~~~--------------------------~~~l---i~~~l~~~~~---~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~ 290 (405)
+++ ++.+ +...+++++. .++++|++||||+++++|++|+|+|+++|..
T Consensus 263 ~~~l~~LDiGGG~gI~Y~~~~~~~s~~~~l~eya~~I~~~l~~~~~~~~~~~p~Ii~EPGR~iva~aGvLvt~Vi~vk~~ 342 (619)
T 3nzp_A 263 AKNLKAINLGGGLAVEYSQFKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQ 342 (619)
T ss_dssp CTTCCEEEEESCBCCCCCCSSSCCSCSSCHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCHHHHGGGEEEEEEEEEEECC
T ss_pred CCCCCEEEeCCCcCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEeccHHHHHhhhhEEEEEEEEecC
Confidence 201 1111 3344555433 3678999999999999999999999998863
Q ss_pred CC------------------------------------------------------------------------------
Q 037610 291 GE------------------------------------------------------------------------------ 292 (405)
Q Consensus 291 ~~------------------------------------------------------------------------------ 292 (405)
..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~d~~~~~~~~~~~f~~g~~~l~~ra~~e~l~~~~~~~~~~~~~~ 422 (619)
T 3nzp_A 343 EYAENKLILKKQNPKLIDELYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGD 422 (619)
T ss_dssp CCCGGGSCCCSSCCHHHHHHHHHHHHCCTTTHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCcccccCCCccccHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 20
Q ss_pred --------------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCCCeee--cC-
Q 037610 293 --------------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAFDEVF--TG- 355 (405)
Q Consensus 293 --------------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~--~~- 355 (405)
..+|++|=+.+.++...+==++..+.-|+.... ..+..+..+.+-||+|.+.+- ..
T Consensus 423 ~~~~~~~~~l~~~~~~~y~~n~S~fqslpD~W~i~q~fpi~Pi~rl~-------e~p~~~~~l~diTCDsdg~i~~~~~~ 495 (619)
T 3nzp_A 423 KQNPADLLAIQDEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLD-------EEPTRSASIWDITCDSDGEISYSKDK 495 (619)
T ss_dssp ------------CCSBEEEESSCTTTTCHHHHHSSCCCCEEESSCTT-------SCCCCBBCCEESCSCTTSBCCCCSSS
T ss_pred cccchhHHHHHHHhhHHheeeehhhccCcchhhcCcccceeeccccC-------CCcceeeEEecccccCCCccccCCcc
Confidence 134555555555543332112222233444332 345678889999999988843 22
Q ss_pred -CCCCCCC-CC--CEEEEcCCCccccccCCCCCCCCCCCceEEEE
Q 037610 356 -HKLPELE-VN--DWLVFSEMGAYTTACGTNFNGYSTVAIPTYVV 396 (405)
Q Consensus 356 -~~lp~l~-~G--D~l~~~~~GAY~~~~~~~fn~~~~p~~~~~~~ 396 (405)
+.||+++ .| =+|-|+.+|||+-.++..-|-|..|..+....
T Consensus 496 ~l~lh~~~~~~~~y~lg~fl~GAYQe~lg~~HnLfg~~~~v~v~~ 540 (619)
T 3nzp_A 496 PLFLHDVDVEKENYFLGFFLVGAYQEVLGMKHNLFTHPTEAIISI 540 (619)
T ss_dssp CCBCCCCCTTTSCCEEEECSCSSSTTTTCCCTTSCCCCEEEEEEE
T ss_pred cccCCCCCCCCCCcEEEEEccchHHHHHhhccccCCCCCEEEEEE
Confidence 3456776 33 36889999999999998888888888665553
No 19
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=100.00 E-value=3.1e-43 Score=365.96 Aligned_cols=352 Identities=18% Similarity=0.228 Sum_probs=265.8
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHcC--Ce
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLP----------MIHPHYAVKCNPEPALLEALAALG--SN 99 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~----------~~~i~yavKaN~~~~vl~~l~~~G--~g 99 (405)
.++.++++++..+ +++| |+||+|++.|++|+++|+++|+ +++++||+|||+++.|++.+.+.| +|
T Consensus 70 v~l~eLa~~l~~~--~~gT-PlyV~D~d~Lr~ni~~l~~af~~a~~~~~Y~~~~~i~YAvKAN~~~~Vl~~l~~~G~~~G 146 (666)
T 3nzq_A 70 VDLAQLVKTREAQ--GQRL-PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146 (666)
T ss_dssp EEHHHHHHHHHHT--TCCS-SEEEECHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEGGGCCCHHHHHHHHTSSSCEE
T ss_pred cCHHHHHHHHHhc--cCCC-CEEEeCHHHHHHHHHHHHHHHHHhHHhhcccCCeEEEEEEeeCChHHHHHHHHHcCCCce
Confidence 6899999987665 7999 9999999999999999998885 378999999999999999999999 89
Q ss_pred EEEcCHHHHHHHHhCCCCCC-cEEEcCCCCCHHHHHHHHH---cCCc-EEEecCHHHHHHHHhH----CCCCeEEEEEec
Q 037610 100 FDCGSRSEIEAVLLLDVSPD-RIIYANPCKPVSHIKYAAS---VGVN-LTTVDSVEELDKIRNW----HPKSDLLIRIKS 170 (405)
Q Consensus 100 ~~vaS~~E~~~a~~~G~~~~-~Ii~~gp~k~~~~l~~a~~---~gv~-~i~vds~~el~~i~~~----~~~~~v~lRi~~ 170 (405)
|||+|.+|+..++++|++++ +|+++| .|++++|+.|++ .|+. .++|||++||++|.+. ++..+++||||+
T Consensus 147 ~dvaS~gEl~~al~aG~~p~~iIv~nG-~K~~eeI~~Al~~~~~G~~v~ivVDS~~ELe~L~~~A~~~g~~~~V~LRVnp 225 (666)
T 3nzq_A 147 LEAGSKAELMAVLAHAGMTRSVIVCNG-YKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPRLGVRARL 225 (666)
T ss_dssp EEESSHHHHHHHHHHHTTSCCEEEECS-CCCHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHTTCCCCEEEEBCC
T ss_pred EEEeCHHHHHHHHHcCCCCCcEEEEcC-CCCHHHHHHHHHhhccCCCEEEEECCHHHHHHHHHHHHHcCCCceEEEEEEe
Confidence 99999999999999999884 555555 799999999985 4654 4899999999999875 356899999999
Q ss_pred CCCC-CCCCCCC---CCCCCCCChhhHHHHHHHHHHc-CCe-EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-
Q 037610 171 PDDS-GAKYPLD---SKYGAGHHPQEIMPLLKAAEAS-GLS-VVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN- 243 (405)
Q Consensus 171 ~~~~-~~~~~~~---srfGi~~~~~e~~~~~~~~~~~-~l~-l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~- 243 (405)
+.+. +..+.++ +|||+ +.+++.++++.+++. .++ +.|||||+||++.+.+.|.++++++.++++.+++.|+
T Consensus 226 ~~~~~~~~i~TG~~~SKFGi--~~~e~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~ai~~~~~l~~~L~~~G~~ 303 (666)
T 3nzq_A 226 ASQGSGKWQSSGGEKSKFGL--AATQVLQLVETLREAGRLDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVN 303 (666)
T ss_dssp SSSCSSTTCSSSSSCCCSCB--CHHHHHHHHHHHHHTTCTTTEEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCCCcCccccCCCCCcCcC--CHHHHHHHHHHHHhCCCCCCeEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7653 2334443 89999 999999999988775 565 9999999999999999999999999999888764332
Q ss_pred ------------C--------------chhHH---HHHHHHHhCC---CCCcEEEECCchhhhccceeEEEEEEEEEEeC
Q 037610 244 ------------N--------------KMRKL---FKLIFRELLP---GSSLKVISEPGRFFAASAFTLYAQIIGKRVRG 291 (405)
Q Consensus 244 ------------~--------------~~~~l---i~~~l~~~~~---~~~~~l~~EPGr~lv~~a~~l~t~V~~~k~~~ 291 (405)
+ +++.+ +..++++++. .+.++|++||||+++++|++|+++|+++|..+
T Consensus 304 l~~LDiGGGfgI~Y~~~~~~~~~s~~~~leeya~~I~~~l~~~~~~~~~~~p~Ii~EPGRaiVa~aGvLvt~Vi~vK~~~ 383 (666)
T 3nzq_A 304 IQCFDVGGGLGVDYEGTRSQSDCSVNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNE 383 (666)
T ss_dssp CCEEECCSCCCCCSSSSCSSSTTCCSSCHHHHHHHHHHHHHHHHHHHTCCCCEEEECCHHHHHTTSEEEEEEEEEEECCC
T ss_pred CCEEEeCCCcCCCcCCccccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcEEEEecCHHHHHhhhEEEEEEEEEEecC
Confidence 0 12222 3444555443 36799999999999999999999999998742
Q ss_pred Ce------------------------------------------------------------------------------
Q 037610 292 EL------------------------------------------------------------------------------ 293 (405)
Q Consensus 292 ~~------------------------------------------------------------------------------ 293 (405)
..
T Consensus 384 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~~da~~~~~~~~~~f~~g~~~l~~ra~~e~l~~~~~~~~~~~~ 463 (666)
T 3nzq_A 384 YTVPTAPAEDAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGIFSLQERAWAEQLYLSMCHEVQKQL 463 (666)
T ss_dssp CCCCCCCCTTSCHHHHHHHHHHHHHSSSSCSTTHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCccccHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 10
Q ss_pred -------------------eEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEEeccCcCCC----C
Q 037610 294 -------------------REYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTVFGPTCDAF----D 350 (405)
Q Consensus 294 -------------------~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~G~~C~~~----D 350 (405)
.+|++|=+.+.++...+==++..+.-|+... ...+..+..+.+-||+|. +
T Consensus 464 ~~~~~~~~~~~~~l~~~l~~~y~~n~S~fqslPD~W~i~q~fpi~Pi~rl-------~e~p~~~~~l~diTCDsdG~i~~ 536 (666)
T 3nzq_A 464 DPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVLPLEGL-------DQVPERRAVLLDITCDSDGAIDH 536 (666)
T ss_dssp CTTSGGGHHHHHHHHHTTCEEEEESSCHHHHCTHHHHSCCCCCEEESSCT-------TSCCCEEEEEEESCSSTTCBCCC
T ss_pred hccccCChHHHHHHHHHHhHHheeehhhhccCcchhhhccccceeecccc-------CCCcceeeEEeccccCCCCchhh
Confidence 0222221111111110000111111222222 134678999999999996 3
Q ss_pred eee-----cCCCCCCCCCCC--EEEEcCCCccccccCCCCCCCCCCCceEEEE
Q 037610 351 EVF-----TGHKLPELEVND--WLVFSEMGAYTTACGTNFNGYSTVAIPTYVV 396 (405)
Q Consensus 351 ~l~-----~~~~lp~l~~GD--~l~~~~~GAY~~~~~~~fn~~~~p~~~~~~~ 396 (405)
++- ..+.||+++.|. +|-|+.+|||+-.++..-|-|..|..+....
T Consensus 537 fi~~~~~~~~l~lh~~~~~e~y~lg~Fl~GAYQe~lg~~HnLfg~~~~v~v~~ 589 (666)
T 3nzq_A 537 YIDGDGIATTMPMPEYDPENPPMLGFFMVGAYQEILGNMHNLFGDTEAVDVFV 589 (666)
T ss_dssp EEETTEEESSEEECSCCTTSCCEEEECSCCSSCGGGCCCTTSCCCCEEEEEEE
T ss_pred ccCCCCccccccccccCCCCccEEEEEecchhhHHhccccccCCCCCEEEEEE
Confidence 332 124566787665 6889999999999998888889998766554
No 20
>3n2o_A ADC, biosynthetic arginine decarboxylase; lyase; HET: PLP; 2.30A {Vibrio vulnificus}
Probab=100.00 E-value=1.3e-42 Score=360.46 Aligned_cols=253 Identities=18% Similarity=0.271 Sum_probs=210.1
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEEEeHHHHHHHHHHHHHhCC----------CCceeeeeccCCcHHHHHHHHHc-----
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYLMDLGVVVSLYNHMISNLP----------MIHPHYAVKCNPEPALLEALAAL----- 96 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v~d~~~l~~n~~~~~~~~~----------~~~i~yavKaN~~~~vl~~l~~~----- 96 (405)
.++.++++.+..+ +++| |+||+|++.|++|+++|+++|+ +++++||+|||+++.|++.+.+.
T Consensus 48 v~l~eLa~~l~~~--~~gT-PlyV~D~d~L~~ni~~l~~af~~a~~~~~y~~~~~i~YAvKAN~~~~Vl~~l~~~G~~~~ 124 (648)
T 3n2o_A 48 IQLSKIVKQLEER--QLNV-PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 124 (648)
T ss_dssp EEHHHHHHHHHHT--TCCS-SEEEECHHHHHHHHHHHHHHHHHHHHHHTCSSCEEECEEGGGCCCHHHHHHHHHHHHHST
T ss_pred cCHHHHHHHHhhc--CCCC-CEEEEeHHHHHHHHHHHHHHHHHHHHhhcccCCeEEEEEEeecCcHHHHHHHHHhCCccc
Confidence 5788999887654 7999 9999999999999999998885 47899999999999999999998
Q ss_pred --CCeEEEcCHHHHHHHHhCCCCCCc-EEEcCCCCCHHHHHHHHH---cCCc-EEEecCHHHHHHHHhH----CCCCeEE
Q 037610 97 --GSNFDCGSRSEIEAVLLLDVSPDR-IIYANPCKPVSHIKYAAS---VGVN-LTTVDSVEELDKIRNW----HPKSDLL 165 (405)
Q Consensus 97 --G~g~~vaS~~E~~~a~~~G~~~~~-Ii~~gp~k~~~~l~~a~~---~gv~-~i~vds~~el~~i~~~----~~~~~v~ 165 (405)
|+|+||+|.+|+..++++|+++++ |+++| .|++++|+.|++ .|+. .++|||++||++|.+. ++..+++
T Consensus 125 ~~g~GlDvaS~gEL~~al~aG~~~e~iIv~nG-~K~~eeI~~Al~~~~~G~~v~IvVDS~~EL~~I~~~A~~~g~~~~V~ 203 (648)
T 3n2o_A 125 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNG-YKDREYIRLALIGEKLGHKVFIVLEKMSELDLVLREAKSLGVTPRLG 203 (648)
T ss_dssp TCCCEEEECSHHHHHHHHHHTSSSCCEEEECS-CCCHHHHHHHHHHHHTTCEEEEEECSTHHHHHHHHHHHHHTCCCEEE
T ss_pred cCCceEEecCHHHHHHHHHcCCCCCcEEEecC-CCCHHHHHHHHHhhcCCCCEEEEECCHHHHHHHHHHHHhcCCCcEEE
Confidence 589999999999999999999865 66666 699999999984 6754 4899999999999875 4578999
Q ss_pred EEEecCCCC-CCCCCC---CCCCCCCCChhhHHHHHHHHHHc-CCe-EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHH
Q 037610 166 IRIKSPDDS-GAKYPL---DSKYGAGHHPQEIMPLLKAAEAS-GLS-VVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAA 239 (405)
Q Consensus 166 lRi~~~~~~-~~~~~~---~srfGi~~~~~e~~~~~~~~~~~-~l~-l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~ 239 (405)
||||++.+. +..+.+ .+|||+ +.+++.++++.+++. .++ +.|||||+||++.+.+.|.++++++.++++.++
T Consensus 204 LRInp~~~~~~~~i~TGg~~SKFGi--~~~e~~~ll~~l~~~~~L~~l~GLHfHiGSqi~d~~~~~~al~~~~~l~~~L~ 281 (648)
T 3n2o_A 204 IRIRLASQGAGKWQASGGEKSKFGL--SASQVLNVISRLKKENQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELR 281 (648)
T ss_dssp EEBCCSTTSTTTTCSSSSCCCCCCB--CHHHHHHHHHHHHHTTCGGGEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCCCCcCcC--CHHHHHHHHHHHHhCCCCCceEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999997653 222333 389999 999999999988875 465 999999999999999999999999999988776
Q ss_pred hCCC-------------C--------------chhHH---HHHHHHHhCC---CCCcEEEECCchhhhccceeEEEEEEE
Q 037610 240 RTSN-------------N--------------KMRKL---FKLIFRELLP---GSSLKVISEPGRFFAASAFTLYAQIIG 286 (405)
Q Consensus 240 ~~G~-------------~--------------~~~~l---i~~~l~~~~~---~~~~~l~~EPGr~lv~~a~~l~t~V~~ 286 (405)
+.|+ + +++.+ +..++++++. .+.++|++||||+++++|++++++|++
T Consensus 282 ~~G~~l~~LDiGGGfgI~Y~~~~~~~~~s~~~~leeya~~I~~~l~~~~~~~~~~~p~Ii~EPGR~iVa~aGvLvt~Vi~ 361 (648)
T 3n2o_A 282 TLGANITYFDVGGGLAIDYDGTRSQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIG 361 (648)
T ss_dssp HTTCCCCEEECCSCBCCCTTSCCCSSTTSCSCCHHHHHHHHHHHHHHHHHHHTCCCCEEEECCHHHHHGGGEEEEEEEEE
T ss_pred hcCCCCcEEEeCCCcCCCcCCccccccccCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCHHHHHhhheEEEEEEE
Confidence 4332 0 12222 3444555443 367899999999999999999999999
Q ss_pred EEEe
Q 037610 287 KRVR 290 (405)
Q Consensus 287 ~k~~ 290 (405)
+|..
T Consensus 362 vK~~ 365 (648)
T 3n2o_A 362 TETY 365 (648)
T ss_dssp EECC
T ss_pred EEec
Confidence 9874
No 21
>2dy3_A Alanine racemase; alpha/beta barrel, isomerase; HET: PLP; 2.10A {Corynebacterium glutamicum}
Probab=100.00 E-value=2e-37 Score=305.42 Aligned_cols=297 Identities=15% Similarity=0.086 Sum_probs=216.8
Q ss_pred cEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcCC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
|+++||+++|++|++++++.+++++++|++|| |++++|++.+.++|+ +|+|+|.+|++.++++|++++ |++.|+
T Consensus 4 ~~~~idl~~l~~N~~~~~~~~~~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~vas~~E~~~~~~~G~~~~-il~~~~ 82 (361)
T 2dy3_A 4 LTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQE-VLCWIW 82 (361)
T ss_dssp EEEEECHHHHHHHHHHHHHHHTTSEEEEECHHHHHHTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCSE-EEECCC
T ss_pred eEEEEeHHHHHHHHHHHHHhCCCcEEEEEEEecCcCCCHHHHHHHHHHCCCCEEEEeEHHHHHHHHhcCCCCC-EEEECC
Confidence 89999999999999999999988899999999 789999999999998 999999999999999999865 667777
Q ss_pred CCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCC-CCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-cC
Q 037610 127 CKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHP-KSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEA-SG 204 (405)
Q Consensus 127 ~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~-~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~-~~ 204 (405)
+++++++.++++++ .++|||++++++|.+.++ ..+++|||++++ +|||+ +++++.++++.+++ ++
T Consensus 83 -~~~~~~~~~~~~~i-~~~vds~~~l~~l~~~a~~~~~v~l~vdtG~---------~R~G~--~~~~~~~~~~~~~~~~~ 149 (361)
T 2dy3_A 83 -TPEQDFRAAIDRNI-DLAVISPAHAKALIETDAEHIRVSIKIDSGL---------HRSGV--DEQEWEGVFSALAAAPH 149 (361)
T ss_dssp -CTTSCHHHHHTTTC-EEEECSHHHHHHHHTSCCSCEEEEEEBCCSS---------CSSSB--CHHHHHHHHHHHHTCTT
T ss_pred -CCHHHHHHHHHcCC-EEEECCHHHHHHHHHhCccCCEEEEEEeCCC---------CCCCC--CHHHHHHHHHHHHhCCC
Confidence 77889999999999 589999999999998765 356667766432 89999 99999999998877 58
Q ss_pred CeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHH--HHH-HH----HHhCC--CCCcEEE-------E
Q 037610 205 LSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKL--FKL-IF----RELLP--GSSLKVI-------S 267 (405)
Q Consensus 205 l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l--i~~-~l----~~~~~--~~~~~l~-------~ 267 (405)
+++.|||+|++++.. +...+.++++++.++.+.+++.|+ +++.+ -++ .+ +..++ ++|..++ +
T Consensus 150 l~~~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~g~s~~~~~~~~~~~~~vR~G~~l~g~~~~~~~ 228 (361)
T 2dy3_A 150 IEVTGMFTHLACADEPENPETDRQIIAFRRALALARKHGL-ECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGL 228 (361)
T ss_dssp EEEEEEECCCC--------CHHHHHHHHHHHHHHHHHTTC-CCCSCBCCCHHHHHHCGGGCTTEECCCGGGGTCCSSTTC
T ss_pred CCEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcCC-CCCeEEEeCCHHHhcCcccCCCEEecchHhhCCCccccc
Confidence 999999999999754 223367888999999888887775 33332 111 11 11222 2332221 2
Q ss_pred CCchhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEE
Q 037610 268 EPGRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTV 341 (405)
Q Consensus 268 EPGr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v 341 (405)
||| ++++++++|+|+.+|+.+. |.+|...........+.+|.+..+ +.+++... + ...+++++|
T Consensus 229 e~~---~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~~--r~l~~~~~-v----~i~g~~~~i 298 (361)
T 2dy3_A 229 EHG---LKPAMTWEAKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGMP--RHAQGKFS-V----TIDGLDYPQ 298 (361)
T ss_dssp CCS---CCCCEEEEEECCEEEECC---------------CCEEEEESCCTTTTCC--GGGTTTCE-E----EETTEEEEE
T ss_pred CCC---ceeEEEEEEEEEEEEEcCCCCEEeeCCEEECCCCCEEEEEeeccccCcC--cccCCCce-E----EECCEEeeE
Confidence 454 7999999999999997421 122222222222223344544332 33443221 1 224578999
Q ss_pred eccCcCCCCeeecCCC-CC-CCCCCCEEEEcCCCcc
Q 037610 342 FGPTCDAFDEVFTGHK-LP-ELEVNDWLVFSEMGAY 375 (405)
Q Consensus 342 ~G~~C~~~D~l~~~~~-lp-~l~~GD~l~~~~~GAY 375 (405)
+|++|| |+++.|+. +| ++++||+|+|.+.+..
T Consensus 299 vG~vcm--D~~~~d~~~~~~~~~~GD~v~~~g~~~~ 332 (361)
T 2dy3_A 299 VGRVCM--DQFVISLGDNPHGVEAGAKAVIFGENGH 332 (361)
T ss_dssp ESCCCS--SCEEEEEETCTTCCCTTCEEEEESTTSC
T ss_pred eeEEec--ccEEEEccCCCCCCCCCCEEEEEcCCCC
Confidence 999998 99999996 89 9999999999987643
No 22
>1xfc_A Alanine racemase; alpha-beta barrel, beta-structure for C-terminal domain, INT aldimine form, isomerase; HET: PLP; 1.90A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-37 Score=305.68 Aligned_cols=304 Identities=12% Similarity=0.077 Sum_probs=226.2
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcE
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRI 121 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~I 121 (405)
+... |+++||+++|++|++++++.+++++++|++|| |++++|++.+.++|+ +|+|+|.+|+..++++|+++ +|
T Consensus 8 ~~~~-~~~~idl~~i~~N~~~l~~~~~~~~l~~vvKanaYG~~~~~i~~~l~~~G~~~~~vas~~Ea~~~~~~G~~~-~I 85 (384)
T 1xfc_A 8 PGLL-AEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITA-PV 85 (384)
T ss_dssp ---C-EEEEEEHHHHHHHHHHHHHHHTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESCHHHHHHHHHTTCCS-CE
T ss_pred CCCC-eEEEEeHHHHHHHHHHHHHhCCCCEEEEEEeeCCcCCChHHHHHHHHHCCCCEEEEeEHHHHHHHHhcCCCC-CE
Confidence 3457 89999999999999999999888999999999 889999999999998 99999999999999999986 48
Q ss_pred EEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCCh---hhHH
Q 037610 122 IYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP---QEIM 194 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~---~e~~ 194 (405)
++.|+ ++.++++.++++++ .++|||++++++|.+. .+..+++|+|++++ +|||+ ++ +++.
T Consensus 86 l~~g~-~~~~~~~~~~~~~i-~~~vds~~~l~~l~~~a~~~~~~~~V~l~vdtG~---------~R~G~--~~~~~~~~~ 152 (384)
T 1xfc_A 86 LAWLH-PPGIDFGPALLADV-QVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGL---------NRNGV--GPAQFPAML 152 (384)
T ss_dssp EECCC-CTTCCCHHHHHTTC-EEEECSHHHHHHHHHHHHHHCCCEEEEEEBCSSC---------CSSSB--CTTTHHHHH
T ss_pred EEEcC-CCHHHHHHHHHcCc-EEEECCHHHHHHHHHHHHhcCCceEEEEEEECCC---------CccCC--CcCcHHHHH
Confidence 88888 78899999999999 5899999999999864 35568888888653 89999 87 8899
Q ss_pred HHHHHHHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHH--HHH--HH---HHhCC--CCCc
Q 037610 195 PLLKAAEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKL--FKL--IF---RELLP--GSSL 263 (405)
Q Consensus 195 ~~~~~~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l--i~~--~l---~~~~~--~~~~ 263 (405)
++++.+++ +++++.|||+|++++.. +...+.++++++.++++.+++.|+ +++.+ -++ .+ ...++ ++|.
T Consensus 153 ~~~~~i~~~~~l~l~Gl~tH~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~l~~g~s~~~~~~~~~~~~~vR~G~ 231 (384)
T 1xfc_A 153 TALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGV-RFEVAHLSNSSATMARPDLTFDLVRPGI 231 (384)
T ss_dssp HHHHHHHHTTSEEEEEEECCC-----CCSHHHHHHHHHHHHHHHHHHHTTC-CCSEEECBCHHHHHHCGGGCCSEECCSG
T ss_pred HHHHHHHhCCCCcEEEEEecCCCcCCCCcHHHHHHHHHHHHHHHHHHhcCC-CCCeEEEecCHHHhcCccccCCEEccCH
Confidence 99998876 58999999999999863 434567889999999988887775 44332 111 11 11222 3333
Q ss_pred EEE-ECCc-h---hhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCC
Q 037610 264 KVI-SEPG-R---FFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKG 332 (405)
Q Consensus 264 ~l~-~EPG-r---~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (405)
.++ ..|. + +.++++++++|+|+.+|+.+. |.+|...+.+..+..+.+|.+..+ +.+.+... +
T Consensus 232 ~lyg~~~~~~~~e~~~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~~--r~l~~~~~-v---- 304 (384)
T 1xfc_A 232 AVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVF--RSLGGRLE-V---- 304 (384)
T ss_dssp GGGTCCSSGGGCCTTCCCCEEEEEECCEEEEECTTCEESGGGCEECSSCEEEEEECCCGGGTCC--GGGTTTCE-E----
T ss_pred HhHCCCcccccccCCCceEEEEEEEEEEEEEcCCCCEEEeCCEEECCCCCEEEEEeeccccCcc--cccCCCCe-E----
Confidence 332 1121 1 357999999999999998522 223333322222333445544432 34443321 1
Q ss_pred CCceeeEEEeccCcCCCCeeecCCC-CC-CCCCCCEEEEcCCCcc
Q 037610 333 LTRTYNSTVFGPTCDAFDEVFTGHK-LP-ELEVNDWLVFSEMGAY 375 (405)
Q Consensus 333 ~~~~~~~~v~G~~C~~~D~l~~~~~-lp-~l~~GD~l~~~~~GAY 375 (405)
...+++++|+|++|| |+++.|+. +| ++++||+|+|.++|+|
T Consensus 305 ~~~g~~~~ivG~vcm--D~~~~d~~~~p~~~~~GD~v~l~g~~~~ 347 (384)
T 1xfc_A 305 LINGRRCPGVGRICM--DQFMVDLGPGPLDVAEGDEAILFGPGIR 347 (384)
T ss_dssp EETTEEEEEESCCCS--SCEEEEEESSSCCCCTTCEEEEECSSTT
T ss_pred EECCEEeeEeeEecc--ceEEEEccCCCCCCCCCCEEEEEeCCCC
Confidence 124578999999999 99999995 89 9999999999999987
No 23
>2vd8_A Alanine racemase; pyridoxal 5'-phosphate, peptidoglycan synthesis, PLP, OPPF, L-alanine, isomerase, D- alanine, pyridoxal phosphate; HET: MLY LLP; 1.47A {Bacillus anthracis} PDB: 2vd9_A* 3ha1_A*
Probab=100.00 E-value=4.4e-37 Score=305.90 Aligned_cols=304 Identities=13% Similarity=0.089 Sum_probs=228.3
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhC-CCCceeeeeccC----CcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcE
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNL-PMIHPHYAVKCN----PEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRI 121 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~-~~~~i~yavKaN----~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~I 121 (405)
..+ |+++||+++|++|++.+++.+ ++++++|++||| ++++|++.+.+.|+ +|+|+|.+|+..++++|++++ |
T Consensus 9 ~~~-~~~~idl~ai~~N~~~l~~~~~~~~~l~~vvKanaYGhg~~~v~~~l~~~G~~~f~vas~~Ea~~lr~~G~~~~-i 86 (391)
T 2vd8_A 9 YRD-TWVEVDLDAIYNNVTHIXEFIPSDVEIFAVVKGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAGITAP-I 86 (391)
T ss_dssp CSS-CEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCSC-E
T ss_pred CCC-eEEEEcHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCChHHHHHHHHHcCCCeEEeecHHHHHHHHhcCCCCc-e
Confidence 457 999999999999999999999 589999999995 78999999999998 899999999999999999876 6
Q ss_pred EEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH---CCCCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhHHHHH
Q 037610 122 IYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW---HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEIMPLL 197 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~---~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~~~~~ 197 (405)
++.|+ +++++++.++++++ .++|||+++++.|.+. .+..+++|+|++++ +|||+ ++ +++.+++
T Consensus 87 l~~g~-~~~~~~~~~~~~~i-~~~vds~~~l~~l~~a~~~~~~~~V~lkvdtGm---------~R~G~--~~~~e~~~~~ 153 (391)
T 2vd8_A 87 LVLGP-SPPRDINVAAENDV-ALTVFQXEWVDEAIXLWDGSSTMXYHINFDSGM---------GRIGI--RERXELXGFL 153 (391)
T ss_dssp EECSC-CCGGGHHHHHHTTE-EEECCCHHHHHHHHHHCCSSCCEEEEEEBCSSC---------CSSSB--CCHHHHHHHH
T ss_pred EEecC-CChHHHHHHHHCCe-EEEEcCHHHHHHHHHHHhcCCceEEEEEEeCCC---------CCCCC--CchhhHHHHH
Confidence 66676 78899999999998 5899999999999872 23456777776543 89999 75 8899999
Q ss_pred HHHHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHH--HHHH-H----HHhCC--CCCcEE-
Q 037610 198 KAAEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKL--FKLI-F----RELLP--GSSLKV- 265 (405)
Q Consensus 198 ~~~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l--i~~~-l----~~~~~--~~~~~l- 265 (405)
+.+++ +++++.|||+|++++.. +...+.+++++|.++.+.+++.|+ +++++ -++. + +..++ ++|..+
T Consensus 154 ~~i~~~~~l~l~Gl~tH~~~~d~~~~~~~~~q~~~f~~~~~~l~~~g~-~~~~~~~gnS~g~~~~~~~~~~~vR~G~~ly 232 (391)
T 2vd8_A 154 XSLEGAPFLELEGVYTHFATADEVETSYFDXQYNTFLEQLSWLXEFGV-DPXFVHTANSAATLRFQGITFNAVRIGIAMY 232 (391)
T ss_dssp HHHTTCTTEEEEEEECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTC-CCCSEECCCHHHHTTCTTCCTTEEEESTTTT
T ss_pred HHHhhcCCceEEEeeeccccccCCCcHHHHHHHHHHHHHHHHHHhccC-CcceEEecchhHhhcCcccCCCEEehhHHhc
Confidence 88876 58999999999999864 333467789999999888877775 33322 1221 1 01111 122111
Q ss_pred -------EECCchhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCC
Q 037610 266 -------ISEPGRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKG 332 (405)
Q Consensus 266 -------~~EPGr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (405)
..|||++.++++++|+|+|+.+|+... |.+|.....+..+..+.+|.+..+ +.+++. . +
T Consensus 233 g~~p~~~~~~~g~~~l~pa~~l~~~V~~vk~~~~G~~v~yg~~~~~~~~~~~a~v~~GyaDg~~--r~l~~~-~-v---- 304 (391)
T 2vd8_A 233 GLSPSVEIRPFLPFXLEPALSLHTXVAHIKQVIXGDGISYNVTYRTXTEEWIATVAIGYADGWL--RRLQGF-E-V---- 304 (391)
T ss_dssp TCCSCTTTGGGCSSCCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCC--GGGTTC-E-E----
T ss_pred CCCCccccccccccccceeEEEEEEeeEEEEcCCCCeEeeCCEEEcCCCcEEEEEeeeeecccc--cccCCC-e-E----
Confidence 136678889999999999999997522 234443333333334556654442 344443 2 2
Q ss_pred CCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC-Cccccc
Q 037610 333 LTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM-GAYTTA 378 (405)
Q Consensus 333 ~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~-GAY~~~ 378 (405)
...+++++|+|++|| |+++.|+ +|++++||+|+|.+. |+|+.+
T Consensus 305 ~v~g~~~~ivG~vcm--D~~~vd~-~~~~~~GD~v~l~g~~~~~~~~ 348 (391)
T 2vd8_A 305 LVNGXRVPIVGRVTM--DQFMIHL-PCEVPLGTXVTLIGRQGDEYIS 348 (391)
T ss_dssp EETTEEEEEESCCCS--SCEEEEE-SSCCCTTCEEEEEEEETTEEEC
T ss_pred EECCeecceecceec--ceeEeec-CCCCCCCCEEEEECCCCCCCCC
Confidence 224578999999998 9999999 789999999998875 455544
No 24
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=100.00 E-value=2.2e-36 Score=300.42 Aligned_cols=302 Identities=15% Similarity=0.084 Sum_probs=225.5
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEE
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRII 122 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii 122 (405)
+.+ |+++||+++|++|++++++.+++++++|++|| ++++.|++.+.+.|+ +|+|+|.+|+..++++|++++ |+
T Consensus 5 ~~~-p~~~idl~~i~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~f~vas~~Ea~~~~~~G~~~~-il 82 (386)
T 1vfs_A 5 PTR-VYAEIDLDAVRANVRALRARAPRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQGR-IM 82 (386)
T ss_dssp CSS-EEEEEEHHHHHHHHHHHHTTSTTSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSE-EE
T ss_pred CCC-eEEEEeHHHHHHHHHHHHHhCCCcEEEEEEEecccCCCHHHHHHHHHHCCCCEEEEeeHHHHHHHHhcCCCCC-EE
Confidence 457 99999999999999999998899999999999 678999999999998 899999999999999999865 55
Q ss_pred EcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHH--
Q 037610 123 YANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPL-- 196 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~-- 196 (405)
+.|+. ++++++.++++++ .++|||++++++|.+. .+..++.|+|++++ +|||+ +++++.++
T Consensus 83 ~~~~~-~~~~~~~~~~~~i-~~~vds~~~l~~l~~~a~~~~~~~~V~l~vdtG~---------~R~G~--~~~e~~~~~~ 149 (386)
T 1vfs_A 83 CWLWT-PGGPWREAIETDI-DVSVSGMWALDEVRAAARAAGRTARIQLKADTGL---------GRNGC--QPADWAELVG 149 (386)
T ss_dssp ECCCC-TTCCHHHHHHTTC-EEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSSC---------CSSSB--CHHHHHHHHH
T ss_pred EECCC-CHHHHHHHHHcCC-EEEECCHHHHHHHHHHHHhcCCceEEEEEEcCCC---------CCCCC--CHhHHHHHHH
Confidence 66664 5689999999999 5899999999999864 45567888887643 89999 88888555
Q ss_pred -HHHHHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHH--HHH--HH---HHhCC--CCCcE
Q 037610 197 -LKAAEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKL--FKL--IF---RELLP--GSSLK 264 (405)
Q Consensus 197 -~~~~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~l--i~~--~l---~~~~~--~~~~~ 264 (405)
++.+++ +++++.|||+|++++.. +...+.++++++.++.+.+++.|+ +++.+ -++ .+ +..++ ++|..
T Consensus 150 ~~~~i~~~~~l~l~Gl~tH~~~~~~~~~~~~~~~~~~f~~~~~~l~~~g~-~~~~~~~g~s~g~~~~~~~~~~~vR~G~~ 228 (386)
T 1vfs_A 150 AAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGV-DPEVRHIANSPATLTLPETHFDLVRTGLA 228 (386)
T ss_dssp HHHHHHHTTSEEEEEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTC-CCSEEEEECHHHHHHCGGGCSSEEEECGG
T ss_pred HHHHHHhCCCceEEEEEecCCCCCCCCcHHHHHHHHHHHHHHHHHHhcCC-CCCeEEecCCHHHHcCccccCCEEEeChh
Confidence 777666 58999999999999863 223456788999998888887775 43322 111 11 11122 22222
Q ss_pred EE-------ECC-chhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCcc
Q 037610 265 VI-------SEP-GRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTS 330 (405)
Q Consensus 265 l~-------~EP-Gr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (405)
++ .++ +++.++++++|+|+|+.+|+.+. |.+|...+.+.....+.+|.+.. ++.+++... +
T Consensus 229 lyg~~p~~~~~~~~~~~l~pa~~l~a~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~--~r~l~~~~~-v-- 303 (386)
T 1vfs_A 229 VYGVSPSPELGTPAQLGLRPAMTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGI--PRNASGRGP-V-- 303 (386)
T ss_dssp GGTCCSCGGGCCTTTTTCCCCEEEEEECCEEEEECTTCEESGGGCEECSSSEEEEEECCCTTTTC--CGGGTTTCE-E--
T ss_pred hhCCCcccccccccccCCceEEEEEEEEEEEEEcCCCCeEeeCCEEECCCCCEEEEEecccccCc--ccccCCCCE-E--
Confidence 21 111 37788999999999999997522 23343333332233344554433 234443221 1
Q ss_pred CCCCceeeEEEeccCcCCCCeeecCCCCCCCC-CCCEEEEcCCCcc
Q 037610 331 KGLTRTYNSTVFGPTCDAFDEVFTGHKLPELE-VNDWLVFSEMGAY 375 (405)
Q Consensus 331 ~~~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~-~GD~l~~~~~GAY 375 (405)
...+++++|+|++|| |+++.|+.+ +++ +||+|+|.++|+|
T Consensus 304 --~i~g~~~~ivG~vcm--D~~~~dv~~-~~~~~GD~v~l~g~~~~ 344 (386)
T 1vfs_A 304 --LVAGKIRRAAGRIAM--DQFVVDLGE-DLAEAGDEAVILGDAER 344 (386)
T ss_dssp --EETTEEEEBCSCCCS--SCEEEEEET-CCCCTTCEEEEECCGGG
T ss_pred --EECCEEeeEeeEeec--CcEEEEccC-CCCCCCCEEEEEeCCCC
Confidence 124578999999998 999999987 899 9999999999987
No 25
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A* 3uw6_A
Probab=100.00 E-value=6.6e-36 Score=296.99 Aligned_cols=296 Identities=12% Similarity=0.086 Sum_probs=219.7
Q ss_pred cEEEEeHHHHHHHHHHHHHhCCCC-ceeeeecc----CCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLPMI-HPHYAVKC----NPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~~~-~i~yavKa----N~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
|+++||+++|++|++.+++.++++ +++|++|| |.++.|++.+.++|+ +|+|+|.+|+..++++|++++ |++.|
T Consensus 8 ~~~~idl~ai~~N~~~l~~~~~~~~~l~~vvKAnaYG~g~~~v~~~l~~~G~~~f~vas~~Ea~~lr~aG~~~~-Il~~g 86 (388)
T 1bd0_A 8 TWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGIEAP-ILVLG 86 (388)
T ss_dssp EEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCSC-EEECS
T ss_pred eEEEEcHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCCHHHHHHHHHHCCCCEEEEeeHHHHHHHHhCCcCCC-EEEEC
Confidence 899999999999999999999988 99999999 789999999999998 999999999999999999764 77888
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHC---CCCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhHHHHHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWH---PKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEIMPLLKAAE 201 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~---~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~~~~~~~~~ 201 (405)
+ +++++++.++++++ .++|||++++++|.+.+ +..+++|+|++++ +|||+ ++ +++.++++.++
T Consensus 87 ~-~~~~~~~~~~~~~i-~~~vds~~~l~~l~~~a~~~~~~~V~lkvdtGm---------~R~G~--~~~~e~~~~~~~i~ 153 (388)
T 1bd0_A 87 A-SRPADAALAAQQRI-ALTVFRSDWLEEASALYSGPFPIHFHLKMDTGM---------GRLGV--KDEEETKRIVALIE 153 (388)
T ss_dssp C-CCGGGHHHHHHTTE-EEEECCHHHHHHHHHHCCCSSCEEEEEEBCSSS---------CSSSB--CSHHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHcCC-EEEECCHHHHHHHHHHhccCCCeEEEEEEcCCC---------CcCCC--CCHHHHHHHHHHHH
Confidence 8 88999999999998 48999999999999764 3356777777543 89999 75 88999999887
Q ss_pred H-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhC-CCCchhHH--HHH-HHH----HhCC--CCCcEEE---
Q 037610 202 A-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAART-SNNKMRKL--FKL-IFR----ELLP--GSSLKVI--- 266 (405)
Q Consensus 202 ~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~-G~~~~~~l--i~~-~l~----~~~~--~~~~~l~--- 266 (405)
+ +++++.|||+|++++.. +...+.++++.|.+ +++. |+ +++.+ -++ .+. ..++ ++|..++
T Consensus 154 ~~~~l~l~Gl~tH~~~~~~~~~~~~~~q~~~f~~----l~~~~g~-~~~~~~~g~S~~~~~~~~~~~~~vR~G~~lyG~~ 228 (388)
T 1bd0_A 154 RHPHFVLEGLYTHFATADEVNTDYFSYQYTRFLH----MLEWLPS-RPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLA 228 (388)
T ss_dssp HSTTEEEEEEECCCSSTTSSCCHHHHHHHHHHHH----HHTTCSS-CCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCC
T ss_pred hCCCceEEEEEEccCCCCCCCcHHHHHHHHHHHH----HHhhcCC-CCCeEEecCCHHHhcCcccCCCEEehhHHHHCCC
Confidence 6 58999999999999864 22344556666555 3333 53 32222 122 111 1122 2232222
Q ss_pred ------ECCchhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCC
Q 037610 267 ------SEPGRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLT 334 (405)
Q Consensus 267 ------~EPGr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (405)
.|| ++.++++++|+|+|+.+|+... |++|...+.+..+..+.+|.+..+ +.+.+. . + ..
T Consensus 229 p~~~~~~~~-~~~l~pa~~l~~~V~~vk~~~~G~~v~Yg~~~~~~~~~~~a~v~~GyaDg~~--r~l~~~-~-v----~v 299 (388)
T 1bd0_A 229 PSPGIKPLL-PYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWL--RRLQHF-H-V----LV 299 (388)
T ss_dssp SCGGGGGGC-SSCCCCCEEEEEECSEEEEECTTCEESGGGCEECCSSEEEEEESCCGGGTCC--GGGGGC-E-E----EE
T ss_pred ccccccccc-ccCcceEEEEEEEEEEEEEcCCCCeEecCCeEECCCCcEEEEEeeeeccCcc--ccccCC-c-E----eE
Confidence 133 5678999999999999997522 234444333333344555644432 344432 2 2 23
Q ss_pred ceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC-Cccccc
Q 037610 335 RTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM-GAYTTA 378 (405)
Q Consensus 335 ~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~-GAY~~~ 378 (405)
.+++++|+|++|| |+++.|+. |++++||+|+|.+. |+|+.+
T Consensus 300 ~g~~~~ivG~vcm--D~~~vdv~-~~~~~GD~v~l~g~~~~~~~~ 341 (388)
T 1bd0_A 300 DGQKAPIVGRICM--DQCMIRLP-GPLPVGTKVTLIGRQGDEVIS 341 (388)
T ss_dssp TTEEEEEESCCCS--SCEEEECS-SCCCTTCEEEEEEEETTEEEC
T ss_pred CCEEeeEEeeccc--ceEEEECC-CCCCCCCEEEEecCCCCCCCC
Confidence 4578999999998 99999998 89999999998875 355544
No 26
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, PLP, TIM barrel, structural genomics, NEW YORK SGX center for structural genomics; HET: PLP; 1.70A {Oenococcus oeni}
Probab=100.00 E-value=1.1e-34 Score=287.54 Aligned_cols=302 Identities=12% Similarity=0.038 Sum_probs=216.0
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEE
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRII 122 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii 122 (405)
..+ |+++||+++|++|++++++.+++++++|++|| ++++.|++.+.+.|+ +|+|+|.+|+..++++|++++ |+
T Consensus 7 ~~~-~~~~idl~~l~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~i~~~l~~~G~~~~~vas~~Ea~~l~~aG~~~~-il 84 (380)
T 3co8_A 7 HRS-TRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAGIDDF-IL 84 (380)
T ss_dssp TSS-CEEEECHHHHHHHHHHHHHHHCCSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEESSHHHHHHHHHTTCCCC-EE
T ss_pred cCC-eEEEEcHHHHHHHHHHHHHhCCCcEEEEEEEecccCCCHHHHHHHHHHcCCCEEEEeeHHHHHHHHhcCCCCC-EE
Confidence 347 99999999999999999998889999999999 568999999999999 899999999999999999865 55
Q ss_pred EcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCC--CCeEEEEEecCCCCCCCCCCCCCCCCCCC-hhhHHHHHHH
Q 037610 123 YANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHP--KSDLLIRIKSPDDSGAKYPLDSKYGAGHH-PQEIMPLLKA 199 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~--~~~v~lRi~~~~~~~~~~~~~srfGi~~~-~~e~~~~~~~ 199 (405)
+.|+ +++++++.++++++ .++|||+++++.|.+.++ ..++.|+|++++ +|||+ + ++++.++++.
T Consensus 85 ~~g~-~~~~~~~~~~~~~i-~~~vds~~~l~~l~~~a~~~~~~V~l~vdtG~---------~R~G~--~~~ee~~~~~~~ 151 (380)
T 3co8_A 85 ILGP-IDVKYAPIASKYHF-LTTVSSLDWLKSADKILGKEKLSVNLAVDTGM---------NRIGV--RSKKDLKDEIEF 151 (380)
T ss_dssp ECSC-CCGGGHHHHHHTTC-EEEECCHHHHHHHHHHCTTCCEEEEEEBCSSS---------CSSSB--CSHHHHHHHHHH
T ss_pred EECC-CCHHHHHHHHHCCC-EEEECCHHHHHHHHHhcccCCceEEEEEcCCC---------CCCCC--CCHHHHHHHHHH
Confidence 6677 78999999999998 589999999999998665 345666665432 89999 8 8999999998
Q ss_pred HHH--cCCeEEEEEEecCCCCCCHHH-HHHHHHHHHHHHHHHHhCCCCchhHHHHH--HH---HH---hCC--CCCcEEE
Q 037610 200 AEA--SGLSVVGVSFHVGSEATNFAA-FRGAIAAAKAVFDTAARTSNNKMRKLFKL--IF---RE---LLP--GSSLKVI 266 (405)
Q Consensus 200 ~~~--~~l~l~Gih~H~gs~~~~~~~-~~~~i~~~~~~~~~~~~~G~~~~~~li~~--~l---~~---~~~--~~~~~l~ 266 (405)
+++ +++++.|||+|++++....+. +.++++.+.++.+. +. .. ...++.++ .+ .. .++ ++|..++
T Consensus 152 i~~~~~~l~l~Gl~tH~~~~~~~~~~~~~~q~~~f~~~~~~-~~-~~-~~~~~~nS~g~~~~~~~~~~~~~~vR~G~~ly 228 (380)
T 3co8_A 152 LQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNRWYELIDG-LI-MP-RYVHVMNSGAAMYHSKELPGCNSIARVGTVVY 228 (380)
T ss_dssp HHHCTTTEEEEEEECCCC---------CHHHHHHHHHHHTT-SC-CC-SEEECBCHHHHHHCGGGCTTSCSEEEESTTTT
T ss_pred HHhhCCCceEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHhc-cC-CC-CcEEEeCCHHHhcCcccccCCCceEcccHhhh
Confidence 876 589999999999998532222 35677777766553 22 11 11111111 11 11 122 2222221
Q ss_pred -E-------CCchhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCC
Q 037610 267 -S-------EPGRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKG 332 (405)
Q Consensus 267 -~-------EPGr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (405)
. || ++.++++++++|+|+.+|+.+. |.+|.....+.....+.+|.+..+ +.+ +... +
T Consensus 229 G~~p~~~~~~~-~~~l~pa~~l~a~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~Dg~~--r~l-~~~~-v---- 299 (380)
T 3co8_A 229 GVEPSEGVLGP-IDKLKPVFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWL--AEY-QDFQ-L---- 299 (380)
T ss_dssp TCCTTTTSSSC-GGGSCCCEEEEEECSEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCC--GGG-TTCE-E----
T ss_pred CcCCCcccccc-ccCcceeEEEEEEEEEEEEcCCCCeEeeCCEEECCCCCEEEEEecCcccccc--ccc-CCCe-E----
Confidence 1 33 6678999999999999998421 223333222222334455644432 334 3221 2
Q ss_pred CCceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC-Ccccccc
Q 037610 333 LTRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM-GAYTTAC 379 (405)
Q Consensus 333 ~~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~-GAY~~~~ 379 (405)
...+++++|+|++|| |+++.|+.. ++++||.|+|.+. |+|..+.
T Consensus 300 ~i~g~~~~ivG~vcm--D~~~vdv~~-~~~~GD~v~l~g~~~~~~~~~ 344 (380)
T 3co8_A 300 LIDGQKCRQVGQIAM--DQMMVALPH-EYPIGTEVTLIGKSGKYENTL 344 (380)
T ss_dssp EETTEEEEEESCCCS--SCEEEEESS-CCCTTCEEEEEEEETTEEECH
T ss_pred EECCEEeEEeccccc--ceEEEECCC-CCCCCCEEEEEeCCCCCCCCH
Confidence 234578999999998 999999987 8999999998884 8887653
No 27
>4ecl_A Serine racemase, vantg; antibiotic resistance, vancomycin resistance, center for STR genomics of infectious diseases (csgid); HET: MSE; 2.02A {Enterococcus faecalis}
Probab=100.00 E-value=1.5e-32 Score=270.94 Aligned_cols=295 Identities=13% Similarity=0.090 Sum_probs=227.1
Q ss_pred EEEEeHHHHHHHHHHHHHhCC-CCceeeeeccC----CcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcCC
Q 037610 53 FYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCN----PEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 53 ~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN----~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
..++|+++|++|++.+++.++ ++++++++||| +.++|++.+.+.|+ +|+|++.+|+..++++|++.+ |++.|+
T Consensus 8 ~l~Idl~al~~N~~~l~~~~~~~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~va~~~Ea~~lr~~G~~~~-ilvlg~ 86 (374)
T 4ecl_A 8 YLEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFAVATIDEGIRLRKYGISSE-ILILGY 86 (374)
T ss_dssp EEEECHHHHHHHHHHHHHTSCTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCSE-EEECSC
T ss_pred EEEEcHHHHHHHHHHHHHhcCCCCEEEEEEccCccCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHhcCCCCC-EEEEeC
Confidence 466999999999999999875 79999999996 78999999999999 999999999999999999765 555566
Q ss_pred CCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-cCC
Q 037610 127 CKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEA-SGL 205 (405)
Q Consensus 127 ~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~-~~l 205 (405)
. ++++++.++++++ .++|||+++++.|.+..+..+++|+|++++ +|||+ . +++.++++.+++ +++
T Consensus 87 ~-~~~~~~~~~~~~i-~~~v~s~~~l~~l~~~~~~~~v~lkvdtGm---------~R~G~--~-~e~~~~~~~i~~~~~l 152 (374)
T 4ecl_A 87 T-SPSRAKELCKYEL-TQTLIDYRYSLLLNKQGYDIKAHIKIDTGM---------HRLGF--S-TEDKDKILAAFSLKHI 152 (374)
T ss_dssp C-CGGGHHHHHHTTC-EEEECCHHHHHHHHTTCCCEEEEEEEESSS---------CSSSE--E-SSCHHHHHHHTTCTTE
T ss_pred C-CHHHHHHHHHCCC-EEEECCHHHHHHHHhcCCCccEEEEEcCCC---------CcCcc--C-HHHHHHHHHHHhCCCc
Confidence 4 6789999999998 489999999999988766678999998754 79999 8 888888887765 589
Q ss_pred eEEEEEEecCCCCC----CHHHHHHHHHHHHHHHHHHHhCCCCchh--HHHHH-HHHH----hCC--CCCcEEE-ECCc-
Q 037610 206 SVVGVSFHVGSEAT----NFAAFRGAIAAAKAVFDTAARTSNNKMR--KLFKL-IFRE----LLP--GSSLKVI-SEPG- 270 (405)
Q Consensus 206 ~l~Gih~H~gs~~~----~~~~~~~~i~~~~~~~~~~~~~G~~~~~--~li~~-~l~~----~~~--~~~~~l~-~EPG- 270 (405)
++.||++|++++.. +...+.+|+++|.++.+.+++.|+ +++ ++-|+ .+.. .++ ++|..++ ..|-
T Consensus 153 ~l~Gl~tH~~~ad~~~~~~~~~~~~q~~~f~~~~~~l~~~g~-~~~~~~~~nSa~~~~~~~~~~d~vR~Gi~lyG~~p~~ 231 (374)
T 4ecl_A 153 KVAGIFTHLCAADSLEENDVAFTNKQIGSFYKVLDWLKSSGL-NIPKVHIQSSYGLLNYPELECDYIRVGVALYGVLSST 231 (374)
T ss_dssp EEEEEECCCSCTTCCSHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCEEECCCHHHHHHCTTCCCSEEEESGGGGTCCSSS
T ss_pred eEEEEEEECCccCcccCcCcHHHHHHHHHHHHHHHHHHHcCC-CCCeEEecCCchhhcCcccCCCEEcccceeeCCCCcc
Confidence 99999999999864 234556899999999998887775 333 22233 1211 122 3343332 1221
Q ss_pred ------hhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCC-CCCCccCCCCcee
Q 037610 271 ------RFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFA-SSFTTSKGLTRTY 337 (405)
Q Consensus 271 ------r~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ 337 (405)
..-..|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++. .. + ..+++
T Consensus 232 ~~~~~~~~~l~pa~~l~a~Vi~vk~~~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~--~R~l~~~~~~-v----~i~g~ 304 (374)
T 4ecl_A 232 NDKTKLELDLRPVLSLKAKVVLIRKIKQGESVGYSRAFTATRDSLIAILPIGYADGF--PRNLSCGNSY-V----LIGGR 304 (374)
T ss_dssp CCCCSSCCCCCCCEEEEEECCEEEEECTTCBSTTCTTCBCSSCEEEEEESCCGGGTC--CGGGTTTSCE-E----EETTE
T ss_pred ccccccccCceEEEEEEEEEEEEEEcCCCCcCCCCCeEECCCCcEEEEEeccccccc--chhccCCceE-E----EECCE
Confidence 1236899999999999998421 23444433344455677887765 4667765 33 3 45789
Q ss_pred eEEEeccCcCCCCeeecCCC-CCCCCCCCEEEEcCC
Q 037610 338 NSTVFGPTCDAFDEVFTGHK-LPELEVNDWLVFSEM 372 (405)
Q Consensus 338 ~~~v~G~~C~~~D~l~~~~~-lp~l~~GD~l~~~~~ 372 (405)
+++|+|++|| |+++.|++ .|++++||.|+|.+.
T Consensus 305 ~~pivGrv~M--D~~~vDvt~~~~~~~Gd~v~l~G~ 338 (374)
T 4ecl_A 305 QAPIVGKICM--DQLAVDVTDIPNVKTGSIATLIGK 338 (374)
T ss_dssp EEEEESCCCS--SCEEEECTTCSSCCTTCEEEEEEE
T ss_pred EEEEEChhhh--ceEEEEcCCCCCCCCCCEEEEEeC
Confidence 9999999999 99999985 678999999997764
No 28
>2rjg_A Alanine racemase; alpha/beta barrel, cell shape, cell WALL biogenesis/degradat isomerase, peptidoglycan synthesis, pyridoxal phosphate; HET: KCX PLP; 2.40A {Escherichia coli} PDB: 2rjh_A* 3b8v_A* 3b8u_A* 3b8t_A* 3b8w_A*
Probab=100.00 E-value=1.9e-32 Score=271.30 Aligned_cols=295 Identities=9% Similarity=0.090 Sum_probs=217.7
Q ss_pred CCccEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEE-E
Q 037610 49 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRII-Y 123 (405)
Q Consensus 49 ~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii-~ 123 (405)
.+ |++++|+++|++|++++++.+++++++|++|| ++.++|++.+.+ ..+|+|+|.+|+..++++|+++ +|+ +
T Consensus 22 ~~-p~~~idl~al~~N~~~l~~~~~~~~l~~vvKanaYGhg~~~v~~~l~~-~~~~~va~~~Ea~~lr~~G~~~-~Il~~ 98 (379)
T 2rjg_A 22 QA-ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD-ADAFGVARLEEALRLRAGGITK-PVLLL 98 (379)
T ss_dssp CC-SEEEEEHHHHHHHHHHHHHHSTTSEEEEECHHHHHTTCHHHHHHHCTT-CSEEEESSHHHHHHHHHTTCCS-CEEET
T ss_pred CC-eEEEEeHHHHHHHHHHHHHhCCCCEEEEEEeecccCCCHHHHHHHHHh-CCEEEEeEHHHHHHHHhCCcCC-CEEEE
Confidence 57 99999999999999999999999999999999 789999999988 6699999999999999999976 466 5
Q ss_pred cCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH--CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHH
Q 037610 124 ANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW--HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAE 201 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~--~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~ 201 (405)
.|+ +++++++.++++++ .++|||+++++.|.+. .+..+++|+|++++ +|||+ +++++.++++.++
T Consensus 99 ~g~-~~~~~~~~~~~~~i-~~~vds~~~l~~l~~a~~~~~~~V~l~vdtGm---------~R~G~--~~~e~~~~~~~i~ 165 (379)
T 2rjg_A 99 EGF-FDARDLPTISAQHF-HTAVHNEEQLAALEEASLDEPVTVWMKLDTGM---------HRLGV--RPEQAEAFYHRLT 165 (379)
T ss_dssp TCC-SCGGGHHHHHHTTE-EEEECSHHHHHHHHHCCCSSCBCEEEEBCSSC---------CSSSB--CHHHHHHHHHHHT
T ss_pred ECC-CCHHHHHHHHHcCc-EEEECCHHHHHHHHhhCCCCCeEEEEEECCCC---------CccCC--CHHHHHHHHHHHH
Confidence 665 78899999999998 5899999999999872 23457888888653 89999 9999999998877
Q ss_pred H-cC-CeEEEEEEecCCCCCCH-HHHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HH---HHhCC--CCCcEEE-ECC-
Q 037610 202 A-SG-LSVVGVSFHVGSEATNF-AAFRGAIAAAKAVFDTAARTSNNKMRKLFKL--IF---RELLP--GSSLKVI-SEP- 269 (405)
Q Consensus 202 ~-~~-l~l~Gih~H~gs~~~~~-~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~--~l---~~~~~--~~~~~l~-~EP- 269 (405)
+ ++ +++.|||+|++++.... ..+.++++++.++.+.++. ++ .+.++ .+ ...++ ++|..++ ..|
T Consensus 166 ~~~~~l~l~Gl~tH~~~~d~~~~~~~~~q~~~f~~~~~~l~~----~~-s~gnS~~~~~~~~~~~~~vR~G~~lyG~~p~ 240 (379)
T 2rjg_A 166 QCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPG----QR-SIAASGGILLWPQSHFDWVRPGIILYGVSPL 240 (379)
T ss_dssp TCSSBCSSCEEECCCSSTTCTTSTHHHHHHHHHHHHHTTCCS----CE-ECCCHHHHHHCGGGCSSEECCCGGGGTCCSS
T ss_pred hCCCcEEEEEEEEECCccCCCCcHHHHHHHHHHHHHHhccCC----Ce-EEEECcchhcCcccCCCEECccHHHHCCCcc
Confidence 6 58 99999999999975422 3445677777766543221 11 11111 11 12223 4444432 111
Q ss_pred ------chhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCcee
Q 037610 270 ------GRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTY 337 (405)
Q Consensus 270 ------Gr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (405)
.+..++++++|+|+|+.+|+... +.+|.....+..+..+++|.++. ++.+++... + ...++
T Consensus 241 ~~~~~~~~~~l~pa~~l~a~Vi~vk~~~~G~~v~yg~~~~~~~~~~ia~v~~GyaDG~--~r~l~~~~~-v----~i~g~ 313 (379)
T 2rjg_A 241 EDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGY--PRAAPSGTP-V----LVNGR 313 (379)
T ss_dssp SSSCCGGGGTCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSCEEEEEESCCTTTTC--CTTCCTTCE-E----EETTE
T ss_pred cccccccccCCceEEEEEEEEEEEEEcCCCCEEeeCCEEECCCCcEEEEEeeecccCc--ccccCCCcE-E----EECCE
Confidence 14567999999999999998532 23343332222234455665554 244543322 1 23457
Q ss_pred eEEEeccCcCCCCeeecCCC-CCCCCCCCEEEEcCCC
Q 037610 338 NSTVFGPTCDAFDEVFTGHK-LPELEVNDWLVFSEMG 373 (405)
Q Consensus 338 ~~~v~G~~C~~~D~l~~~~~-lp~l~~GD~l~~~~~G 373 (405)
+++|+|++|| |+++.|+. +|++++||.|+|.+.+
T Consensus 314 ~~~ivG~vcm--D~~~vdv~~~~~~~~GD~v~l~g~~ 348 (379)
T 2rjg_A 314 EVPIVGRVAM--DMICVDLGPQAQDKAGDPVILWGEG 348 (379)
T ss_dssp EEEBCSCCCS--SCEEEECCTTCCCCTTCEEEEEBTT
T ss_pred EeeEeeeecc--ccEEEECCCCCCCCCCCEEEEECCC
Confidence 8999999999 99999996 7899999999988854
No 29
>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=100.00 E-value=5.2e-32 Score=266.27 Aligned_cols=292 Identities=12% Similarity=0.050 Sum_probs=212.7
Q ss_pred cEEEEeHHHHHHHHHHHHHhCCCCceeeeecc----CCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEE-EcCC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLPMIHPHYAVKC----NPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRII-YANP 126 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKa----N~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii-~~gp 126 (405)
|+++||+++|++|++++++. ++++++|++|| +++++|++.+.+.+.+|+|+|.+|+..++++|++++ |+ +.|+
T Consensus 4 ~~~~idl~~l~~N~~~l~~~-~~~~l~~vvKanaYG~g~~~i~~~l~~~~~~~~va~~~Ea~~~~~~G~~~~-Il~~~g~ 81 (357)
T 1rcq_A 4 ARALIDLQALRHNYRLAREA-TGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQP-ILLLEGF 81 (357)
T ss_dssp CEEEEEHHHHHHHHHHHHHH-HCSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCSC-EEETTCC
T ss_pred eEEEEeHHHHHHHHHHHHhC-CCCeEEEEEEeccccCCHHHHHHHHHHhCCEEEEccHHHHHHHHhCCcCCC-EEEEeCC
Confidence 88999999999999999998 88999999999 679999999987745999999999999999999864 66 7787
Q ss_pred CCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH--CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-c
Q 037610 127 CKPVSHIKYAASVGVNLTTVDSVEELDKIRNW--HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEA-S 203 (405)
Q Consensus 127 ~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~--~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~-~ 203 (405)
+++++++.++++++ .++|||+++++.|.+. .+..+++|+|++++ +|||+ +++++.++++.+++ +
T Consensus 82 -~~~~~~~~~~~~~i-~~~vds~~~l~~l~~a~~~~~~~V~l~vdtG~---------~R~G~--~~~~~~~~~~~i~~~~ 148 (357)
T 1rcq_A 82 -FEASELELIVAHDF-WCVVHCAWQLEAIERASLARPLNVWLKMDSGM---------HRVGF--FPEDFRAAHERLRASG 148 (357)
T ss_dssp -SSGGGHHHHHHTTE-EEEECSHHHHHHHHHCCCSSCEEEEEEBCSSS---------CSSSB--CHHHHHHHHHHHHHTT
T ss_pred -CCHHHHHHHHHcCC-EEEECCHHHHHHHHhhccCCCeEEEEEEcCCC---------CCCCC--CHHHHHHHHHHHHhCC
Confidence 78999999999998 5899999999999871 23356778877543 89999 99999999998776 5
Q ss_pred CCeEEEEEEecCCCCCCH-HHHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HH---HHhCC--CCCcEEE--------E
Q 037610 204 GLSVVGVSFHVGSEATNF-AAFRGAIAAAKAVFDTAARTSNNKMRKLFKL--IF---RELLP--GSSLKVI--------S 267 (405)
Q Consensus 204 ~l~l~Gih~H~gs~~~~~-~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~--~l---~~~~~--~~~~~l~--------~ 267 (405)
++++.|||+|++++.... ..+.++++.+.++.+.++. ++. +.++ .+ ...++ ++|..++ .
T Consensus 149 ~l~l~Gl~th~~~~~~~~~~~~~~~~~~f~~~~~~l~~----~~s-~~ns~~~~~~~~~~~~~vR~G~~lyg~~~~~~~~ 223 (357)
T 1rcq_A 149 KVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEG----EIS-LRNSPAVLGWPKVPSDWVRPGILLYGATPFERAH 223 (357)
T ss_dssp CEEEEEEECCCSSTTCTTCTHHHHHHHHHHHHHTTCCS----CEE-CCCHHHHHHCTTSCCSEECCCGGGGTCCSSSSCC
T ss_pred CCcEEEEEEcccCCCCCCcHHHHHHHHHHHHHHhccCC----CeE-EEeCHHhhcCcccCCCEEccCHHhhCCCcccccc
Confidence 899999999999985432 2344677777666543221 111 1111 11 11122 3333221 1
Q ss_pred CCchhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEEE
Q 037610 268 EPGRFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNSTV 341 (405)
Q Consensus 268 EPGr~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v 341 (405)
++ ++.++++++++|+|+++|+.+. +.+|........+..+.+|.+..+ +.+++... + ...+++++|
T Consensus 224 ~~-~~~~~~a~~l~~~Vi~vk~~~~g~~v~yg~~~~~~~~~~~a~v~~Gy~dg~~--r~l~~~~~-v----~i~g~~~~i 295 (357)
T 1rcq_A 224 PL-ADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYP--RHAADGTL-V----FIDGKPGRL 295 (357)
T ss_dssp TT-GGGCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCC--TTCCTTCE-E----EETTEEEEB
T ss_pred cc-cCCCceEEEEEEEEEEEEEcCCCCEEccCCeEECCCCeEEEEEEeccccCcc--cccCCCCE-E----EECCEEeEE
Confidence 22 5678999999999999998522 223332222222333455655442 34433221 1 124578999
Q ss_pred eccCcCCCCeeecCCC-CCCCCCCCEEEEcCCC
Q 037610 342 FGPTCDAFDEVFTGHK-LPELEVNDWLVFSEMG 373 (405)
Q Consensus 342 ~G~~C~~~D~l~~~~~-lp~l~~GD~l~~~~~G 373 (405)
+|++|| |+++.|+. +|++++||.|+|.+.+
T Consensus 296 vG~vcm--D~~~vd~~~~~~~~~GD~v~l~~~~ 326 (357)
T 1rcq_A 296 VGRVSM--DMLTVDLTDHPQAGLGSRVELWGPN 326 (357)
T ss_dssp CSCCCS--SCEEEECTTCTTCCTTCEEEEESSS
T ss_pred eeEEec--ceEEEECCCCCCCCCCCEEEEECCC
Confidence 999999 99999996 8899999999999865
No 30
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infect disease, iodide SOAK, LLP, CAT-scratch DI isomerase; HET: LLP; 2.04A {Bartonella henselae}
Probab=99.98 E-value=1.9e-32 Score=269.66 Aligned_cols=296 Identities=14% Similarity=0.157 Sum_probs=224.3
Q ss_pred CCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCC----cHHHHHHHHHcCC-eEEEcCHHHHHHHHhCC-CCCCcEE
Q 037610 49 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNP----EPALLEALAALGS-NFDCGSRSEIEAVLLLD-VSPDRII 122 (405)
Q Consensus 49 ~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~----~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G-~~~~~Ii 122 (405)
.+ ++.++|+++|++|++.+++.++++++++++|||+ ..+|++.+.+.|+ +|+|++.+|+..++++| ++.+ |+
T Consensus 19 ~~-~~~~Idl~al~~N~~~l~~~~~~~~l~aVvKAnaYGHG~~~va~~l~~~G~~~f~Va~~~Ea~~lr~ag~~~~~-il 96 (376)
T 3kw3_A 19 AT-AIATIDVRAIVANYRTLAQHVAPTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEALQLKAVLPENVM-IA 96 (376)
T ss_dssp CS-EEEEECHHHHHHHHHHHHHHHTTSEECEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHHSCSSCE-EE
T ss_pred CC-eEEEEcHHHHHHHHHHHHHhCCCCEEEEEECCccccCCHHHHHHHHHHcCCCEEEEeEHHHHHHHHhcCCCCCC-EE
Confidence 45 7889999999999999999988899999999985 6899999999999 99999999999999998 8765 66
Q ss_pred EcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHH
Q 037610 123 YANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLK 198 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~ 198 (405)
+.++. ++++++.++++++ .++|||+++++.|.+. .+..+++|+|++++ +|||+ .++++.++++
T Consensus 97 vl~~~-~~~~~~~~~~~~i-~~~V~s~~~l~~l~~~a~~~~~~~~V~lkVdtGm---------~R~G~--~~~e~~~l~~ 163 (376)
T 3kw3_A 97 LLNGF-PHKAEEFVAQSGI-IPLLNSWSTIEDWQTLCQKKNKKFPAIIQVDTNM---------SRLGL--DKKELQKLIK 163 (376)
T ss_dssp ETTCC-CTTCHHHHHHTTC-EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSSC---------CSSSB--CHHHHHHHHH
T ss_pred EEeCC-CHHHHHHHHHCCC-EEEECCHHHHHHHHHHHHHcCCCeEEEEEECCCC---------CcccC--CHHHHHHHHH
Confidence 66654 5678899999998 4899999999998854 46788999998654 79999 8999998888
Q ss_pred HHHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHH--H---HHhCC--CCCcEEE-EC
Q 037610 199 AAEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKLFKLI--F---RELLP--GSSLKVI-SE 268 (405)
Q Consensus 199 ~~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~~--l---~~~~~--~~~~~l~-~E 268 (405)
.+++ +++++.|+++|+++... +.....+|+++|.++.+.++ ++ + .++.||+ + +.+++ ++|+.++ ..
T Consensus 164 ~i~~~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~--~~-~-~h~aNSa~~l~~~~~~~d~vR~Gi~lYG~~ 239 (376)
T 3kw3_A 164 NPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVLAQLP--TC-K-VSFANSGGIFLGSDFYFDLVRPGIALYGVD 239 (376)
T ss_dssp CCTHHHHSEEEEEECCCSSTTCTTCHHHHHHHHHHHHHHTTSC--CC-C-EECCCHHHHTTCGGGTTTEECCSGGGGTCC
T ss_pred HHHhCCCCcEEEEEEECCCCCCCCcHHHHHHHHHHHHHHhhcc--CC-C-EEEEeChhhhcCccccCCEEecChhhcCCC
Confidence 7644 58999999999998753 44455678888888776443 32 2 3333442 1 12344 5666554 23
Q ss_pred Cch---hhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeE
Q 037610 269 PGR---FFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNS 339 (405)
Q Consensus 269 PGr---~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 339 (405)
|.. .-..|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++... + ..+++++
T Consensus 240 p~~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~--~R~~s~~~~-v----~i~G~~~ 312 (376)
T 3kw3_A 240 PHGKHPTPLKAVVKVEAQVLQSRFIDAGIPVGYRESFMTRRPSTLATISIGYADGW--PRILSNKGT-V----YFNGHKL 312 (376)
T ss_dssp TTCCSSCSCCCCEEEEEEEEEEEEC----------------CCEEEEESCCGGGTC--CGGGTTTCE-E----EETTEEE
T ss_pred CCcccccCCcceEEEEEEEEEEEecCCCCeeccCCeEECCCCeEEEEEEecccccc--hhhcCCCce-E----EECCEEE
Confidence 321 136899999999999998522 34565555555566788997775 466776543 2 4578999
Q ss_pred EEeccCcCCCCeeecCCC-CCC-CCCCCEEEEcCC
Q 037610 340 TVFGPTCDAFDEVFTGHK-LPE-LEVNDWLVFSEM 372 (405)
Q Consensus 340 ~v~G~~C~~~D~l~~~~~-lp~-l~~GD~l~~~~~ 372 (405)
+|+|++|| |+++.|++ .|+ +++||.|+|.+.
T Consensus 313 pivGrv~M--D~~~vDvt~~~~~~~~Gd~v~l~G~ 345 (376)
T 3kw3_A 313 PIVGHISM--DSIIVDATDLDKKPQRGDWVELIGP 345 (376)
T ss_dssp EBCSCCCS--SCEEEECTTCSSCCCTTCEEEEEBT
T ss_pred EEeCeecc--ceEEEEcCCCcccCCCCCEEEEECC
Confidence 99999999 99999995 675 999999998875
No 31
>3e5p_A Alanine racemase; ALR, PLP, SCP, isomerase, pyridoxal phosph; HET: PLP EPE 2PE; 2.50A {Enterococcus faecalis} PDB: 3e6e_A*
Probab=99.98 E-value=3.8e-32 Score=267.46 Aligned_cols=294 Identities=12% Similarity=0.093 Sum_probs=225.0
Q ss_pred cEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccC----CcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCN----PEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN----~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.++|+++|++|++.+++.++ ++++++++||| ..++|++.+.+.|+ +|+|++.+|+..++++|++.+ |++.|
T Consensus 9 ~~~~Idl~al~~N~~~l~~~~~~~~~l~avvKanaYGhg~~~va~~l~~~G~~~f~va~~~Ea~~lr~~G~~~~-Ilvlg 87 (371)
T 3e5p_A 9 TRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDP-ILILS 87 (371)
T ss_dssp CEEEECHHHHHHHHHHHHHSSCSSSEEEEECHHHHHTTCHHHHHHHHHHTTCCCEEESSHHHHHHHHTTTCCSC-EEEEE
T ss_pred eEEEEEHHHHHHHHHHHHHhcCCCCEEEEEECcccccCCHHHHHHHHHHcCCCEEEEEeHHHHHHHHhcCCCCC-EEEEc
Confidence 4677999999999999999987 79999999995 68999999999999 999999999999999999865 55557
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHH-HhHC----CCCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhHHHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKI-RNWH----PKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEIMPLLKA 199 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i-~~~~----~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~~~~~~~ 199 (405)
+ .++++++.++++++ .++|||+++++.| .+.+ +..+++|+|++++ +|||+ .+ +++.++++.
T Consensus 88 ~-~~~~~~~~~~~~~i-~~~V~s~~~l~~l~~~~a~~~~~~~~V~lkvdtGm---------~R~G~--~~~ee~~~~~~~ 154 (371)
T 3e5p_A 88 V-VDLAYVPLLIQYDL-SVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGM---------GRIGF--LTPEETKQAVRF 154 (371)
T ss_dssp E-CCGGGHHHHHHHTC-EEEECCHHHHHHHHHHHCSCCSCCBCEEEEBCSSS---------CSSSB--CSSHHHHHHHHH
T ss_pred C-CCHHHHHHHHHCCC-EEEECCHHHHHHHHHHHHHHcCCceEEEEEECCCC---------CcCCC--CCHHHHHHHHHH
Confidence 6 46889999999998 4899999999999 8764 3467888887643 79999 87 999999998
Q ss_pred HHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHH--HH---HhCC--CCCcEEE-ECC
Q 037610 200 AEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKLFKLI--FR---ELLP--GSSLKVI-SEP 269 (405)
Q Consensus 200 ~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~~--l~---~~~~--~~~~~l~-~EP 269 (405)
+++ +++++.||++|+++... +.....+|+++|.++.+.+++. +...++.||+ +. .+++ ++|+.++ ..|
T Consensus 155 i~~~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~--~~~~h~~NSa~~~~~~~~~~d~vR~Gi~lYG~~p 232 (371)
T 3e5p_A 155 VQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEEL--PRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNP 232 (371)
T ss_dssp HHHSTTBCCCEEECCCSCTTSSCCHHHHHHHHHHHTTSSSCSCC--CSEEECBCHHHHHHCTTSSCSEEEECGGGGTCCT
T ss_pred HHhCCCccEEEEEEEcCCCCCCCcHHHHHHHHHHHHHHHHhhhc--CCeEEEecChhHhcCcccCCCeEeeCceeECCCc
Confidence 776 58999999999999753 4445567888887766544321 1223333442 21 2233 4555443 223
Q ss_pred c------hhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCcee
Q 037610 270 G------RFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTY 337 (405)
Q Consensus 270 G------r~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (405)
. ..-..|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++.. + ..+++
T Consensus 233 ~~~~~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~--~R~ls~~~--v----~i~G~ 304 (371)
T 3e5p_A 233 SGNKLAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGW--LRHLQGFT--V----LVNGK 304 (371)
T ss_dssp TTTSSCCSSCCCCCEEEEEECCCEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTC--CGGGTTCE--E----ESSSC
T ss_pred cccccccccCcceEEEEEEEEEEEEEcCCCCeECcCCeeECCCCcEEEEEeecchhch--hhhcCCCe--E----EECCE
Confidence 2 1246899999999999998632 34565555555566788997775 46666532 3 45789
Q ss_pred eEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC
Q 037610 338 NSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM 372 (405)
Q Consensus 338 ~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~ 372 (405)
+++|+|++|| |+++.|+.. ++++||.|+|.+.
T Consensus 305 ~~pivGrv~M--D~~~vDv~~-~~~~Gd~v~l~G~ 336 (371)
T 3e5p_A 305 RCEIVGRVCM--DQCMIRLAE-EVPVGPVVTLVGK 336 (371)
T ss_dssp EEEEESCCCS--SCEEEEESS-CCCSCCEEEEEEE
T ss_pred EeEEeceecc--cEEEEECCC-CCCCCCEEEEEcC
Confidence 9999999999 999999954 4999999997764
No 32
>3mub_A Alanine racemase; alpha/beta barrel, extended beta-strand domain, pyridoxal PH cofactor, carba lysine, isomerase; HET: LLP KCX; 2.00A {Streptococcus pneumoniae} PDB: 3s46_A*
Probab=99.97 E-value=1e-30 Score=256.84 Aligned_cols=293 Identities=13% Similarity=0.114 Sum_probs=224.0
Q ss_pred cEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccC----CcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCN----PEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN----~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
...++|+++|++|++.+++.++ ++++++++||| ...+|++.+.+. + +|+|++.+|+..++++|++.+ |++.|
T Consensus 9 ~~~~Idl~al~~N~~~l~~~~~~~~~l~aVvKanaYGhg~~~va~~l~~~-~~~f~va~~~Ea~~lr~~G~~~~-ilvlg 86 (367)
T 3mub_A 9 TKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQDD-VDGFCVSNIDEAIELRQAGLSKP-ILILG 86 (367)
T ss_dssp CEEEECHHHHHHHHHHHHHTSCTTCEEEEECHHHHHTTCHHHHHHHHGGG-CSEEEESSHHHHHHHHHTTCCSC-EEEEE
T ss_pred eEEEEeHHHHHHHHHHHHHhCCCCCEEEEEECcccccCCHHHHHHHHHHh-CCeEEEeEHHHHHHHHHcCCCCC-EEEEc
Confidence 4677999999999999999887 79999999995 468999999888 7 999999999999999999875 55456
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHC---CCCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhHHHHHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWH---PKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEIMPLLKAAE 201 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~---~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~~~~~~~~~ 201 (405)
+. ++++++.++++++ .++|||+++++.|.+.+ +..+++|+|++++ +|+|+ .+ +++.++++.++
T Consensus 87 ~~-~~~~~~~~~~~~l-~~~V~s~~~l~~l~~~a~~~~~~~V~lkvdtGm---------~R~G~--~~~ee~~~~~~~i~ 153 (367)
T 3mub_A 87 VS-EIEAVALAKEYDF-TLTVAGLEWIQALLDKEVDLTGLTVHLKIDSGM---------GRIGF--REASEVEQAQDLLQ 153 (367)
T ss_dssp EC-CGGGHHHHHHTTE-EEEECCHHHHHHHHHTTCCCTTCEEEEEECSSC---------CSSSB--CSHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHcCC-EEEECCHHHHHHHHHHHHhcCCeeEEEEECCCC---------CcCCC--CcHHHHHHHHHHHc
Confidence 64 6788999999998 48999999999998876 4578888888654 89999 87 89999988765
Q ss_pred HcCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HHH---HhCC--CCCcEEE-ECCc--
Q 037610 202 ASGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKLFKL--IFR---ELLP--GSSLKVI-SEPG-- 270 (405)
Q Consensus 202 ~~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~--~l~---~~~~--~~~~~l~-~EPG-- 270 (405)
++++++.|+++|+++... +.....+|+++|.++.+.+++. . ...++.|| .+. .+++ ++|+.++ ..|.
T Consensus 154 ~~~l~l~Gl~tH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~-~-~~~h~~NSa~~l~~~~~~~d~vR~Gi~lYG~~p~~~ 231 (367)
T 3mub_A 154 QHGVCVEGIFTHFATADEESDDYFNAQLERFKTILASMKEV-P-ELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGA 231 (367)
T ss_dssp HTTCEEEEEEECCSSTTSSCCHHHHHHHHHHHHHHHTCSSC-C-SEEEEECHHHHHHCGGGCCSEEEECTTTTTCCTTTT
T ss_pred cCCcEEEEEEEEccCCCCCCCHHHHHHHHHHHHHHHHhhhc-C-CeEEEecChHHhcCcccCCCeEEhhhHhhCCCCccc
Confidence 588999999999998753 4445567899988887755432 1 22333333 221 2344 4555543 2232
Q ss_pred ----hhhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCceeeEE
Q 037610 271 ----RFFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRTYNST 340 (405)
Q Consensus 271 ----r~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 340 (405)
..-..|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++.. + ..++++++
T Consensus 232 ~~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~--~R~ls~~~--v----~i~G~~~p 303 (367)
T 3mub_A 232 VLDLPYDLIPALTLESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGW--TRDMQNFS--V----LVDGQACP 303 (367)
T ss_dssp SSCCSSCCCCCEEEEEECSEEEEECTTCEESGGGCEECSSCEEEEEESCCGGGTC--CGGGTTCE--E----EETTEEEE
T ss_pred ccccccCcceEEEEEEEEEEEEEcCCCCeeCCCCeEECCCCeEEEEEeecchhch--hhhcCCCe--E----EECCEEeE
Confidence 1246899999999999998632 34565554555566778897775 46666532 3 45789999
Q ss_pred EeccCcCCCCeeecCCCCCCCCCCCEEEEcCC
Q 037610 341 VFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM 372 (405)
Q Consensus 341 v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~ 372 (405)
|+|++|| |+++.|+.. ++++||.|+|.+.
T Consensus 304 ivGrv~M--D~~~vDv~~-~~~~Gd~v~l~G~ 332 (367)
T 3mub_A 304 IVGRVSM--DQITIRLPK-LYPLGTKVTLIGS 332 (367)
T ss_dssp BCSCCCS--SCEEEEESS-CCCTTCEEEEEEE
T ss_pred EeChhcc--cEEEEECCC-CCCCCCEEEEEeC
Confidence 9999999 999999954 4999999987764
No 33
>4a3q_A Alanine racemase 1; isomerase, PLP-dependent enzymes; HET: PLP; 2.15A {Staphylococcus aureus} PDB: 3oo2_A
Probab=99.97 E-value=8.5e-31 Score=258.48 Aligned_cols=291 Identities=15% Similarity=0.134 Sum_probs=213.0
Q ss_pred cEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCC----cHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCNP----EPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN~----~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+..++|+++|++|++ +++.++ ++++++++|||+ ..+|++.+.+.|+ +|+|++.+|+..++++|++.+ |++.|
T Consensus 9 ~~~~Idl~al~~N~~-l~~~~~~~~~l~aVvKAnaYGhg~~~va~~l~~~G~~~f~Va~~~Ea~~lr~aGi~~~-ilvlg 86 (382)
T 4a3q_A 9 AYMNVDLNAVASNFK-VFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAK-ILVLG 86 (382)
T ss_dssp EEEEEEHHHHHHHHH-HHHHHCTTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHTTTCCSE-EEECS
T ss_pred EEEEEEHHHHHHHHH-HHhhcCCCCEEEEEEeeccccCCHHHHHHHHHHCCCCEEEEeEHHHHHHHHhCCCCCC-EEEEe
Confidence 456699999999999 998775 799999999964 6899999999999 999999999999999999765 55557
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCC-----CCeEEEEEecCCCCCCCCCCCCCCCCCCChhh-HHHHHHH
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHP-----KSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQE-IMPLLKA 199 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~-----~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e-~~~~~~~ 199 (405)
+. ++++++.++++++. ++|||+++++.|.+.+. ..+++|+|++++ +|+|+ .+++ +.++++.
T Consensus 87 ~~-~~~~~~~~~~~~i~-~~V~s~~~l~~l~~~a~~~~~~~~~V~lkvDtGm---------~R~G~--~~~e~~~~~~~~ 153 (382)
T 4a3q_A 87 VL-PAKDIDKAIQHRVA-LTVPSKQWLKEAIKNISGEQEKKLWLHIKLDTGM---------GRLGI--KDTNTYQEVIEI 153 (382)
T ss_dssp CC-CGGGHHHHHHTTCB-EEECCHHHHHHHHHTCCTTCCSCEEEEEEBCSSS---------SSSSB--CCHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHHHHHcCCCceeEEEEECCCC---------CcCCC--ChHHHHHHHHHH
Confidence 64 67899999999995 89999999999998653 456667666543 89999 7776 8899988
Q ss_pred HHH-cCCeEEEEEEecCCCCC-CHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHH--HH---HhCC--CCCcEEE-ECC
Q 037610 200 AEA-SGLSVVGVSFHVGSEAT-NFAAFRGAIAAAKAVFDTAARTSNNKMRKLFKLI--FR---ELLP--GSSLKVI-SEP 269 (405)
Q Consensus 200 ~~~-~~l~l~Gih~H~gs~~~-~~~~~~~~i~~~~~~~~~~~~~G~~~~~~li~~~--l~---~~~~--~~~~~l~-~EP 269 (405)
+++ +++++.|+++|+++... +.+ ..+|+++|.++.+.+ .. ++..++.||+ +. .+++ ++|+.++ ..|
T Consensus 154 i~~~~~l~l~Gl~tH~a~ad~~~~~-~~~Q~~~F~~~~~~l--~~-~~~~h~aNSa~~l~~~~~~~d~vR~Gi~lYG~~p 229 (382)
T 4a3q_A 154 IQQYEQLVFEGVFTHFACADEPGDM-TTEQYQRFKDMVNEA--IK-PEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYP 229 (382)
T ss_dssp HHHCTTEEEEEEECCC-------CH-HHHHHHHHHHHHTTS--CC-CSEEECCCHHHHHHCCCTTCSEECCCGGGGTCCS
T ss_pred HHhCCCceEEEEEEECcCCCCCCch-HHHHHHHHHHHHHhh--CC-CCcEEEEcChhhhcCcccCCCeEeecceeECCCc
Confidence 766 68999999999998753 333 667888888776643 12 1333444442 21 2344 6676654 334
Q ss_pred ch-------hhhccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCCCce
Q 037610 270 GR-------FFAASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGLTRT 336 (405)
Q Consensus 270 Gr-------~lv~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (405)
.. .-..|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++ .. + ..++
T Consensus 230 ~~~~~~~~~~~l~pv~~l~a~i~~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~--~R~~s~-~~-v----~i~G 301 (382)
T 4a3q_A 230 SEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGY--LRIMQG-SF-V----NVNG 301 (382)
T ss_dssp SHHHHHHCSSCCCCCEEEEEECCEEEC------------------CEEEEESCCGGGTC--CGGGTT-CE-E----EETT
T ss_pred ccccccccccCCceeEEEEEEEEEEEEcCCCCEEcCCCeEECCCCeEEEEEeecccccc--chhcCC-CE-E----EECC
Confidence 32 136899999999999998522 34565555555566788997776 466666 33 3 4578
Q ss_pred eeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC
Q 037610 337 YNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM 372 (405)
Q Consensus 337 ~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~ 372 (405)
++++|+|++|| |+++.|++- ++++||.|+|.+.
T Consensus 302 ~~~pivGrv~M--D~~~vDvt~-~~~~Gd~V~l~G~ 334 (382)
T 4a3q_A 302 HQCEVIGRVCM--DQTIVKVPD-QVKAGDSVILIDN 334 (382)
T ss_dssp EEEEBCSCCCS--SCEEEEECT-TCCTTCEEEEECS
T ss_pred EEEEEeeeeec--cEEEEECCC-CCCCCCEEEEEeC
Confidence 99999999999 999999875 8999999997765
No 34
>3hur_A Alanine racemase; structural genomics, isomerase, pyridoxal phosphate, PSI-2, protein structure initiative; 2.50A {Oenococcus oeni psu-1}
Probab=99.96 E-value=6.3e-30 Score=252.75 Aligned_cols=293 Identities=10% Similarity=0.063 Sum_probs=219.8
Q ss_pred cEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCC----cHHHHHHHHHc-CC-eEEEcCHHHHHHHHhCCCCCCcEEEcC
Q 037610 52 PFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNP----EPALLEALAAL-GS-NFDCGSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~----~~~vl~~l~~~-G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+..++|+++|++|++.+++.-+++++++++|||+ ..+|++.+.+. |+ +|.|++.+|+..++++|++.+ |++.|
T Consensus 10 ~~l~Idl~al~~N~~~l~~~~~~~~l~aVvKAnaYGHG~~~va~~l~~~~G~~~f~Va~~~Ea~~lr~aGi~~~-Ilvlg 88 (395)
T 3hur_A 10 TWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSNLDEALELRQADLTLP-IWVLG 88 (395)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTCSEEEEECCHHHHHTCHHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCCSC-EEESS
T ss_pred eEEEEeHHHHHHHHHHHHhcCCCCEEEEEECCCccCCCHHHHHHHHHhcCCCCEEEEeeHHHHHHHHhcCCCCC-EEEEc
Confidence 4566999999999999998755899999999974 68999999999 99 999999999999999999765 66667
Q ss_pred CCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhH-CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhh-HHHHHHHHHH-
Q 037610 126 PCKPVSHIKYAASVGVNLTTVDSVEELDKIRNW-HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQE-IMPLLKAAEA- 202 (405)
Q Consensus 126 p~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~-~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e-~~~~~~~~~~- 202 (405)
+. ++++++.++++++. .+|+|+++++.|.+. . ..+++|+|++++ +|+|+ .+++ +.++++.+++
T Consensus 89 ~~-~~~~~~~~~~~~l~-~~V~s~~~l~~l~~~~~-~~~V~lkvDtGm---------~R~G~--~~~e~~~~~~~~i~~~ 154 (395)
T 3hur_A 89 AW-DYSDLKLFIDHDIV-ITIPSLAWLQNLPDFEG-TLKVSLAIDTGM---------TRIGF--DKADEISAAKKIIDKN 154 (395)
T ss_dssp CC-CGGGHHHHHHTTEE-EEECCHHHHHTCCCCSS-CEEEEEEBCCSS---------CSSSB--CCHHHHHHHHHHHHHC
T ss_pred CC-CHHHHHHHHHcCCE-EEECCHHHHHHHHHhcC-CCcEEEEEcCCC---------CCcCC--ChHHHHHHHHHHHHhC
Confidence 75 67899999999984 899999999988765 2 445666665433 89999 7776 8888888766
Q ss_pred cCCeEEEEEEecCCCCC-CHH---HHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HH---H-Hh--CC--CCCcEEE-E
Q 037610 203 SGLSVVGVSFHVGSEAT-NFA---AFRGAIAAAKAVFDTAARTSNNKMRKLFKL--IF---R-EL--LP--GSSLKVI-S 267 (405)
Q Consensus 203 ~~l~l~Gih~H~gs~~~-~~~---~~~~~i~~~~~~~~~~~~~G~~~~~~li~~--~l---~-~~--~~--~~~~~l~-~ 267 (405)
+++++.|+++|+++... +.+ ...+|+++|.++.+.++ .. +.+.++.|| ++ + .+ ++ |+|+.++ .
T Consensus 155 ~~l~l~Gl~TH~a~ad~~~~~~~~~~~~Q~~~F~~~~~~l~-~~-~~~~h~aNSa~~l~~~~~~~~~~d~vR~Gi~LYG~ 232 (395)
T 3hur_A 155 PQLDLFSVYTHFATADEAGEKSKAYFEEQLRRWQELTINQG-FD-PSLFSMANSATCIWHHDDPRISFAAIRPGQLISGV 232 (395)
T ss_dssp TTEEEEEEECCCTTTTSCSHHHHHHHHHHHHHHHHHHTTSC-CC-GGGEECCCHHHHHHTTTCTTSCCSEECCCGGGGTC
T ss_pred CCceEEEEEEeCcCCCCCCCcchHHHHHHHHHHHHHHHhcc-CC-CCeEEEcCCHHHhcCcccccccCceEecChhhcCC
Confidence 68999999999998753 444 45678888888776443 11 122333344 22 1 23 55 6666654 2
Q ss_pred CCch------hh--hccceeEEEEEEEEEEeCC------eeEEEEecCCCCCChhhhhhccccccccCCCCCCCCccCCC
Q 037610 268 EPGR------FF--AASAFTLYAQIIGKRVRGE------LREYWINDGKFGSLAWVTCDEAIAKCTPLPFASSFTTSKGL 333 (405)
Q Consensus 268 EPGr------~l--v~~a~~l~t~V~~~k~~~~------~~~~~i~dg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (405)
.|.. .- +.|+++|.++|+.+|+... |.+|.....+..+..+++|.++. ++.+++ .. + .
T Consensus 233 ~p~~~~~~~~~~~~l~pv~~l~a~Ii~vk~v~~G~~vgYG~~~~a~~~~~ia~v~iGYaDG~--~R~ls~-~~-v----~ 304 (395)
T 3hur_A 233 NVSNGELKMPPNLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGW--LRRMQK-SS-V----I 304 (395)
T ss_dssp CTTTTSSCCCTTCCCCCCEEEEEECCEEEEECTTCBSSTTCSCBCSSSEEEEEESCCTTCGG--GGGEEE-EE-E----E
T ss_pred CCCccccccccccccceeEEEEEEEEEEEEeCCCCeEcCCCeEECCCCcEEEEEEecccccc--chhcCC-Ce-E----E
Confidence 3321 13 6899999999999998522 24444444444455667886665 355655 22 3 4
Q ss_pred CceeeEEEeccCcCCCCeeecCCCCCCCCCCCEEEEcCC
Q 037610 334 TRTYNSTVFGPTCDAFDEVFTGHKLPELEVNDWLVFSEM 372 (405)
Q Consensus 334 ~~~~~~~v~G~~C~~~D~l~~~~~lp~l~~GD~l~~~~~ 372 (405)
.++++++|+|++|| |+++.|++- ++++||.|+|.+.
T Consensus 305 i~G~~~pivGrv~M--D~~~vDvt~-~~~~GD~V~l~G~ 340 (395)
T 3hur_A 305 INGKRMPIIGRITM--DQTMVKLDR-KYPIGTRVTLIGK 340 (395)
T ss_dssp ETTEEEEBCSCCCS--SCEEEECSS-CCCTTCEEEEEES
T ss_pred ECCEEEEEECceec--cEEEEECCC-CCCCCCEEEEEcC
Confidence 57899999999999 999999975 8999999987664
No 35
>3anu_A D-serine dehydratase; PLP-dependent fold-type III enzyme, PL binding, zinc binding, lyase; HET: PLP; 1.90A {Gallus gallus} PDB: 3anv_A* 3awn_A* 3awo_A*
Probab=99.95 E-value=1.1e-26 Score=229.81 Aligned_cols=236 Identities=14% Similarity=0.110 Sum_probs=178.9
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEE
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~ 123 (405)
+++| |+++||+++|++|++++++.++ +++++|++|||++++|++.+.+.|+ +|+|+|.+|++.++++|++ +|++
T Consensus 9 ~~~t-P~~~idl~~l~~N~~~l~~~~~~~~~~l~~~vKa~~~~~i~~~l~~~G~~~~~vas~~Ea~~~~~~G~~--~ii~ 85 (376)
T 3anu_A 9 TLPT-PALTIDRTTARRNAERMRERCRALGVRLRPHVKTHKTLEGGLLATGGTRRGIAVSTLAEARFFADGGFD--DILL 85 (376)
T ss_dssp GSCS-SEEEEEHHHHHHHHHHHHHHHHHHTCEECCBCTTTCCHHHHHHHTTTCCEEEEESSHHHHHHHHHTTCE--EEEE
T ss_pred cCCC-ceEEEeHHHHHHHHHHHHHHHHHcCCcEEEEEhhhcCHHHHHHHHHCCCCeEEEccHHHHHHHHHCCCC--eEEE
Confidence 5789 9999999999999999999886 8999999999999999999999998 9999999999999999996 4554
Q ss_pred cCCCCCHHHHHHHHH-----cCCcEEEecCHHHHHHHHhHCC----CCeEEEEEecCCCCCCCCCCCCCCCCCCChhh--
Q 037610 124 ANPCKPVSHIKYAAS-----VGVNLTTVDSVEELDKIRNWHP----KSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQE-- 192 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~-----~gv~~i~vds~~el~~i~~~~~----~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e-- 192 (405)
..+.+ +++++++++ .++ .++|||.+++++|.+.++ ..++.|+|++++ +|||+ ++++
T Consensus 86 ~~~~~-~~~l~~~~~l~~~~~~i-~~~vds~~~l~~l~~~a~~~~~~~~V~l~vd~g~---------~R~G~--~~~~~~ 152 (376)
T 3anu_A 86 AYPVP-TARLEECAGLARRLDAF-HVLLDRPEALASLRQRPLGHGKRWLVWLKLDCGN---------GRAGV--RPTDPA 152 (376)
T ss_dssp EEECC-GGGHHHHHHHHHHSSCE-EEEECCHHHHHHHHTSCCCTTCCEEEEEEECCC-----------CSSB--CTTSHH
T ss_pred ECCCc-HHHHHHHHHHHhcCCcE-EEEeCCHHHHHHHHHHHHhCCCceEEEEEECCCC---------CcCCC--CCCchh
Confidence 44446 889999998 888 489999999999997653 356788887643 89999 7777
Q ss_pred HHHHHHHHHHc---CCeEEEEEEecCC-CC-CCHH---HHH-HHHHHHHHHHHHHHhCCCCchhHH--HHH-H-HH----
Q 037610 193 IMPLLKAAEAS---GLSVVGVSFHVGS-EA-TNFA---AFR-GAIAAAKAVFDTAARTSNNKMRKL--FKL-I-FR---- 255 (405)
Q Consensus 193 ~~~~~~~~~~~---~l~l~Gih~H~gs-~~-~~~~---~~~-~~i~~~~~~~~~~~~~G~~~~~~l--i~~-~-l~---- 255 (405)
+.++++.++++ ++++.|||+|.|+ .. .+.. .+. ++++.+.++.+.+++.|+ +++.+ -++ . +.
T Consensus 153 ~~~l~~~i~~~~~~~l~l~Gl~~h~g~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~vs~Ggs~~~~~~~~~ 231 (376)
T 3anu_A 153 ALELAQAIANDAPEEVTLVGVYAHCGNTYGCSGADTIQAIARTTTNAVLSFVAALRQAGV-PCPQASIGSTPSCSHPIPE 231 (376)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEEECCGGGC-CCSHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCEEEECCHHHHHSCCGG
T ss_pred HHHHHHHHhCCCCCceEEEEEEeeCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCEEEEccCHHHhhhhhh
Confidence 88888887667 8999999999987 32 3432 343 478888888888887775 44332 111 1 11
Q ss_pred -HhCC--CCCcEEE-----ECCc-hhhhccceeEEEEEEEEEEeCCeeEEEEecCC
Q 037610 256 -ELLP--GSSLKVI-----SEPG-RFFAASAFTLYAQIIGKRVRGELREYWINDGK 302 (405)
Q Consensus 256 -~~~~--~~~~~l~-----~EPG-r~lv~~a~~l~t~V~~~k~~~~~~~~~i~dg~ 302 (405)
..++ ++|..++ .++| |+.+++|++++|+|+++|.. ..+.+.||+
T Consensus 232 ~~~~~~vr~G~~l~~~~~~~~~~~~~~~~~a~~l~a~Vi~vk~~---~g~~v~dgG 284 (376)
T 3anu_A 232 MSQLTELHPGNYIFYDLQQTQLGSCQPQDVAIRVLTRVIGHYAH---RGQLLVDCG 284 (376)
T ss_dssp GGGSSEECCCGGGTCCHHHHHHTSSCGGGCCEEEEEEEEEEETT---TTEEEESCC
T ss_pred cCCceEeccceEEEeccccccccCCCcCceEEEEEEEEEeeeCC---CCeEEEeCC
Confidence 1222 3333322 1334 45679999999999999873 235555654
No 36
>3llx_A Predicted amino acid aldolase or racemase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: LLP TRS; 1.50A {Idiomarina loihiensis}
Probab=99.91 E-value=1.7e-23 Score=206.90 Aligned_cols=222 Identities=15% Similarity=0.141 Sum_probs=168.6
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEE
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~ 123 (405)
+++| |++++|+++|++|++.+++.++ ++++++++||+..++|++.+.+.|+ +|.|++++|++.++++|++. .|+.
T Consensus 11 ~~~t-P~~~idl~al~~N~~~l~~~~~~~~~~l~~vvKah~~~~va~~l~~~G~~~~~va~~~Ea~~l~~~Gi~~-~il~ 88 (376)
T 3llx_A 11 HPDT-PYLLIDEAKLKSNINYLKQRVESLGSHLRPHLKTLRTLEAAGYLLDSKSAPATVSTLAEAEAYAKAGYTD-LLYA 88 (376)
T ss_dssp SSCS-SEEEEEHHHHHHHHHHHHHHHHHTTCCBCCBCTTTCBHHHHHHHCSSTTSCEEESSHHHHHHHHHTTCCE-EEEE
T ss_pred hCCC-cEEEEcHHHHHHHHHHHHHHHHhCCCeEEEEecccCCHHHHHHHHhcCCCcEEEecHHHHHHHHhCCCCc-EEEe
Confidence 6889 9999999999999999999885 8999999999999999999999999 99999999999999999963 3444
Q ss_pred cCCCCCHHHHHHHH-----HcCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhh--
Q 037610 124 ANPCKPVSHIKYAA-----SVGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQE-- 192 (405)
Q Consensus 124 ~gp~k~~~~l~~a~-----~~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e-- 192 (405)
.+. . +++++.++ +.++ .++|||.++++.|.+. .+..++.|+|++++ +|+|+ .+++
T Consensus 89 ~~~-~-~~~~~~~~~l~~~~~~l-~~~Vds~~~l~~l~~~a~~~~~~~~V~l~vdtG~---------~R~G~--~~~~~~ 154 (376)
T 3llx_A 89 VGI-A-PAKLKRVAALRQQGINL-HILLDNITQAQAVVDYAAEFGQDFSVFIEIDSDD---------HRGGI--KPSDSK 154 (376)
T ss_dssp EEC-C-GGGHHHHHHHHHTTCEE-EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCSSS---------SSSCB--CTTCTH
T ss_pred CCC-C-HHHHHHHHHhhccCCeE-EEEECCHHHHHHHHHHHHhcCCceEEEEEECCCC---------CCCCC--CCchHH
Confidence 444 3 68888887 4566 4799999999999864 45678888887654 79999 7765
Q ss_pred HHHHHHHHHHcCCeEEEEEEecCCCCC-C-H----HHHHHHHHHHHHHHHHHHhCCCCchhHH--HHH-HHHHhCCCCCc
Q 037610 193 IMPLLKAAEASGLSVVGVSFHVGSEAT-N-F----AAFRGAIAAAKAVFDTAARTSNNKMRKL--FKL-IFRELLPGSSL 263 (405)
Q Consensus 193 ~~~~~~~~~~~~l~l~Gih~H~gs~~~-~-~----~~~~~~i~~~~~~~~~~~~~G~~~~~~l--i~~-~l~~~~~~~~~ 263 (405)
+.++++.+ ++++.||++|+|+... + . ..+.++++.+.++.+.+++.|+ ++..+ -++ .+. +.+...-
T Consensus 155 l~~~~~~l---~l~l~Gl~th~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~l~~~g~-~~~~vs~g~S~~~~-~~~~~~~ 229 (376)
T 3llx_A 155 LLTIAKTL---GEHFTGLMTHAGGSYACNTEQGLKNFAKQECDAVRIARNNLETAGI-HCAITSVGSTPTAH-FGEDFSD 229 (376)
T ss_dssp HHHHHHHH---GGGEEEEECCCGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCEEEECCHHHHH-HCSCCTT
T ss_pred HHHHHHHh---CCEEeEEEEecccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCEEEEcCChhhh-hhhhcCC
Confidence 66666655 8999999999998642 2 2 2356788888888888887774 33332 122 121 1221101
Q ss_pred EEEECCchhh--------------hccceeEEEEEEEEEE
Q 037610 264 KVISEPGRFF--------------AASAFTLYAQIIGKRV 289 (405)
Q Consensus 264 ~l~~EPGr~l--------------v~~a~~l~t~V~~~k~ 289 (405)
.-.+.||.++ ..+|+++.++|++++.
T Consensus 230 ~~~vR~G~~lyg~~~~~~~~~~~~~~pa~~l~a~Vis~~~ 269 (376)
T 3llx_A 230 ISEVRAGVYTTFDLVMKNIGVCDFSHIAMSVVTTVIGHNK 269 (376)
T ss_dssp CSEECCCGGGTCCHHHHHHTSCCGGGCCEEEEEEEEEEET
T ss_pred ccEeccceEEeccHhHhhcCCCCcCCeeEEEEEEEEeeeC
Confidence 1134555442 3579999999999987
No 37
>3gwq_A D-serine deaminase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=99.90 E-value=3.3e-22 Score=200.41 Aligned_cols=181 Identities=17% Similarity=0.213 Sum_probs=154.8
Q ss_pred CCCCccEEEEeHHHHHHHHHHHHHhCC--CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEE
Q 037610 47 EFDEVPFYLMDLGVVVSLYNHMISNLP--MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 47 ~~~t~P~~v~d~~~l~~n~~~~~~~~~--~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~ 123 (405)
+++| |+++||+++|++|++.+++.++ +++++|++|||..++|++.+.+.|+ +|+|+|.+|++.++++|+ ++|++
T Consensus 43 ~~~t-P~~viDl~al~~N~~~l~~~~~~~gv~l~~vvKah~~~~va~~l~~~G~~g~~vas~~Ea~~l~~~Gi--~~ill 119 (426)
T 3gwq_A 43 DVSL-PAAVLYADRVEHNLKWMQAFVAEYGVKLAPHGKTTMAPQLFRRQLETGAWGITLATAHQVRAAYHGGV--SRVLM 119 (426)
T ss_dssp CBCS-SEEEEEHHHHHHHHHHHHHHHHHHCCEECCBCTTTCCHHHHHHHHHTTCCCEEESSHHHHHHHHHTTC--CEEEE
T ss_pred cCCC-CeEEEeHHHHHHHHHHHHHHHhhcCCEEEEEEccCCCHHHHHHHHHCCCCeEEEeCHHHHHHHHHCCC--CeEEE
Confidence 6899 9999999999999999999884 7999999999999999999999998 999999999999999998 46899
Q ss_pred cCCCCCHHHHHHHHHc----CCc-EEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhH
Q 037610 124 ANPCKPVSHIKYAASV----GVN-LTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEI 193 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~----gv~-~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~ 193 (405)
.++...+++++.+++. ++. .++|||+++++.|.+. .+..++.|+|++++ +|+|+ .+ +++
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~~l~~~Vds~~~l~~L~~~a~~~~~~~~V~l~VdtG~---------~R~Gv--~~~~e~ 188 (426)
T 3gwq_A 120 ANQLVGRRNMMMVAELLSDPEFEFFCLVDSVEGVEQLGEFFKSVNKQLQVLLELGVPG---------GRTGV--RDAAQR 188 (426)
T ss_dssp CSCCCSHHHHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCCEEEEEEECCTT---------SSSSB--CSHHHH
T ss_pred ECCcCCHHHHHHHHHHhhcCCccEEEEeCCHHHHHHHHHHHHHCCCeeEEEEEeCCCC---------CcCCC--CCHHHH
Confidence 8888778888877542 332 4789999999999875 34578888888643 79999 74 889
Q ss_pred HHHHHHHHH-c-CCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 037610 194 MPLLKAAEA-S-GLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 194 ~~~~~~~~~-~-~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G 242 (405)
.++++.+++ + ++++.|||+|.|+. .+.+.+.++++++.++++.+++.|
T Consensus 189 ~~l~~~i~~~~~~l~l~Gl~th~g~~-~~~~~~~~~~~~l~~l~~~L~~~g 238 (426)
T 3gwq_A 189 NAVLEAITRYPDTLKLAGVELYEGVL-KEEHEVREFLQSAVAVTRELVEQE 238 (426)
T ss_dssp HHHHHHHHTSTTTEEEEEEEECGGGC-CSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCEEEEeEEEEcccc-CCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999988776 5 89999999999986 466677788888888888887655
No 38
>3cpg_A Uncharacterized protein; unknown protein, TIM barrel, monomer, structural genomics, PSI-2, protein structure initiative; 1.71A {Bifidobacterium adolescentis ATCC15703}
Probab=99.80 E-value=1.3e-18 Score=165.14 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=140.2
Q ss_pred EEeHHHHHHHHHHHHHhCC----CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhC---------------
Q 037610 55 LMDLGVVVSLYNHMISNLP----MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLL--------------- 114 (405)
Q Consensus 55 v~d~~~l~~n~~~~~~~~~----~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~--------------- 114 (405)
.+|+++|++|++.+++..+ +++++|++|+++...|++. .+.|+ +|+|++.+|+..++++
T Consensus 26 ~idl~ai~~Ni~~~~~~~~~~~~~~~l~avvK~hg~~~va~~-~~~G~~~f~va~~~Ea~~lr~~l~~~~~~~g~~~~~~ 104 (282)
T 3cpg_A 26 TDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIGEIMAA-IDAGVRMIGENRPQEVTAKAEGLARRCAERGFSLGVA 104 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTSSEEEEECTTCCHHHHHHH-HHTTCCCEEESCHHHHHHHHHHHHHHHHHTTEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCCHHHHHHH-HHCCCCEEEEEeHHHHHHHHHhhhhhccccccccccc
Confidence 4789999999999998873 6899999999999999998 68898 8999999999999988
Q ss_pred CCC----CCcEEE--cCCCCCHHHHHHHHH-cCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCC
Q 037610 115 DVS----PDRIIY--ANPCKPVSHIKYAAS-VGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSK 183 (405)
Q Consensus 115 G~~----~~~Ii~--~gp~k~~~~l~~a~~-~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~sr 183 (405)
|++ ++.|.+ .|+.+ .++++.+++ .++ .++|||+++++.|.+. .+..++.||||+++.. +|
T Consensus 105 G~~~d~~~~~i~~~~iG~~~-~~~~~~~~~~~~l-~~~Vds~~~l~~L~~~a~~~~~~~~V~lkVdtGme~-------~R 175 (282)
T 3cpg_A 105 GAAPDAAAEHIPFHLIGQLQ-SNKIGKVLPVVDT-IESVDSIDLAEKISRRAVARGITVGVLLEVNESGEE-------SK 175 (282)
T ss_dssp ------CCEEECEEECSCCC-GGGHHHHTTTCSE-EEEECCHHHHHHHHHHHHHHTCCEEEEEEBCCSSCT-------TS
T ss_pred cccccccccceeeeecChhH-HHHHHHHHHhCCE-EEEeCCHHHHHHHHHHHHhcCCCceEEEEEECCCCC-------CC
Confidence 774 444554 47764 456888887 787 5899999999999864 4567899999987542 89
Q ss_pred CCCCCChhhHHHHHHHHHH-cCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 037610 184 YGAGHHPQEIMPLLKAAEA-SGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAAR 240 (405)
Q Consensus 184 fGi~~~~~e~~~~~~~~~~-~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~ 240 (405)
||+ +++++.++++.++. +++++.|||+|++++. +.+.+.++++++.++.+.+++
T Consensus 176 ~G~--~~ee~~~l~~~i~~~~~l~l~Gl~th~~~~~-~~~~~~~~~~~l~~~~~~l~~ 230 (282)
T 3cpg_A 176 SGC--DPAHAIRIAQKIGTLDGIELQGLMTIGAHVH-DETVIRRGFSHLRKTRDLILA 230 (282)
T ss_dssp SSB--CGGGHHHHHHHHHTCTTEEEEEEECCCCCSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCc--CHHHHHHHHHHHHhCCCceEEeEEEECCCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 999 99999999998876 5899999999999875 555555667777777766654
No 39
>3sy1_A UPF0001 protein YGGS; engineered protein, structural genomics, PSI-biology, protei structure initiative; HET: MES; 1.47A {Escherichia coli} PDB: 1w8g_A*
Probab=99.53 E-value=3.3e-13 Score=124.89 Aligned_cols=156 Identities=17% Similarity=0.167 Sum_probs=123.5
Q ss_pred CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCC---CC-cEEEcCCCCCHHHHHHHH-HcCCcEEEec
Q 037610 74 MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVS---PD-RIIYANPCKPVSHIKYAA-SVGVNLTTVD 147 (405)
Q Consensus 74 ~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~---~~-~Ii~~gp~k~~~~l~~a~-~~gv~~i~vd 147 (405)
+++++.++|+.+.. .++.+.+.|+ .|.++..+|+...++.+.. |+ ...|.|+. ..+.++.++ ..++ +.+||
T Consensus 29 ~v~l~AV~Kahg~~-~i~~~~~~G~~~fgen~vqEa~~kr~~~~~~~~~~i~w~~iG~l-q~nk~~~~~~~~~~-i~sVd 105 (245)
T 3sy1_A 29 EITLVAVSKTKPAS-AIAEAIDAGQRQFSEHYVQEGVDKIRHFQELGVTGLEWNFAGPL-QSNKSRLVAEHFDW-CITID 105 (245)
T ss_dssp GCEEEEECTTCCHH-HHHHHHHTTCCEEEESSHHHHHHHHHHHHHHTCCSCEEEECSCC-CGGGHHHHHHHCSE-EEEEC
T ss_pred CcEEEEEECCCCHH-HHHHHHHcCCCEEEEecHHHHHHHHHhhhhccCCCeEEeecCCC-ChHHHHHHHHHCCE-EEecC
Confidence 68999999998854 4678889999 9999999999988877543 22 23677886 456777776 4776 47999
Q ss_pred CHHHHHHHHhHCC----CCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-cCCeEEEEEEecCCCCCCHH
Q 037610 148 SVEELDKIRNWHP----KSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEA-SGLSVVGVSFHVGSEATNFA 222 (405)
Q Consensus 148 s~~el~~i~~~~~----~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~-~~l~l~Gih~H~gs~~~~~~ 222 (405)
|+++++.|++.++ ..++.|+||++.+ .+|||+ +++++.++++.+.. +++++.||++|.+. ..+++
T Consensus 106 s~~~a~~l~~~a~~~~~~~~V~lqVntG~e-------~~R~G~--~~ee~~~l~~~i~~~~~l~l~Glmt~~~~-~~d~~ 175 (245)
T 3sy1_A 106 RLRIATRLNDQRPAELPPLNVLIQINISDE-------NSKSGI--QLAELDELAAAVAELPRLRLRGLSAIPAP-ESEYV 175 (245)
T ss_dssp CHHHHHHHHHHSCTTSCCEEEEEEBCCSCT-------TCCSSB--CGGGHHHHHHHHTTCTTEEEEEEECCCCC-CSCHH
T ss_pred CHHHHHHHHHHHHHcCCCceEEEEEECCCC-------cCCcCC--CHHHHHHHHHHHHcCCCCeEEEEEEeCCC-CCCHH
Confidence 9999999998754 4678888886532 189999 89999999988766 58999999998755 45777
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 037610 223 AFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 223 ~~~~~i~~~~~~~~~~~~~G 242 (405)
.+...++++.++.+.+++.+
T Consensus 176 ~~~~~f~~l~~l~~~l~~~~ 195 (245)
T 3sy1_A 176 RQFEVARQMAVAFAGLKTRY 195 (245)
T ss_dssp HHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 78888888888888887654
No 40
>1ct5_A Protein (yeast hypothetical protein, selenoMet); TIM barrel, pyridoxal-5'-phosphate, selenomethionine, structural genomics, PSI; HET: PLP; 2.00A {Saccharomyces cerevisiae} SCOP: c.1.6.2 PDB: 1b54_A*
Probab=99.49 E-value=5.5e-13 Score=124.31 Aligned_cols=169 Identities=15% Similarity=0.119 Sum_probs=124.8
Q ss_pred eHHHHHHHHHHHHHhC-----C-CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEEEc--CCC
Q 037610 57 DLGVVVSLYNHMISNL-----P-MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRIIYA--NPC 127 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~-----~-~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii~~--gp~ 127 (405)
|++.|++|+++..+.. | +++++.++|+.+...|. .+.+.|+ +|.|++..|+...+++ ++.+ |.+. |+.
T Consensus 17 nl~~v~~~i~~~~~~~~r~~~~~~v~l~aVvK~hg~~~i~-~~~~aG~~~fgva~vqEa~~~r~~-~~~~-l~~h~iG~l 93 (256)
T 1ct5_A 17 QYESVREVVNAEAKNVHVNENASKILLLVVSKLKPASDIQ-ILYDHGVREFGENYVQELIEKAKL-LPDD-IKWHFIGGL 93 (256)
T ss_dssp HHHHHHHHHHHHHHTC-------CCEEEEECTTSCHHHHH-HHHHHTCCEEEECCHHHHHHHHHH-SCTT-CEEEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCEEEEEECCCCHHHHH-HHHHcCCCEEEEEcHHHHHHHHHh-cccC-eeEeecCCC
Confidence 4678888888887766 4 68999999999987776 5888999 9999999999999988 6543 6665 764
Q ss_pred CCHHHHHHH--H-HcCCcEEEecCHHHHHHHHhH----CC---CCeEEEEEecCCCCCCCCCCCCCCCCCCCh-hhHHHH
Q 037610 128 KPVSHIKYA--A-SVGVNLTTVDSVEELDKIRNW----HP---KSDLLIRIKSPDDSGAKYPLDSKYGAGHHP-QEIMPL 196 (405)
Q Consensus 128 k~~~~l~~a--~-~~gv~~i~vds~~el~~i~~~----~~---~~~v~lRi~~~~~~~~~~~~~srfGi~~~~-~e~~~~ 196 (405)
..+.++.+ + +.++ ..+|||++.++.|.+. .+ ..+++|.||++.+. +|+|+ .+ +++.++
T Consensus 94 -q~nk~~~~~~~~~~~l-~~sVds~~~a~~l~~~a~~~~~~~~~l~V~lqVdtG~e~-------~R~G~--~~~~e~~~l 162 (256)
T 1ct5_A 94 -QTNKCKDLAKVPNLYS-VETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHED-------QKSGL--NNEAEIFEV 162 (256)
T ss_dssp -CGGGHHHHHHCTTEEE-EEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSSC-------CSSSB--CCHHHHHHH
T ss_pred -CHHHHHHHhcccccCE-EEEECCHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCC-------CCcCc--CchHHHHHH
Confidence 34567777 4 5666 5799999999998864 34 46788888765321 89999 88 899999
Q ss_pred HHHHH--H-cCCeEEEEEEec--CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 037610 197 LKAAE--A-SGLSVVGVSFHV--GSEATNFAAFRGAIAAAKAVFDTAAR 240 (405)
Q Consensus 197 ~~~~~--~-~~l~l~Gih~H~--gs~~~~~~~~~~~i~~~~~~~~~~~~ 240 (405)
++.+. . +++++.||++|+ +... +.+....+++++.++.+.+++
T Consensus 163 ~~~i~~~~~~~L~l~Glmth~~~~~ad-~~~~~~~~f~~~~~~~~~l~~ 210 (256)
T 1ct5_A 163 IDFFLSEECKYIKLNGLMTIGSWNVSH-EDSKENRDFATLVEWKKKIDA 210 (256)
T ss_dssp HHHHHSTTCCSEEEEEEECCCCCC----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCeeEEEEEEECCcCCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence 99887 6 589999999999 5542 233344566677666666644
No 41
>3r79_A Uncharacterized protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium, TIM barrel; HET: PLP; 1.90A {Agrobacterium tumefaciens}
Probab=99.39 E-value=1.3e-11 Score=113.78 Aligned_cols=164 Identities=13% Similarity=0.098 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHhC---C-CCceeeeeccCCcHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCC--CC-cEEEcCCCCCH
Q 037610 59 GVVVSLYNHMISNL---P-MIHPHYAVKCNPEPALLEALAALGS-NFDCGSRSEIEAVLLLDVS--PD-RIIYANPCKPV 130 (405)
Q Consensus 59 ~~l~~n~~~~~~~~---~-~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~--~~-~Ii~~gp~k~~ 130 (405)
..|++++++..+.. | +++++.++|+.+... ++.+.+.|+ .|.++..+|+...++.+.. ++ ...+.|+. ..
T Consensus 11 ~~v~~~i~~a~~~~~r~~~~v~l~AVvKahga~~-i~~~~~~G~~~fgen~vqEa~~kr~~~~~~~~~i~wh~iG~l-q~ 88 (244)
T 3r79_A 11 EDVRQRIADVAEKSGRKAADVALVAVSKTFDAEA-IQPVIDAGQRVFGENRVQEAQGKWPALKEKTSDIELHLIGPL-QS 88 (244)
T ss_dssp HHHHHHHHHHHHHTTCCGGGSEEEEECTTCCHHH-HHHHHHTTCCEEEESCHHHHHHHHHHHHHHSTTCEEEECSCC-CG
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEECCcCHHH-HHHHHHCCCCEEEEeeHHHHHHHHHhccccCCCeEEEecCCC-CH
Confidence 34455554443333 2 689999999988755 578889999 9999999999988887542 22 23677886 46
Q ss_pred HHHHHHHH-cCCcEEEecCHHHHHHHHhH----CCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH-cC
Q 037610 131 SHIKYAAS-VGVNLTTVDSVEELDKIRNW----HPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEA-SG 204 (405)
Q Consensus 131 ~~l~~a~~-~gv~~i~vds~~el~~i~~~----~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~-~~ 204 (405)
+.++.+++ .++ +.+|||++.++.|++. .+..+++|+||++.+. +|+|+ .++++.++++.+.. ++
T Consensus 89 nk~~~~v~~~~~-i~sVds~~~a~~L~~~a~~~g~~~~V~LqVdtG~e~-------~R~Gv--~~ee~~~l~~~i~~l~~ 158 (244)
T 3r79_A 89 NKAADAVALFDV-VESIDREKIARALSEECARQGRSLRFYVQVNTGLEP-------QKAGI--DPRETVAFVAFCRDELK 158 (244)
T ss_dssp GGHHHHHHHCSE-EEEECSHHHHHHHHHHHHHHTCCCEEEEEBCTTCCT-------TSCSB--CHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHCCE-EEeeCCHHHHHHHHHHHHHcCCCceEEEEEECCCCc-------CCCCC--CHHHHHHHHHHHHcCCC
Confidence 67888885 676 4799999999988864 4678899999876322 89999 99999999998766 69
Q ss_pred CeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Q 037610 205 LSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTA 238 (405)
Q Consensus 205 l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~ 238 (405)
+++.||++|++... +++ .+++.+.++.+.+
T Consensus 159 L~l~GlmTh~a~~d-d~~---~~f~~l~~l~~~l 188 (244)
T 3r79_A 159 LPVEGLMCIPPAEE-NPG---PHFALLAKLAGQC 188 (244)
T ss_dssp CCCCEEECCCCTTS-CSH---HHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCC-CHH---HHHHHHHHHHHhC
Confidence 99999999997753 333 3344444554443
No 42
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=81.81 E-value=14 Score=32.71 Aligned_cols=102 Identities=9% Similarity=0.075 Sum_probs=48.3
Q ss_pred cHHHHHHHHHhhcCCCCCccEEEEeHHH--HHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcC--HHH-
Q 037610 33 ELTEFMQSTILKRQEFDEVPFYLMDLGV--VVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGS--RSE- 107 (405)
Q Consensus 33 ~~~~~~~~~~~~~~~~~t~P~~v~d~~~--l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS--~~E- 107 (405)
+..++++.++. .|= +++.+.+.. -.+.++++++.+|+..+-+-.-. ...=++.+.+.|+.|-++. -.|
T Consensus 30 ~~~~~~~al~~----gGv-~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl--~~d~~~~A~~aGAd~v~~p~~d~~v 102 (224)
T 1vhc_A 30 DILPLADTLAK----NGL-SVAEITFRSEAAADAIRLLRANRPDFLIAAGTVL--TAEQVVLAKSSGADFVVTPGLNPKI 102 (224)
T ss_dssp GHHHHHHHHHH----TTC-CEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCC--SHHHHHHHHHHTCSEEECSSCCHHH
T ss_pred HHHHHHHHHHH----cCC-CEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEe--eHHHHHHHHHCCCCEEEECCCCHHH
Confidence 34445555543 233 444444321 23455556666664433332211 2344555666666433422 123
Q ss_pred HHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEe
Q 037610 108 IEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTV 146 (405)
Q Consensus 108 ~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~v 146 (405)
++.+++.|.+ ++ -| +.+++|+..|.+.|+.++-+
T Consensus 103 ~~~ar~~g~~---~i-~G-v~t~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 103 VKLCQDLNFP---IT-PG-VNNPMAIEIALEMGISAVKF 136 (224)
T ss_dssp HHHHHHTTCC---EE-CE-ECSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCC---EE-ec-cCCHHHHHHHHHCCCCEEEE
Confidence 4555665542 22 23 45677777777777664433
No 43
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.35 E-value=23 Score=30.43 Aligned_cols=96 Identities=9% Similarity=0.045 Sum_probs=62.2
Q ss_pred HHHHHHHHhCCCCceeeeeccCCcH-HHHHHHHHcCC-eEEEcCH------HHH-HHHHhCCCCCCcEE--EcCCCCCHH
Q 037610 63 SLYNHMISNLPMIHPHYAVKCNPEP-ALLEALAALGS-NFDCGSR------SEI-EAVLLLDVSPDRII--YANPCKPVS 131 (405)
Q Consensus 63 ~n~~~~~~~~~~~~i~yavKaN~~~-~vl~~l~~~G~-g~~vaS~------~E~-~~a~~~G~~~~~Ii--~~gp~k~~~ 131 (405)
+.++++++.+++..+++-.|....+ .+++.+.+.|+ ++-+... .++ +.+++.|. +++ +.+|.-..+
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~t~~~ 118 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK---QVVVDMICVDDLPA 118 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC---EEEEECTTCSSHHH
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC---eEEEEecCCCCHHH
Confidence 5577788777777777778886644 45899999998 6655432 232 33455665 234 345543347
Q ss_pred HHHHHHHcCCcEEEec-----------CHHHHHHHHhHCCC
Q 037610 132 HIKYAASVGVNLTTVD-----------SVEELDKIRNWHPK 161 (405)
Q Consensus 132 ~l~~a~~~gv~~i~vd-----------s~~el~~i~~~~~~ 161 (405)
.++.+.+.|+..+.++ +.+.++++.+..++
T Consensus 119 ~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~ 159 (211)
T 3f4w_A 119 RVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRK 159 (211)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSS
T ss_pred HHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCC
Confidence 7889999998866653 45667777665443
No 44
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.18 E-value=12 Score=34.57 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=12.8
Q ss_pred ChhhHHHHHHHHHHc-C-CeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEAS-G-LSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~-~-l~l~Gih~H~gs~ 217 (405)
.+++..++++.+++. . +. .++|+|-.++
T Consensus 182 ~P~~~~~lv~~l~~~~~~~~-l~~H~Hn~~G 211 (295)
T 1ydn_A 182 TPDTVAAMLDAVLAIAPAHS-LAGHYHDTGG 211 (295)
T ss_dssp CHHHHHHHHHHHHTTSCGGG-EEEEEBCTTS
T ss_pred CHHHHHHHHHHHHHhCCCCe-EEEEECCCcc
Confidence 455555555554432 1 21 3455555443
No 45
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.29 E-value=17 Score=34.32 Aligned_cols=29 Identities=21% Similarity=0.149 Sum_probs=20.1
Q ss_pred ChhhHHHHHHHHHHcC--CeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEASG--LSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~~--l~l~Gih~H~gs~ 217 (405)
.++++.++++.+++.- -...++|+|--.+
T Consensus 176 ~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G 206 (345)
T 1nvm_A 176 SMNDIRDRMRAFKAVLKPETQVGMHAHHNLS 206 (345)
T ss_dssp CHHHHHHHHHHHHHHSCTTSEEEEECBCTTS
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEEECCCcc
Confidence 6788888888877631 2357888886554
No 46
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.04 E-value=15 Score=34.09 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=13.4
Q ss_pred CHHHHHHHHHcCCcEEEe-cCH
Q 037610 129 PVSHIKYAASVGVNLTTV-DSV 149 (405)
Q Consensus 129 ~~~~l~~a~~~gv~~i~v-ds~ 149 (405)
+.+.++.|++.|+..+.+ ++.
T Consensus 85 ~~~~i~~a~~aG~~~v~i~~~~ 106 (302)
T 2ftp_A 85 NLKGFEAALESGVKEVAVFAAA 106 (302)
T ss_dssp SHHHHHHHHHTTCCEEEEEEES
T ss_pred CHHHHHHHHhCCcCEEEEEEec
Confidence 567777777777765554 443
No 47
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=74.45 E-value=34 Score=30.42 Aligned_cols=101 Identities=11% Similarity=0.086 Sum_probs=64.7
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc-----CHHHHHHHHhCCCCCCcE
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG-----SRSEIEAVLLLDVSPDRI 121 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va-----S~~E~~~a~~~G~~~~~I 121 (405)
... .+.+.+.+ ...++++++..|++.+.|-+..... ..+.+.+.|+ ++.+. +..-++.+.+.|+ .-.
T Consensus 126 ~~~-~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G~--~v~ 198 (248)
T 1zcc_A 126 MVR-DTFYFSFS--EEMRQGLQSIAPEFRRMMTLDIAKS--PSLVGAVHHASIIEITPAQMRRPGIIEASRKAGL--EIM 198 (248)
T ss_dssp CST-TEEEECSC--HHHHHHHHHHCTTSEEEEEHHHHSS--THHHHHTTCCSEEEECHHHHHSHHHHHHHHHHTC--EEE
T ss_pred CCC-CEEEEECC--HHHHHHHHHHCCCCcEEEEecCCcc--HHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCCC--EEE
Confidence 345 56664322 1234566777787777666544332 3345556676 44442 5566677888887 224
Q ss_pred EEcCCCCCHHHHHH-HHHcCCcEEEecCHHHHHHHHh
Q 037610 122 IYANPCKPVSHIKY-AASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 122 i~~gp~k~~~~l~~-a~~~gv~~i~vds~~el~~i~~ 157 (405)
.++ ..++++++. +++.|+.-|..|..+.+..+.+
T Consensus 199 ~wT--vn~~~~~~~~l~~~GvdgIiTD~p~~~~~~~~ 233 (248)
T 1zcc_A 199 VYY--GGDDMAVHREIATSDVDYINLDRPDLFAAVRS 233 (248)
T ss_dssp EEC--CCCCHHHHHHHHHSSCSEEEESCHHHHHHHHH
T ss_pred EEC--CCCHHHHHHHHHHcCCCEEEECCHHHHHHHHH
Confidence 444 346789999 9999998888999999887654
No 48
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=68.97 E-value=71 Score=29.34 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=66.5
Q ss_pred CCCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCc--------------------HHHHHHHHHcCC-eEEE----
Q 037610 48 FDEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPE--------------------PALLEALAALGS-NFDC---- 102 (405)
Q Consensus 48 ~~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~--------------------~~vl~~l~~~G~-g~~v---- 102 (405)
... .+++.+.+ .+.++++++..|++.+.|-+..... ..+.+.+.+.|+ ++..
T Consensus 179 ~~~-~v~i~SF~--~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 255 (313)
T 3l12_A 179 MEP-RTVMHSFD--WALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGGQLWCPYFLD 255 (313)
T ss_dssp CGG-GEEEEESC--HHHHHHHHHHCTTSCEEEEECCCC-------------CCCTTTCCSCHHHHHHHHTCSEEEEBGGG
T ss_pred CCC-CEEEEcCC--HHHHHHHHHHCCCCcEEEEeccccccccccccccccccccchhccccHHHHHHHhCCcEEecchhc
Confidence 345 66664433 2334566777787777666544321 012445555665 4433
Q ss_pred cCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 103 GSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
.+..-++.+.+.|+. -..++ ..++++++.+++.||.-|..|..+.+..+.+
T Consensus 256 ~~~~~v~~~~~~Gl~--V~~WT--Vn~~~~~~~l~~~GVDgIiTD~P~~~~~~l~ 306 (313)
T 3l12_A 256 VTPELVAEAHDLGLI--VLTWT--VNEPEDIRRMATTGVDGIVTDYPGRTQRILI 306 (313)
T ss_dssp CCHHHHHHHHHTTCE--EEEBC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCE--EEEEc--CCCHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 467778888999872 24444 4578999999999998888999999887664
No 49
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=68.47 E-value=13 Score=32.05 Aligned_cols=72 Identities=10% Similarity=0.090 Sum_probs=51.4
Q ss_pred EEEEeHHHHHHHHHHHHHhCCC-CceeeeeccCCcHHHHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHH
Q 037610 53 FYLMDLGVVVSLYNHMISNLPM-IHPHYAVKCNPEPALLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVS 131 (405)
Q Consensus 53 ~~v~d~~~l~~n~~~~~~~~~~-~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~ 131 (405)
+|++|-..++..++.+++.-|+ ++++.. ..|.+++.+.+. ++. .|+-.|-..+++
T Consensus 108 ~FliDS~al~~~~~~i~~~~PD~iEiLPG----i~p~iI~~i~~~-------------------~~~-PiIaGGlI~~~e 163 (192)
T 3kts_A 108 LFMIDSSAYNKGVALIQKVQPDCIELLPG----IIPEQVQKMTQK-------------------LHI-PVIAGGLIETSE 163 (192)
T ss_dssp EECCSHHHHHHHHHHHHHHCCSEEEEECT----TCHHHHHHHHHH-------------------HCC-CEEEESSCCSHH
T ss_pred EEEEEcchHHHHHHHHhhcCCCEEEECCc----hhHHHHHHHHHh-------------------cCC-CEEEECCcCCHH
Confidence 6889999999999999988785 455533 133444433321 222 388899999999
Q ss_pred HHHHHHHcCCcEEEecC
Q 037610 132 HIKYAASVGVNLTTVDS 148 (405)
Q Consensus 132 ~l~~a~~~gv~~i~vds 148 (405)
++..|++.|+..++..+
T Consensus 164 dv~~al~aGA~aVsTs~ 180 (192)
T 3kts_A 164 QVNQVIASGAIAVTTSN 180 (192)
T ss_dssp HHHHHHTTTEEEEEECC
T ss_pred HHHHHHHcCCeEEEeCC
Confidence 99999999986555544
No 50
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=67.58 E-value=66 Score=28.47 Aligned_cols=101 Identities=15% Similarity=0.071 Sum_probs=64.8
Q ss_pred CCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccC----CcHHHHHHHHHcCCe-EE----EcCHHHHHHHHhCCC
Q 037610 48 FDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCN----PEPALLEALAALGSN-FD----CGSRSEIEAVLLLDV 116 (405)
Q Consensus 48 ~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN----~~~~vl~~l~~~G~g-~~----vaS~~E~~~a~~~G~ 116 (405)
... .+.+ +|.+. ++++++..|++.+.+..... ....+++.+...|+. +. ..+..-++.+.+.|+
T Consensus 131 ~~~-~v~~~SF~~~~----l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~ 205 (250)
T 3ks6_A 131 MLE-RTTFSSFLLAS----MDELWKATTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLMAQVQAAGL 205 (250)
T ss_dssp CGG-GEEEEESCHHH----HHHHHHHCCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHHHHHHHTTC
T ss_pred CCC-CEEEEeCCHHH----HHHHHHHCCCCcEEEEecccccccchhHHHHHHHhcCCCEEecchhhCCHHHHHHHHHCCC
Confidence 345 5666 44443 34567777877665544321 112345555666752 32 246677788888887
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 117 SPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
. -..++ ..++++++.+++.||.-|.-|..+.+..+.+
T Consensus 206 ~--V~~WT--vn~~~~~~~l~~~GVDgIiTD~P~~~~~~~~ 242 (250)
T 3ks6_A 206 D--FGCWA--AHTPSQITKALDLGVKVFTTDRPTLAIALRT 242 (250)
T ss_dssp E--EEEEC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred E--EEEEe--CCCHHHHHHHHHcCCCEEEcCCHHHHHHHHH
Confidence 2 24453 3478999999999998888999999887654
No 51
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=67.14 E-value=70 Score=30.51 Aligned_cols=28 Identities=11% Similarity=0.247 Sum_probs=20.1
Q ss_pred ChhhHHHHHHHHHHc---CCeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEAS---GLSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~---~l~l~Gih~H~gs~ 217 (405)
.+.++.++++.+++. ++ ..|+|+|--.+
T Consensus 171 ~P~~~~~lv~~l~~~~~~~~-~i~~H~Hnd~G 201 (382)
T 2ztj_A 171 TPRQVYALVREVRRVVGPRV-DIEFHGHNDTG 201 (382)
T ss_dssp CHHHHHHHHHHHHHHHTTTS-EEEEEEBCTTS
T ss_pred CHHHHHHHHHHHHHhcCCCC-eEEEEeCCCcc
Confidence 788888888887653 34 47888886554
No 52
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=67.00 E-value=65 Score=29.45 Aligned_cols=16 Identities=13% Similarity=0.059 Sum_probs=9.1
Q ss_pred EcCHHHHHHHHhCCCC
Q 037610 102 CGSRSEIEAVLLLDVS 117 (405)
Q Consensus 102 vaS~~E~~~a~~~G~~ 117 (405)
+.....++.+.++|++
T Consensus 80 ~~~~~~i~~a~~ag~~ 95 (298)
T 2cw6_A 80 TPNLKGFEAAVAAGAK 95 (298)
T ss_dssp CCSHHHHHHHHHTTCS
T ss_pred cCCHHhHHHHHHCCCC
Confidence 3455556666666653
No 53
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=66.24 E-value=68 Score=30.50 Aligned_cols=92 Identities=17% Similarity=0.132 Sum_probs=50.5
Q ss_pred cEEEEe-----HHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc----C-----------------
Q 037610 52 PFYLMD-----LGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG----S----------------- 104 (405)
Q Consensus 52 P~~v~d-----~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va----S----------------- 104 (405)
++.++| .+.+.+.++++++.+|++.+. +..-..++-++.+.+.|+ .+.|. |
T Consensus 122 d~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi--~G~v~t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~ 199 (366)
T 4fo4_A 122 DVLLIDSSHGHSEGVLQRIRETRAAYPHLEII--GGNVATAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITA 199 (366)
T ss_dssp SEEEEECSCTTSHHHHHHHHHHHHHCTTCEEE--EEEECSHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHH
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHhcCCCceE--eeeeCCHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHH
Confidence 555553 245556677777777654432 233345666677777777 45551 0
Q ss_pred HHHHHHHH-hCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 105 RSEIEAVL-LLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 105 ~~E~~~a~-~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
+.|+..+. ..++ .|+-.|...+..++..|+..|...+.+-|
T Consensus 200 l~~v~~~~~~~~i---PVIA~GGI~~~~di~kala~GAd~V~vGs 241 (366)
T 4fo4_A 200 IADAAGVANEYGI---PVIADGGIRFSGDISKAIAAGASCVMVGS 241 (366)
T ss_dssp HHHHHHHHGGGTC---CEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHHhhcCC---eEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 11222211 1233 26666766677777777777776555554
No 54
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=66.05 E-value=75 Score=31.63 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=57.9
Q ss_pred cEEEE-----eHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc----C-----------------
Q 037610 52 PFYLM-----DLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG----S----------------- 104 (405)
Q Consensus 52 P~~v~-----d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va----S----------------- 104 (405)
...++ +...+.+.++++++.+|+..+. ++.-...+-++.+.+.|+ ++.|. |
T Consensus 270 d~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi--~g~v~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~ 347 (511)
T 3usb_A 270 DAIVLDTAHGHSQGVIDKVKEVRAKYPSLNII--AGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTA 347 (511)
T ss_dssp SEEEEECSCTTSHHHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHH
T ss_pred ceEEecccccchhhhhhHHHHHHHhCCCceEE--eeeeccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHH
Confidence 45555 3455667788888888764433 444456777888888887 55541 1
Q ss_pred HHHHHHHHh-CCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 105 RSEIEAVLL-LDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 105 ~~E~~~a~~-~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
+.|+..+.+ .++ .|+..|...+..++..|+..|+..+.+-+
T Consensus 348 l~~v~~~~~~~~i---PVIa~GGI~~~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 348 VYDCATEARKHGI---PVIADGGIKYSGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp HHHHHHHHHTTTC---CEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred HHHHHHHHHhCCC---cEEEeCCCCCHHHHHHHHHhCchhheecH
Confidence 122222222 344 37777888888888888888887666665
No 55
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=65.74 E-value=72 Score=28.23 Aligned_cols=97 Identities=13% Similarity=0.148 Sum_probs=65.1
Q ss_pred cEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcEEEc
Q 037610 52 PFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 52 P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~Ii~~ 124 (405)
++.+ +|.+.+ +++++..|++.+.|-+...+. .....+...|+ ++.+ .+..-++.+.+.|+. -..++
T Consensus 145 ~vii~SF~~~~l----~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~--v~~WT 217 (252)
T 3qvq_A 145 PLLFSSFNYFAL----VSAKALWPEIARGYNVSAIPS-AWQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGYK--VLAFT 217 (252)
T ss_dssp CEEEEESCHHHH----HHHHHHCTTSCEEEECSSCCT-THHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCE--EEEEC
T ss_pred CEEEEeCCHHHH----HHHHHHCCCCcEEEEEecCch-hHHHHHHHcCCeEEecchhhCCHHHHHHHHHCCCE--EEEEc
Confidence 4555 455554 456666787777776654321 23344555665 4433 566777888889873 24453
Q ss_pred CCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 125 NPCKPVSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 125 gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
.-++++++.+++.||.-|.-|..+.+..+.+
T Consensus 218 --vn~~~~~~~l~~~GVdgIiTD~P~~~~~~l~ 248 (252)
T 3qvq_A 218 --INDESLALKLYNQGLDAVFSDYPQKIQSAID 248 (252)
T ss_dssp --CCCHHHHHHHHHTTCCEEEESSHHHHHHHHH
T ss_pred --CCCHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 3578999999999999889999999887654
No 56
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=63.51 E-value=35 Score=29.82 Aligned_cols=78 Identities=15% Similarity=0.327 Sum_probs=53.4
Q ss_pred HHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEE------------EcCCCCCHHHHHHHHHcCCcEEEecC-----
Q 037610 87 PALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRII------------YANPCKPVSHIKYAASVGVNLTTVDS----- 148 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii------------~~gp~k~~~~l~~a~~~gv~~i~vds----- 148 (405)
.++++.+.+.|+ ++.+.++..++.+++. .+.+ ++ +.+ .+.++++.+++.|+..++++.
T Consensus 39 ~~~a~~~~~~G~~~i~~~~~~~i~~i~~~-~~~p-~i~~~~~~~~~~~~~i~--~~~~~i~~~~~~Gad~V~l~~~~~~~ 114 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRANSVRDIKEIQAI-TDLP-IIGIIKKDYPPQEPFIT--ATMTEVDQLAALNIAVIAMDCTKRDR 114 (234)
T ss_dssp HHHHHHHHHHTCSEEEEESHHHHHHHHTT-CCSC-EEEECBCCCTTSCCCBS--CSHHHHHHHHTTTCSEEEEECCSSCC
T ss_pred HHHHHHHHHCCCcEeecCCHHHHHHHHHh-CCCC-EEeeEcCCCCccccccC--ChHHHHHHHHHcCCCEEEEcccccCC
Confidence 578888989998 8999999998888876 2222 22 111 246889999999998776632
Q ss_pred ------HHHHHHHHhHCCCCeEEEEE
Q 037610 149 ------VEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 149 ------~~el~~i~~~~~~~~v~lRi 168 (405)
.+.++.+.+..++..+++.+
T Consensus 115 ~~~~~~~~~i~~i~~~~~~~~v~~~~ 140 (234)
T 1yxy_A 115 HDGLDIASFIRQVKEKYPNQLLMADI 140 (234)
T ss_dssp TTCCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCccHHHHHHHHHHhCCCCeEEEeC
Confidence 24456666666666666544
No 57
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=63.38 E-value=28 Score=31.67 Aligned_cols=84 Identities=4% Similarity=-0.093 Sum_probs=55.3
Q ss_pred cHHHHHHHHHhhcCCCCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCc--HHHHHHHHHcCCeEEEcCH---
Q 037610 33 ELTEFMQSTILKRQEFDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPE--PALLEALAALGSNFDCGSR--- 105 (405)
Q Consensus 33 ~~~~~~~~~~~~~~~~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~--~~vl~~l~~~G~g~~vaS~--- 105 (405)
.+.++++.+... .+. |+-| ++.+.+++-++.. ++..+.-++-+-.. +.+++.++++|+.+-+...
T Consensus 65 rv~~vi~~l~~~---~~~-pisIDT~~~~v~~aal~a~----~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~ 136 (271)
T 2yci_X 65 VMEWLVKTIQEV---VDL-PCCLDSTNPDAIEAGLKVH----RGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEK 136 (271)
T ss_dssp HHHHHHHHHHHH---CCC-CEEEECSCHHHHHHHHHHC----CSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTT
T ss_pred HHHHHHHHHHHh---CCC-eEEEeCCCHHHHHHHHHhC----CCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCC
Confidence 456666666432 356 7766 6666666665543 46667776666444 7899999999986666443
Q ss_pred ------H--------HHHHHHhCCCCCCcEEEc
Q 037610 106 ------S--------EIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 106 ------~--------E~~~a~~~G~~~~~Ii~~ 124 (405)
+ -++.+.++|+++++|++.
T Consensus 137 G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilD 169 (271)
T 2yci_X 137 GVPKDANDRSQLAMELVANADAHGIPMTELYID 169 (271)
T ss_dssp BCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEe
Confidence 1 134577889998889986
No 58
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=63.25 E-value=80 Score=27.90 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=63.6
Q ss_pred CCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcE
Q 037610 49 DEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRI 121 (405)
Q Consensus 49 ~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~I 121 (405)
.. .+++ +|.+. ++++++..|++.+.|-+..... ...+.+.+.|+ ++.+ .+..-++.+.+.|+. -.
T Consensus 144 ~~-~vii~SF~~~~----l~~~~~~~p~~~~~~l~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~--v~ 215 (252)
T 2pz0_A 144 EE-RVIISSFNHYS----LRDVKKMAPHLKIGLLYQCGLV-EPWHMALRMEAYSLHPFYFNIIPELVEGCKKNGVK--LF 215 (252)
T ss_dssp TT-TEEEEESBHHH----HHHHHHHCTTSEEEEEECSBCS-STHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCE--EC
T ss_pred CC-CEEEEeCCHHH----HHHHHHHCCCCCEEEEecCccc-cHHHHHHHcCCeEEecchhcCCHHHHHHHHHCCCE--EE
Confidence 35 5666 44543 4566777787777766654332 12344555565 4443 456777888888872 12
Q ss_pred EEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHH
Q 037610 122 IYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIR 156 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~ 156 (405)
.++ ..++++++.+++.|+.-|..|..+.+..+.
T Consensus 216 ~wT--vn~~~~~~~l~~~GvdgIiTD~P~~~~~~l 248 (252)
T 2pz0_A 216 PWT--VDRKEDMERMIKAGVDGIITDDPETLINLV 248 (252)
T ss_dssp CBC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred EEC--CCCHHHHHHHHHcCCCEEEcCCHHHHHHHH
Confidence 333 457899999999999878889998887654
No 59
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=61.85 E-value=73 Score=27.98 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=61.6
Q ss_pred cEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc------CHHHHHHHHhCCCCCCcEE
Q 037610 52 PFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG------SRSEIEAVLLLDVSPDRII 122 (405)
Q Consensus 52 P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va------S~~E~~~a~~~G~~~~~Ii 122 (405)
.+.+ +|.+. ++++++..|++.+.|-+... .+. .+.+.|+ ++... +..-+..+.+.|+ .-..
T Consensus 132 ~v~~~Sf~~~~----l~~~~~~~p~~~~~~l~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~--~v~~ 201 (238)
T 3no3_A 132 RTDYISFNMDA----CKEFIRLCPKSEVSYLNGEL-SPM---ELKELGFTGLDYHYKVLQSHPDWVKDCKVLGM--TSNV 201 (238)
T ss_dssp GEEEEESCHHH----HHHHHHHCTTSCEEECSSCS-CHH---HHHHTTCCEEEEEHHHHHHSTTHHHHHHHTTC--EEEE
T ss_pred CEEEEECCHHH----HHHHHHHCCCCeEEEEeCCC-CHH---HHHHCCCceEeccHHhhhCCHHHHHHHHHCCC--EEEE
Confidence 5555 44444 45667777877776655332 232 3455676 55543 2344667888887 3344
Q ss_pred EcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 123 YANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
++ ..++++++++++.||.-|.-|..+.+..+.+
T Consensus 202 WT--Vn~~~~~~~l~~~GVdgIiTD~P~~~~~~l~ 234 (238)
T 3no3_A 202 WT--VDDPKLMEEMIDMGVDFITTDLPEETQKILH 234 (238)
T ss_dssp EC--CCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred EC--CCCHHHHHHHHHcCCCEEECCCHHHHHHHHH
Confidence 54 4578999999999998888999999887653
No 60
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=60.53 E-value=23 Score=31.21 Aligned_cols=39 Identities=5% Similarity=0.035 Sum_probs=22.1
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEEEeHH--HHHHHHHHHHHhCCCC
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYLMDLG--VVVSLYNHMISNLPMI 75 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v~d~~--~l~~n~~~~~~~~~~~ 75 (405)
....++.+.++.. |= +...+.+. .-.+.++++++.+|+.
T Consensus 25 ~~a~~~a~al~~g----Gi-~~iEvt~~t~~a~~~I~~l~~~~p~~ 65 (217)
T 3lab_A 25 VHAIPMAKALVAG----GV-HLLEVTLRTEAGLAAISAIKKAVPEA 65 (217)
T ss_dssp GGHHHHHHHHHHT----TC-CEEEEETTSTTHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHc----CC-CEEEEeCCCccHHHHHHHHHHHCCCC
Confidence 4555666666543 34 55665432 3445667777777754
No 61
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=59.66 E-value=78 Score=28.96 Aligned_cols=28 Identities=14% Similarity=0.212 Sum_probs=14.7
Q ss_pred ChhhHHHHHHHHHHc--CC--eEEEEEEecCC
Q 037610 189 HPQEIMPLLKAAEAS--GL--SVVGVSFHVGS 216 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~--~l--~l~Gih~H~gs 216 (405)
.++++.++++.+++. ++ -..|+|+|--.
T Consensus 177 ~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~ 208 (293)
T 3ewb_X 177 NPTEFGQLFQDLRREIKQFDDIIFASHCHDDL 208 (293)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGSEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence 566666666665542 21 13566666543
No 62
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=59.28 E-value=1.3e+02 Score=29.11 Aligned_cols=28 Identities=14% Similarity=0.373 Sum_probs=20.5
Q ss_pred ChhhHHHHHHHHHH-cCCeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEA-SGLSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~-~~l~l~Gih~H~gs~ 217 (405)
.+.++.++++.++. .++ ..++|+|--.+
T Consensus 207 ~P~~v~~lv~~l~~~~~~-~i~~H~Hnd~G 235 (423)
T 3ivs_A 207 TPRQVYDLIRTLRGVVSC-DIECHFHNDTG 235 (423)
T ss_dssp CHHHHHHHHHHHHHHCSS-EEEEEEBCTTS
T ss_pred CHHHHHHHHHHHHhhcCC-eEEEEECCCCc
Confidence 78888888888765 455 46888886554
No 63
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=59.22 E-value=24 Score=31.28 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=39.2
Q ss_pred HHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEE------------EcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 87 PALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRII------------YANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii------------~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
..+++...+.|+ ++.+.|.++++.+++. ++-+ |+ |..| +.++++.+++.|+..+.++.
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~-v~~P-vig~~k~d~~~~~~~I~~--~~~~i~~~~~~Gad~V~l~~ 109 (232)
T 3igs_A 39 AAMALAAEQAGAVAVRIEGIDNLRMTRSL-VSVP-IIGIIKRDLDESPVRITP--FLDDVDALAQAGAAIIAVDG 109 (232)
T ss_dssp HHHHHHHHHTTCSEEEEESHHHHHHHHTT-CCSC-EEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCeEEEECCHHHHHHHHHh-cCCC-EEEEEeecCCCcceEeCc--cHHHHHHHHHcCCCEEEECc
Confidence 567777777787 8888888888888876 3333 22 2223 45678888888887665543
No 64
>3eye_A PTS system N-acetylgalactosamine-specific IIB component 1; structural genomics, phosphotransferase, PSI-2, protein structure initiative; 1.45A {Escherichia coli O157} SCOP: c.38.1.0
Probab=58.51 E-value=74 Score=26.69 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=58.6
Q ss_pred cHHHHHHHHHc-CCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCc--EEEecC--------------
Q 037610 86 EPALLEALAAL-GSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVN--LTTVDS-------------- 148 (405)
Q Consensus 86 ~~~vl~~l~~~-G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~--~i~vds-------------- 148 (405)
...+++..... |+.+.+-|.+++....+.+.+..++++. +++++++.++++.|+. .++|.+
T Consensus 48 ~k~~lkmA~P~~gvk~~i~sve~ai~~~~~~~~~~~v~il--~k~p~d~~~lve~Gv~i~~vNvG~m~~~~gk~~i~~~V 125 (168)
T 3eye_A 48 QQKLMGITAETYGFGIRFFTIEKTINVIGKAAPHQKIFLI--CRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKV 125 (168)
T ss_dssp GGHHHHHHHHHHTCEEEEECHHHHHHHGGGCCTTCCEEEE--ESSHHHHHHHHHTTCCCCEEEECCBCCCTTCEEEETTE
T ss_pred HHHHHHhcCCCCCCeEEEEEHHHHHHHHhcccCCceEEEE--ECCHHHHHHHHHcCCCCCEEEECCCcCCCCCEEEeccE
Confidence 34677777777 8899999999988777766555566554 4678888888888753 355544
Q ss_pred ---HHHHHHHHhHC-CCCeEEEEEecCC
Q 037610 149 ---VEELDKIRNWH-PKSDLLIRIKSPD 172 (405)
Q Consensus 149 ---~~el~~i~~~~-~~~~v~lRi~~~~ 172 (405)
.+|++.+.++. ...++-+|.-|+.
T Consensus 126 ~v~~ed~~~lk~L~~~Gv~v~~q~vP~d 153 (168)
T 3eye_A 126 YVDDQDLTDLRFIKQRGVNVFIQDVPGD 153 (168)
T ss_dssp EECHHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECcCC
Confidence 56777666653 3566777776654
No 65
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=58.32 E-value=47 Score=30.92 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=62.0
Q ss_pred HHHHHhCC-CCCCcEEEcCCCC---CHHHHHHHHHcCCcEEEecCHHH------HHHHHhHCCC--CeEEEEEecCCCCC
Q 037610 108 IEAVLLLD-VSPDRIIYANPCK---PVSHIKYAASVGVNLTTVDSVEE------LDKIRNWHPK--SDLLIRIKSPDDSG 175 (405)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~k---~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~~~--~~v~lRi~~~~~~~ 175 (405)
+..+.+.| +.+.+++..|.-. ++++.+.+.+.|+.++..+.+.+ ++++.+...+ ..+.|-+..+.-.-
T Consensus 172 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~~~vylSiDiDvLDp 251 (322)
T 3m1r_A 172 FRRLLDEEIIEGQHLIQLGIREFSNSQAYEAYAKKHNVNIHTMDMIREKGLIPTIKEILPVVQDKTDFIFISVDMDVLDQ 251 (322)
T ss_dssp HHHHHHTTSSCGGGEEEEEECTTSSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGBCT
T ss_pred HHHHHhccCCCCceEEEEeeCCCCCCHHHHHHHHHCCCEEEEHHHHhhcCHHHHHHHHHHHhhccCCeEEEEEeecccCh
Confidence 34555544 4567788777643 68899999999987665554443 1222221112 26777777654210
Q ss_pred CC---CCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 176 AK---YPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 176 ~~---~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
+. ..+....|+ +..|+.++++.+... -+++|+..=
T Consensus 252 a~aPgtgtp~pgGl--t~~e~~~il~~l~~~-~~vvg~Div 289 (322)
T 3m1r_A 252 SHAPGCPAIGPGGL--YTDELLEAVKYIAQQ-PNVAGIEIV 289 (322)
T ss_dssp TTCTTSSSCCSSCB--CHHHHHHHHHHHHTS-TTEEEEEEE
T ss_pred hhCCCCCCCCCCCC--CHHHHHHHHHHHhcc-CCEEEEEEE
Confidence 11 122357899 999999999887643 357776553
No 66
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=58.21 E-value=90 Score=28.74 Aligned_cols=69 Identities=16% Similarity=0.086 Sum_probs=45.1
Q ss_pred CCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccC-CcHHHHHHHHHcCCeEEEcCH----------H--------H
Q 037610 49 DEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCN-PEPALLEALAALGSNFDCGSR----------S--------E 107 (405)
Q Consensus 49 ~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN-~~~~vl~~l~~~G~g~~vaS~----------~--------E 107 (405)
+. |+-| ++.+.+++-++. +..+...+-.- ..+++++.+++.|+.+-+... . -
T Consensus 115 ~v-piSIDT~~~~V~~aAl~a------Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~ 187 (297)
T 1tx2_A 115 KL-PISIDTYKAEVAKQAIEA------GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDS 187 (297)
T ss_dssp CS-CEEEECSCHHHHHHHHHH------TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHH
T ss_pred Cc-eEEEeCCCHHHHHHHHHc------CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHH
Confidence 45 6555 556555555544 45666777664 367888888888886666441 1 2
Q ss_pred HHHHHhCCCCCCcEEEc
Q 037610 108 IEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 108 ~~~a~~~G~~~~~Ii~~ 124 (405)
++.+.++|+++++|++.
T Consensus 188 i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 188 IKIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHHTTCCGGGEEEE
T ss_pred HHHHHHcCCChhcEEEe
Confidence 45677788888888886
No 67
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=58.15 E-value=1.1e+02 Score=27.76 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCC-eEEE--------cCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEec----CHHHHH
Q 037610 87 PALLEALAALGS-NFDC--------GSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVD----SVEELD 153 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~v--------aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vd----s~~el~ 153 (405)
..+++...+.|+ ++-| .|.+.+..+++. ++-+ |+...-..++.++.+|...|+..+.+. +.++++
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~-v~lP-Vl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~ 159 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQA-CSLP-ALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAK 159 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHT-SSSC-EEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHh-cCCC-EEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHH
Confidence 478888888998 8888 688888888876 3333 666655566778888888887654443 234555
Q ss_pred HHHhHC--CCCeEEEEEe
Q 037610 154 KIRNWH--PKSDLLIRIK 169 (405)
Q Consensus 154 ~i~~~~--~~~~v~lRi~ 169 (405)
.+.+.. ....+++-++
T Consensus 160 ~l~~~a~~lGl~~lvevh 177 (272)
T 3tsm_A 160 ELEDTAFALGMDALIEVH 177 (272)
T ss_dssp HHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHcCCeEEEEeC
Confidence 554332 2345555554
No 68
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=57.55 E-value=23 Score=31.37 Aligned_cols=59 Identities=19% Similarity=0.263 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcE-----------EEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 87 PALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRI-----------IYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~I-----------i~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
..+++...+.|+ ++.+.|.++++.+++. ++-+.| +|..| +.++++.+++.|+..+.+|.
T Consensus 39 ~~~A~a~~~~Ga~~i~~~~~~~i~~ir~~-v~~Pvig~~k~~~~~~~~~I~~--~~~~i~~~~~aGad~I~l~~ 109 (229)
T 3q58_A 39 AAMAQAAASAGAVAVRIEGIENLRTVRPH-LSVPIIGIIKRDLTGSPVRITP--YLQDVDALAQAGADIIAFDA 109 (229)
T ss_dssp HHHHHHHHHTTCSEEEEESHHHHHHHGGG-CCSCEEEECBCCCSSCCCCBSC--SHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCcEEEECCHHHHHHHHHh-cCCCEEEEEeecCCCCceEeCc--cHHHHHHHHHcCCCEEEECc
Confidence 567777777888 8999999999888876 333311 12233 45788889999988666553
No 69
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=56.67 E-value=1.2e+02 Score=27.86 Aligned_cols=18 Identities=11% Similarity=0.184 Sum_probs=11.8
Q ss_pred cHHHHHHHHHcCC-eEEEc
Q 037610 86 EPALLEALAALGS-NFDCG 103 (405)
Q Consensus 86 ~~~vl~~l~~~G~-g~~va 103 (405)
-.++++.|.+.|+ .+|+.
T Consensus 30 k~~i~~~L~~~Gv~~IE~g 48 (307)
T 1ydo_A 30 KITWINQLSRTGLSYIEIT 48 (307)
T ss_dssp HHHHHHHHHTTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEC
Confidence 3466777777776 66665
No 70
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=56.54 E-value=73 Score=30.00 Aligned_cols=84 Identities=15% Similarity=0.160 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC---------------------HHHHHHHHh-CCC
Q 037610 60 VVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS---------------------RSEIEAVLL-LDV 116 (405)
Q Consensus 60 ~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS---------------------~~E~~~a~~-~G~ 116 (405)
.+.+.++++++.+|+..+. +|.-.+++-++.+.+.|+ ++.|+. +.|+..+.+ .++
T Consensus 147 ~~~~~i~~lr~~~~~~~vi--~g~v~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~i 224 (351)
T 2c6q_A 147 HFVEFVKDVRKRFPQHTIM--AGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKG 224 (351)
T ss_dssp HHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCeEE--EEeCCCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCC
Confidence 3455566666666543332 444445666666666776 555532 022222221 122
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 117 SPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
.++..|...+..++..|+..|...+.+-+
T Consensus 225 ---pvIa~GGI~~g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 225 ---HIISDGGCSCPGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp ---EEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred ---cEEEeCCCCCHHHHHHHHHcCCCceeccH
Confidence 25666666667777777777665444444
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=55.98 E-value=1.5e+02 Score=29.23 Aligned_cols=106 Identities=16% Similarity=0.132 Sum_probs=60.2
Q ss_pred cHHHHHHHHHhhcCCCCCccEEEEe-----HHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc---
Q 037610 33 ELTEFMQSTILKRQEFDEVPFYLMD-----LGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG--- 103 (405)
Q Consensus 33 ~~~~~~~~~~~~~~~~~t~P~~v~d-----~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va--- 103 (405)
+..+.++.++.. +- .+.++| ...+.+.++++++.+|+..+. ++.-...+-++.+.+.|+ .+.|.
T Consensus 229 ~~~~~a~~l~~a----G~-d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi--~g~v~t~e~a~~l~~aGaD~I~vg~g~ 301 (490)
T 4avf_A 229 DTGERVAALVAA----GV-DVVVVDTAHGHSKGVIERVRWVKQTFPDVQVI--GGNIATAEAAKALAEAGADAVKVGIGP 301 (490)
T ss_dssp THHHHHHHHHHT----TC-SEEEEECSCCSBHHHHHHHHHHHHHCTTSEEE--EEEECSHHHHHHHHHTTCSEEEECSSC
T ss_pred chHHHHHHHhhc----cc-ceEEecccCCcchhHHHHHHHHHHHCCCceEE--EeeeCcHHHHHHHHHcCCCEEEECCCC
Confidence 344555555432 33 455554 345667777777777654332 233345667777778887 55551
Q ss_pred -C-----------------HHHHHHHH-hCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 104 -S-----------------RSEIEAVL-LLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 104 -S-----------------~~E~~~a~-~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
| +.|+..+. +.++ .|+-.|...+.+++..|+..|+..+.+-+
T Consensus 302 Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~i---PVIa~GGI~~~~di~kal~~GAd~V~vGs 362 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQISAIANVAAALEGTGV---PLIADGGIRFSGDLAKAMVAGAYCVMMGS 362 (490)
T ss_dssp STTCHHHHHTCBCCCHHHHHHHHHHHHTTTTC---CEEEESCCCSHHHHHHHHHHTCSEEEECT
T ss_pred CcCCCccccCCCCccHHHHHHHHHHHhccCCC---cEEEeCCCCCHHHHHHHHHcCCCeeeecH
Confidence 1 12222222 2233 36777777778888888887776666655
No 72
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=55.90 E-value=27 Score=32.83 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=19.8
Q ss_pred ChhhHHHHHHHHHH-c-CCeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEA-S-GLSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~-~-~l~l~Gih~H~gs~ 217 (405)
.++++.++++.+++ . .+. .|+|+|--.+
T Consensus 196 ~P~~v~~lv~~l~~~~p~~~-i~~H~Hnd~G 225 (337)
T 3ble_A 196 SPEETFQGVDSLIQKYPDIH-FEFHGHNDYD 225 (337)
T ss_dssp CHHHHHHHHHHHHHHCTTSC-EEEECBCTTS
T ss_pred CHHHHHHHHHHHHHhcCCCe-EEEEecCCcc
Confidence 78888888888765 2 444 6788886554
No 73
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=54.26 E-value=85 Score=29.22 Aligned_cols=29 Identities=10% Similarity=0.036 Sum_probs=17.7
Q ss_pred ChhhHHHHHHHHHHc-CC---eEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEAS-GL---SVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~-~l---~l~Gih~H~gs~ 217 (405)
.+.++.++++.+++. .- ...|+|+|--.+
T Consensus 178 ~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~G 210 (325)
T 3eeg_A 178 LPWQYGERIKYLMDNVSNIDKAILSAHCHNDLG 210 (325)
T ss_dssp CHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTS
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCC
Confidence 667777777776652 21 246777775443
No 74
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=53.98 E-value=1e+02 Score=26.07 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=13.9
Q ss_pred CHHHHHHHHHcCCcEEEecC
Q 037610 129 PVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 129 ~~~~l~~a~~~gv~~i~vds 148 (405)
|.+++..|.+.|+..+.+..
T Consensus 113 t~~e~~~a~~~Gad~vk~~~ 132 (205)
T 1wa3_A 113 TPTELVKAMKLGHTILKLFP 132 (205)
T ss_dssp SHHHHHHHHHTTCCEEEETT
T ss_pred CHHHHHHHHHcCCCEEEEcC
Confidence 57778888888877555543
No 75
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=53.53 E-value=1.1e+02 Score=27.66 Aligned_cols=118 Identities=9% Similarity=0.105 Sum_probs=70.4
Q ss_pred eEEEe---ecCCcHHHHHHHH-HhhcCCCCCccEEE---E--------eHHHHHHHHHHHHHhCCCCceeeeeccCCcHH
Q 037610 24 RVTTV---VTKDELTEFMQST-ILKRQEFDEVPFYL---M--------DLGVVVSLYNHMISNLPMIHPHYAVKCNPEPA 88 (405)
Q Consensus 24 ~~~~~---~~~~~~~~~~~~~-~~~~~~~~t~P~~v---~--------d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~ 88 (405)
.++.| +.+.+.+|.++.. +.++.-.++ .+.= + |.....+..+.+.+ .+++++. =++.++.
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~-~~iKlEv~~d~~~llpD~~~tv~aa~~L~~--~Gf~Vlp--y~~dd~~ 147 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGH-NLVKLEVLADQKTLFPNVVETLKAAEQLVK--DGFDVMV--YTSDDPI 147 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSC-CEEEECCBSCTTTCCBCHHHHHHHHHHHHT--TTCEEEE--EECSCHH
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCC-CeEEEEeecCccccCcCHHHHHHHHHHHHH--CCCEEEE--EeCCCHH
Confidence 44555 3347888888754 222112455 5421 2 44444444554443 2566541 1677899
Q ss_pred HHHHHHHcCC-eEEE-----------cCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 89 LLEALAALGS-NFDC-----------GSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 89 vl~~l~~~G~-g~~v-----------aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
+++.+.+.|+ .+.. .+.+=++.+++. .+-+ ++..|...++++...|++.|+.-+.|.|
T Consensus 148 ~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~-~~vP-VI~eGGI~TPsDAa~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 148 IARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE-AKVP-VLVDAGVGTASDAAIAMELGCEAVLMNT 217 (265)
T ss_dssp HHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH-CSSC-BEEESCCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhc-CCCC-EEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 9999999987 4443 344444555553 2223 6778888899999999999987555554
No 76
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=53.09 E-value=87 Score=29.66 Aligned_cols=104 Identities=8% Similarity=0.045 Sum_probs=71.6
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+.+...+.+++++++++ .+-..+++|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...+
T Consensus 173 ~~~~~~e~v~avr~a~g--d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~~i-PI~~de 248 (384)
T 2pgw_A 173 GEKLDLEITAAVRGEIG--DARLRLDANEGWSVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREK-VGI-PIVADQ 248 (384)
T ss_dssp CHHHHHHHHHHHHTTST--TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-CSS-CEEEST
T ss_pred CHHHHHHHHHHHHHHcC--CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhh-CCC-CEEEeC
Confidence 46777888999998887 4445789987 3467888888887 66632 44555555543 222 388888
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
...+.++++.+++.| +..+.++ .+.+..++.+.+....+
T Consensus 249 ~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 293 (384)
T 2pgw_A 249 AAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGL 293 (384)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTC
T ss_pred CcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCC
Confidence 888999999999876 5567775 67777777766543333
No 77
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.88 E-value=21 Score=30.68 Aligned_cols=30 Identities=3% Similarity=0.117 Sum_probs=12.8
Q ss_pred HHHHHHHHHcCCeEEEcCHHHHHHHHhCCC
Q 037610 87 PALLEALAALGSNFDCGSRSEIEAVLLLDV 116 (405)
Q Consensus 87 ~~vl~~l~~~G~g~~vaS~~E~~~a~~~G~ 116 (405)
...++.+.+.|+.+-|...-=.+.|.+.|+
T Consensus 132 ~~~i~~l~~~G~~vvVG~~~~~~~A~~~Gl 161 (196)
T 2q5c_A 132 TTLISKVKTENIKIVVSGKTVTDEAIKQGL 161 (196)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCeEEECCHHHHHHHHHcCC
Confidence 334444444444444444333444444444
No 78
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=52.78 E-value=32 Score=33.15 Aligned_cols=100 Identities=11% Similarity=0.069 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD--CG--SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~--va--S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.-.+.++++|+.++ ++.+ .+.+|. ...+++.|.+.|+ .+| +. ..+.+..+++. .+- .|....
T Consensus 191 ~~~d~~~v~avR~a~G~d~~l--~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~-~~i-PIa~dE 266 (404)
T 4e5t_A 191 LERSEAFCKQIRAAVGTKADL--LFGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARY-TSI-PVATGE 266 (404)
T ss_dssp HHHHHHHHHHHHHHHGGGSEE--EECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCeE--EEeCCCCcCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhh-CCC-CEEeCC
Confidence 5566778888888885 4444 588997 3467788888887 787 33 45566655554 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCC
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPK 161 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~ 161 (405)
...+..+++.+++.| +..+++| -+.+..++.+.+..
T Consensus 267 ~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~ 308 (404)
T 4e5t_A 267 RLCTKYEFSRVLETGAASILQMNLGRVGGLLEAKKIAAMAEC 308 (404)
T ss_dssp TCCHHHHHHHHHHHTCCSEECCCTTTSSCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHhCCCCEEecCccccCCHHHHHHHHHHHHH
Confidence 777788888888765 4556665 57777777766543
No 79
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=52.77 E-value=53 Score=31.96 Aligned_cols=104 Identities=9% Similarity=0.063 Sum_probs=72.3
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~ 124 (405)
|.+...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...
T Consensus 185 ~~~~d~e~v~avR~avG~d~~L--~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~-~~i-PIa~d 260 (433)
T 3rcy_A 185 DISLSVEFCRKIRAAVGDKADL--LFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARA-VRI-PVATG 260 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTSSEE--EECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-SSS-CEEEC
T ss_pred hHHHHHHHHHHHHHHhCCCCeE--EEeCCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhc-cCC-CEEec
Confidence 45666788889998884 5544 578887 3567788888887 77733 45566666554 222 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
....+..+++.+++.| +.++++| -+.+..++.+.+....+
T Consensus 261 E~~~~~~~~~~~l~~g~~D~v~~d~~~~GGit~~~kia~lA~~~gv 306 (433)
T 3rcy_A 261 ERLTTKAEFAPVLREGAAAILQPALGRAGGIWEMKKVAAMAEVYNA 306 (433)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCC
Confidence 8888999999999876 5666776 46777778776554433
No 80
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=52.63 E-value=66 Score=30.50 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=44.9
Q ss_pred HHHHHHHHHcCCeEEEcC------HHHHHHHHhCCCCCCcEEEcC--CCCCHHHHHHHHHcCCcEEEecC
Q 037610 87 PALLEALAALGSNFDCGS------RSEIEAVLLLDVSPDRIIYAN--PCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 87 ~~vl~~l~~~G~g~~vaS------~~E~~~a~~~G~~~~~Ii~~g--p~k~~~~l~~a~~~gv~~i~vds 148 (405)
.+-+++..+.|+-+-+-+ .+.++.+++.|++++++++.. ...+.+.++++++.|+ .+.+|.
T Consensus 196 rA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~-yl~fD~ 264 (360)
T 3tn4_A 196 RAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGV-YIAFDR 264 (360)
T ss_dssp HHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTC-EEEECC
T ss_pred HHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCC-EEEEcc
Confidence 455555666787666544 266888899999999988865 3346788899999998 578874
No 81
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=52.60 E-value=52 Score=28.89 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=26.1
Q ss_pred EcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCC------c-EEEecCHHHHHHHHhHC
Q 037610 102 CGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGV------N-LTTVDSVEELDKIRNWH 159 (405)
Q Consensus 102 vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv------~-~i~vds~~el~~i~~~~ 159 (405)
|-+.++++.+.++|. +++++ |+.+++-++.+.++|+ . +.-+.+.+|+.+..+.+
T Consensus 72 Vlt~~~a~~ai~AGA---~fivs-P~~~~evi~~~~~~~v~~~~~~~~~PG~~TptE~~~A~~~G 132 (217)
T 3lab_A 72 VCTADDFQKAIDAGA---QFIVS-PGLTPELIEKAKQVKLDGQWQGVFLPGVATASEVMIAAQAG 132 (217)
T ss_dssp CCSHHHHHHHHHHTC---SEEEE-SSCCHHHHHHHHHHHHHCSCCCEEEEEECSHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHcCC---CEEEe-CCCcHHHHHHHHHcCCCccCCCeEeCCCCCHHHHHHHHHcC
Confidence 344555555555553 23433 4445555555555544 2 23445555555544443
No 82
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=52.60 E-value=1e+02 Score=29.27 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=16.4
Q ss_pred cEEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 120 RIIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
.|+..|...+..++..|+..|...+.+-
T Consensus 201 PVIAdGGI~~~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 201 SIVADGGIKTSGDIVKALAFGADFVMIG 228 (361)
T ss_dssp EEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3555565566666666666666544444
No 83
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=52.19 E-value=28 Score=30.95 Aligned_cols=107 Identities=7% Similarity=0.083 Sum_probs=64.1
Q ss_pred EeHHHHHHHHHHHHHhCCCCc-eeeeeccCCcHHHHHHHHHc--CC--eE-EEcCHHHHHHHHhCCCCCCcEEEcCCCCC
Q 037610 56 MDLGVVVSLYNHMISNLPMIH-PHYAVKCNPEPALLEALAAL--GS--NF-DCGSRSEIEAVLLLDVSPDRIIYANPCKP 129 (405)
Q Consensus 56 ~d~~~l~~n~~~~~~~~~~~~-i~yavKaN~~~~vl~~l~~~--G~--g~-~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~ 129 (405)
.|.+....-.+++.+. +++ +-...++-...+.++.+.+. +. |+ .|-+.++++.+.++|. +++.+ |..+
T Consensus 43 ~~~~~a~~~a~al~~g--Gi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA---~fIvs-P~~~ 116 (232)
T 4e38_A 43 DNAEDIIPLGKVLAEN--GLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGA---TFVVS-PGFN 116 (232)
T ss_dssp SSGGGHHHHHHHHHHT--TCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTC---SEEEC-SSCC
T ss_pred CCHHHHHHHHHHHHHC--CCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCC---CEEEe-CCCC
Confidence 3445555555554432 222 22345555555666666653 22 22 2667888888888886 35554 5567
Q ss_pred HHHHHHHHHcCCcE-EEecCHHHHHHHHhHCCCCeEEEEEecC
Q 037610 130 VSHIKYAASVGVNL-TTVDSVEELDKIRNWHPKSDLLIRIKSP 171 (405)
Q Consensus 130 ~~~l~~a~~~gv~~-i~vds~~el~~i~~~~~~~~v~lRi~~~ 171 (405)
++-++.+.++|+.+ .-+.+.+|+.+-.+.+.+ .+++.|.
T Consensus 117 ~~vi~~~~~~gi~~ipGv~TptEi~~A~~~Gad---~vK~FPa 156 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPGVNNPSTVEAALEMGLT---TLKFFPA 156 (232)
T ss_dssp HHHHHHHHHHTCEEECEECSHHHHHHHHHTTCC---EEEECST
T ss_pred HHHHHHHHHcCCCEEcCCCCHHHHHHHHHcCCC---EEEECcC
Confidence 88888888888752 366788888877766543 3455553
No 84
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=52.08 E-value=65 Score=27.93 Aligned_cols=95 Identities=9% Similarity=0.047 Sum_probs=58.7
Q ss_pred CCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcEEE
Q 037610 49 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 49 ~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~Ii~ 123 (405)
.. .+.+.+.+ ...++.+++..|++.+.|-+.... ...+.+.|+ ++.+ .+..-++.+.+.|+ .-.++
T Consensus 122 ~~-~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~----~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~--~v~~w 192 (224)
T 1vd6_A 122 RE-GVWVSSFD--PLALLALRKAAPGLPLGFLMAEDH----SALLPCLGVEAVHPHHALVTEEAVAGWRKRGL--FVVAW 192 (224)
T ss_dssp CS-SEEEEESC--HHHHHHHHHHCTTSCEEEEESSCC----GGGGGGSCCSEEEEBGGGCCHHHHHHHHHTTC--EEEEE
T ss_pred CC-cEEEEeCC--HHHHHHHHHHCCCCCEEEEecccc----HHHHHHcCCcEEecCcccCCHHHHHHHHHCCC--EEEEE
Confidence 44 56664432 223456677778777666665433 223344555 4433 35666778888887 22344
Q ss_pred cCCCCCHHHHHHHHHcCCcEEEecCHHHHHH
Q 037610 124 ANPCKPVSHIKYAASVGVNLTTVDSVEELDK 154 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~gv~~i~vds~~el~~ 154 (405)
+ ..++++++++++.|+.-|..|..+.+..
T Consensus 193 t--vn~~~~~~~l~~~GvdgI~TD~p~~~~~ 221 (224)
T 1vd6_A 193 T--VNEEGEARRLLALGLDGLIGDRPEVLLP 221 (224)
T ss_dssp C--CCCHHHHHHHHHTTCSEEEESCHHHHTT
T ss_pred e--CCCHHHHHHHHhcCCCEEEcCCHHHHHH
Confidence 4 3478899999999998788888877643
No 85
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=51.81 E-value=1e+02 Score=27.66 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=74.3
Q ss_pred CCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcH--HHHHHHHHcCCeEEEcCH-----------------H
Q 037610 48 FDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEP--ALLEALAALGSNFDCGSR-----------------S 106 (405)
Q Consensus 48 ~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~--~vl~~l~~~G~g~~vaS~-----------------~ 106 (405)
.+. |+-| ++.+.+++-++. +++..+...+-+-..+ .+++.+++.|+.+-+... .
T Consensus 68 ~~~-pisIDT~~~~v~~aAl~a----~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~ 142 (262)
T 1f6y_A 68 SNL-TLCLDSTNIKAIEAGLKK----CKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAME 142 (262)
T ss_dssp CCS-EEEEECSCHHHHHHHHHH----CSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHH
T ss_pred CCC-eEEEeCCCHHHHHHHHhh----CCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 355 6655 556666555543 2355666666654333 788888888886655432 1
Q ss_pred HHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHC-CCCeEEEEEecCCCCCCCCCCCCCCC
Q 037610 107 EIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWH-PKSDLLIRIKSPDDSGAKYPLDSKYG 185 (405)
Q Consensus 107 E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~-~~~~v~lRi~~~~~~~~~~~~~srfG 185 (405)
-++.+.++|+++++|++-...-+ +..|.. -+.++++.++.+.+.. |..++++-++ .-+||
T Consensus 143 ~~~~a~~~Gi~~~~IilDPg~g~-------~g~~~~-~~~~~l~~l~~l~~~~~pg~pvl~G~S-----------rksfg 203 (262)
T 1f6y_A 143 LVAAADEFGLPMEDLYIDPLILP-------ANVAQD-HAPEVLKTLQQIKMLADPAPKTVLGLS-----------NVSQN 203 (262)
T ss_dssp HHHHHHHHTCCGGGEEEECCCCC-------TTTCTT-HHHHHHHHHHHHHTCCSSCCEEEEEGG-----------GGGTT
T ss_pred HHHHHHHCCCCcccEEEeCCCCc-------CCCChH-HHHHHHHHHHHHHHHhCCCCCEEEeec-----------CCcCC
Confidence 23456777888778887633210 011111 1234455555665533 4556666553 13578
Q ss_pred CCCChhhHH-H-HHHHHHHcCCeEEEEEEe
Q 037610 186 AGHHPQEIM-P-LLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 186 i~~~~~e~~-~-~~~~~~~~~l~l~Gih~H 213 (405)
. +..+.. . ++..+-..++...-+|.|
T Consensus 204 ~--~~~~~l~~t~~~~a~~~g~~~~iv~~~ 231 (262)
T 1f6y_A 204 C--QNRPLINRTFLAMAMACGLMSAIADAC 231 (262)
T ss_dssp C--SSHHHHHHHHHHHHHHTTCCEEEECTT
T ss_pred C--CHHHHHHHHHHHHHHHHhCCeEEECcC
Confidence 7 544332 2 222233457776666554
No 86
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=51.68 E-value=61 Score=30.80 Aligned_cols=108 Identities=11% Similarity=0.065 Sum_probs=72.2
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCCeEE--EcCHHHHHHHHhCCCCCCcEEEcCCC
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGSNFD--CGSRSEIEAVLLLDVSPDRIIYANPC 127 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~g~~--vaS~~E~~~a~~~G~~~~~Ii~~gp~ 127 (405)
+.+.-.+.+++++++++ ++.+ .+++|. ...+++.|.+.|+.+| +...+++..+++. .+- .|......
T Consensus 171 ~~~~d~~~v~avR~a~g~~~~l--~vDan~~~~~~~a~~~~~~l~~~~i~iEqP~~~~~~~~~l~~~-~~i-PIa~dE~~ 246 (378)
T 3eez_A 171 DVERDIARIRDVEDIREPGEIV--LYDVNRGWTRQQALRVMRATEDLHVMFEQPGETLDDIAAIRPL-HSA-PVSVDECL 246 (378)
T ss_dssp CHHHHHHHHHHHTTSCCTTCEE--EEECTTCCCHHHHHHHHHHTGGGTCCEECCSSSHHHHHHTGGG-CCC-CEEECTTC
T ss_pred CHHHHHHHHHHHHHHcCCCceE--EEECCCCCCHHHHHHHHHHhccCCeEEecCCCCHHHHHHHHhh-CCC-CEEECCCC
Confidence 35667788888888884 5544 589997 2456777777776555 2355555555443 332 37888888
Q ss_pred CCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEEEE
Q 037610 128 KPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 128 k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~lRi 168 (405)
.+..+++.+++.| +..+++| .+.+..++.+.+....+.+-+
T Consensus 247 ~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~ 293 (378)
T 3eez_A 247 VTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFV 293 (378)
T ss_dssp CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEc
Confidence 8999999999876 5667776 677777877765544444444
No 87
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=51.63 E-value=43 Score=29.59 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=47.4
Q ss_pred cHHHHHHHHHcCC-eEEEcCH-----------HHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCH----
Q 037610 86 EPALLEALAALGS-NFDCGSR-----------SEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSV---- 149 (405)
Q Consensus 86 ~~~vl~~l~~~G~-g~~vaS~-----------~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~---- 149 (405)
..++++.+.+.|+ .+.+... +.++.+++. ++- .++.+|...+.++++.+++.|+..+.+.+.
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~-~~i-pvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l~d 114 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTL-PIIASGGAGKMEHFLEAFLRGADKVSINTAAVEN 114 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGG-CCS-CEEEESCCCSHHHHHHHHHTTCSEECCSHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHh-CCC-CEEEeCCCCCHHHHHHHHHcCCCeeehhhHHhhC
Confidence 3578888888887 5655432 233444443 333 388889899999999999999886666653
Q ss_pred -HHHHHHHhH
Q 037610 150 -EELDKIRNW 158 (405)
Q Consensus 150 -~el~~i~~~ 158 (405)
+.+.++.+.
T Consensus 115 p~~~~~~~~~ 124 (247)
T 3tdn_A 115 PSLITQIAQT 124 (247)
T ss_dssp THHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 335555443
No 88
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=51.17 E-value=85 Score=27.57 Aligned_cols=22 Identities=18% Similarity=0.243 Sum_probs=10.6
Q ss_pred CHHHHHHHHHcCCcEEEecCHH
Q 037610 129 PVSHIKYAASVGVNLTTVDSVE 150 (405)
Q Consensus 129 ~~~~l~~a~~~gv~~i~vds~~ 150 (405)
++++++.+++.|+.-|..|..+
T Consensus 217 ~~~~~~~l~~~GvdgI~TD~p~ 238 (247)
T 2otd_A 217 KPQHAAELLRWGVDCICTDAID 238 (247)
T ss_dssp CHHHHHHHHHHTCSEEEESCTT
T ss_pred CHHHHHHHHHcCCCEEEeCCHH
Confidence 4455555555555444444433
No 89
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=50.39 E-value=1.2e+02 Score=28.30 Aligned_cols=36 Identities=17% Similarity=0.259 Sum_probs=19.6
Q ss_pred eEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHH
Q 037610 99 NFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAAS 138 (405)
Q Consensus 99 g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (405)
-++|-|.+|++.|+++|. +.|.+.+ .++++++++++
T Consensus 235 eVEVdtldea~eAl~aGa--D~I~LDn--~~~~~l~~av~ 270 (320)
T 3paj_A 235 EVETETLAELEEAISAGA--DIIMLDN--FSLEMMREAVK 270 (320)
T ss_dssp EEEESSHHHHHHHHHTTC--SEEEEES--CCHHHHHHHHH
T ss_pred EEEECCHHHHHHHHHcCC--CEEEECC--CCHHHHHHHHH
Confidence 456666666666666654 3344433 24566665543
No 90
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=49.75 E-value=72 Score=29.15 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhcCCCCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcC-------
Q 037610 34 LTEFMQSTILKRQEFDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGS------- 104 (405)
Q Consensus 34 ~~~~~~~~~~~~~~~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS------- 104 (405)
+.++++.+.. ..+. |+-+ ++.+.+++-++. +..+...+-+-..+.+++.+++.|+.+-+.-
T Consensus 78 v~pvi~~l~~---~~~~-piSIDT~~~~va~aAl~a------Ga~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~t 147 (282)
T 1aj0_A 78 VIPVVEAIAQ---RFEV-WISVDTSKPEVIRESAKV------GAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKT 147 (282)
T ss_dssp HHHHHHHHHH---HCCC-EEEEECCCHHHHHHHHHT------TCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTC
T ss_pred HHHHHHHHHh---hcCC-eEEEeCCCHHHHHHHHHc------CCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCcc
Confidence 4455555433 2345 6555 666666655543 4566666665566778888888888655532
Q ss_pred --------------HH----HHHHHHhCCCCCCcEEEc
Q 037610 105 --------------RS----EIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 105 --------------~~----E~~~a~~~G~~~~~Ii~~ 124 (405)
.. -++.+.++|+++++|++-
T Consensus 148 m~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilD 185 (282)
T 1aj0_A 148 MQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLD 185 (282)
T ss_dssp CSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEe
Confidence 12 234566788888788876
No 91
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=49.49 E-value=1.4e+02 Score=27.94 Aligned_cols=92 Identities=8% Similarity=-0.133 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhCCCCceeeeeccCC------------cHHHHHHHHHcCC-eEEEcC---------------HHHHHHHH
Q 037610 61 VVSLYNHMISNLPMIHPHYAVKCNP------------EPALLEALAALGS-NFDCGS---------------RSEIEAVL 112 (405)
Q Consensus 61 l~~n~~~~~~~~~~~~i~yavKaN~------------~~~vl~~l~~~G~-g~~vaS---------------~~E~~~a~ 112 (405)
+.+-++++++.. +..+ .+|-++ ...+++.|.+.|+ .++|.+ ..-+..++
T Consensus 197 ~~eiv~avr~~v-~~pv--~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik 273 (340)
T 3gr7_A 197 LGEVIDAVREVW-DGPL--FVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIR 273 (340)
T ss_dssp HHHHHHHHHHHC-CSCE--EEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCce--EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHH
Confidence 456667777766 3333 344443 3689999999998 888863 12233344
Q ss_pred hCCCCCCcEEEcCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHh
Q 037610 113 LLDVSPDRIIYANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRN 157 (405)
Q Consensus 113 ~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~ 157 (405)
+. ++. .|+.+|...+.++.+.+++.| +..+.+- +.+-..++.+
T Consensus 274 ~~-~~i-PVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 274 RE-ADI-PTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp HH-TTC-CEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred HH-cCC-cEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 43 333 377788888899999999988 6655554 3344445544
No 92
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=49.40 E-value=90 Score=29.07 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=17.0
Q ss_pred CceeeeeccCCcHHHHHHHHHcCCeEEE
Q 037610 75 IHPHYAVKCNPEPALLEALAALGSNFDC 102 (405)
Q Consensus 75 ~~i~yavKaN~~~~vl~~l~~~G~g~~v 102 (405)
..+...+-+-..+.+++.+++.|+.+-+
T Consensus 138 a~iINDVsg~~d~~m~~vaa~~g~~vVl 165 (318)
T 2vp8_A 138 ADLINDTWGGVDPAMPEVAAEFGAGLVC 165 (318)
T ss_dssp CCEEEETTSSSSTTHHHHHHHHTCEEEE
T ss_pred CCEEEECCCCCchHHHHHHHHhCCCEEE
Confidence 4455555554456777777777775444
No 93
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=48.80 E-value=2.1e+02 Score=28.23 Aligned_cols=106 Identities=12% Similarity=0.084 Sum_probs=67.8
Q ss_pred cHHHHHHHHHhhcCCCCCccEEEE-----eHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC--
Q 037610 33 ELTEFMQSTILKRQEFDEVPFYLM-----DLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS-- 104 (405)
Q Consensus 33 ~~~~~~~~~~~~~~~~~t~P~~v~-----d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS-- 104 (405)
...+.++.++. .+- ...++ +.....+.++++++.+|+..+. +|.-...+.++.+.+.|+ ++.|..
T Consensus 255 ~~~~~a~~~~~----aG~-d~v~i~~~~G~~~~~~~~i~~i~~~~~~~pvi--~~~v~t~~~a~~l~~aGad~I~vg~~~ 327 (514)
T 1jcn_A 255 DDKYRLDLLTQ----AGV-DVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVI--GGNVVTAAQAKNLIDAGVDGLRVGMGC 327 (514)
T ss_dssp THHHHHHHHHH----TTC-SEEEECCSCCCSHHHHHHHHHHHHHCTTCEEE--EEEECSHHHHHHHHHHTCSEEEECSSC
T ss_pred hhHHHHHHHHH----cCC-CEEEeeccCCcchhHHHHHHHHHHhCCCCceE--ecccchHHHHHHHHHcCCCEEEECCCC
Confidence 34555555543 344 55555 3345567788888888754443 354466788888999998 776621
Q ss_pred -------------------HHHHHHHHhC-CCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 105 -------------------RSEIEAVLLL-DVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 105 -------------------~~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
..++..+.+. ++ .|+-.|...+..++..|+..|+..+.+-+
T Consensus 328 G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~i---pVia~GGI~~~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 328 GSICITQEVMACGRPQGTAVYKVAEYARRFGV---PIIADGGIQTVGHVVKALALGASTVMMGS 388 (514)
T ss_dssp SCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTC---CEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred CcccccccccCCCccchhHHHHHHHHHhhCCC---CEEEECCCCCHHHHHHHHHcCCCeeeECH
Confidence 2334444332 33 37777888888999999999887666665
No 94
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=47.45 E-value=1.1e+02 Score=28.48 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=10.7
Q ss_pred EEEcCCCCCHHHHHHHHHcCCc
Q 037610 121 IIYANPCKPVSHIKYAASVGVN 142 (405)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gv~ 142 (405)
|+..|...+..++..|+..|..
T Consensus 213 VIa~GGI~~g~Dv~kalalGAd 234 (336)
T 1ypf_A 213 IIADGGIRTNGDVAKSIRFGAT 234 (336)
T ss_dssp EEEESCCCSTHHHHHHHHTTCS
T ss_pred EEEeCCCCCHHHHHHHHHcCCC
Confidence 4444444445555555555544
No 95
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=47.42 E-value=23 Score=32.85 Aligned_cols=102 Identities=18% Similarity=0.220 Sum_probs=58.5
Q ss_pred HHHHHhCC-CCCCcEEEcCCC---CCHHHHHHHHHcCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCC-C-
Q 037610 108 IEAVLLLD-VSPDRIIYANPC---KPVSHIKYAASVGVNLTTVDSVEE------LDKIRNWHPKSDLLIRIKSPDDS-G- 175 (405)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~---k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~~~~~v~lRi~~~~~~-~- 175 (405)
+..+.+.| +++.+++..|.- .++++++.+.+.|+.++..+.+.+ ++++.+......+.|-+..+.-. .
T Consensus 164 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 243 (313)
T 1gq6_A 164 FRHGIDEKLIDPAAMVQIGIRGHNPKPDSLDYARGHGVRVVTADEFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAF 243 (313)
T ss_dssp HHHHHHTTSEEEEEEEEEEECCC------CHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGBCTTT
T ss_pred HHHhhhccCCCCCcEEEEEecCCCCCHHHHHHHHHcCCEEEEHHHHhhcCHHHHHHHHHHHcCCCeEEEEEeecCcCccc
Confidence 45555555 455678877764 367888899999987655554432 22333222244677777655411 0
Q ss_pred -CCCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 176 -AKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 176 -~~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
....+....|+ +..|+.++++.+.. .+++|+..=
T Consensus 244 aPgtgtp~pgGl--t~~e~~~~l~~l~~--~~vvg~Div 278 (313)
T 1gq6_A 244 APGTGTPAPGGL--LSREVLALLRCVGD--LKPVGFDVM 278 (313)
T ss_dssp CCSBSSCCSSCB--CHHHHHHHGGGGGG--SEEEEEEEE
T ss_pred CCCCCCCCCCCC--CHHHHHHHHHHHcc--CCeEEEEEE
Confidence 01223367899 99999998887643 578887554
No 96
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A
Probab=47.04 E-value=96 Score=28.16 Aligned_cols=94 Identities=13% Similarity=0.116 Sum_probs=58.3
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHcCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCCC----CCCCCCC
Q 037610 116 VSPDRIIYANPC-KPVSHIKYAASVGVNLTTVDSVEE------LDKIRNWHPKSDLLIRIKSPDDSGAK----YPLDSKY 184 (405)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~~~~~v~lRi~~~~~~~~~----~~~~srf 184 (405)
+++.++++.|.- .++++.+.+.+.|+.++..+.+.+ ++++.+..+...+.|-+..+.-. .. ..+....
T Consensus 157 ~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~v~~~~~~~l~~~~vylSiDiDvlD-p~~aPgtgtp~pg 235 (290)
T 2ef5_A 157 VDPKDVVLVGVRSLDPGEKRLLKEAGVRVYTMHEVDRLGVARIAEEVLKHLQGLPLHVSLDADVLD-PTLAPGVGTPVPG 235 (290)
T ss_dssp CCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHTTTSCEEEEEEGGGBC-TTTCCCCSSCCSS
T ss_pred cCcccEEEEECCCCCHHHHHHHHHcCCeEEEHHHHHhcCHHHHHHHHHHhcCCCcEEEEEccCCCC-hhhCCCCCCCCCC
Confidence 556778776652 357888888899987655554443 23333333344677777765411 11 1233588
Q ss_pred CCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 185 GAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 185 Gi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
|+ +..|+.++++.+... .+++|+..=
T Consensus 236 Gl--t~~e~~~~l~~l~~~-~~vvg~Div 261 (290)
T 2ef5_A 236 GL--TYREAHLLMEILAES-GRVQSLDLV 261 (290)
T ss_dssp CB--CHHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred CC--CHHHHHHHHHHHHcC-CCEEEEEEE
Confidence 99 999999999987543 357776554
No 97
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=46.93 E-value=1.2e+02 Score=27.66 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCC--eEEEcCHHHHHHHHhCCCCCCcEEEc--CCCCCHHHHHHHHHcCCcEEE
Q 037610 87 PALLEALAALGS--NFDCGSRSEIEAVLLLDVSPDRIIYA--NPCKPVSHIKYAASVGVNLTT 145 (405)
Q Consensus 87 ~~vl~~l~~~G~--g~~vaS~~E~~~a~~~G~~~~~Ii~~--gp~k~~~~l~~a~~~gv~~i~ 145 (405)
.++++.+.+.++ .+|....+.++.++++|. .||.. |-...++-++.+.++|+.++.
T Consensus 70 ~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa---~iINdvsg~~~d~~m~~~~a~~~~~vVl 129 (280)
T 1eye_A 70 IPVVKELAAQGITVSIDTMRADVARAALQNGA---QMVNDVSGGRADPAMGPLLAEADVPWVL 129 (280)
T ss_dssp HHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC---CEEEETTTTSSCTTHHHHHHHHTCCEEE
T ss_pred HHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCCHHHHHHHHHhCCeEEE
Confidence 456666665565 899999999999999986 36654 322356788888899987443
No 98
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=46.65 E-value=1.7e+02 Score=26.50 Aligned_cols=88 Identities=22% Similarity=0.235 Sum_probs=61.3
Q ss_pred EEeHHHHHHHHHHHHHhCCCCcee-eeeccCCcHHHHHHHHHcCC-eEEE-----------cCHHHHHHHHhCCCC-CCc
Q 037610 55 LMDLGVVVSLYNHMISNLPMIHPH-YAVKCNPEPALLEALAALGS-NFDC-----------GSRSEIEAVLLLDVS-PDR 120 (405)
Q Consensus 55 v~d~~~l~~n~~~~~~~~~~~~i~-yavKaN~~~~vl~~l~~~G~-g~~v-----------aS~~E~~~a~~~G~~-~~~ 120 (405)
.-|.....+..+.+.+. ++.++ | +++++.+++.+.+.|+ .+.. .+++-++.+++.-.+ -+
T Consensus 107 ~pD~~~tv~aa~~L~k~--Gf~Vlpy---~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vP- 180 (268)
T 2htm_A 107 LPDPLETLKAAERLIEE--DFLVLPY---MGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPP- 180 (268)
T ss_dssp CCCHHHHHHHHHHHHHT--TCEECCE---ECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSC-
T ss_pred CcCHHHHHHHHHHHHHC--CCEEeec---cCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCe-
Confidence 45666666666666542 55554 3 3578899999999876 4433 456667777772122 23
Q ss_pred EEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 121 IIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
++..|...++++...|.+.|+.-+.|.|
T Consensus 181 VI~~GGI~tpsDAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 181 VVVDAGLGLPSHAAEVMELGLDAVLVNT 208 (268)
T ss_dssp BEEESCCCSHHHHHHHHHTTCCEEEESH
T ss_pred EEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 7778888899999999999987556665
No 99
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=46.55 E-value=63 Score=31.11 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.-.+.++++|+.++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 161 ~~~d~e~v~avR~avG~d~~L--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~~i-PIa~dE 236 (405)
T 3rr1_A 161 VDAAVARVAEIRSAFGNTVEF--GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAETYARLAAH-THL-PIAAGE 236 (405)
T ss_dssp HHHHHHHHHHHHHTTGGGSEE--EEECCSCBCHHHHHHHHHHHGGGCCSCEECSSCCSSTHHHHHHHTT-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHHhCCCceE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhc-CCC-CEEecC
Confidence 4455678888898884 5554 478887 3467788888887 77733 44556655554 333 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
...+..+++.+++.| +..+++| -+.+..++.+.+....+
T Consensus 237 ~i~~~~~~~~~l~~~a~d~v~~d~~~~GGitea~kia~lA~~~gi 281 (405)
T 3rr1_A 237 RMFSRFDFKRVLEAGGVSILQPDLSHAGGITECVKIAAMAEAYDV 281 (405)
T ss_dssp TCCSHHHHHHHHHHCCCSEECCBTTTTTHHHHHHHHHHHHHTTTC
T ss_pred CcCCHHHHHHHHHHhCCCeEEEChhhcCCHHHHHHHHHHHHHcCC
Confidence 788899999998765 5566665 36777888877654443
No 100
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=45.72 E-value=1.4e+02 Score=25.52 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=60.9
Q ss_pred HHHHHHHHhCCCCceeeeeccCCcH-HHHHHHHHcCC-eEEEc--CHHH-HH----HHHhCCCCCCcEE-EcCCCCCHHH
Q 037610 63 SLYNHMISNLPMIHPHYAVKCNPEP-ALLEALAALGS-NFDCG--SRSE-IE----AVLLLDVSPDRII-YANPCKPVSH 132 (405)
Q Consensus 63 ~n~~~~~~~~~~~~i~yavKaN~~~-~vl~~l~~~G~-g~~va--S~~E-~~----~a~~~G~~~~~Ii-~~gp~k~~~~ 132 (405)
+-++++++.+++..++.-+|-...+ ..++.+.+.|+ ++-+- +..| ++ .+++.|... ++ +.||. |.++
T Consensus 48 ~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~--~~d~l~~~-T~~~ 124 (218)
T 3jr2_A 48 KAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI--QIEIYGNW-TMQD 124 (218)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE--EEECCSSC-CHHH
T ss_pred HHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc--ceeeeecC-CHHH
Confidence 4578888887777777788887543 45788889998 66553 2223 22 245567632 33 56774 6788
Q ss_pred HHHHHHcCCcEEEe------------cCHHHHHHHHhH
Q 037610 133 IKYAASVGVNLTTV------------DSVEELDKIRNW 158 (405)
Q Consensus 133 l~~a~~~gv~~i~v------------ds~~el~~i~~~ 158 (405)
++.+.+.|+..+.+ .+.++++++.+.
T Consensus 125 ~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~ 162 (218)
T 3jr2_A 125 AKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQL 162 (218)
T ss_dssp HHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHH
T ss_pred HHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHH
Confidence 99988889875433 255677777765
No 101
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=44.36 E-value=86 Score=30.20 Aligned_cols=100 Identities=12% Similarity=0.047 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.-.+.++++|+.++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~-~~i-PIa~dE 259 (412)
T 4e4u_A 184 LDRCELFCRRVREAVGSKADL--LFGTHGQMVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKH-TSI-PIATGE 259 (412)
T ss_dssp HHHHHHHHHHHHHHHTTSSEE--EECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHT-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhh-CCC-CEEecC
Confidence 5566778888888885 5544 588987 3467788888887 77732 45666666554 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCC
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPK 161 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~ 161 (405)
...+..+++.+++.| +..+++| -+.+..++.+.+..
T Consensus 260 ~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~kia~~A~~ 301 (412)
T 4e4u_A 260 RLTTKYEFHKLLQAGGASILQLNVARVGGLLEAKKIATLAEV 301 (412)
T ss_dssp TCCHHHHHHHHHHTTCCSEECCCTTTTTSHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 777788888888766 4556665 56777777766543
No 102
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=44.21 E-value=2e+02 Score=26.74 Aligned_cols=134 Identities=15% Similarity=0.087 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCC-eEEE-----------------cCHHHHHHHHhCCCCCCcEEEc-CC-CCCHHHHHHHHHcCCcEE-E
Q 037610 87 PALLEALAALGS-NFDC-----------------GSRSEIEAVLLLDVSPDRIIYA-NP-CKPVSHIKYAASVGVNLT-T 145 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~v-----------------aS~~E~~~a~~~G~~~~~Ii~~-gp-~k~~~~l~~a~~~gv~~i-~ 145 (405)
.++++.|.+.|+ .+|+ .+..|........++.-+|... .| .-..+.++.|.+.|+..+ .
T Consensus 33 ~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I 112 (345)
T 1nvm_A 33 RAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRV 112 (345)
T ss_dssp HHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEE
Confidence 467777777777 6777 2455544332223333345544 22 124788999998887632 3
Q ss_pred ecCH---HHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHH
Q 037610 146 VDSV---EELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFA 222 (405)
Q Consensus 146 vds~---~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~ 222 (405)
.++. ++++...+..++..+.++...... +.. +++.+.++++.+...+...+.+.=-.|. ..+.
T Consensus 113 ~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a----------~~~--~~e~~~~ia~~~~~~Ga~~i~l~DT~G~--~~P~ 178 (345)
T 1nvm_A 113 ATHCTEADVSKQHIEYARNLGMDTVGFLMMS----------HMI--PAEKLAEQGKLMESYGATCIYMADSGGA--MSMN 178 (345)
T ss_dssp EEETTCGGGGHHHHHHHHHHTCEEEEEEEST----------TSS--CHHHHHHHHHHHHHHTCSEEEEECTTCC--CCHH
T ss_pred EEeccHHHHHHHHHHHHHHCCCEEEEEEEeC----------CCC--CHHHHHHHHHHHHHCCCCEEEECCCcCc--cCHH
Confidence 3444 344433333333334455543210 234 7778888888777777776666444444 3466
Q ss_pred HHHHHHHHHHHH
Q 037610 223 AFRGAIAAAKAV 234 (405)
Q Consensus 223 ~~~~~i~~~~~~ 234 (405)
.+.+.++.+++.
T Consensus 179 ~v~~lv~~l~~~ 190 (345)
T 1nvm_A 179 DIRDRMRAFKAV 190 (345)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 665555554443
No 103
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=43.69 E-value=1.8e+02 Score=28.75 Aligned_cols=106 Identities=16% Similarity=0.113 Sum_probs=68.7
Q ss_pred HHHHHHHHHhhcCCCCCccEEEEe-----HHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc----
Q 037610 34 LTEFMQSTILKRQEFDEVPFYLMD-----LGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG---- 103 (405)
Q Consensus 34 ~~~~~~~~~~~~~~~~t~P~~v~d-----~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va---- 103 (405)
..+.++.++.. +- .+.++| ...+.+.++++++.+|+..+.. +.-...+.++.+.+.|+ ++.|.
T Consensus 232 ~~~~a~~l~~a----G~-d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~--g~v~t~e~a~~l~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 232 NEERVKALVEA----GV-DVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIG--GNVATAEGARALIEAGVSAVKVGIGPG 304 (496)
T ss_dssp CHHHHHHHHHT----TC-SEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEE--EEECSHHHHHHHHHHTCSEEEECSSCC
T ss_pred hHHHHHHHHhc----cC-ceEEeccccccchHHHHHHHHHHHHCCCceEEE--cccCcHHHHHHHHHhCCCEEEECCCCC
Confidence 34555666532 33 456664 3456688889999888654432 33346678889999998 66653
Q ss_pred C-----------------HHHHHHHH-hCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCH
Q 037610 104 S-----------------RSEIEAVL-LLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSV 149 (405)
Q Consensus 104 S-----------------~~E~~~a~-~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~ 149 (405)
| ..|+..+. +.++ .|+-.|...+.+++..|+..|+..+.+-+.
T Consensus 305 s~~~tr~~~g~g~p~~~~i~~v~~~~~~~~i---PVIa~GGI~~~~di~kala~GAd~V~iGs~ 365 (496)
T 4fxs_A 305 SICTTRIVTGVGVPQITAIADAAGVANEYGI---PVIADGGIRFSGDISKAIAAGASCVMVGSM 365 (496)
T ss_dssp TTBCHHHHHCCCCCHHHHHHHHHHHHGGGTC---CEEEESCCCSHHHHHHHHHTTCSEEEESTT
T ss_pred cCcccccccCCCccHHHHHHHHHHHhccCCC---eEEEeCCCCCHHHHHHHHHcCCCeEEecHH
Confidence 0 12333322 3344 378888888999999999999876677653
No 104
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.39 E-value=51 Score=29.03 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=24.5
Q ss_pred eEEEcCHHHHHHH----HhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHH
Q 037610 99 NFDCGSRSEIEAV----LLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELD 153 (405)
Q Consensus 99 g~~vaS~~E~~~a----~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~ 153 (405)
-+...|.+|++.+ .+.|+ .++..|. --.+.|.++|+..+-+.|.+-++
T Consensus 134 ~~~~~~~ee~~~~i~~l~~~G~---~vVVG~~----~~~~~A~~~Gl~~vlI~s~eSI~ 185 (225)
T 2pju_A 134 QRSYITEEDARGQINELKANGT---EAVVGAG----LITDLAEEAGMTGIFIYSAATVR 185 (225)
T ss_dssp EEEESSHHHHHHHHHHHHHTTC---CEEEESH----HHHHHHHHTTSEEEESSCHHHHH
T ss_pred EEEeCCHHHHHHHHHHHHHCCC---CEEECCH----HHHHHHHHcCCcEEEECCHHHHH
Confidence 4556666665443 33454 2444432 23556666776655566644443
No 105
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A
Probab=43.32 E-value=23 Score=33.24 Aligned_cols=102 Identities=14% Similarity=0.137 Sum_probs=61.1
Q ss_pred HHHHHhCC-CCCCcEEEcCCC---CCHHHHHHHHHcCCcEEEecCHHHH------HHHHhHCCCCeEEEEEecCCCCCC-
Q 037610 108 IEAVLLLD-VSPDRIIYANPC---KPVSHIKYAASVGVNLTTVDSVEEL------DKIRNWHPKSDLLIRIKSPDDSGA- 176 (405)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~---k~~~~l~~a~~~gv~~i~vds~~el------~~i~~~~~~~~v~lRi~~~~~~~~- 176 (405)
+..+++.| +++.+++..|.- .++++++.+.+.|+.++..+.+.+. +++.+......+.|-+..+.-.-+
T Consensus 169 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 248 (326)
T 3niq_A 169 FRRAIEEGLLDPLRTVQIGIRGSVYSPDDDAFARECGIRVIHMEEFVELGVEATLAEARRVVGAGPTYVSFDVDVLDPAF 248 (326)
T ss_dssp HHHHHHTTCEEEEEEEEEEECSCCSCTTSTHHHHHHTCEEEEHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEGGGBCTTT
T ss_pred HHHHHhccCCCCceEEEEeecCCCCCHHHHHHHHHCCCEEEEHHHhhhcCHHHHHHHHHHHhCCCeEEEEEeccccCHhh
Confidence 44455555 345677776653 2567888898999876665554432 223322233467777775541101
Q ss_pred --CCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 177 --KYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 177 --~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
...+....|+ +..|+.++++.+. +.+++|+..=
T Consensus 249 aPgtgtp~pgGl--t~~e~~~~l~~l~--~~~vvg~Div 283 (326)
T 3niq_A 249 APGTGTPEIGGM--TSLQAQQLVRGLR--GLDLVGADVV 283 (326)
T ss_dssp CCCCSSCCSSCB--CHHHHHHHHHTTT--TSCEEEEEEE
T ss_pred CCCCCCCCCCCC--CHHHHHHHHHHHc--CCCEEEEEEE
Confidence 1123367899 9999888888653 4578887654
No 106
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=43.08 E-value=1.4e+02 Score=28.30 Aligned_cols=104 Identities=12% Similarity=0.088 Sum_probs=72.2
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhC-CCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLL-DVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~-G~~~~~Ii~~ 124 (405)
+.+.-.+.++++|+.++. .+-..+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. ++ .|...
T Consensus 176 ~~~~d~~~v~avR~a~g~-~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~d 251 (383)
T 3i4k_A 176 DPAEDTRRVAELAREVGD-RVSLRIDINARWDRRTALHYLPILAEAGVELFEQPTPADDLETLREITRRTNV---SVMAD 251 (383)
T ss_dssp CHHHHHHHHHHHHHTTTT-TSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEESCSCTTCHHHHHHHHHHHCC---EEEES
T ss_pred CHHHHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhhCCC---CEEec
Confidence 567777889999999873 2334689997 3467888888887 77722 24445555443 33 47777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
....+..+++.+++.| +..+++| .+.+..++.+.+....+
T Consensus 252 E~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi 297 (383)
T 3i4k_A 252 ESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGL 297 (383)
T ss_dssp TTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTC
T ss_pred CccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCC
Confidence 7788899999998766 5667777 57888888776544433
No 107
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=42.44 E-value=1.2e+02 Score=25.92 Aligned_cols=79 Identities=15% Similarity=0.237 Sum_probs=47.7
Q ss_pred cHHHHHHHHHcCC-eEEEcCHHHHHHHHhCCCCCCcEE------E-cCCC---CCHHHHHHHHHcCCcEEEecC------
Q 037610 86 EPALLEALAALGS-NFDCGSRSEIEAVLLLDVSPDRII------Y-ANPC---KPVSHIKYAASVGVNLTTVDS------ 148 (405)
Q Consensus 86 ~~~vl~~l~~~G~-g~~vaS~~E~~~a~~~G~~~~~Ii------~-~gp~---k~~~~l~~a~~~gv~~i~vds------ 148 (405)
..++++.+.+.|+ ++.+.+++.++.+++. .+.+ ++ + .++. .+.++++.+++.|+..+++..
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~-~~~p-v~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~~p 102 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRANTKEDILAIKET-VDLP-VIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQRP 102 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEESHHHHHHHHHH-CCSC-EEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSCCS
T ss_pred HHHHHHHHHHCCCeeeccCCHHHHHHHHHh-cCCC-EEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeecccCc
Confidence 3467777778887 8888888888877764 2222 22 1 1111 256788888888887555433
Q ss_pred ---H-HHHHHHHhHCCCCeEEE
Q 037610 149 ---V-EELDKIRNWHPKSDLLI 166 (405)
Q Consensus 149 ---~-~el~~i~~~~~~~~v~l 166 (405)
. +-++.+.+..++..+++
T Consensus 103 ~~~~~~~i~~~~~~~~~~~v~~ 124 (223)
T 1y0e_A 103 KETLDELVSYIRTHAPNVEIMA 124 (223)
T ss_dssp SSCHHHHHHHHHHHCTTSEEEE
T ss_pred ccCHHHHHHHHHHhCCCceEEe
Confidence 2 23455665555555544
No 108
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=42.40 E-value=1.1e+02 Score=27.94 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=66.5
Q ss_pred cHHHHHHHHHcCC-eEEEcCH------HHHHHHHhC-CCCCCcEEEcCCCCCHHHHHHHHHcCCc-EEEecCHHHHHHHH
Q 037610 86 EPALLEALAALGS-NFDCGSR------SEIEAVLLL-DVSPDRIIYANPCKPVSHIKYAASVGVN-LTTVDSVEELDKIR 156 (405)
Q Consensus 86 ~~~vl~~l~~~G~-g~~vaS~------~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~gv~-~i~vds~~el~~i~ 156 (405)
...+++.|.+.|+ |. ..-+ +..+..++- |. +-.+-.+-++.|.+.|.. +..++|.+|.+.+.
T Consensus 110 ~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm--------~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA 180 (286)
T 2p10_A 110 MSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGM--------SYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMA 180 (286)
T ss_dssp HHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTC--------CHHHHHHHHHHHHHTTCEECCEECSHHHHHHHH
T ss_pred HHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCC--------CHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHH
Confidence 3556677777776 55 4444 444444432 21 112335667788889974 45899999999999
Q ss_pred hHCCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHH----HHHHcCCeEEEEEEecCCCCCCHHHHHH
Q 037610 157 NWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLK----AAEASGLSVVGVSFHVGSEATNFAAFRG 226 (405)
Q Consensus 157 ~~~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~----~~~~~~l~l~Gih~H~gs~~~~~~~~~~ 226 (405)
+..++ .|-++++...+..+ |++-.+ +.+++.+.++ .+++.+-++. +-+|-|. +.+++....
T Consensus 181 ~agpD---iI~~h~glT~gglI--G~~~av--s~~~~~e~i~~i~~a~~~vnpdvi-vLc~gGp-IstpeDv~~ 245 (286)
T 2p10_A 181 KAGAD---ILVCHMGLTTGGAI--GARSGK--SMDDCVSLINECIEAARTIRDDII-ILSHGGP-IANPEDARF 245 (286)
T ss_dssp HHTCS---EEEEECSCC-----------CC--CHHHHHHHHHHHHHHHHHHCSCCE-EEEESTT-CCSHHHHHH
T ss_pred HcCCC---EEEECCCCCCCCcc--cCCCcc--cHHHhHHHHHHHHHHHHHhCCCcE-EEecCCC-CCCHHHHHH
Confidence 99886 45577664221111 122234 6666554444 3444343433 4477753 445544433
No 109
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=42.30 E-value=1e+02 Score=29.32 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=69.1
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHH-hCCCCCCcEEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD--CG--SRSEIEAVL-LLDVSPDRIIY 123 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~--va--S~~E~~~a~-~~G~~~~~Ii~ 123 (405)
+.+.-.+.++++++.++ ++.+ .+++|. ...+++.|.+.|+ .+| +. ..+.+..++ +. .+- .|..
T Consensus 177 ~~~~d~~~v~avR~a~g~d~~l--~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~-~~i-PIa~ 252 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGADVEI--LVDANQSLGRHDALAMLRILDEAGCYWFEEPLSIDDIEGHRILRAQG-TPV-RIAT 252 (389)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEE--EEECTTCCCHHHHHHHHHHHHHTTCSEEESCSCTTCHHHHHHHHTTC-CSS-EEEE
T ss_pred CHHHHHHHHHHHHHHcCCCceE--EEECCCCcCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcC-CCC-CEEe
Confidence 46777888999998884 5544 589997 3467888888887 776 22 455666555 33 332 3777
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCC
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPK 161 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~ 161 (405)
.....+.++++.+++.| +..+++| .+.+..++.+.+..
T Consensus 253 dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~ 296 (389)
T 3ozy_A 253 GENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAAS 296 (389)
T ss_dssp CTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 77777888888888765 4555654 57777777766543
No 110
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=41.41 E-value=2e+02 Score=25.89 Aligned_cols=70 Identities=17% Similarity=0.107 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCC-eEEEc--------CHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEe----cCHHHHH
Q 037610 87 PALLEALAALGS-NFDCG--------SRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTV----DSVEELD 153 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~va--------S~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~v----ds~~el~ 153 (405)
..+++...+.|+ ++.|. |.+-+..+++. ++-+ |+..+...++.++..|.+.|+..+.+ -+.++++
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~-v~lP-vl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~ 152 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRAS-VSIP-VLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLV 152 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHH-CSSC-EEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHH
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHh-CCCC-EEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHH
Confidence 468888888898 89986 56667777765 4433 67777777887899999999876555 1456666
Q ss_pred HHHhH
Q 037610 154 KIRNW 158 (405)
Q Consensus 154 ~i~~~ 158 (405)
.+.+.
T Consensus 153 ~l~~~ 157 (272)
T 3qja_A 153 SMLDR 157 (272)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 111
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=41.33 E-value=1.2e+02 Score=29.20 Aligned_cols=99 Identities=14% Similarity=0.035 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc--CHHHHHHHHhCCCCCCcEEEcCCCCC
Q 037610 60 VVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG--SRSEIEAVLLLDVSPDRIIYANPCKP 129 (405)
Q Consensus 60 ~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va--S~~E~~~a~~~G~~~~~Ii~~gp~k~ 129 (405)
...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|.- ..+.+..+++. .+- .|.......+
T Consensus 198 ~~~e~v~avR~avG~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P~~d~~~~~~l~~~-~~i-PIa~dE~~~~ 273 (409)
T 3go2_A 198 NLRAHLEALRDGAGPDVEI--LLDLNFNAKPEGYLKILRELADFDLFWVEIDSYSPQGLAYVRNH-SPH-PISSCETLFG 273 (409)
T ss_dssp HHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHTTTSCCSEEECCCSCHHHHHHHHHT-CSS-CEEECTTCCH
T ss_pred HHHHHHHHHHHHhCCCCEE--EEECCCCCCHHHHHHHHHHHhhcCCeEEEeCcCCHHHHHHHHhh-CCC-CEEeCCCcCC
Confidence 44577888888884 5544 578997 3456777777887 78854 45566666654 332 3777777788
Q ss_pred HHHHHHHHHcC-CcEEEec----CHHHHHHHHhHCCCC
Q 037610 130 VSHIKYAASVG-VNLTTVD----SVEELDKIRNWHPKS 162 (405)
Q Consensus 130 ~~~l~~a~~~g-v~~i~vd----s~~el~~i~~~~~~~ 162 (405)
..+++.+++.| +.++++| -+.+..++.+.+...
T Consensus 274 ~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~ 311 (409)
T 3go2_A 274 IREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAH 311 (409)
T ss_dssp HHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 89999999876 5667776 566777777665433
No 112
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=41.31 E-value=51 Score=30.63 Aligned_cols=102 Identities=11% Similarity=0.191 Sum_probs=61.9
Q ss_pred HHHHHhCC-CCCCcEEEcCCC---CCHHHHHHHHHcCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCC-
Q 037610 108 IEAVLLLD-VSPDRIIYANPC---KPVSHIKYAASVGVNLTTVDSVEE------LDKIRNWHPKSDLLIRIKSPDDSGA- 176 (405)
Q Consensus 108 ~~~a~~~G-~~~~~Ii~~gp~---k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~~~~~v~lRi~~~~~~~~- 176 (405)
+..+.+.| +++++++..|.- .++++.+.+.+.|+.++..+.+.+ ++++.+......+.|-+..+.-.-+
T Consensus 172 ~~~~~~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~ 251 (319)
T 3nio_A 172 FRRAVEEDLLDCDRVVQIGLRAQGYTAEDFNWSRXQGFRVVQAEECWHXSLEPLMAEVREXVGGGPVYLSFDIDGIDPAW 251 (319)
T ss_dssp HHHHHHTTCEEEEEEEEEEECSEESSTHHHHHHHHHTCEEEEGGGTTTCCSHHHHHHHHHHHCSSEEEEEEEGGGBCTTT
T ss_pred HHHHhhccCCCCCcEEEEEeCCCCCCHHHHHHHHhcCcEEEEHHHhhhcCHHHHHHHHHHhcCCCcEEEEEecCccChhh
Confidence 34455554 345677777764 367889999999987666554422 2334333234567777765542101
Q ss_pred --CCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 177 --KYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 177 --~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
...+....|+ +..|+.++++.+. +.+++|+..=
T Consensus 252 aPgtgtp~pgGl--t~~e~~~~l~~l~--~~~vvg~Div 286 (319)
T 3nio_A 252 APGTGTPEIGGL--TTIQAMEIIRGCQ--GLDLIGCDLV 286 (319)
T ss_dssp CCCBSSCCSSCB--CHHHHHHHHHTTT--TSEEEEEEEE
T ss_pred CCCCCCCCCCCC--CHHHHHHHHHHhc--cCCeeEEEEE
Confidence 1123367899 9999888887653 4678887653
No 113
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=41.04 E-value=1.2e+02 Score=28.73 Aligned_cols=100 Identities=8% Similarity=0.112 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+...+.++++++.++ ++.+ .+++|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...+
T Consensus 177 ~~~~~e~v~avR~a~G~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 252 (391)
T 2qgy_A 177 LSISIQFVEKVREIVGDELPL--MLDLAVPEDLDQTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNT-FNM-KVVTGE 252 (391)
T ss_dssp HHHHHHHHHHHHHHHCSSSCE--EEECCCCSCHHHHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHH-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCEE--EEEcCCCCCHHHHHHHHHHHHhcCCCeEeCCCChhhHHHHHHHHhh-CCC-CEEEcC
Confidence 5677788888888874 5554 478886 3467777888887 67632 44555555543 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCC
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPK 161 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~ 161 (405)
...+.++++.+++.| +..++++ .+.+..++.+.+..
T Consensus 253 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~ 294 (391)
T 2qgy_A 253 KQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASN 294 (391)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHH
Confidence 777888888888766 4455553 56677777665543
No 114
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=40.68 E-value=1.2e+02 Score=28.84 Aligned_cols=85 Identities=11% Similarity=0.097 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEc----------------C-----HHHHHHHHhCCC
Q 037610 59 GVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCG----------------S-----RSEIEAVLLLDV 116 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~va----------------S-----~~E~~~a~~~G~ 116 (405)
+.+.+.++++++.+|+..+. ++.-..++.++.+.+.|+ ++.|. . +.|+..+++. .
T Consensus 179 ~~~~e~i~~ir~~~~~~pvi--v~~v~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~ 255 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLI--AGNIVTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNN-T 255 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEE--EEEECSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTT-S
T ss_pred HHHHHHHHHHHHHCCCCeEE--EcCCCcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhh-c
Confidence 45666677777777544433 233345677777777787 66661 0 1122222221 1
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 117 SPDRIIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
+- .|+..|...+.+++..++..|+..+.+-
T Consensus 256 ~i-pVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 256 NI-CIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp SC-EEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred Cc-eEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 21 3666777777788888887777655554
No 115
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=40.35 E-value=1.1e+02 Score=28.97 Aligned_cols=100 Identities=10% Similarity=0.037 Sum_probs=66.2
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+.+...+.+++++++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...
T Consensus 189 ~~~~~~e~v~avR~avg~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~~i-PIa~d 264 (393)
T 2og9_A 189 DGALDIARVTAVRKHLGDAVPL--MVDANQQWDRPTAQRMCRIFEPFNLVWIEEPLDAYDHEGHAALALQ-FDT-PIATG 264 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCE--EEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHH-CSS-CEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEE--EEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHh-CCC-CEEeC
Confidence 45666788888888874 5554 578886 3467777877887 67632 44555555543 222 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCC
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHP 160 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~ 160 (405)
+...+.++++.+++.| +..++++ .+.+..++.+.+.
T Consensus 265 E~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 306 (393)
T 2og9_A 265 EMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAE 306 (393)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHH
Confidence 7777889999998876 4556665 5666677766544
No 116
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=39.69 E-value=1.8e+02 Score=26.37 Aligned_cols=69 Identities=16% Similarity=0.175 Sum_probs=45.6
Q ss_pred CCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccC-CcHHHHHHHHHcCCeEEEcC---------------------
Q 037610 49 DEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCN-PEPALLEALAALGSNFDCGS--------------------- 104 (405)
Q Consensus 49 ~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN-~~~~vl~~l~~~G~g~~vaS--------------------- 104 (405)
+- |+-| ++.+.+++-++. +..+...+-+- ..+.+++.+++.|+.+-+..
T Consensus 80 ~~-piSIDT~~~~va~aAl~a------Ga~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~ 152 (280)
T 1eye_A 80 GI-TVSIDTMRADVARAALQN------GAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAE 152 (280)
T ss_dssp TC-CEEEECSCHHHHHHHHHT------TCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHH
T ss_pred CC-EEEEeCCCHHHHHHHHHc------CCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHH
Confidence 45 6655 666666655543 55677777663 36788888889988665533
Q ss_pred -H----HHHHHHHhCCCCCCcEEEc
Q 037610 105 -R----SEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 105 -~----~E~~~a~~~G~~~~~Ii~~ 124 (405)
. .-++.+.++|+++++|++-
T Consensus 153 v~~~l~~~i~~a~~~Gi~~~~IilD 177 (280)
T 1eye_A 153 VRADLLASVADAVAAGVDPARLVLD 177 (280)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHcCCChhhEEEE
Confidence 1 2245577789988888886
No 117
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=39.46 E-value=2.8e+02 Score=27.05 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC---------------------HHHHHHHHhCCCCC
Q 037610 61 VVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS---------------------RSEIEAVLLLDVSP 118 (405)
Q Consensus 61 l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS---------------------~~E~~~a~~~G~~~ 118 (405)
..+.++++++.+|+..+. ++.-..++-++.+.+.|+ ++.|+. ..++..+++. ..-
T Consensus 265 ~~e~i~~i~~~~p~~pvi--~g~~~t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~i 341 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVV--AGNVATPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK-YDV 341 (494)
T ss_dssp HHHHHHHHHHHCTTSCEE--EEEECSHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT-TTC
T ss_pred HHHHHHHHHHHCCCceEE--eCCcCCHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh-cCC
Confidence 455566666666543332 243345566667777776 555522 1122222221 111
Q ss_pred CcEEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 119 DRIIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 119 ~~Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
.|+..|...+..++..|+..|+..+.+.
T Consensus 342 -pvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 342 -PIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp -CEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred -CEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 2666666677777777777776655554
No 118
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=39.08 E-value=2.2e+02 Score=25.64 Aligned_cols=27 Identities=15% Similarity=0.078 Sum_probs=15.0
Q ss_pred EEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 121 IIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
|+.+|...+.+++..+++.|+..+.+-
T Consensus 244 via~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 244 IIGMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp EEECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 555555555666666666555544443
No 119
>1nrz_A PTS system, sorbose-specific IIB component; beta sheet core, flanking helices, right handed beta-alpha-B crossover, transferase; 1.75A {Klebsiella pneumoniae} SCOP: c.38.1.1
Probab=38.60 E-value=62 Score=27.01 Aligned_cols=81 Identities=16% Similarity=0.197 Sum_probs=45.9
Q ss_pred HHHHHHHcCCeEEEcCHHHHHHHHhCC-CCCCcEEEcCCCCCHHHHHHHHHcCCc--EEEec-----------------C
Q 037610 89 LLEALAALGSNFDCGSRSEIEAVLLLD-VSPDRIIYANPCKPVSHIKYAASVGVN--LTTVD-----------------S 148 (405)
Q Consensus 89 vl~~l~~~G~g~~vaS~~E~~~a~~~G-~~~~~Ii~~gp~k~~~~l~~a~~~gv~--~i~vd-----------------s 148 (405)
+++.....|+.+.+-|.+++....+.+ .+..++++. +++++++..+++.|+. .+++. +
T Consensus 46 ~lk~a~P~gvk~~i~sve~ai~~~~~~~~~~~~v~ll--~k~p~d~~~lve~Gv~i~~iNvG~m~~~~gk~~i~~~v~v~ 123 (164)
T 1nrz_A 46 LLRQAAPPGMKVNVVSLEKAVAVYHNPQYQDETVFYL--FTNPHDVLTMVRQGVQIATLNIGGMAWRPGKKQLTKAVSLD 123 (164)
T ss_dssp HHHHTCCTTCEEEEECHHHHHHHHTCGGGTTCEEEEE--ESSHHHHHHHHTTTCCCSEEEEEEBCCCTTCEEEETTEEEC
T ss_pred HHHhcCCCCCeEEEEEHHHHHHHHhcccCCCceEEEE--ECCHHHHHHHHHcCCCCCEEEECCCcCCCCCeEEeccEeeC
Confidence 334333346667777777776666654 344455443 3456666666666643 24443 3
Q ss_pred HHHHHHHHhHC-CCCeEEEEEecC
Q 037610 149 VEELDKIRNWH-PKSDLLIRIKSP 171 (405)
Q Consensus 149 ~~el~~i~~~~-~~~~v~lRi~~~ 171 (405)
.+|++.+.++. ...++-+|.-|+
T Consensus 124 ~ed~~~lk~L~~~Gv~v~~q~vP~ 147 (164)
T 1nrz_A 124 PQDIQAFRELDKLGVKLDLRVVAS 147 (164)
T ss_dssp HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred HHHHHHHHHHHHCCCEEEEEECcC
Confidence 56777666653 355666666654
No 120
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=38.45 E-value=1.6e+02 Score=25.63 Aligned_cols=96 Identities=6% Similarity=0.059 Sum_probs=60.3
Q ss_pred CCccEEEEeHHHHHHHHHHHHHhCCCCceeeeeccCCc---HHHHHHHHH---cCCeEEEc----C--HHHHHHHHhCCC
Q 037610 49 DEVPFYLMDLGVVVSLYNHMISNLPMIHPHYAVKCNPE---PALLEALAA---LGSNFDCG----S--RSEIEAVLLLDV 116 (405)
Q Consensus 49 ~t~P~~v~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~---~~vl~~l~~---~G~g~~va----S--~~E~~~a~~~G~ 116 (405)
.. .+.+.+.+ ++++++..|+..+.|.+...+. ...++.+.. .++..+.. + ..-++.+.+.|+
T Consensus 126 ~~-~vii~Sf~-----l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~v~~~~~~G~ 199 (234)
T 1o1z_A 126 RK-NLIFSSFD-----LDLLDEKFKGTKYGYLIDEENYGSIENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGI 199 (234)
T ss_dssp CC-SEEEEESC-----HHHHHHHCTTSCEEEECCTTTTCSHHHHHHHHHHHCCSEEEEEGGGGGSHHHHHHHHHHHHTTC
T ss_pred cC-CEEEEchh-----HHHHHhhCCCCcEEEEeccccccCHHHHHHHcCCCCCCEEEeCHHHhcCCccHHHHHHHHHcCC
Confidence 45 67776666 6778888888777777665222 234444443 23333333 3 344567788886
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHH
Q 037610 117 SPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKI 155 (405)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i 155 (405)
. -..++ ..++++++.+++. +.-+..|..+.+.++
T Consensus 200 ~--v~~wT--vn~~~~~~~l~~~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 200 V--IFVWT--LNDPEIYRKIRRE-IDGVITDEVELFVKL 233 (234)
T ss_dssp E--EEEES--CCCHHHHHHHGGG-CSEEEESCHHHHHHT
T ss_pred E--EEEeC--CCCHHHHHHHHHh-CCEEEcCCHHHHhhc
Confidence 2 23343 3478899999998 887888888877643
No 121
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=38.42 E-value=1e+02 Score=29.08 Aligned_cols=99 Identities=15% Similarity=0.073 Sum_probs=66.2
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhC-CCCCCcEEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLL-DVSPDRIIY 123 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~-G~~~~~Ii~ 123 (405)
+.+...+.+++++++++ ++.+ .+++|. ...+++.|.+.|+ .+|-- ..+.+..+++. ++ .|..
T Consensus 173 ~~~~~~e~v~avr~a~G~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PI~~ 247 (371)
T 2ovl_A 173 DLKEDVDRVSALREHLGDSFPL--MVDANMKWTVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGH---TIAG 247 (371)
T ss_dssp SHHHHHHHHHHHHHHHCTTSCE--EEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCS---CEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCC---CEEe
Confidence 55667788888888884 5555 588886 3467777888887 66532 34445444443 33 3777
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCC
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHP 160 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~ 160 (405)
.+...+.++++.+++.| +..++++ .+.+..++.+.+.
T Consensus 248 dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~ 290 (371)
T 2ovl_A 248 GENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAE 290 (371)
T ss_dssp CTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHH
Confidence 77778888888888765 4556665 6777777766543
No 122
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=38.24 E-value=1.5e+02 Score=27.81 Aligned_cols=106 Identities=8% Similarity=0.050 Sum_probs=70.1
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cH-HHHHHHHHcCC-eEE--Ec--CHHHHHHHHhCCCCCCcEEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EP-ALLEALAALGS-NFD--CG--SRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~-~vl~~l~~~G~-g~~--va--S~~E~~~a~~~G~~~~~Ii~ 123 (405)
|.+...+.++++++.++ ++.+ .+++|. .. .+++.|.+.|+ .+| +. ..+.+..+++. .+- .|..
T Consensus 167 ~~~~~~e~v~avr~a~g~~~~l--~vDan~~~~~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PI~~ 242 (369)
T 2p8b_A 167 NVKEDVKRIEAVRERVGNDIAI--RVDVNQGWKNSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSK-TDL-PLMI 242 (369)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEE--EEECTTTTBSHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHT-CCS-CEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHh-CCC-CEEe
Confidence 56777788899998884 5554 689986 23 45666666776 666 22 34445555554 232 3777
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
.....+.++++.+++.| +..++++ .+.+..++.+.+....+.+
T Consensus 243 dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 291 (369)
T 2p8b_A 243 DEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIEC 291 (369)
T ss_dssp STTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcE
Confidence 88888899999998865 5667776 6777777777654444433
No 123
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=38.22 E-value=80 Score=30.17 Aligned_cols=122 Identities=10% Similarity=0.039 Sum_probs=78.1
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEE---EeHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eE
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYL---MDLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NF 100 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v---~d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~ 100 (405)
..+.+.+++.+.+ .+.. +=+ .+.+.-.+.++++|+.++ +..+ .+.+|. ...+++.|.+.|+ .+
T Consensus 157 e~~~~~a~~~~~~--G~~~--iKlK~g~~~~~d~~~v~avR~a~g~~~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~i 230 (392)
T 3ddm_A 157 ENPEDVVARKAAE--GYRA--FKLKVGFDDARDVRNALHVRELLGAATPL--MADANQGWDLPRARQMAQRLGPAQLDWL 230 (392)
T ss_dssp SSHHHHHHHHHHH--TCCC--EEEECSSCHHHHHHHHHHHHHHHCSSSCE--EEECTTCCCHHHHHHHHHHHGGGCCSEE
T ss_pred HHHHHHHHHHHHc--CCCE--EEEecCCCHHHHHHHHHHHHHhcCCCceE--EEeCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 4555566665543 3333 111 146777788899999885 5554 588887 3467788888887 77
Q ss_pred E--EcC---HHHHHHHHhC-CCCCCcEEEcCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 101 D--CGS---RSEIEAVLLL-DVSPDRIIYANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 101 ~--vaS---~~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
| +.. .+.+..+++. ++ .|.......+..+++.+++.| +..+++| .+.+..++.+.+...
T Consensus 231 EeP~~~~d~~~~~~~l~~~~~i---PIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~ 301 (392)
T 3ddm_A 231 EEPLRADRPAAEWAELAQAAPM---PLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAA 301 (392)
T ss_dssp ECCSCTTSCHHHHHHHHHHCSS---CEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHT
T ss_pred ECCCCccchHHHHHHHHHhcCC---CEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHc
Confidence 7 322 5555555543 33 377777788899999998766 4455665 466777777665433
No 124
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=38.10 E-value=1.6e+02 Score=26.55 Aligned_cols=59 Identities=14% Similarity=0.129 Sum_probs=40.0
Q ss_pred cHHHHHHHHHc-CC--eEEEcCHHHHHHHHhC--CCCCCcEEEcCCCCC---HHHHHHHHHcCCcEEEec
Q 037610 86 EPALLEALAAL-GS--NFDCGSRSEIEAVLLL--DVSPDRIIYANPCKP---VSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 86 ~~~vl~~l~~~-G~--g~~vaS~~E~~~a~~~--G~~~~~Ii~~gp~k~---~~~l~~a~~~gv~~i~vd 147 (405)
..++++.+.+. ++ .+|....+.++.++++ |. .|+..-.... ++.+..+.++|+.++...
T Consensus 66 v~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga---~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~ 132 (271)
T 2yci_X 66 MEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGH---AMINSTSADQWKMDIFFPMAKKYEAAIIGLT 132 (271)
T ss_dssp HHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSC---CEEEEECSCHHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCC---CEEEECCCCccccHHHHHHHHHcCCCEEEEe
Confidence 45677777765 64 8999999999999998 64 4665333332 456666778998654433
No 125
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=37.89 E-value=96 Score=29.61 Aligned_cols=102 Identities=10% Similarity=0.031 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcCC
Q 037610 59 GVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
+...+.+++++++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|.....
T Consensus 199 ~~~~e~v~avR~a~G~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~~i-PIa~dE~ 274 (407)
T 2o56_A 199 RLGYDRMAAIRDAVGPDVDI--IAEMHAFTDTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADK-VNI-PLAAGER 274 (407)
T ss_dssp HHHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHH-CCS-CEEECTT
T ss_pred HHHHHHHHHHHHhcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHh-CCC-CEEeCCC
Confidence 445577778888774 4544 488886 3467888888887 77732 45555555543 222 3777777
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
..+.++++.+++.| +..+.++ .+.+..++.+.+....+
T Consensus 275 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~ 318 (407)
T 2o56_A 275 IYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDK 318 (407)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCC
Confidence 77889999999876 4556664 56677777776554433
No 126
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=37.77 E-value=1e+02 Score=27.07 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=10.9
Q ss_pred HHHHHHHHHcCC-eEEEc
Q 037610 87 PALLEALAALGS-NFDCG 103 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~va 103 (405)
...++.+++.|+ ++++.
T Consensus 26 ~~~l~~a~~~G~~~vEl~ 43 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELR 43 (264)
T ss_dssp GGGHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 345666677776 67764
No 127
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=37.47 E-value=1.3e+02 Score=24.55 Aligned_cols=16 Identities=31% Similarity=0.472 Sum_probs=8.1
Q ss_pred HHHHHHHHHcCCeEEE
Q 037610 87 PALLEALAALGSNFDC 102 (405)
Q Consensus 87 ~~vl~~l~~~G~g~~v 102 (405)
.++++.|.+.|..+.+
T Consensus 74 ~e~L~~L~~~G~~v~i 89 (187)
T 2wm8_A 74 PEVLKRLQSLGVPGAA 89 (187)
T ss_dssp HHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCceEEE
Confidence 4455555555553333
No 128
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=37.13 E-value=1.5e+02 Score=28.16 Aligned_cols=131 Identities=14% Similarity=0.260 Sum_probs=72.3
Q ss_pred cHHHHHHHHHcCC-eEEEcCH----HHH---HHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEe-cC--------
Q 037610 86 EPALLEALAALGS-NFDCGSR----SEI---EAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTV-DS-------- 148 (405)
Q Consensus 86 ~~~vl~~l~~~G~-g~~vaS~----~E~---~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~v-ds-------- 148 (405)
-..+++.|.+.|+ .+|+.++ .+. +.+++.+... .++...-+ ..++++.|++.|+..+.+ .+
T Consensus 27 k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~-~v~~~~r~-~~~di~~a~~~g~~~v~i~~~~s~~~~~~ 104 (382)
T 2ztj_A 27 KVEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKA-KVVTHIQC-RLDAAKVAVETGVQGIDLLFGTSKYLRAP 104 (382)
T ss_dssp HHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSS-EEEEEEES-CHHHHHHHHHTTCSEEEEEECC-------
T ss_pred HHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCc-EEEEEccc-ChhhHHHHHHcCCCEEEEEeccCHHHHHH
Confidence 3467777777887 6777554 333 3344445443 23322211 366788888888764433 22
Q ss_pred ----HHH-HHHHH---hHCCCCe--EEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCC
Q 037610 149 ----VEE-LDKIR---NWHPKSD--LLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEA 218 (405)
Q Consensus 149 ----~~e-l~~i~---~~~~~~~--v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~ 218 (405)
.+| ++.+. +..++.. +-+++..... + -. +++.+.++++.+.+. .....|-=..|..
T Consensus 105 ~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~--------~--~~--~~~~~~~~~~~~~~~-a~~i~l~DT~G~~- 170 (382)
T 2ztj_A 105 HGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDT--------F--RS--EEQDLLAVYEAVAPY-VDRVGLADTVGVA- 170 (382)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTT--------T--TS--CHHHHHHHHHHHGGG-CSEEEEEETTSCC-
T ss_pred hCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeC--------C--CC--CHHHHHHHHHHHHHh-cCEEEecCCCCCC-
Confidence 222 23222 2222222 4456654321 2 24 677788888877767 7778887788885
Q ss_pred CCHHHHHHHHHHHHH
Q 037610 219 TNFAAFRGAIAAAKA 233 (405)
Q Consensus 219 ~~~~~~~~~i~~~~~ 233 (405)
.+..+.+.++.+++
T Consensus 171 -~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 171 -TPRQVYALVREVRR 184 (382)
T ss_dssp -CHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHH
Confidence 35555555555444
No 129
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=37.07 E-value=1.8e+02 Score=27.72 Aligned_cols=98 Identities=4% Similarity=0.015 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
++...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l--~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~-~~i-PIa~dE 259 (401)
T 3sbf_A 184 MDNTLTMFKSLREKYGNQFHI--LHDVHERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQ-SSV-SLGLGE 259 (401)
T ss_dssp HHHHHHHHHHHHHHHTTSSEE--EEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTT-CCC-CEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhh-CCC-CEEeCC
Confidence 4556677888898885 5544 589997 3567788888887 67732 33444444443 222 366666
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHC
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWH 159 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~ 159 (405)
...+..+++.+++.| +..+++| .+.+..++.+.+
T Consensus 260 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~kia~~A 299 (401)
T 3sbf_A 260 LFNNPEEWKSLIANRRIDFIRCHVSQIGGITPALKLGHLC 299 (401)
T ss_dssp TCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHH
Confidence 677788888887765 4455555 456666666554
No 130
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=36.88 E-value=1.9e+02 Score=27.02 Aligned_cols=84 Identities=18% Similarity=0.167 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhCC-CCceeeeeccCC------------cHHHHHHHHHcCC-eEEEcC----------------HHHHHH
Q 037610 61 VVSLYNHMISNLP-MIHPHYAVKCNP------------EPALLEALAALGS-NFDCGS----------------RSEIEA 110 (405)
Q Consensus 61 l~~n~~~~~~~~~-~~~i~yavKaN~------------~~~vl~~l~~~G~-g~~vaS----------------~~E~~~ 110 (405)
+.+-++++++..+ +.-+ .+|-++ ...+++.|.+.|+ .++|.. ..-+..
T Consensus 205 ~~eiv~aVR~avG~d~pV--~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ 282 (349)
T 3hgj_A 205 PLQVAQAVREVVPRELPL--FVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADA 282 (349)
T ss_dssp HHHHHHHHHHHSCTTSCE--EEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHH
T ss_pred HHHHHHHHHHHhcCCceE--EEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHH
Confidence 4566778888876 3323 355553 3578899999998 888873 111333
Q ss_pred HHhCCCCCCcEEEcCCCCCHHHHHHHHHcC-CcEEEecC
Q 037610 111 VLLLDVSPDRIIYANPCKPVSHIKYAASVG-VNLTTVDS 148 (405)
Q Consensus 111 a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~vds 148 (405)
+++. ++. .|+.+|...+.++.+.+++.| +..+.+-.
T Consensus 283 ir~~-~~i-PVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR 319 (349)
T 3hgj_A 283 VRKR-VGL-RTGAVGLITTPEQAETLLQAGSADLVLLGR 319 (349)
T ss_dssp HHHH-HCC-EEEECSSCCCHHHHHHHHHTTSCSEEEEST
T ss_pred HHHH-cCc-eEEEECCCCCHHHHHHHHHCCCceEEEecH
Confidence 3332 222 366777777888888888877 66556554
No 131
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=36.55 E-value=1.7e+02 Score=26.76 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=21.0
Q ss_pred EEEcCHHHHHHHHhCCCCC-CcEEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 100 FDCGSRSEIEAVLLLDVSP-DRIIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 100 ~~vaS~~E~~~a~~~G~~~-~~Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
+|-.+++++..+.+. +++ -.|...|.. +.+.++..++.|+..+.+.
T Consensus 234 ld~~~~e~l~~~v~~-~~~~~~I~ASGGI-t~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 234 LDNFNTDQMREAVKR-VNGQARLEVSGNV-TAETLREFAETGVDFISVG 280 (296)
T ss_dssp ESSCCHHHHHHHHHT-TCTTCCEEECCCS-CHHHHHHHHHTTCSEEECS
T ss_pred ECCCCHHHHHHHHHH-hCCCCeEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 444555555554443 221 123334432 5555555555555544443
No 132
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=36.24 E-value=1.9e+02 Score=26.15 Aligned_cols=95 Identities=14% Similarity=0.186 Sum_probs=57.2
Q ss_pred CCCCcEEEcCC-CCCHHHHHHHHHc-CCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCC-CC--CCCCCCCCCCCCCCh
Q 037610 116 VSPDRIIYANP-CKPVSHIKYAASV-GVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDD-SG--AKYPLDSKYGAGHHP 190 (405)
Q Consensus 116 ~~~~~Ii~~gp-~k~~~~l~~a~~~-gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~-~~--~~~~~~srfGi~~~~ 190 (405)
+.+++++..|. ..++++.+.+.+. |+.++..+ ...++.+.+..+...+.|-+..+.- .. ....+....|+ +.
T Consensus 148 ~~~~~i~~iGiR~~~~~e~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~~vylSiDiDvlDpa~aPgtgtp~pgGl--t~ 224 (287)
T 3lhl_A 148 VGDNKIFQFGIRSGTKEEFKFATEEKHTYMEIGG-IDTFENIVNMLNGKNIYLTIDLDVLDASVFPGTGTPEPGGV--NY 224 (287)
T ss_dssp HCTTSEEEEEECBCCHHHHHHHHTSCSSEEEETC-CTTHHHHHHHTTTCEEEEEEEGGGBCTTTCCSBSSCCSSCB--CH
T ss_pred cCcccEEEEEcCCCCHHHHHHHHhcCCCEEEecH-HhHHHHHHHHcCCCcEEEEEecCcCCHhhCCCCCCCCCCCC--CH
Confidence 34566766543 2357788888777 77544444 3344444443344467766665431 10 11223468899 99
Q ss_pred hhHHHHHHHHHHcCCeEEEEEEe
Q 037610 191 QEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 191 ~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
.|+.++++.+.+.+.+++|+..=
T Consensus 225 ~e~~~~l~~l~~~~~~vvg~Div 247 (287)
T 3lhl_A 225 REFQEIFKIIKNSNINIVGCDIV 247 (287)
T ss_dssp HHHTHHHHHHHTSCCEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEEE
Confidence 99999998875445688887654
No 133
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=36.23 E-value=3.1e+02 Score=26.64 Aligned_cols=83 Identities=19% Similarity=0.079 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC------------------H---HHHHHHH-hCCCC
Q 037610 61 VVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS------------------R---SEIEAVL-LLDVS 117 (405)
Q Consensus 61 l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS------------------~---~E~~~a~-~~G~~ 117 (405)
..+.++++++.+|+..+. .+.-.....++.+.+.|+ ++.|.. . .|+..+. ..++
T Consensus 261 ~~~~i~~l~~~~p~~pvi--~G~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~i- 337 (491)
T 1zfj_A 261 VLRKIAEIRAHFPNRTLI--AGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGK- 337 (491)
T ss_dssp HHHHHHHHHHHCSSSCEE--EEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHCCCCcEe--CCCccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCC-
Confidence 445556666655543332 343345666777777777 666642 1 1222211 1233
Q ss_pred CCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 118 PDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 118 ~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
.|+..|...+..++..|+..|+..+.+.+
T Consensus 338 --pvia~GGi~~~~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 338 --TIIADGGIKYSGDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp --EEEEESCCCSHHHHHHHHHTTCSEEEEST
T ss_pred --CEEeeCCCCCHHHHHHHHHcCCcceeeCH
Confidence 37777888888888888888877666654
No 134
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=36.23 E-value=53 Score=32.12 Aligned_cols=88 Identities=16% Similarity=0.288 Sum_probs=0.0
Q ss_pred CCccEEEEeHHHHHHHHHHHHHhCC-CCceeeeeccCC---cHHHHHHHHHcCC---eEEEcCHHH--------------
Q 037610 49 DEVPFYLMDLGVVVSLYNHMISNLP-MIHPHYAVKCNP---EPALLEALAALGS---NFDCGSRSE-------------- 107 (405)
Q Consensus 49 ~t~P~~v~d~~~l~~n~~~~~~~~~-~~~i~yavKaN~---~~~vl~~l~~~G~---g~~vaS~~E-------------- 107 (405)
|| |.++ +.+.+.+-++.+++.++ .-..-..+-+|+ ..+.++.|.+.|+ .+.+-|..+
T Consensus 113 Gt-pt~l-~~~~l~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~ 190 (457)
T 1olt_A 113 GT-PTYL-NKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEF 190 (457)
T ss_dssp SC-GGGS-CHHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHH
T ss_pred CC-cccC-CHHHHHHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHH
Q ss_pred ----HHHHHhCCCC--CCcEEEcCCCCCHHHHHHHHH
Q 037610 108 ----IEAVLLLDVS--PDRIIYANPCKPVSHIKYAAS 138 (405)
Q Consensus 108 ----~~~a~~~G~~--~~~Ii~~gp~k~~~~l~~a~~ 138 (405)
++.++++|+. .-.+++.-|.-+.+++..-++
T Consensus 191 ~~~ai~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~ 227 (457)
T 1olt_A 191 IFALLNHAREIGFTSTNIDLIYGLPKQTPESFAFTLK 227 (457)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEESCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHH
No 135
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=36.00 E-value=1.5e+02 Score=27.76 Aligned_cols=107 Identities=8% Similarity=0.023 Sum_probs=71.2
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcEEEcC
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+.+...+.++++++.++. .+-..+++|. ...+++.|.+.|+ .+|= ...+.+..+++. .+- .|....
T Consensus 170 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~~i-pIa~dE 246 (370)
T 1nu5_A 170 TPAQDLEHIRSIVKAVGD-RASVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQ-NGV-AILADE 246 (370)
T ss_dssp CHHHHHHHHHHHHHHHGG-GCEEEEECTTCCCHHHHHHHHHHHHHHTCCEEECCSCTTCHHHHHHHHHH-CSS-EEEEST
T ss_pred ChHHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCcceEeCCCCcccHHHHHHHHHh-CCC-CEEeCC
Confidence 345567788888887752 2335788887 3467888888887 6662 245555555543 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
...+.++++.+++.| +..++++ .+.+..++.+.+....+.+
T Consensus 247 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 293 (370)
T 1nu5_A 247 SLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISS 293 (370)
T ss_dssp TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEE
T ss_pred CCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcE
Confidence 788899999999876 5567776 6777777776654333333
No 136
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=35.92 E-value=93 Score=28.79 Aligned_cols=88 Identities=16% Similarity=0.115 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhCC--------CCceeeeeccCCc------HHHHHHHHHcCC-eEEEcCH-----------------
Q 037610 58 LGVVVSLYNHMISNLP--------MIHPHYAVKCNPE------PALLEALAALGS-NFDCGSR----------------- 105 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~--------~~~i~yavKaN~~------~~vl~~l~~~G~-g~~vaS~----------------- 105 (405)
.+.+.+-++.+++..+ +.- ..+|-.+. .++++.+.+.|+ ++.|...
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~~~P--v~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~g 264 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHKYVP--IAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTG 264 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCC--EEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSS
T ss_pred HHHHHHHHHHHHHHHHhhhhcccccCc--eEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCC
Confidence 3444555666665441 222 34677663 677899999998 7887521
Q ss_pred ------------HHHHHHHhC-CCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 106 ------------SEIEAVLLL-DVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 106 ------------~E~~~a~~~-G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
.-+..+++. +-+- .|+.+|...+.++...+++.|+..+.+-+
T Consensus 265 g~~g~~~~~~~~~~i~~i~~~~~~~i-pVi~~GGI~~~~da~~~l~~GAd~V~igr 319 (336)
T 1f76_A 265 GLSGRPLQLKSTEIIRRLSLELNGRL-PIIGVGGIDSVIAAREKIAAGASLVQIYS 319 (336)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHHTTSS-CEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred CcCCchhHHHHHHHHHHHHHHhCCCC-CEEEECCCCCHHHHHHHHHCCCCEEEeeH
Confidence 112223332 1012 38888888999999999999987665543
No 137
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=35.68 E-value=68 Score=31.07 Aligned_cols=107 Identities=7% Similarity=0.107 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
++...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 209 ~~~d~e~v~avR~avG~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 284 (424)
T 3v3w_A 209 LNYIPDVFAAVRKEFGPDIHL--LHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQH-TTT-PLAVGE 284 (424)
T ss_dssp HHHHHHHHHHHHHHHCSSSEE--EEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHH-CCS-CEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCcE--EEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhh-CCC-CEEEcc
Confidence 4566778888998885 5544 478887 3567788888887 77733 34555555553 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEEEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~lRi 168 (405)
...+..+++.+++.| +..+++| -+.+..++.+.+....+.+-+
T Consensus 285 ~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 333 (424)
T 3v3w_A 285 VFNSIHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTGF 333 (424)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEEE
T ss_pred CcCCHHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEEe
Confidence 778889999999876 5567776 467778888776555444433
No 138
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=35.19 E-value=2.3e+02 Score=25.51 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=27.3
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHH
Q 037610 189 HPQEIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAK 232 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~ 232 (405)
+++++.++++.+.+.+.....|.--.|. ..+..+.+.++.+.
T Consensus 153 ~~~~~~~~~~~~~~~G~d~i~l~Dt~G~--~~P~~~~~lv~~l~ 194 (295)
T 1ydn_A 153 TPQAVASVTEQLFSLGCHEVSLGDTIGR--GTPDTVAAMLDAVL 194 (295)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEETTSC--CCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEecCCCCC--cCHHHHHHHHHHHH
Confidence 7788888888877778777777644443 45665555444443
No 139
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=34.87 E-value=1.6e+02 Score=27.23 Aligned_cols=32 Identities=28% Similarity=0.383 Sum_probs=22.3
Q ss_pred CCCCCChhhHHHHHHHHHHc-CCeEEEEEEecCCC
Q 037610 184 YGAGHHPQEIMPLLKAAEAS-GLSVVGVSFHVGSE 217 (405)
Q Consensus 184 fGi~~~~~e~~~~~~~~~~~-~l~l~Gih~H~gs~ 217 (405)
.|.- .++++.++++.+++. ++ ..++|+|--.+
T Consensus 166 ~G~~-~P~~~~~lv~~l~~~~~~-~i~~H~Hn~~G 198 (320)
T 3dxi_A 166 FGGI-TPKEVKNLLKEVRKYTHV-PVGFHGHDNLQ 198 (320)
T ss_dssp TSCC-CHHHHHHHHHHHHHHCCS-CEEEECBCTTS
T ss_pred cCCC-CHHHHHHHHHHHHHhCCC-eEEEEeCCCCc
Confidence 4542 678888999887763 54 47788886554
No 140
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=34.86 E-value=79 Score=30.80 Aligned_cols=100 Identities=10% Similarity=0.087 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHh-CCCCCCcEEEc
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLL-LDVSPDRIIYA 124 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~-~G~~~~~Ii~~ 124 (405)
++...+.++++|++++ ++. ..+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++ .++ .|...
T Consensus 223 ~~~d~~~v~avR~a~G~d~~--L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~i---PIa~d 297 (440)
T 3t6c_A 223 AKSIPRLFDHLRNKLGFSVE--LLHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSST---PIAMG 297 (440)
T ss_dssp HHHHHHHHHHHHHHHCSSSE--EEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCS---CEEEC
T ss_pred HHHHHHHHHHHHHhcCCCCe--EEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCC---CEEeC
Confidence 4556778888999885 444 4689997 3466777777887 77732 2344444444 333 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
....+..+++.+++.| +..+++| -+.+..++.+.+...
T Consensus 298 E~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~ 341 (440)
T 3t6c_A 298 ELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPAKKIAIYSELN 341 (440)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHcCCccceeechhhhCCHHHHHHHHHHHHHc
Confidence 7788899999999876 5566666 577877777765433
No 141
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=34.84 E-value=1.5e+02 Score=28.10 Aligned_cols=100 Identities=7% Similarity=-0.020 Sum_probs=65.3
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+.+...+.++++++.++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...
T Consensus 202 ~~~~d~e~v~avR~avG~d~~l--~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~d 277 (398)
T 2pp0_A 202 NCAEDIRRLTAVREALGDEFPL--MVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAA-LDT-PIATG 277 (398)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCE--EEECTTCSCHHHHHHHHHHHGGGTCSCEECCSCTTCHHHHHHHHHH-CSS-CEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCeE--EEECCCCCCHHHHHHHHHHHHHcCCceeeCCCChhhHHHHHHHHhh-CCC-CEEec
Confidence 45666778888888874 5544 578886 3467777777887 67632 44555555443 222 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCC
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHP 160 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~ 160 (405)
....+.++++.+++.| +..++++ .+.+..++.+.+.
T Consensus 278 E~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~ 319 (398)
T 2pp0_A 278 EMLTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAA 319 (398)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHH
Confidence 7777888999988776 4556664 5666666666544
No 142
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=34.71 E-value=1.3e+02 Score=27.08 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=45.8
Q ss_pred cHHHHHHHHHcCC--eEEEcCHHHHHHHHhCCCCCCcEEEcCCC-----CCHHHHHHHHHc---CCcEEE---ecCHHHH
Q 037610 86 EPALLEALAALGS--NFDCGSRSEIEAVLLLDVSPDRIIYANPC-----KPVSHIKYAASV---GVNLTT---VDSVEEL 152 (405)
Q Consensus 86 ~~~vl~~l~~~G~--g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~-----k~~~~l~~a~~~---gv~~i~---vds~~el 152 (405)
...+++...+.|. .++|.+.+|++.+.++|. +.|-+++-. .+.+.+....+. ++.++. |.+.+++
T Consensus 151 l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Ga--d~IGv~~r~l~~~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv 228 (272)
T 3qja_A 151 LVSMLDRTESLGMTALVEVHTEQEADRALKAGA--KVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADL 228 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC--SEEEEESBCTTTCCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHH
T ss_pred HHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCC--CEEEECCCcccccccCHHHHHHHHHhCcccCEEEEECCCCCHHHH
Confidence 3455666677786 789999999999999986 456666421 122344444432 443332 3568888
Q ss_pred HHHHhHC
Q 037610 153 DKIRNWH 159 (405)
Q Consensus 153 ~~i~~~~ 159 (405)
..+.+.+
T Consensus 229 ~~l~~~G 235 (272)
T 3qja_A 229 LAYAGAG 235 (272)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8887754
No 143
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=34.61 E-value=1.5e+02 Score=28.38 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc-----CHHHHHHHHhC-CCCCCcEEE
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG-----SRSEIEAVLLL-DVSPDRIIY 123 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va-----S~~E~~~a~~~-G~~~~~Ii~ 123 (405)
++.-.+.++++|+.++ ++.+ .+-+|. ...+++.|.+.|+ .+|-- ....+..+++. ++ .|..
T Consensus 196 ~~~d~e~v~avR~a~g~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~i---PIa~ 270 (410)
T 3dip_A 196 LKDGLEPFRKIRAAVGQRIEI--MCELHSLWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQTRA---PICG 270 (410)
T ss_dssp HHHHHHHHHHHHHHHTTSSEE--EEECTTCBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCC---CEEE
T ss_pred HHHHHHHHHHHHHHcCCCceE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhCCC---CEEe
Confidence 3455678888998886 4544 578887 3466778888887 78844 45666665553 33 3777
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
.....+..+++.+++.| +.++++| .+.+..++.+.+...
T Consensus 271 dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 315 (410)
T 3dip_A 271 GENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETH 315 (410)
T ss_dssp CTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHT
T ss_pred cCCcCCHHHHHHHHHcCCCCeEeecccccCCHHHHHHHHHHHHHc
Confidence 77778899999998876 4567775 578888777765433
No 144
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=34.26 E-value=1.4e+02 Score=27.53 Aligned_cols=37 Identities=8% Similarity=0.187 Sum_probs=26.7
Q ss_pred CeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHH
Q 037610 98 SNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAAS 138 (405)
Q Consensus 98 ~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (405)
+-++|-|.+|++.|+++|. +.|.+.+ .++++++++++
T Consensus 212 ieVEvdtlde~~eAl~aGa--D~I~LDn--~~~~~l~~av~ 248 (298)
T 3gnn_A 212 VQIEVETLDQLRTALAHGA--RSVLLDN--FTLDMMRDAVR 248 (298)
T ss_dssp CEEEESSHHHHHHHHHTTC--EEEEEES--CCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHcCC--CEEEECC--CCHHHHHHHHH
Confidence 4678888888888888875 4455544 36788887765
No 145
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=33.95 E-value=2.8e+02 Score=26.17 Aligned_cols=106 Identities=9% Similarity=0.082 Sum_probs=71.9
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
+.+.-.+.++++++.+|++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+++..+++. .+- .|....
T Consensus 175 ~~~~d~~~v~avR~a~~~~~l--~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 250 (385)
T 3i6e_A 175 DHAFDIMRLELIARDFPEFRV--RVDYNQGLEIDEAVPRVLDVAQFQPDFIEQPVRAHHFELMARLRGL-TDV-PLLADE 250 (385)
T ss_dssp CHHHHHHHHHHHHHHCTTSEE--EEECTTCCCGGGHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHTT-CSS-CEEEST
T ss_pred CHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHHh-CCC-CEEEeC
Confidence 345667788889988866554 578887 3568888988887 77732 25556655554 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
...+..+++.+++.| +..+++| .+.+..++.+.+....+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~ 297 (385)
T 3i6e_A 251 SVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMA 297 (385)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCEE
Confidence 788899999998765 5567776 5777777777654433333
No 146
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=33.94 E-value=47 Score=29.04 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCC-eEEEcC--HHHHHHHHhCCCCCCcEEEcCCCCCHH--HHHHHHHcCCcEEEec
Q 037610 87 PALLEALAALGS-NFDCGS--RSEIEAVLLLDVSPDRIIYANPCKPVS--HIKYAASVGVNLTTVD 147 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS--~~E~~~a~~~G~~~~~Ii~~gp~k~~~--~l~~a~~~gv~~i~vd 147 (405)
..+++...+.|. |+-|+. +.|+..+++. ++. -+++++.. ..+ .+..+++.|..++++.
T Consensus 118 ~~~a~~a~~~G~~GvV~sat~~~e~~~ir~~-~~~-f~~v~pGI-~~~g~~~~~a~~~Gad~iVvG 180 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAPATRPSMISRVKGD-FPD-KLVISPGV-GTQGAKPGIALCHGADYEIVG 180 (215)
T ss_dssp HHHHHHHHHHCCSEEECCTTSHHHHHHHHHH-CTT-SEEEECCT-TSTTCCTTHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCceeeCCCCHHHHHHHHHh-CCC-cEEEcCCC-CcCcCCHHHHHHcCCCEEEeC
Confidence 567788888898 777665 7899888876 333 45665433 233 5778888898876663
No 147
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=33.81 E-value=32 Score=30.89 Aligned_cols=47 Identities=19% Similarity=0.213 Sum_probs=24.5
Q ss_pred hCCCCCCcEEEcCCCCCHHHHHHHHHcCCcE--EEecCHHHHHHHHhHC
Q 037610 113 LLDVSPDRIIYANPCKPVSHIKYAASVGVNL--TTVDSVEELDKIRNWH 159 (405)
Q Consensus 113 ~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~--i~vds~~el~~i~~~~ 159 (405)
+.|+.+.-+...-...+++.++.+.+.|+.+ .+|++.++++++.+.+
T Consensus 209 ~~~~~~~~i~~~~~~~~~~~v~~~~~~Gl~v~~wTvn~~~~~~~l~~~G 257 (272)
T 3ch0_A 209 KLSFTPAVYSPDVTLVSKKDIDAAHKLGMRVIPWTVNTKEEIETLISLG 257 (272)
T ss_dssp TSSSCCSEEEEBGGGCCHHHHHHHHHTTCEECCBCCCSHHHHHHHHHHT
T ss_pred HcCCCCcEEccchhhcCHHHHHHHHHcCCEEEEeccCCHHHHHHHHHcC
Confidence 3444333333333344566666666666531 3566666666665543
No 148
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=33.69 E-value=2.4e+02 Score=26.70 Aligned_cols=18 Identities=22% Similarity=0.244 Sum_probs=13.2
Q ss_pred hhHHHHHHHHHHcCCeEE
Q 037610 191 QEIMPLLKAAEASGLSVV 208 (405)
Q Consensus 191 ~e~~~~~~~~~~~~l~l~ 208 (405)
.++.++.+.++..++.+.
T Consensus 278 t~~~~i~~~A~~~g~~~~ 295 (397)
T 2qde_A 278 LKAQRWLTLARLANLPVI 295 (397)
T ss_dssp HHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCeEE
Confidence 567778888888888743
No 149
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=33.68 E-value=3e+02 Score=25.78 Aligned_cols=17 Identities=0% Similarity=0.024 Sum_probs=11.3
Q ss_pred EEcCHHHHHHHHhCCCC
Q 037610 101 DCGSRSEIEAVLLLDVS 117 (405)
Q Consensus 101 ~vaS~~E~~~a~~~G~~ 117 (405)
.|.+.++++.+.++|.+
T Consensus 152 ~v~t~e~A~~l~~aGaD 168 (361)
T 3khj_A 152 NVVTEEATKELIENGAD 168 (361)
T ss_dssp EECSHHHHHHHHHTTCS
T ss_pred cCCCHHHHHHHHHcCcC
Confidence 56677777777777663
No 150
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=33.50 E-value=1.5e+02 Score=27.44 Aligned_cols=89 Identities=9% Similarity=0.155 Sum_probs=53.6
Q ss_pred EeHHHHHHHHHHHHHhCC--------CCceeeeeccCC---------cHHHHHHHHHc-CC--eEEEcCHHHHHHHHhCC
Q 037610 56 MDLGVVVSLYNHMISNLP--------MIHPHYAVKCNP---------EPALLEALAAL-GS--NFDCGSRSEIEAVLLLD 115 (405)
Q Consensus 56 ~d~~~l~~n~~~~~~~~~--------~~~i~yavKaN~---------~~~vl~~l~~~-G~--g~~vaS~~E~~~a~~~G 115 (405)
.+.+.+.+..+++.+.=. .+++.+..|.++ ..++++.+.+. ++ .+|....+.++.++++|
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~aG 125 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVNTG 125 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHHcC
Confidence 467777777777665421 133433323332 23566666654 65 89999999999999998
Q ss_pred CCCCcEEEc-CCCCCHHHHHHHHHcCCcEEEec
Q 037610 116 VSPDRIIYA-NPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 116 ~~~~~Ii~~-gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
. .|+-. .....++-++.+.++|+.++...
T Consensus 126 a---~iINDVsg~~~~~m~~v~a~~g~~vVlMh 155 (314)
T 3tr9_A 126 A---DMINDQRALQLDDALTTVSALKTPVCLMH 155 (314)
T ss_dssp C---CEEEETTTTCSTTHHHHHHHHTCCEEEEC
T ss_pred C---CEEEECCCCCchHHHHHHHHhCCeEEEEC
Confidence 5 35543 12224567777888998754443
No 151
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=33.43 E-value=2.3e+02 Score=26.20 Aligned_cols=59 Identities=7% Similarity=-0.079 Sum_probs=36.1
Q ss_pred HHHHHHHHhhcCCCCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccC-CcHHHHHHHHHcCCeEEEc
Q 037610 35 TEFMQSTILKRQEFDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCN-PEPALLEALAALGSNFDCG 103 (405)
Q Consensus 35 ~~~~~~~~~~~~~~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN-~~~~vl~~l~~~G~g~~va 103 (405)
.++|+.+.. ..+- |+-| ++.+.+++-++. +..+...+-+- ..+.+++.+++.|+.+-+.
T Consensus 74 ~pvI~~l~~---~~~v-piSIDT~~~~Va~aAl~a------Ga~iINDVsg~~~d~~m~~v~a~~~~~vvlm 135 (314)
T 2vef_A 74 VPVIKAIRK---ESDV-LISIDTWKSQVAEAALAA------GADLVNDITGLMGDEKMPHVVAEARAQVVIM 135 (314)
T ss_dssp HHHHHHHHH---HCCC-EEEEECSCHHHHHHHHHT------TCCEEEETTTTCSCTTHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHh---hCCc-eEEEeCCCHHHHHHHHHc------CCCEEEECCCCCCChHHHHHHHHcCCCEEEE
Confidence 344444433 2345 6655 666666655543 55677777663 3478889899999876664
No 152
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=33.17 E-value=2.2e+02 Score=25.85 Aligned_cols=100 Identities=14% Similarity=0.106 Sum_probs=58.9
Q ss_pred CCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCe----EEE-------cCHHHHHHHHhC
Q 037610 48 FDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSN----FDC-------GSRSEIEAVLLL 114 (405)
Q Consensus 48 ~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g----~~v-------aS~~E~~~a~~~ 114 (405)
... .+.+ +|.+. ++++++..|++.+.+-+. .+.-+..+...|+. ++. .+.+=+..+.+.
T Consensus 156 ~~~-~vii~Sf~~~~----l~~~~~~~p~~~~~~l~~---~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah~~ 227 (292)
T 3mz2_A 156 AEP-YVMITVHDGAS----ARFFYEKNPNFMFEAFVK---TKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLHER 227 (292)
T ss_dssp CTT-TEEEEESSHHH----HHHHHHHCTTCCEEEECC---SHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHHHT
T ss_pred CCC-CEEEEECCHHH----HHHHHHHCCCCeEEEEeC---CHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHHHC
Confidence 334 5655 44433 355666678776666554 23344555566641 121 123445667778
Q ss_pred CCCCCcEEEcCCCCC--------HHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 115 DVSPDRIIYANPCKP--------VSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 115 G~~~~~Ii~~gp~k~--------~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
|+. -..++-.... .++++.+++.||..|.-|..+.+..+.+
T Consensus 228 G~~--V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P~~l~~~L~ 276 (292)
T 3mz2_A 228 GVM--CMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRPIEVAEAIS 276 (292)
T ss_dssp TBC--EEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCHHHHHHHHG
T ss_pred CCE--EEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCHHHHHHHHH
Confidence 862 2333311111 4588899999999889999999987765
No 153
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=33.16 E-value=2.9e+02 Score=25.42 Aligned_cols=78 Identities=21% Similarity=0.151 Sum_probs=48.2
Q ss_pred eEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 037610 99 NFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKY 178 (405)
Q Consensus 99 g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~ 178 (405)
|.|++++.|++ +.|.. .++..+...+.++.+.++|++.+ .+||..+..
T Consensus 6 g~d~s~~~~~e---~~g~~----~~~~~G~~~~~~~ilk~~G~n~v--------------------Rlri~v~P~----- 53 (334)
T 1fob_A 6 GADISSLLLLE---DEGYS----YKNLNGQTQALETILADAGINSI--------------------RQRVWVNPS----- 53 (334)
T ss_dssp EEECTTHHHHH---HTTCC----CBCTTSCBCCHHHHHHHHTCCEE--------------------EEEECSCCT-----
T ss_pred eeeHHHHHHHH---HcCCE----EECCCCCCchHHHHHHHcCCCEE--------------------EEEEEECCC-----
Confidence 88999988865 45652 34433334456666677777642 235541110
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecC
Q 037610 179 PLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVG 215 (405)
Q Consensus 179 ~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~g 215 (405)
+ |.. +.+...++++++++.|+++. +-+|.+
T Consensus 54 --~---g~~-d~~~~~~~~~~ak~~Gl~v~-ld~hys 83 (334)
T 1fob_A 54 --D---GSY-DLDYNLELAKRVKAAGMSLY-LDLHLS 83 (334)
T ss_dssp --T---CTT-CHHHHHHHHHHHHHTTCEEE-EEECCS
T ss_pred --C---Ccc-CHHHHHHHHHHHHHCCCEEE-EEeccC
Confidence 1 221 66788888998999998865 667763
No 154
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=33.04 E-value=3.2e+02 Score=25.77 Aligned_cols=109 Identities=12% Similarity=0.102 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHcCC-eE--EEcCHHHHHHHHhCCCCCCcEEE-cC-CCCCHHHHHHHHHcCCcEEEecC--------HH
Q 037610 84 NPEPALLEALAALGS-NF--DCGSRSEIEAVLLLDVSPDRIIY-AN-PCKPVSHIKYAASVGVNLTTVDS--------VE 150 (405)
Q Consensus 84 N~~~~vl~~l~~~G~-g~--~vaS~~E~~~a~~~G~~~~~Ii~-~g-p~k~~~~l~~a~~~gv~~i~vds--------~~ 150 (405)
-....++..+.+.|. |+ .-.|++|+....+. .. ..+.+ .| +....+.++.+++.|+..+++|. .+
T Consensus 53 vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i~~-~~-~~~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e 130 (361)
T 3r2g_A 53 ITESNMANFMHSKGAMGALHRFMTIEENIQEFKK-CK-GPVFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGK 130 (361)
T ss_dssp TCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHHHT-CC-SCCBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHH
T ss_pred chHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHhh-cc-eEEEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHH
Confidence 346788888888874 21 11467777655443 11 11222 22 22235677778899998888863 24
Q ss_pred HHHHHHhHCCCCeEEEE-EecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCC
Q 037610 151 ELDKIRNWHPKSDLLIR-IKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSE 217 (405)
Q Consensus 151 el~~i~~~~~~~~v~lR-i~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~ 217 (405)
.++.+.+..++..+... + . +.+++..+ .+.+.+.+-+..|.|+.
T Consensus 131 ~I~~ir~~~~~~~Vi~G~V-----------------~--T~e~A~~a----~~aGaD~I~Vg~g~G~~ 175 (361)
T 3r2g_A 131 TLKSLRQLLGSRCIMAGNV-----------------A--TYAGADYL----ASCGADIIKAGIGGGSV 175 (361)
T ss_dssp HHHHHHHHHTTCEEEEEEE-----------------C--SHHHHHHH----HHTTCSEEEECCSSSSC
T ss_pred HHHHHHHhcCCCeEEEcCc-----------------C--CHHHHHHH----HHcCCCEEEEcCCCCcC
Confidence 55666665556666653 2 2 55555444 34577766666676664
No 155
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=33.01 E-value=1.8e+02 Score=27.53 Aligned_cols=39 Identities=15% Similarity=0.080 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS 98 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~ 98 (405)
.+.-.+.++++|+.++ ++.+ .+.+|. ...+++.|.+.|+
T Consensus 196 ~~~d~~~v~avR~a~G~~~~l--~vDaN~~~~~~~A~~~~~~l~~~~i 241 (383)
T 3toy_A 196 LATDEAMIKGLRALLGPDIAL--MLDFNQSLDPAEATRRIARLADYDL 241 (383)
T ss_dssp HHHHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHhCCCCeE--EEeCCCCCCHHHHHHHHHHHHhhCC
Confidence 3444455555555552 3332 355554 1234444444454
No 156
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=32.99 E-value=70 Score=30.67 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHHhCCCCCCcEEEcCC
Q 037610 59 GVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD--CG--SRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~--va--S~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
+.-.+.++++|+.++ ++.+ .+-+|. ...+++.|.+.|+ .+| +. ..+.+..+++. .+- .|.....
T Consensus 194 ~~d~~~v~avR~a~g~~~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~-~~i-PIa~dE~ 269 (400)
T 4dxk_A 194 KSALEPFEKIRKAVGDKMDI--MVEFHSMWQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAV-SPA-PISASET 269 (400)
T ss_dssp HHHHHHHHHHHHHHGGGSEE--EEECTTCBCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHH-CSS-CEEECTT
T ss_pred HHHHHHHHHHHHHcCCCceE--EEECCCCCCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHh-CCC-CEEecCC
Confidence 345667888888886 4444 578887 3466777888887 777 32 34455555543 222 3777777
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
..+..+++.+++.| +..+++| -+.+..++.+.+...
T Consensus 270 ~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~~kia~~A~~~ 311 (400)
T 4dxk_A 270 LGSRWAFRDLLETGAAGVVMLDISWCGGLSEARKIASMAEAW 311 (400)
T ss_dssp CCHHHHHHHHHHTTCCCEEEECTTTTTHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 77888888888876 4567776 467777777665433
No 157
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=32.90 E-value=1.3e+02 Score=27.64 Aligned_cols=56 Identities=23% Similarity=0.259 Sum_probs=41.3
Q ss_pred cHHHHHHHHHcCC--eEEEcCHHHHHHHHhCCCCCCcEEEc--CCCCCHHHHHHHHHcCCcEEE
Q 037610 86 EPALLEALAALGS--NFDCGSRSEIEAVLLLDVSPDRIIYA--NPCKPVSHIKYAASVGVNLTT 145 (405)
Q Consensus 86 ~~~vl~~l~~~G~--g~~vaS~~E~~~a~~~G~~~~~Ii~~--gp~k~~~~l~~a~~~gv~~i~ 145 (405)
..++++.+.+.++ .+|....+.++.++++|.+ |+.. |- ..++-++.+.++|+.++.
T Consensus 92 v~pvI~~l~~~~vpiSIDT~~~~Va~aAl~aGa~---iINdVsg~-~d~~m~~v~a~~~~~vVl 151 (294)
T 2dqw_A 92 LLPVLEAVLSLGVPVSVDTRKPEVAEEALKLGAH---LLNDVTGL-RDERMVALAARHGVAAVV 151 (294)
T ss_dssp HHHHHHHHHTTCSCEEEECSCHHHHHHHHHHTCS---EEECSSCS-CCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHhCCCeEEEECCCHHHHHHHHHhCCC---EEEECCCC-CChHHHHHHHHhCCCEEE
Confidence 3456666665564 8999999999999999863 6643 33 567888888899986443
No 158
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=32.81 E-value=53 Score=31.77 Aligned_cols=105 Identities=10% Similarity=0.044 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
++...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 203 ~~~d~~~v~avR~a~G~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 278 (418)
T 3r4e_A 203 LNYVPKLFEELRKTYGFDHHL--LHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQH-TVT-PLAVGE 278 (418)
T ss_dssp HHHHHHHHHHHHHHHCSSSEE--EEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHH-CCS-CEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCeE--EEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhc-CCC-CEEEcC
Confidence 3556677888998885 5544 578997 3567788888887 67632 34455555543 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
...+..+++.+++.| +..+++| -+.+..++.+++....+.+
T Consensus 279 ~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 325 (418)
T 3r4e_A 279 IFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRT 325 (418)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEE
T ss_pred CcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEE
Confidence 778889999999876 5567776 4677777777654444433
No 159
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=32.08 E-value=62 Score=30.43 Aligned_cols=103 Identities=12% Similarity=0.009 Sum_probs=70.2
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEE--c--CHHHHHHHHhC-CCCCCcEEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDC--G--SRSEIEAVLLL-DVSPDRIIY 123 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~v--a--S~~E~~~a~~~-G~~~~~Ii~ 123 (405)
+.+.-.+.++++++.++ ++. ..+.+|. ...+++.|.+.|+ .+|= . ..+.+..+++. ++ .|..
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~--l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~ 240 (356)
T 3ro6_B 166 DEEQDFERLRRLHETLAGRAV--VRVDPNQSYDRDGLLRLDRLVQELGIEFIEQPFPAGRTDWLRALPKAIRR---RIAA 240 (356)
T ss_dssp CHHHHHHHHHHHHHHHTTSSE--EEEECTTCCCHHHHHHHHHHHHHTTCCCEECCSCTTCHHHHHTSCHHHHH---TEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCE--EEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCCCCcHHHHHHHHhcCCC---CEEe
Confidence 56677788899999884 544 4588987 3467888888887 7772 2 34444433322 23 3777
Q ss_pred cCCCCCHHHHHHHHHcC--CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 124 ANPCKPVSHIKYAASVG--VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g--v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
.....+..+++.+++.+ +..+++| .+.+..++.+.+....+
T Consensus 241 dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi 288 (356)
T 3ro6_B 241 DESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAGI 288 (356)
T ss_dssp STTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHTC
T ss_pred CCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcCC
Confidence 88888899999999865 6677776 57777777776543333
No 160
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=31.94 E-value=2.1e+02 Score=27.03 Aligned_cols=104 Identities=10% Similarity=0.007 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD--CG--SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~--va--S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.-.+.++++++.++ ++. ..+.+|. ...+++.|.+.|+ .+| +. ..+++..+++. .+- .|...-
T Consensus 177 ~~~d~~~v~avR~a~g~~~~--l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-pIa~dE 252 (382)
T 3dgb_A 177 VDRDLAHVIAIKKALGDSAS--VRVDVNQAWDEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNAS-SPA-PIMADE 252 (382)
T ss_dssp HHHHHHHHHHHHHHHGGGSE--EEEECTTCBCHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHH-CSS-CEEEST
T ss_pred HHHHHHHHHHHHHHcCCCCe--EEEeCCCCCCHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHh-CCC-CEEeCC
Confidence 4556677888888886 444 4588987 3467888888887 777 43 56666666654 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLL 165 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~ 165 (405)
...+..+++.+++.+ +..+++| .+.+..++.+.+....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~ 298 (382)
T 3dgb_A 253 SIECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIG 298 (382)
T ss_dssp TCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCE
T ss_pred CcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCe
Confidence 778899999998755 5667776 677888777765433333
No 161
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=31.94 E-value=1.5e+02 Score=28.33 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=27.9
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD 101 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~ 101 (405)
+.+.-.+.++++|+.++ ++.+ .+.+|. ...+++.|.+.|+ .+|
T Consensus 173 ~~~~d~~~v~avR~a~g~~~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iE 223 (393)
T 4dwd_A 173 DIPGDIAKARAVRELLGPDAVI--GFDANNGYSVGGAIRVGRALEDLGYSWFE 223 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCE--EEECTTCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHhhCCCEEE
Confidence 55666777888888774 4444 478886 2355666666666 555
No 162
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=31.92 E-value=3.3e+02 Score=25.68 Aligned_cols=63 Identities=16% Similarity=0.272 Sum_probs=36.3
Q ss_pred EEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEecCCCCCCH-HHH-----HHHHHHHHHHHHHHH
Q 037610 166 IRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFHVGSEATNF-AAF-----RGAIAAAKAVFDTAA 239 (405)
Q Consensus 166 lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~-~~~-----~~~i~~~~~~~~~~~ 239 (405)
+||||+. +| ..+.+.++++.+++.++- ..|-.--||-..+. +.| ...++.+.+.++.++
T Consensus 109 lRINPGN-----------ig---~~~~~~~vv~~ak~~~~p-iRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e 173 (366)
T 3noy_A 109 IRINPGN-----------IG---KEEIVREIVEEAKRRGVA-VRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFE 173 (366)
T ss_dssp EEECHHH-----------HS---CHHHHHHHHHHHHHHTCE-EEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred EEECCcc-----------cC---chhHHHHHHHHHHHcCCC-EEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 8888853 23 356777888888777654 33556666632111 111 123455556666777
Q ss_pred hCCC
Q 037610 240 RTSN 243 (405)
Q Consensus 240 ~~G~ 243 (405)
++|+
T Consensus 174 ~~gf 177 (366)
T 3noy_A 174 KWGF 177 (366)
T ss_dssp HTTC
T ss_pred hCCC
Confidence 7776
No 163
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=31.90 E-value=2.1e+02 Score=26.02 Aligned_cols=94 Identities=6% Similarity=0.035 Sum_probs=56.8
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHcCCcEEEecCHHH------HHHHHh-HC--CCCeEEEEEecCCCCCCC----CCCC
Q 037610 116 VSPDRIIYANPC-KPVSHIKYAASVGVNLTTVDSVEE------LDKIRN-WH--PKSDLLIRIKSPDDSGAK----YPLD 181 (405)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~-~~--~~~~v~lRi~~~~~~~~~----~~~~ 181 (405)
++++++++.|.- .++++.+.+.+.|+.++..+.+.+ ++++.+ +. ....+.|-+..+.-. .. ..+.
T Consensus 165 ~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~~~~~~~vylSiDiDvlD-p~~aPgtgtp 243 (306)
T 1pq3_A 165 ISSASIVYIGLRDVDPPEHFILKNYDIQYFSMRDIDRLGIQKVMERTFDLLIGKRQRPIHLSFDIDAFD-PTLAPATGTP 243 (306)
T ss_dssp SCGGGEEEESCCCCCHHHHHHHHHTTCEEECHHHHHHHCHHHHHHHHHHHHHSSSCCCEEEEEEGGGBC-TTTCCSBSSC
T ss_pred CCcccEEEEEcCCCCHHHHHHHHHcCCeEEEhHHHhhhCHHHHHHHHHHHHhhcCCCeEEEEEecCCcC-ccccCCCCCC
Confidence 356678877762 357888888899986544443332 122222 21 233577777655411 11 1233
Q ss_pred CCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 182 SKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 182 srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
...|+ +..|+.++++.+... .+++|+..=
T Consensus 244 ~pgGl--t~~e~~~~l~~l~~~-~~vvg~Div 272 (306)
T 1pq3_A 244 VVGGL--TYREGMYIAEEIHNT-GLLSALDLV 272 (306)
T ss_dssp CSSCB--CHHHHHHHHHHHHTT-TCEEEEEEE
T ss_pred CCCCC--CHHHHHHHHHHHHcC-CCEEEEEEE
Confidence 67899 999999999887543 357886554
No 164
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=31.79 E-value=88 Score=29.00 Aligned_cols=83 Identities=11% Similarity=0.145 Sum_probs=53.5
Q ss_pred HHHHHHHhhcCCCCCccEEE-------EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCH---
Q 037610 36 EFMQSTILKRQEFDEVPFYL-------MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSR--- 105 (405)
Q Consensus 36 ~~~~~~~~~~~~~~t~P~~v-------~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~--- 105 (405)
++++.+.. ..+- |+-| ++.+.+++-++.- ..+--+..++-....+.+++.+.++|+.+-+.+.
T Consensus 112 ~vV~~v~~---~~~v-plsI~DT~~~~~~~~V~eaal~ag---a~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~dv 184 (310)
T 2h9a_B 112 EVCKAVAD---AIDV-PLMIIGCGVEEKDAEIFPVIGEAL---SGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPLDI 184 (310)
T ss_dssp HHHHHHHH---HCSS-CEEEECCSCHHHHHHHHHHHHHHT---TTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSSCH
T ss_pred HHHHHHHH---hCCc-eEEEECCCCCCCCHHHHHHHHHhC---CCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChhHH
Confidence 35555543 2466 8877 4444444444331 1112266777776788999999999997777664
Q ss_pred ---HH-HHHHHhCCCCCCcEEEcC
Q 037610 106 ---SE-IEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 106 ---~E-~~~a~~~G~~~~~Ii~~g 125 (405)
.| ++.+.++|+++++|++..
T Consensus 185 ~~l~~~~~~a~~~Gi~~e~IilDP 208 (310)
T 2h9a_B 185 NLSKQLNIMIMEMNLAPNRIIMDP 208 (310)
T ss_dssp HHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHCCCChhhEEEeC
Confidence 22 345777899999999863
No 165
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=31.71 E-value=2.8e+02 Score=25.81 Aligned_cols=87 Identities=15% Similarity=0.136 Sum_probs=53.3
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccC----------CcHHHHHHHHHcCC-eEEEcCH------------------HH
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCN----------PEPALLEALAALGS-NFDCGSR------------------SE 107 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN----------~~~~vl~~l~~~G~-g~~vaS~------------------~E 107 (405)
+.+.+.+-++++++.. ++.+ .+|.. ....+++.+.+.|+ .+.|... .+
T Consensus 110 ~~~~~~eiv~av~~~v-~~PV--~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~ 186 (350)
T 3b0p_A 110 DLARVREILKAMGEAV-RVPV--TVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHD 186 (350)
T ss_dssp CHHHHHHHHHHHHHHC-SSCE--EEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHH
T ss_pred CHHHHHHHHHHHHHHh-CCce--EEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHH
Confidence 4566777788888765 2323 23331 13578899999998 7777641 11
Q ss_pred -HHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 108 -IEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 108 -~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
+..+++. ++.-.|+.+|...+.+++..+++ |+..+.+-+
T Consensus 187 ~i~~ik~~-~~~iPVianGgI~s~eda~~~l~-GaD~V~iGR 226 (350)
T 3b0p_A 187 WVHRLKGD-FPQLTFVTNGGIRSLEEALFHLK-RVDGVMLGR 226 (350)
T ss_dssp HHHHHHHH-CTTSEEEEESSCCSHHHHHHHHT-TSSEEEECH
T ss_pred HHHHHHHh-CCCCeEEEECCcCCHHHHHHHHh-CCCEEEECH
Confidence 2233332 31124777888788888888887 776555553
No 166
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=31.64 E-value=2.7e+02 Score=25.06 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=54.4
Q ss_pred cCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHH----HHcCCc-EEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCC
Q 037610 103 GSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYA----ASVGVN-LTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAK 177 (405)
Q Consensus 103 aS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a----~~~gv~-~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~ 177 (405)
.+..++..++.+|.+ .|++.....+.++++.. .+.|.. ++-+.+.+|+++..+...+ .|-+|.-.
T Consensus 130 ~d~~qi~ea~~~GAD--~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~---iIGinnr~----- 199 (272)
T 3tsm_A 130 FDPYQVYEARSWGAD--CILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSR---LLGVNNRN----- 199 (272)
T ss_dssp CSTHHHHHHHHTTCS--EEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCS---EEEEECBC-----
T ss_pred CCHHHHHHHHHcCCC--EEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCC---EEEECCCC-----
Confidence 556678889999984 46666666677665554 467865 4578999999887766543 44555211
Q ss_pred CCCCCCCCCCCChhhHHHHHHHH
Q 037610 178 YPLDSKYGAGHHPQEIMPLLKAA 200 (405)
Q Consensus 178 ~~~~srfGi~~~~~e~~~~~~~~ 200 (405)
...|++ +.+...++.+.+
T Consensus 200 ---l~t~~~--dl~~~~~L~~~i 217 (272)
T 3tsm_A 200 ---LRSFEV--NLAVSERLAKMA 217 (272)
T ss_dssp ---TTTCCB--CTHHHHHHHHHS
T ss_pred ---CccCCC--ChHHHHHHHHhC
Confidence 145777 667666666543
No 167
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=31.45 E-value=1.6e+02 Score=28.01 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=71.4
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEEc--CHHHHHHHHhC-CCCCCcEEEcCC
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDCG--SRSEIEAVLLL-DVSPDRIIYANP 126 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va--S~~E~~~a~~~-G~~~~~Ii~~gp 126 (405)
+.+.=.+.++++++.+|++.+ .+-+|. ...+++.|.+.|+ .+|=- ..+.+..+++. ++ .|...-.
T Consensus 195 ~~~~d~~~v~avR~~~~~~~l--~vDaN~~w~~~~A~~~~~~l~~~~i~~iEqP~~d~~~~~~l~~~~~i---PIa~dE~ 269 (398)
T 4dye_A 195 DCAGDVAILRAVREALPGVNL--RVDPNAAWSVPDSVRAGIALEELDLEYLEDPCVGIEGMAQVKAKVRI---PLCTNMC 269 (398)
T ss_dssp CHHHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHHGGGCCSEEECCSSHHHHHHHHHHHCCS---CEEESSS
T ss_pred CHHHHHHHHHHHHHhCCCCeE--EeeCCCCCCHHHHHHHHHHHhhcCCCEEcCCCCCHHHHHHHHhhCCC---CEEeCCc
Confidence 556667888899998876554 588887 3466777888887 77643 34445444443 33 3676666
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEEEE
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~lRi 168 (405)
..+..+++.+++.| +..+++| .+.+..++.+.+....+.+-+
T Consensus 270 ~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~ 317 (398)
T 4dye_A 270 VVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNL 317 (398)
T ss_dssp CCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 77888999998876 5667777 577877777765433333333
No 168
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=31.31 E-value=3.1e+02 Score=25.68 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhC-CCCCCcEEEc
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLL-DVSPDRIIYA 124 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~-G~~~~~Ii~~ 124 (405)
.+.-.+.++++++.++ +..+ .+.+|. ...+++.|.+.|+ .+|-- ..+++..+++. ++ .|...
T Consensus 174 ~~~d~~~v~avR~~~g~~~~l--~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---pIa~d 248 (377)
T 3my9_A 174 HAEELRILETMRGEFGERIDL--RLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAALDT---PILAD 248 (377)
T ss_dssp HHHHHHHHHHHHHHHGGGSEE--EEECTTCCCTTTHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHHHCSS---CEEES
T ss_pred HHHHHHHHHHHHHHhCCCCeE--EEeCCCCcCHHHHHHHHHHHhhcCCCEEECCCCccCHHHHHHHHHhCCC---CEEEC
Confidence 4555677888888874 4444 578886 3467888888886 66621 23444444432 22 25555
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD 147 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd 147 (405)
....+..+++.+++.| +..+++|
T Consensus 249 E~~~~~~~~~~~i~~~~~d~v~~k 272 (377)
T 3my9_A 249 ESCFDAVDLMEVVRRQAADAISVK 272 (377)
T ss_dssp TTCSSHHHHHHHHHHTCCSEEECC
T ss_pred CccCCHHHHHHHHHcCCCCEEEec
Confidence 5556666666666544 3344444
No 169
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=31.26 E-value=2e+02 Score=26.86 Aligned_cols=100 Identities=9% Similarity=0.132 Sum_probs=67.1
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHH--cCC-eEE--E--cCHHHHHHHHhCCCCCCcEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAA--LGS-NFD--C--GSRSEIEAVLLLDVSPDRII 122 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~--~G~-g~~--v--aS~~E~~~a~~~G~~~~~Ii 122 (405)
+.+.-.+.++++++.++ ++. ..+++|. ...+++.|.+ .|+ .+| + ...+.+..+++. .+- .|.
T Consensus 167 ~~~~d~~~v~avr~a~g~~~~--l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-pIa 242 (366)
T 1tkk_A 167 DIATDIARIQEIRKRVGSAVK--LRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDA-TDT-PIM 242 (366)
T ss_dssp CHHHHHHHHHHHHHHHCSSSE--EEEECTTCSCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHH-CSS-CEE
T ss_pred CHHHHHHHHHHHHHHhCCCCe--EEEECCCCCCHHHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhh-CCC-CEE
Confidence 56667788888888874 444 4688987 3467888888 776 565 2 244555555543 222 377
Q ss_pred EcCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCC
Q 037610 123 YANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHP 160 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~ 160 (405)
......+.++++.+++.+ +..++++ .+.+..++.+.+.
T Consensus 243 ~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~ 286 (366)
T 1tkk_A 243 ADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAE 286 (366)
T ss_dssp ECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHH
Confidence 777777888999888755 5567776 6777777766554
No 170
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=31.06 E-value=2.7e+02 Score=24.36 Aligned_cols=101 Identities=9% Similarity=0.009 Sum_probs=61.7
Q ss_pred cEEEEeHHHHHHHHHHHHHhCCCCceeeee-ccCC--cHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcEEE
Q 037610 52 PFYLMDLGVVVSLYNHMISNLPMIHPHYAV-KCNP--EPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRIIY 123 (405)
Q Consensus 52 P~~v~d~~~l~~n~~~~~~~~~~~~i~yav-KaN~--~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~Ii~ 123 (405)
.+++.+.+ ...++.+++..|++.+.|-+ .... ....+..+.+.|+ ++.+ .+..-++.+.+.|+. -..+
T Consensus 143 ~v~i~Sf~--~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~G~~--v~~w 218 (258)
T 2o55_A 143 RVDYCSFH--HEALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKEQVCTAHEKGLS--VTVW 218 (258)
T ss_dssp GEEEEESS--HHHHHHHHHHCTTCEEEEECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGCCHHHHHHHHHTTCE--EEEE
T ss_pred CEEEEeCC--HHHHHHHHHHCCCCcEEEEEeCCCCCCHHHHHHHHHhcCCeEEecChhhcCHHHHHHHHHCCCE--EEEe
Confidence 56664432 12345667777877766666 3221 1123333555665 3332 356667888888872 2344
Q ss_pred cC-C-CCCHHHHHHHHHcCCcEEEecCHHHHHHHH
Q 037610 124 AN-P-CKPVSHIKYAASVGVNLTTVDSVEELDKIR 156 (405)
Q Consensus 124 ~g-p-~k~~~~l~~a~~~gv~~i~vds~~el~~i~ 156 (405)
+- + ..++++++.+++.|+.-|..|..+.+..+.
T Consensus 219 Tv~~~~n~~~~~~~l~~~GvdgI~TD~p~~~~~~l 253 (258)
T 2o55_A 219 MPWIFDDSEEDWKKCLELQVDLICSNYPFGLMNFL 253 (258)
T ss_dssp CCTTCCCCHHHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred eCCCCCCCHHHHHHHHHcCCCEEEeCCHHHHHHHH
Confidence 32 0 047899999999999878889998887654
No 171
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=30.98 E-value=67 Score=29.67 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=44.0
Q ss_pred HHHHHHHhCC--CCceeeeeccCC-cHHHHHHHHHcCCe----------E--------EEcCHHHHHH-HHhCCCCCCcE
Q 037610 64 LYNHMISNLP--MIHPHYAVKCNP-EPALLEALAALGSN----------F--------DCGSRSEIEA-VLLLDVSPDRI 121 (405)
Q Consensus 64 n~~~~~~~~~--~~~i~yavKaN~-~~~vl~~l~~~G~g----------~--------~vaS~~E~~~-a~~~G~~~~~I 121 (405)
.-+++.+... +++++-.=|+-| ...+.|.....|-| + .+.|+.++.. +++. .+..+|
T Consensus 132 ~T~~~v~~~~~~~~~i~dTRKT~PGlR~lekyAV~~GGg~nHR~gL~D~vLIKdNHi~~~G~i~~Av~~ar~~-~p~~kI 210 (300)
T 3l0g_A 132 ITRQFVDEVSGTKVKIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKN-LKNEYI 210 (300)
T ss_dssp HHHHHHHHTTTSSCEEECCSCCCTTCHHHHHHHHHHTTCBCSCSSTTSCEEECHHHHHHHSCHHHHHHHHHHH-SSSCCE
T ss_pred HHHHHHHHhCCCCEEEeecCccChhhhHHHHHHHHhcCCcccccCCcceEEEcHhHHHHhCCHHHHHHHHHHh-CCCCCE
Confidence 3444444443 355666666666 33444444443311 1 1235555433 3333 222334
Q ss_pred EEcCCCCCHHHHHHHHHcCCcEEEecCH--HHHHHH
Q 037610 122 IYANPCKPVSHIKYAASVGVNLTTVDSV--EELDKI 155 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~gv~~i~vds~--~el~~i 155 (405)
..- +-+.+|+++|++.|+..+-+|++ +++++.
T Consensus 211 eVE--v~tl~e~~eAl~aGaDiImLDn~s~~~l~~a 244 (300)
T 3l0g_A 211 AIE--CDNISQVEESLSNNVDMILLDNMSISEIKKA 244 (300)
T ss_dssp EEE--ESSHHHHHHHHHTTCSEEEEESCCHHHHHHH
T ss_pred EEE--ECCHHHHHHHHHcCCCEEEECCCCHHHHHHH
Confidence 442 23567777777777776666665 344433
No 172
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=30.94 E-value=1.7e+02 Score=27.89 Aligned_cols=103 Identities=11% Similarity=0.028 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+...+.+++++++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 201 ~~~~~e~v~avR~a~G~d~~l--~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~~i-PIa~dE 276 (410)
T 2gl5_A 201 LKMGEARIAAMREAMGDDADI--IVEIHSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRS-TTI-PIATGE 276 (410)
T ss_dssp HHHHHHHHHHHHHHHCSSSEE--EEECTTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHH-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHhcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhh-CCC-CEEecC
Confidence 3445677888888774 5544 478886 3467777877887 66632 45555555543 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
...+.++++.+++.+ +..+.++ .+.+..++.+.+....+
T Consensus 277 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi 321 (410)
T 2gl5_A 277 RSYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDT 321 (410)
T ss_dssp TCCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTC
T ss_pred CcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCC
Confidence 777889999999876 4556665 47777777776554433
No 173
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=30.76 E-value=68 Score=24.33 Aligned_cols=42 Identities=7% Similarity=0.077 Sum_probs=33.0
Q ss_pred HHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHH
Q 037610 111 VLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDK 154 (405)
Q Consensus 111 a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~ 154 (405)
+.+.|++++++++-|-. ..++..|.+.|+..+.+.+..+...
T Consensus 84 ~~~~~~~~~~~~~vgD~--~~di~~a~~~G~~~i~~~~~~~~~~ 125 (137)
T 2pr7_A 84 ADAIDLPMRDCVLVDDS--ILNVRGAVEAGLVGVYYQQFDRAVV 125 (137)
T ss_dssp HHHTTCCGGGEEEEESC--HHHHHHHHHHTCEEEECSCHHHHHH
T ss_pred HHHcCCCcccEEEEcCC--HHHHHHHHHCCCEEEEeCChHHHHH
Confidence 45578888889988874 6789999999998778888776553
No 174
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=30.73 E-value=2e+02 Score=26.04 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=41.2
Q ss_pred HHHHHHHHHc-CC--eEEEcCHHHHHHHHhCCCCCCcEEEcCC-CCCHHHHHHHHHcCCcEEE
Q 037610 87 PALLEALAAL-GS--NFDCGSRSEIEAVLLLDVSPDRIIYANP-CKPVSHIKYAASVGVNLTT 145 (405)
Q Consensus 87 ~~vl~~l~~~-G~--g~~vaS~~E~~~a~~~G~~~~~Ii~~gp-~k~~~~l~~a~~~gv~~i~ 145 (405)
.++++.+.+. ++ .+|....+.++.++++|. .|+..-. ...++-++.+.++|+.++.
T Consensus 79 ~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa---~iINdvsg~~d~~~~~~~a~~~~~vVl 138 (282)
T 1aj0_A 79 IPVVEAIAQRFEVWISVDTSKPEVIRESAKVGA---HIINDIRSLSEPGALEAAAETGLPVCL 138 (282)
T ss_dssp HHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTC---CEEEETTTTCSTTHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCHHHHHHHHHhCCeEEE
Confidence 5667777654 65 899999999999999986 3665322 2567788888899987443
No 175
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=30.50 E-value=2e+02 Score=25.21 Aligned_cols=60 Identities=18% Similarity=0.106 Sum_probs=37.3
Q ss_pred HHHHHHHHHcCC-eEEEcC-----------HHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC
Q 037610 87 PALLEALAALGS-NFDCGS-----------RSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS-----------~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds 148 (405)
.++++.+.+.|+ .+.+.. .+.++.+++. .+-+ ++..|...+.++++.+++.|+..+.+.+
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~-~~iP-vi~~ggi~~~~~i~~~~~~Gad~v~lg~ 104 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLP-IIASGGAGKMEHFLEAFLAGADKALAAS 104 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGG-CCSC-EEEESCCCSTHHHHHHHHHTCSEEECCC
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHh-cCCC-EEEECCCCCHHHHHHHHHcCCcHhhhhH
Confidence 455666666665 455443 3344444443 3333 7777777788999999999887555553
No 176
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=30.30 E-value=3.3e+02 Score=25.14 Aligned_cols=80 Identities=11% Similarity=0.013 Sum_probs=44.8
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+.+...+.++++++.++ ++.+ .+++|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...
T Consensus 171 ~~~~~~e~v~avr~a~g~~~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~~i-PI~~d 246 (359)
T 1mdl_A 171 ALDQDLAVVRSIRQAVGDDFGI--MVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSK-LNV-PVQMG 246 (359)
T ss_dssp SHHHHHHHHHHHHHHHCSSSEE--EEECTTCSCHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHT-CSS-CEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCEE--EEECCCCCCHHHHHHHHHHHHHhCCCeEECCCChhhHHHHHHHHHh-CCC-CEEeC
Confidence 45666777888888774 4444 578886 2456677777776 55521 23334433332 221 25555
Q ss_pred CCCCCHHHHHHHHHcC
Q 037610 125 NPCKPVSHIKYAASVG 140 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g 140 (405)
+...+.++++.+++.|
T Consensus 247 e~~~~~~~~~~~i~~~ 262 (359)
T 1mdl_A 247 ENWLGPEEMFKALSIG 262 (359)
T ss_dssp TTCCSHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHcC
Confidence 5555566666665544
No 177
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=30.27 E-value=1.2e+02 Score=26.42 Aligned_cols=48 Identities=10% Similarity=0.055 Sum_probs=25.2
Q ss_pred HHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 037610 195 PLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 195 ~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G 242 (405)
++.+.+++.++.+.++|....-...+.....+.++.+.+.++.+..+|
T Consensus 50 ~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (278)
T 1i60_A 50 DLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG 97 (278)
T ss_dssp HHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 344445566777777666542111244444455556666666555544
No 178
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=30.17 E-value=2.8e+02 Score=26.14 Aligned_cols=55 Identities=9% Similarity=0.115 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCCCCcEEEc-CCCCCHHH---HHHHHHc--CCcEE--EecCHHHHHHHHhHCCC
Q 037610 105 RSEIEAVLLLDVSPDRIIYA-NPCKPVSH---IKYAASV--GVNLT--TVDSVEELDKIRNWHPK 161 (405)
Q Consensus 105 ~~E~~~a~~~G~~~~~Ii~~-gp~k~~~~---l~~a~~~--gv~~i--~vds~~el~~i~~~~~~ 161 (405)
.+.++.+.++|++ -|.++ ....++.. ++.+.+. ++.++ ++.+.++++++.+.+-+
T Consensus 110 ~~~~~~lieaGvd--~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD 172 (366)
T 4fo4_A 110 EERVKALVEAGVD--VLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVS 172 (366)
T ss_dssp HHHHHHHHHTTCS--EEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHHHhCCCC--EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCC
Confidence 4556666777653 34442 22223322 3333333 54332 47788888877776543
No 179
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=29.63 E-value=1.8e+02 Score=27.07 Aligned_cols=107 Identities=14% Similarity=0.141 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+.-.+.++++++.++ ++. ..+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 166 ~~~d~~~v~avR~a~g~~~~--l~vDan~~~~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 241 (354)
T 3jva_A 166 IEADIARVKAIREAVGFDIK--LRLDANQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQ-VNT-TIMADE 241 (354)
T ss_dssp HHHHHHHHHHHHHHHCTTSE--EEEECTTCSCHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHHHH-CSS-EEEEST
T ss_pred HHHHHHHHHHHHHHcCCCCe--EEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHHh-CCC-CEEEcC
Confidence 3555677888888884 544 4688887 2356677777776 66622 45566665543 222 477778
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEEEE
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~lRi 168 (405)
...+..+++.+++.| +..+++| .+.+..++.+.+....+.+-+
T Consensus 242 ~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~ 290 (354)
T 3jva_A 242 SCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMI 290 (354)
T ss_dssp TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred CcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEe
Confidence 888899999998754 5677887 778888887765444443333
No 180
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=29.57 E-value=3.3e+02 Score=25.40 Aligned_cols=43 Identities=16% Similarity=0.104 Sum_probs=25.3
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFD 101 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~ 101 (405)
+.+...+.+++++++++ ++.+ .+++|. ...+++.|.+.|+ .+|
T Consensus 182 ~~~~~~e~v~avr~a~g~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iE 232 (382)
T 1rvk_A 182 DVKMDLKACAAVREAVGPDIRL--MIDAFHWYSRTDALALGRGLEKLGFDWIE 232 (382)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEE--EEECCTTCCHHHHHHHHHHHHTTTCSEEE
T ss_pred chHHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHhcCCCEEe
Confidence 45566677777777764 4444 477775 2345555555555 443
No 181
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=29.44 E-value=2.4e+02 Score=25.82 Aligned_cols=95 Identities=12% Similarity=0.037 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhcCCCCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCH------
Q 037610 34 LTEFMQSTILKRQEFDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSR------ 105 (405)
Q Consensus 34 ~~~~~~~~~~~~~~~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~------ 105 (405)
+.++++.+.. . +- |+-| ++.+.+++-++. +..+...+-+-..+.+++.+++.|+.+-+...
T Consensus 86 v~pvi~~l~~---~-~v-piSIDT~~~~Va~aAl~a------Ga~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~t 154 (294)
T 2y5s_A 86 VIPLVEALRP---L-NV-PLSIDTYKPAVMRAALAA------GADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQT 154 (294)
T ss_dssp HHHHHHHHGG---G-CS-CEEEECCCHHHHHHHHHH------TCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTT
T ss_pred HHHHHHHHhh---C-CC-eEEEECCCHHHHHHHHHc------CCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCcc
Q ss_pred --------------------HHHHHHHhCCCCCCcEEEc---CCCCCH-HHHHHHHHc
Q 037610 106 --------------------SEIEAVLLLDVSPDRIIYA---NPCKPV-SHIKYAASV 139 (405)
Q Consensus 106 --------------------~E~~~a~~~G~~~~~Ii~~---gp~k~~-~~l~~a~~~ 139 (405)
.-++.+.++|+++++|++- |..|+. ++=...++.
T Consensus 155 m~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~kt~~~~n~~ll~~ 212 (294)
T 2y5s_A 155 MQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAA 212 (294)
T ss_dssp TEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSSCTTHHHHHHHHT
T ss_pred ccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCcccccchHHHHHHHHH
No 182
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=29.07 E-value=2.6e+02 Score=26.20 Aligned_cols=19 Identities=11% Similarity=-0.066 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHHcCCeEE
Q 037610 190 PQEIMPLLKAAEASGLSVV 208 (405)
Q Consensus 190 ~~e~~~~~~~~~~~~l~l~ 208 (405)
..++.++.+.++..++.+.
T Consensus 274 it~~~~i~~~A~~~g~~~~ 292 (379)
T 2rdx_A 274 LSKARRTRDFLIDNRMPVV 292 (379)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCCeEE
Confidence 3677788888888888743
No 183
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=28.91 E-value=82 Score=27.88 Aligned_cols=137 Identities=12% Similarity=0.100 Sum_probs=79.9
Q ss_pred CcHHHHHHHHHhhcCCCCCccEEEEeHH--HHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcC---HH
Q 037610 32 DELTEFMQSTILKRQEFDEVPFYLMDLG--VVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGS---RS 106 (405)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~t~P~~v~d~~--~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS---~~ 106 (405)
.+..++++.++. -|= ++..+... .-.+.++++++.+|+..+-+- +--+..=++.+.+.|+.|-|+- .+
T Consensus 46 ~~a~~~a~al~~----gGi-~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaG--TVlt~~~a~~Ai~AGA~fIvsP~~~~~ 118 (232)
T 4e38_A 46 EDIIPLGKVLAE----NGL-PAAEITFRSDAAVEAIRLLRQAQPEMLIGAG--TILNGEQALAAKEAGATFVVSPGFNPN 118 (232)
T ss_dssp GGHHHHHHHHHH----TTC-CEEEEETTSTTHHHHHHHHHHHCTTCEEEEE--CCCSHHHHHHHHHHTCSEEECSSCCHH
T ss_pred HHHHHHHHHHHH----CCC-CEEEEeCCCCCHHHHHHHHHHhCCCCEEeEC--CcCCHHHHHHHHHcCCCEEEeCCCCHH
Confidence 566667777664 344 66666432 334677888888875433322 2224666788888898777643 23
Q ss_pred HHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecC------HHHHHHHHhHCCCCeEEEEEecCCCCCCCCCC
Q 037610 107 EIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDS------VEELDKIRNWHPKSDLLIRIKSPDDSGAKYPL 180 (405)
Q Consensus 107 E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds------~~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~ 180 (405)
=++.+++.|+ .++-| +.|++|+..|.+.|..++-+-- .+.|+.+....++. ++-+- |
T Consensus 119 vi~~~~~~gi----~~ipG-v~TptEi~~A~~~Gad~vK~FPa~~~gG~~~lkal~~p~p~i----p~~pt---G----- 181 (232)
T 4e38_A 119 TVRACQEIGI----DIVPG-VNNPSTVEAALEMGLTTLKFFPAEASGGISMVKSLVGPYGDI----RLMPT---G----- 181 (232)
T ss_dssp HHHHHHHHTC----EEECE-ECSHHHHHHHHHTTCCEEEECSTTTTTHHHHHHHHHTTCTTC----EEEEB---S-----
T ss_pred HHHHHHHcCC----CEEcC-CCCHHHHHHHHHcCCCEEEECcCccccCHHHHHHHHHHhcCC----CeeeE---c-----
Confidence 3344555554 34444 4589999999999987543321 23444444333332 33221 1
Q ss_pred CCCCCCCCChhhHHHHHH
Q 037610 181 DSKYGAGHHPQEIMPLLK 198 (405)
Q Consensus 181 ~srfGi~~~~~e~~~~~~ 198 (405)
|+ +++++.+.++
T Consensus 182 ----GI--~~~n~~~~l~ 193 (232)
T 4e38_A 182 ----GI--TPSNIDNYLA 193 (232)
T ss_dssp ----SC--CTTTHHHHHT
T ss_pred ----CC--CHHHHHHHHH
Confidence 78 8888777764
No 184
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=28.87 E-value=2.8e+02 Score=26.18 Aligned_cols=13 Identities=8% Similarity=-0.054 Sum_probs=6.5
Q ss_pred ecCHHHHHHHHhH
Q 037610 146 VDSVEELDKIRNW 158 (405)
Q Consensus 146 vds~~el~~i~~~ 158 (405)
+-+.++++++.+.
T Consensus 219 i~t~e~a~~~~~~ 231 (393)
T 2qr6_A 219 VNDYTTALHMMRT 231 (393)
T ss_dssp CCSHHHHHHHHTT
T ss_pred cCCHHHHHHHHHc
Confidence 3455555555443
No 185
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=28.64 E-value=60 Score=30.04 Aligned_cols=58 Identities=12% Similarity=0.008 Sum_probs=36.7
Q ss_pred HHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCH----------HHHHHHHHcCCcEEEec
Q 037610 89 LLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPV----------SHIKYAASVGVNLTTVD 147 (405)
Q Consensus 89 vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~----------~~l~~a~~~gv~~i~vd 147 (405)
+++...+.|+.--|+|..|+..+++. +++.-+++++..... ..+..+++.|..++++.
T Consensus 163 lA~~a~~~G~dGvV~s~~E~~~IR~~-~~~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~aGAd~iVvG 230 (303)
T 3ru6_A 163 FSKISYENGLDGMVCSVFESKKIKEH-TSSNFLTLTPGIRPFGETNDDQKRVANLAMARENLSDYIVVG 230 (303)
T ss_dssp HHHHHHHTTCSEEECCTTTHHHHHHH-SCTTSEEEECCCCTTC--------CCSHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEECHHHHHHHHHh-CCCccEEECCCcCcccCCcccccccCCHHHHHHcCCCEEEEC
Confidence 34455567885567799999888875 444446666433211 14667788888776664
No 186
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=28.58 E-value=1.3e+02 Score=28.65 Aligned_cols=99 Identities=7% Similarity=-0.011 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcCC
Q 037610 59 GVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
+...+.++++++.++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|.....
T Consensus 193 ~~~~e~v~avr~avG~d~~l--~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~-~~i-PIa~dE~ 268 (403)
T 2ox4_A 193 KIGVERVEAIRNAVGPDVDI--IVENHGHTDLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKK-IDI-PLASGER 268 (403)
T ss_dssp HHHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHT-CCS-CEEECTT
T ss_pred HHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHh-CCC-CEEecCC
Confidence 445577778888774 4544 488887 3467777877887 66632 34555555554 332 3777777
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCC
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPK 161 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~ 161 (405)
..+.++++.+++.| +..+.++ .+.+..++.+.+..
T Consensus 269 ~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~ 309 (403)
T 2ox4_A 269 IYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHI 309 (403)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHH
Confidence 77889999999876 4556665 45566666665543
No 187
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=28.45 E-value=89 Score=27.44 Aligned_cols=52 Identities=6% Similarity=-0.100 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 037610 192 EIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 192 e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
.+.+.++.++..+...+.+++|.++.....+.+.+.++.+.++.+.+++.|+
T Consensus 85 ~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 136 (281)
T 3u0h_A 85 LLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGM 136 (281)
T ss_dssp THHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCC
Confidence 4455666677778777776666654432335566677777777777777665
No 188
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=28.37 E-value=2.5e+02 Score=26.56 Aligned_cols=82 Identities=10% Similarity=0.019 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhCCCCceeeeeccCC---------------cHHHHHHHHHcCC-eEEEcCH--------HHHHHHHhCCC
Q 037610 61 VVSLYNHMISNLPMIHPHYAVKCNP---------------EPALLEALAALGS-NFDCGSR--------SEIEAVLLLDV 116 (405)
Q Consensus 61 l~~n~~~~~~~~~~~~i~yavKaN~---------------~~~vl~~l~~~G~-g~~vaS~--------~E~~~a~~~G~ 116 (405)
+.+-++++++..+.-. -.+|-++ ...+++.|.+.|+ .+++... .++..+++. +
T Consensus 230 ~~eiv~aVr~avg~~~--v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~-~ 306 (379)
T 3aty_A 230 IYDVTKSVCDAVGSDR--VGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGS-Y 306 (379)
T ss_dssp HHHHHHHHHHHHCGGG--EEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTT-C
T ss_pred HHHHHHHHHHhcCCCe--EEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHH-C
Confidence 4455667777665222 3455433 3578899999998 8888762 135555554 4
Q ss_pred CCCcEEEcCCCCCHHHHHHHHHcC-CcEEEec
Q 037610 117 SPDRIIYANPCKPVSHIKYAASVG-VNLTTVD 147 (405)
Q Consensus 117 ~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~vd 147 (405)
+.+ |+.+|.. +.++.+.+++.| +..+.+-
T Consensus 307 ~iP-vi~~G~i-t~~~a~~~l~~g~aD~V~ig 336 (379)
T 3aty_A 307 SGV-KISNLRY-DFEEADQQIREGKVDAVAFG 336 (379)
T ss_dssp CSC-EEEESSC-CHHHHHHHHHTTSCSEEEES
T ss_pred CCc-EEEECCC-CHHHHHHHHHcCCCeEEEec
Confidence 443 7777777 899999999987 6655554
No 189
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=28.36 E-value=1e+02 Score=26.83 Aligned_cols=50 Identities=20% Similarity=0.137 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 037610 193 IMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 193 ~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G 242 (405)
+.++.+.+++.++.+.+++.+..-...+.+...+.++.+.+.++.+..+|
T Consensus 47 ~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG 96 (275)
T 3qc0_A 47 LGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELG 96 (275)
T ss_dssp HHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 34444445556777766665422112345555556666666666666554
No 190
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=28.01 E-value=3.6e+02 Score=25.32 Aligned_cols=25 Identities=12% Similarity=-0.011 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCC
Q 037610 59 GVVVSLYNHMISNLP-MIHPHYAVKCNP 85 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~-~~~i~yavKaN~ 85 (405)
+.-.+.++++++.++ ++.+ .+.+|.
T Consensus 194 ~~~~e~v~avr~a~g~~~~l--~vDan~ 219 (392)
T 1tzz_A 194 EEDRMRIEAVLEEIGKDAQL--AVDANG 219 (392)
T ss_dssp HHHHHHHHHHHHHHTTTCEE--EEECTT
T ss_pred HHHHHHHHHHHHhcCCCCeE--EEECCC
Confidence 344455555555553 3333 255554
No 191
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=27.80 E-value=2.2e+02 Score=26.34 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=57.0
Q ss_pred CCCCcEEEcCC-CCCHHHHHHHHHcCCcEEEecCHHH------HHHHHhH-CCCCeEEEEEecCCC-CC--CCCCCCCCC
Q 037610 116 VSPDRIIYANP-CKPVSHIKYAASVGVNLTTVDSVEE------LDKIRNW-HPKSDLLIRIKSPDD-SG--AKYPLDSKY 184 (405)
Q Consensus 116 ~~~~~Ii~~gp-~k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~-~~~~~v~lRi~~~~~-~~--~~~~~~srf 184 (405)
++++++++-|- ..+++|.+.+.+.|+.++..+.+ + ++++.+. .....+.|-+..+.- .. ....+-...
T Consensus 174 ~~~~~~v~iGiR~~~~~e~~~~~~~gi~~~~~~ei-~~g~~~v~~~~~~~l~~~~~vylS~DiDvLDpa~aPgtgtP~pg 252 (330)
T 4g3h_A 174 IDPKCLVYFGVRSTEQSERDVIRELQIPLFSVDAI-RENMQEVVQKTKESLKAVDIIYLSLDLDIMDGKLFTSTGVRENN 252 (330)
T ss_dssp CCGGGEEEESCCBCCHHHHHHHHHHTCCEECHHHH-HHCHHHHHHHHHHHHTTCSEEEEEEEGGGBCTTTCCSSSSCCSS
T ss_pred CCcccEEEEecCCCCHHHHHHHHHcCCeEEEHHHh-hcCHHHHHHHHHHHhcCCCeEEEEEecCcCChhhCCCCCCCCCC
Confidence 45678887765 23678888888999875544332 1 2223222 222467777665531 10 011223678
Q ss_pred CCCCChhhHHHHHHHHHHc-CCeEEEEEEe
Q 037610 185 GAGHHPQEIMPLLKAAEAS-GLSVVGVSFH 213 (405)
Q Consensus 185 Gi~~~~~e~~~~~~~~~~~-~l~l~Gih~H 213 (405)
|+ +..|+.++++.+.+. ..+++|+..=
T Consensus 253 Gl--t~~e~~~il~~l~~~~~~~vvg~Div 280 (330)
T 4g3h_A 253 GL--SFDELKQLLGLLLESFKDRLKAVEVT 280 (330)
T ss_dssp CB--CHHHHHHHHHHHHHHTTTTEEEEEEE
T ss_pred CC--CHHHHHHHHHHHHhhCCCCEEEEEEE
Confidence 99 999999999987541 3467776654
No 192
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=27.73 E-value=1.7e+02 Score=26.95 Aligned_cols=37 Identities=32% Similarity=0.469 Sum_probs=29.8
Q ss_pred CeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHH
Q 037610 98 SNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAAS 138 (405)
Q Consensus 98 ~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (405)
+-++|-|.+|++.|+++|. +.|.+.+ .++++++++++
T Consensus 210 IeVEv~tl~e~~eAl~aGa--DiImLDn--~s~~~l~~av~ 246 (300)
T 3l0g_A 210 IAIECDNISQVEESLSNNV--DMILLDN--MSISEIKKAVD 246 (300)
T ss_dssp EEEEESSHHHHHHHHHTTC--SEEEEES--CCHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHcCC--CEEEECC--CCHHHHHHHHH
Confidence 4789999999999999986 4566665 47899998875
No 193
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A
Probab=27.64 E-value=74 Score=30.35 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHcC--CeEEEEEEecCCCCCCHHHHHHHHHHH
Q 037610 191 QEIMPLLKAAEASG--LSVVGVSFHVGSEATNFAAFRGAIAAA 231 (405)
Q Consensus 191 ~e~~~~~~~~~~~~--l~l~Gih~H~gs~~~~~~~~~~~i~~~ 231 (405)
+...++++.+++.+ +..+|++.|++....+.+.+.+.++++
T Consensus 212 ~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~p~~~~~~~~l~~~ 254 (379)
T 1r85_A 212 TALYNLVKQLKEEGVPIDGIGHQSHIQIGWPSEAEIEKTINMF 254 (379)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECSSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCceeEEEEeEEecCCCCCHHHHHHHHHHH
Confidence 34456666666655 688889889876545566555555443
No 194
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=27.52 E-value=1.7e+02 Score=26.62 Aligned_cols=94 Identities=10% Similarity=0.138 Sum_probs=57.1
Q ss_pred CCCCcEEEcCCC-CCHHHHHHHHHcCCcEEEecCHHHH------HHHH-hHC-CCCeEEEEEecCCCCCCC----CCCCC
Q 037610 116 VSPDRIIYANPC-KPVSHIKYAASVGVNLTTVDSVEEL------DKIR-NWH-PKSDLLIRIKSPDDSGAK----YPLDS 182 (405)
Q Consensus 116 ~~~~~Ii~~gp~-k~~~~l~~a~~~gv~~i~vds~~el------~~i~-~~~-~~~~v~lRi~~~~~~~~~----~~~~s 182 (405)
+++.++++.|.- .++++.+.+.+.|+.++..+.+.+. +.+. .+. ....+.|-+..+.-. .. ..+..
T Consensus 164 ~~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~l~~~~~~~~~vylSiDiDvlD-p~~aPgtgtp~ 242 (299)
T 2cev_A 164 IKPEHVVLIGVRSLDEGEKKFIREKGIKIYTMHEVDRLGMTRVMEETIAYLKERTDGVHLSLDLDGLD-PSDAPGVGTPV 242 (299)
T ss_dssp SCGGGEEEEEECBCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHHTTCSEEEEEEEGGGBC-TTTCCCCSSCC
T ss_pred CCccceEEEECCCCCHHHHHHHHHcCCeEEEHHHHhhcCHHHHHHHHHHHhccCCCeEEEEEccCccC-hhhcCCCCCCC
Confidence 445677776652 3578888888999876655554432 2222 222 234677777765411 11 12335
Q ss_pred CCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 183 KYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 183 rfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
..|+ +..|+.++++.+... .+++|+..=
T Consensus 243 pgGl--t~~e~~~~l~~l~~~-~~vvg~Div 270 (299)
T 2cev_A 243 IGGL--TYRESHLAMEMLAEA-QIITSAEFV 270 (299)
T ss_dssp SSCB--CHHHHHHHHHHHHHH-TCEEEEEEE
T ss_pred CCCC--CHHHHHHHHHHHhcC-CCEEEEEEE
Confidence 8899 999999999987543 357776553
No 195
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=27.45 E-value=38 Score=29.58 Aligned_cols=19 Identities=16% Similarity=0.072 Sum_probs=11.3
Q ss_pred cHHHHHHHHHcCCeEEEcC
Q 037610 86 EPALLEALAALGSNFDCGS 104 (405)
Q Consensus 86 ~~~vl~~l~~~G~g~~vaS 104 (405)
..++++.|.+.|..+.++|
T Consensus 121 ~~~ll~~Lk~~g~~i~i~~ 139 (250)
T 4gib_A 121 IESLLIDVKSNNIKIGLSS 139 (250)
T ss_dssp HHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHhccccccccc
Confidence 3466666666776555543
No 196
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=27.30 E-value=2.4e+02 Score=24.77 Aligned_cols=51 Identities=12% Similarity=0.103 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCeEEEEEEecCCC-----CCC-HHHHHHHHHHHHHHHHHHHhCCC
Q 037610 193 IMPLLKAAEASGLSVVGVSFHVGSE-----ATN-FAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 193 ~~~~~~~~~~~~l~l~Gih~H~gs~-----~~~-~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
+.+.++.++..+...+.+.+|.+.. ..+ .+.+.+.++.+.++.+.+++.|+
T Consensus 90 ~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 146 (294)
T 3vni_A 90 YTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGV 146 (294)
T ss_dssp HHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4455666666777777655665432 122 34556667777778777777665
No 197
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=27.25 E-value=3e+02 Score=23.68 Aligned_cols=19 Identities=11% Similarity=0.092 Sum_probs=13.5
Q ss_pred CcHHHHHHHHHcCC-eEEEc
Q 037610 85 PEPALLEALAALGS-NFDCG 103 (405)
Q Consensus 85 ~~~~vl~~l~~~G~-g~~va 103 (405)
+....++.+++.|+ ++++.
T Consensus 20 ~~~~~l~~~~~~G~~~vEl~ 39 (272)
T 2q02_A 20 SIEAFFRLVKRLEFNKVELR 39 (272)
T ss_dssp CHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEee
Confidence 45677777777777 77775
No 198
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=27.17 E-value=60 Score=31.46 Aligned_cols=101 Identities=11% Similarity=0.081 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcCC
Q 037610 59 GVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
+...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|.....
T Consensus 211 ~~d~e~v~avR~a~G~d~~l--~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE~ 286 (425)
T 3vcn_A 211 NSVPKLFERAREVLGWDVHL--LHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQH-TTT-PLAVGEI 286 (425)
T ss_dssp TTTHHHHHHHHHHHCSSSEE--EEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHH-CCS-CEEECTT
T ss_pred HHHHHHHHHHHHHcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhc-CCC-CEEeCCC
Confidence 345677888998885 5554 478887 3567788888887 77733 34555555553 222 3777777
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCe
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSD 163 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~ 163 (405)
..+..+++.+++.| +.++++| .+.+..++.+.+....
T Consensus 287 ~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~g 329 (425)
T 3vcn_A 287 FAHVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHH 329 (425)
T ss_dssp CCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGT
T ss_pred cCCHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcC
Confidence 78888999999876 5566776 4677777777665443
No 199
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=27.11 E-value=81 Score=28.40 Aligned_cols=58 Identities=17% Similarity=0.114 Sum_probs=34.6
Q ss_pred HHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCH----H------HHHHHHHcCCcEEEec
Q 037610 89 LLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPV----S------HIKYAASVGVNLTTVD 147 (405)
Q Consensus 89 vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~----~------~l~~a~~~gv~~i~vd 147 (405)
+++...+.|+.--|+|+.|+..+++. .+++-+++++..... . ....+++.|..++++.
T Consensus 149 ~A~~a~~~G~dGvV~s~~e~~~ir~~-~~~~f~~vtPGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvG 216 (259)
T 3tfx_A 149 LAKMAKHSGADGVICSPLEVKKLHEN-IGDDFLYVTPGIRPAGNAKDDQSRVATPKMAKEWGSSAIVVG 216 (259)
T ss_dssp HHHHHHHTTCCEEECCGGGHHHHHHH-HCSSSEEEECCCCCC-----------CHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCCEEEECHHHHHHHHhh-cCCccEEEcCCcCCCCCCcCCccccCCHHHHHHcCCCEEEEC
Confidence 34444566885456678999888875 334445556333221 1 1667778887766665
No 200
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=27.06 E-value=2.7e+02 Score=25.76 Aligned_cols=81 Identities=16% Similarity=0.073 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhcCCCCCccEEE--EeHHHHHHHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCCeEEEcCH------
Q 037610 34 LTEFMQSTILKRQEFDEVPFYL--MDLGVVVSLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGSNFDCGSR------ 105 (405)
Q Consensus 34 ~~~~~~~~~~~~~~~~t~P~~v--~d~~~l~~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~g~~vaS~------ 105 (405)
+.++|+.+... .+- |+-| ++.+.+++-++. +..+.-.+-+-..+.+++.+++.|+.+-+...
T Consensus 93 v~pvI~~l~~~---~~v-pISIDT~~~~Va~aAl~a------Ga~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~t 162 (314)
T 3tr9_A 93 LLPVIDAIKKR---FPQ-LISVDTSRPRVMREAVNT------GADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRK 162 (314)
T ss_dssp HHHHHHHHHHH---CCS-EEEEECSCHHHHHHHHHH------TCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCC
T ss_pred HHHHHHHHHhh---CCC-eEEEeCCCHHHHHHHHHc------CCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcc
Confidence 45566665432 345 6655 667777766653 45666777665567899999999986665431
Q ss_pred --------------H----HHHHHHhCCCCCCcEEEc
Q 037610 106 --------------S----EIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 106 --------------~----E~~~a~~~G~~~~~Ii~~ 124 (405)
. -++.|.++|+++++|++-
T Consensus 163 mq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilD 199 (314)
T 3tr9_A 163 PGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIID 199 (314)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred cccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEe
Confidence 1 245678899998899985
No 201
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=27.02 E-value=1.4e+02 Score=27.28 Aligned_cols=37 Identities=16% Similarity=0.212 Sum_probs=29.2
Q ss_pred CeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHH
Q 037610 98 SNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAAS 138 (405)
Q Consensus 98 ~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~ 138 (405)
+-++|-|.+|++.|+++|. +.|.+.+ .++++++++++
T Consensus 201 IeVEv~tl~ea~eAl~aGa--D~I~LDn--~~~~~l~~av~ 237 (287)
T 3tqv_A 201 VEVEVTNLDELNQAIAAKA--DIVMLDN--FSGEDIDIAVS 237 (287)
T ss_dssp EEEEESSHHHHHHHHHTTC--SEEEEES--CCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHcCC--CEEEEcC--CCHHHHHHHHH
Confidence 4789999999999999985 4566655 36888988875
No 202
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=26.92 E-value=3.9e+02 Score=24.97 Aligned_cols=80 Identities=9% Similarity=0.005 Sum_probs=50.2
Q ss_pred HHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC------------HHHHHHHHhCCCC-CCcEEEcCCCCCH
Q 037610 65 YNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS------------RSEIEAVLLLDVS-PDRIIYANPCKPV 130 (405)
Q Consensus 65 ~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS------------~~E~~~a~~~G~~-~~~Ii~~gp~k~~ 130 (405)
++++++..+ .. ..+|--..++.++.+.+.|+ ++.|++ ..-+..+.+. ++ .-.|+..|...+.
T Consensus 217 i~~l~~~~~-~p--v~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~-~~~~ipvia~GGI~~~ 292 (370)
T 1gox_A 217 VAWLQTITS-LP--ILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKA-AQGRIPVFLDGGVRRG 292 (370)
T ss_dssp HHHHHHHCC-SC--EEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHH-TTTSSCEEEESSCCSH
T ss_pred HHHHHHHhC-CC--EEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHH-hCCCCEEEEECCCCCH
Confidence 555665542 22 23676677888888889998 777754 1112222222 21 1247778888888
Q ss_pred HHHHHHHHcCCcEEEecC
Q 037610 131 SHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 131 ~~l~~a~~~gv~~i~vds 148 (405)
+++..++..|+..+.+.+
T Consensus 293 ~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 293 TDVFKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHcCCCEEeecH
Confidence 888888888887666654
No 203
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=26.82 E-value=3.2e+02 Score=25.68 Aligned_cols=99 Identities=10% Similarity=0.026 Sum_probs=63.9
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHH--cCC-eEEE--c--CHHHHHHHHhCCC-CCCcE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAA--LGS-NFDC--G--SRSEIEAVLLLDV-SPDRI 121 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~--~G~-g~~v--a--S~~E~~~a~~~G~-~~~~I 121 (405)
+.+...+.+++++++++ ++.+ .+.+|. ...+++.|.+ .++ .+|= . ..+.+..+++. . +- .|
T Consensus 172 ~~~~~~e~v~avR~a~G~~~~l--~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~-~~~i-PI 247 (389)
T 2oz8_A 172 DFDRDLRRLELLKTCVPAGSKV--MIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHA-VTWT-QI 247 (389)
T ss_dssp SHHHHHHHHHHHHTTSCTTCEE--EEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHH-CCSS-EE
T ss_pred CHHHHHHHHHHHHHhhCCCCeE--EEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhh-CCCC-CE
Confidence 45666788888888884 4544 478886 3467788888 665 4442 1 44555555543 2 21 37
Q ss_pred EEcCCCCCHHHHHHHHHcC-CcEEEe-cCHHHHHHHHhHCC
Q 037610 122 IYANPCKPVSHIKYAASVG-VNLTTV-DSVEELDKIRNWHP 160 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~g-v~~i~v-ds~~el~~i~~~~~ 160 (405)
...... +.++++.+++.| +..+++ -.+.+..++.+.+.
T Consensus 248 a~dE~~-~~~~~~~~i~~~~~d~v~ikGGit~a~~i~~~A~ 287 (389)
T 2oz8_A 248 NSGEYL-DLQGKRLLLEAHAADILNVHGQVTDVMRIGWLAA 287 (389)
T ss_dssp EECTTC-CHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHH
T ss_pred EeCCCC-CHHHHHHHHHcCCCCEEEECcCHHHHHHHHHHHH
Confidence 777777 888888888766 455666 46777777766543
No 204
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=26.79 E-value=90 Score=30.17 Aligned_cols=101 Identities=7% Similarity=0.032 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+...+.++++|++++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 205 ~~~d~e~v~avR~avG~d~~L--~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PIa~dE 280 (422)
T 3tji_A 205 MSNTVEMFHALREKYGWKLHI--LHDVHERLFPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQ-SCV-PLALGE 280 (422)
T ss_dssp HHHHHHHHHHHHHHHCSSSEE--EEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHH-CCC-CEEECT
T ss_pred HHHHHHHHHHHHHHcCCCCEE--EEECCCCCCHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhh-CCC-CEEEeC
Confidence 3456677888898885 5544 588987 3567788888887 77732 23444444443 222 377777
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
...+..+++.+++.| +..+++| -+.+..++.+.+...
T Consensus 281 ~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit~~~kia~lA~a~ 323 (422)
T 3tji_A 281 LFNNPAEWHDLIVNRRIDFIRCHVSQIGGITPALKLAHLCQAF 323 (422)
T ss_dssp TCCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred CcCCHHHHHHHHhcCCCCEEecCccccCCHHHHHHHHHHHHHc
Confidence 778888999999876 4566665 577878887765433
No 205
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=26.73 E-value=3.4e+02 Score=24.16 Aligned_cols=100 Identities=5% Similarity=0.001 Sum_probs=62.9
Q ss_pred CCccEEEE--eHHHHHHHHHHHHHhCCCCceeeeeccCC----cHHHHHHHHHcCCeEEE----cCHHHHHHHHhCCCCC
Q 037610 49 DEVPFYLM--DLGVVVSLYNHMISNLPMIHPHYAVKCNP----EPALLEALAALGSNFDC----GSRSEIEAVLLLDVSP 118 (405)
Q Consensus 49 ~t~P~~v~--d~~~l~~n~~~~~~~~~~~~i~yavKaN~----~~~vl~~l~~~G~g~~v----aS~~E~~~a~~~G~~~ 118 (405)
.. ++.+. |.+.+ +++++..|++.+.+-+.... ....++.+.....++.+ .+..-++.+.+.|+.
T Consensus 170 ~~-~vii~SF~~~~l----~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~G~~- 243 (287)
T 2oog_A 170 NG-HVMIQSFSDESL----KKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFI- 243 (287)
T ss_dssp TT-SEEEEESCHHHH----HHHHHHCTTSCEEEEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGCCHHHHHHHHHTTCE-
T ss_pred CC-CEEEEeCCHHHH----HHHHHhCCCCcEEEEecCCcccccCHHHHHHHhhhheEEcccHhhcCHHHHHHHHHCCCe-
Confidence 45 66664 54443 45677778776666554322 23444444432224433 366777888888872
Q ss_pred CcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHh
Q 037610 119 DRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRN 157 (405)
Q Consensus 119 ~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~ 157 (405)
++.-...++++++.+++.||.-|..|..+.+..+..
T Consensus 244 ---v~~wTvn~~~~~~~l~~~GVdgIiTD~P~~~~~~~~ 279 (287)
T 2oog_A 244 ---VHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK 279 (287)
T ss_dssp ---ECCBCCCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred ---EEEEeCCCHHHHHHHHHcCCCEEEeCCHHHHHHHHh
Confidence 222334578999999999998788999998876654
No 206
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=26.52 E-value=3.2e+02 Score=23.80 Aligned_cols=58 Identities=12% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHHHHHcCCeEEEcC------HHHHHHHHhCCCCCCcEEEcCCC--CCHHHHHHHHHcCCcEEEec
Q 037610 89 LLEALAALGSNFDCGS------RSEIEAVLLLDVSPDRIIYANPC--KPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 89 vl~~l~~~G~g~~vaS------~~E~~~a~~~G~~~~~Ii~~gp~--k~~~~l~~a~~~gv~~i~vd 147 (405)
.++...+.|.-+-+-+ .+-++.+.+.|+++.++++.... .+.+.++.+++.|+. +.++
T Consensus 143 ~~~~a~~~~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~-i~~~ 208 (291)
T 1bf6_A 143 AALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAY-VQFD 208 (291)
T ss_dssp HHHHHHHHCCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCE-EEEC
T ss_pred HHHHHHHHCCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCE-EEEc
Confidence 5555566787555533 23345566678877676665442 467889999999984 7777
No 207
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=26.31 E-value=1.5e+02 Score=26.94 Aligned_cols=16 Identities=13% Similarity=0.169 Sum_probs=10.6
Q ss_pred CHHHHHHHHHcCCcEE
Q 037610 129 PVSHIKYAASVGVNLT 144 (405)
Q Consensus 129 ~~~~l~~a~~~gv~~i 144 (405)
..++++.|++.|+..+
T Consensus 82 ~~~~i~~a~~ag~~~v 97 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEV 97 (298)
T ss_dssp SHHHHHHHHHTTCSEE
T ss_pred CHHhHHHHHHCCCCEE
Confidence 4667777777776543
No 208
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=26.27 E-value=4.1e+02 Score=24.96 Aligned_cols=29 Identities=14% Similarity=0.035 Sum_probs=20.3
Q ss_pred ChhhHHHHHHHHHHc-CC---eEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEAS-GL---SVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~-~l---~l~Gih~H~gs~ 217 (405)
.+.++.++++.+++. .- ...++|+|--.+
T Consensus 184 ~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~G 216 (370)
T 3rmj_A 184 IPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLG 216 (370)
T ss_dssp CHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTS
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCC
Confidence 788888888887652 21 357889986554
No 209
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=26.11 E-value=3.3e+02 Score=24.41 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=26.5
Q ss_pred cHHHHHHHHHcCC--eEEEcCHHHHHHHHhCCC
Q 037610 86 EPALLEALAALGS--NFDCGSRSEIEAVLLLDV 116 (405)
Q Consensus 86 ~~~vl~~l~~~G~--g~~vaS~~E~~~a~~~G~ 116 (405)
...+.+...+.|. =+||.+.+|++.|+++|.
T Consensus 142 l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a 174 (258)
T 4a29_A 142 LESLLEYARSYGMEPLILINDENDLDIALRIGA 174 (258)
T ss_dssp HHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCC
Confidence 4677788888886 799999999999999974
No 210
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=26.10 E-value=3.4e+02 Score=25.39 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhCC-CCceeeeeccCC-------------cHHHHHHHHHcCC-eEEEcCH----------------HHHH
Q 037610 61 VVSLYNHMISNLP-MIHPHYAVKCNP-------------EPALLEALAALGS-NFDCGSR----------------SEIE 109 (405)
Q Consensus 61 l~~n~~~~~~~~~-~~~i~yavKaN~-------------~~~vl~~l~~~G~-g~~vaS~----------------~E~~ 109 (405)
+.+-++++++..+ +..+ .+|-++ ...+++.|.+.|+ .++|... .-+.
T Consensus 211 ~~eiv~aVr~avg~d~pV--~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 288 (363)
T 3l5l_A 211 LLETLAAVREVWPENLPL--TARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAE 288 (363)
T ss_dssp HHHHHHHHHTTSCTTSCE--EEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHcCCCceE--EEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHH
Confidence 4566777777775 3323 344432 2578899999998 7887631 1122
Q ss_pred HHHhCCCCCCcEEEcCCCCCHHHHHHHHHcC-CcEEEec
Q 037610 110 AVLLLDVSPDRIIYANPCKPVSHIKYAASVG-VNLTTVD 147 (405)
Q Consensus 110 ~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~vd 147 (405)
.+++. ++. .|+.+|...+.++.+.+++.| +..+.+-
T Consensus 289 ~ir~~-~~i-PVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 289 RVRRE-AKL-PVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHH-HTC-CEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHH-cCC-cEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 23332 222 266677666777788877777 5544443
No 211
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=26.08 E-value=3.1e+02 Score=25.58 Aligned_cols=100 Identities=12% Similarity=0.086 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHH--HHcCC-eEE--Ec--CHHHHHHHHhC-CCCCCcEEE
Q 037610 58 LGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEAL--AALGS-NFD--CG--SRSEIEAVLLL-DVSPDRIIY 123 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l--~~~G~-g~~--va--S~~E~~~a~~~-G~~~~~Ii~ 123 (405)
.+.-.+.++++++.+|+..+ .+-+|. ...+++.| .+.++ .+| +. ..+++..+++. ++ .|..
T Consensus 171 ~~~d~~~v~avr~~~~~~~l--~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~i---pIa~ 245 (365)
T 3ik4_A 171 VAYDLARLRAIHQAAPTAPL--IVDGNCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSGF---AVAA 245 (365)
T ss_dssp HHHHHHHHHHHHHHSSSCCE--EEECTTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSSS---CEEE
T ss_pred HHHHHHHHHHHHHhCCCCeE--EEECCCCCCHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCCC---CEEE
Confidence 56667788888988887544 588887 23567777 55555 555 22 56666666553 33 3666
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec----CHHHHHHHHhHCCCC
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD----SVEELDKIRNWHPKS 162 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd----s~~el~~i~~~~~~~ 162 (405)
.-...+..+++.+++.| +..+++| .+.+..++.+.+...
T Consensus 246 dE~~~~~~~~~~~i~~~a~d~v~ik~~~GGit~~~~i~~~A~~~ 289 (365)
T 3ik4_A 246 DESARSAHDVLRIAREGTASVINIKLMKAGVAEGLKMIAIAQAA 289 (365)
T ss_dssp STTCSSHHHHHHHHHHTCCSEEEECHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCEEEEcCCccCHHHHHHHHHHHHHc
Confidence 66677888998888755 5667777 677777777765433
No 212
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=25.93 E-value=3.2e+02 Score=23.52 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCeEEEEEEecCCCC--CC-HHHHHHHHHHHHHHHHHHHhCCC
Q 037610 192 EIMPLLKAAEASGLSVVGVSFHVGSEA--TN-FAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 192 e~~~~~~~~~~~~l~l~Gih~H~gs~~--~~-~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
.+.+.++.++..+...+.+ |.|... .+ .+.+.+.++.+.++.+.+++.|+
T Consensus 85 ~~~~~i~~a~~lG~~~v~~--~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv 137 (278)
T 1i60_A 85 EFKGMMETCKTLGVKYVVA--VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGV 137 (278)
T ss_dssp HHHHHHHHHHHHTCCEEEE--ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHHHcCCCEEEE--ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455566666677776665 544432 23 44556666777777777777664
No 213
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=25.78 E-value=80 Score=27.64 Aligned_cols=57 Identities=9% Similarity=0.048 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCC-eEEEcC--HHHHHHHHhCCCCCCcEEEcCCCCCHH--HHHHHHHcCCcEEEe
Q 037610 87 PALLEALAALGS-NFDCGS--RSEIEAVLLLDVSPDRIIYANPCKPVS--HIKYAASVGVNLTTV 146 (405)
Q Consensus 87 ~~vl~~l~~~G~-g~~vaS--~~E~~~a~~~G~~~~~Ii~~gp~k~~~--~l~~a~~~gv~~i~v 146 (405)
..+++...+.|+ |+-|+. +.|+..+++. .+. -+++++.. .++ ....|++.|..+++|
T Consensus 125 ~~~a~~a~~~g~~GvV~sat~p~e~~~ir~~-~~~-~~~vtPGI-~~~g~tp~~a~~~Gad~iVV 186 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGTKLDHITQYRRD-FEK-MTIVSPGM-GSQGGSYGDAVCAGADYEII 186 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTTCHHHHHHHHHH-CTT-CEEEECCB-STTSBCTTHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEECCCCHHHHHHHHHh-CCC-CEEEcCCc-ccCccCHHHHHHcCCCEEEE
Confidence 678888888998 886664 6889888875 333 45555322 222 466778888876666
No 214
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=25.68 E-value=5.1e+02 Score=25.83 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=20.7
Q ss_pred ChhhHHHHHHHHHH-c--CCeEEEEEEecCCC
Q 037610 189 HPQEIMPLLKAAEA-S--GLSVVGVSFHVGSE 217 (405)
Q Consensus 189 ~~~e~~~~~~~~~~-~--~l~l~Gih~H~gs~ 217 (405)
.+.++.++++.+++ . ++ ..|+|+|--.+
T Consensus 202 ~P~~v~~lv~~l~~~~p~~i-~I~~H~Hnd~G 232 (539)
T 1rqb_A 202 KPQPAYDIIKAIKDTYGQKT-QINLHCHSTTG 232 (539)
T ss_dssp CHHHHHHHHHHHHHHHCTTC-CEEEEEBCTTS
T ss_pred CHHHHHHHHHHHHHhcCCCc-eEEEEeCCCCC
Confidence 78888888888765 2 44 46899997665
No 215
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=25.60 E-value=4e+02 Score=25.42 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS 98 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~ 98 (405)
.+...+.+++++++++ ++.+ .+.+|. ...+++.|.+.|+
T Consensus 212 ~~~d~e~v~avR~avG~d~~l--~vDan~~~~~~eai~~~~~L~~~~i 257 (428)
T 3bjs_A 212 ARVDIERVRHVRKVLGDEVDI--LTDANTAYTMADARRVLPVLAEIQA 257 (428)
T ss_dssp HHHHHHHHHHHHHHHCTTSEE--EEECTTCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCC
Confidence 3444455555555553 3333 355554 1234444555554
No 216
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=25.26 E-value=2.2e+02 Score=26.13 Aligned_cols=94 Identities=10% Similarity=0.075 Sum_probs=56.7
Q ss_pred CCCcEEEcCC-CCCHHHHHHHHHcCCcEEEecCHHH------HHHHHh-HC--CCCeEEEEEecCCCC-C--CCCCCCCC
Q 037610 117 SPDRIIYANP-CKPVSHIKYAASVGVNLTTVDSVEE------LDKIRN-WH--PKSDLLIRIKSPDDS-G--AKYPLDSK 183 (405)
Q Consensus 117 ~~~~Ii~~gp-~k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~-~~--~~~~v~lRi~~~~~~-~--~~~~~~sr 183 (405)
+++++++.|. ..++++.+.+.+.|+.++..+.+.+ ++++.+ +. ....+.|-+..+.-. . ....+...
T Consensus 170 ~~~~~~~iGiR~~~~~e~~~~~~~g~~~~~~~~i~~~g~~~~~~~~~~~l~~~~~~~vylSiDiDvLDpa~aPgtgtp~p 249 (322)
T 2aeb_A 170 SAKDIVYIGLRDVDPGEHYILKTLGIKYFSMTEVDRLGIGKVMEETLSYLLGRKKRPIHLSFDVDGLDPSFTPATGTPVV 249 (322)
T ss_dssp CGGGEEEEEECCCCHHHHHHHHHHTCEEEEHHHHHHHCHHHHHHHHHHHHHSSSCCCEEEEEEGGGBCTTTCCSBSSCCS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCCEEEEHHHHHhhCHHHHHHHHHHHHhhcCCCeEEEEEecCcCCccccCCCCCCCC
Confidence 4567777654 2368888898899987665554432 122322 21 234577777655411 0 11223368
Q ss_pred CCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 184 YGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 184 fGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
.|+ +..|+.++++.+... .+++|+..=
T Consensus 250 gGl--t~~e~~~~l~~l~~~-~~vvg~Div 276 (322)
T 2aeb_A 250 GGL--TYREGLYITEEIYKT-GLLSGLDIM 276 (322)
T ss_dssp SCB--CHHHHHHHHHHHHHH-SCEEEEEEE
T ss_pred CCC--CHHHHHHHHHHHHcc-CCEEEEEEE
Confidence 899 999999999987543 357776554
No 217
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=24.87 E-value=3.8e+02 Score=24.67 Aligned_cols=85 Identities=12% Similarity=0.040 Sum_probs=0.0
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------------cHHHHHHHHHcCC-eEEEcC---------------HHHH
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------------EPALLEALAALGS-NFDCGS---------------RSEI 108 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------------~~~vl~~l~~~G~-g~~vaS---------------~~E~ 108 (405)
+...+.+-++++++.. .+--.+|-++ ...+++.|.+.|+ .++|.. ..-+
T Consensus 193 r~r~~~eiv~avr~~v---~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~ 269 (338)
T 1z41_A 193 RYRFLREIIDEVKQVW---DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFA 269 (338)
T ss_dssp HHHHHHHHHHHHHHHC---CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHH
T ss_pred hHHHHHHHHHHHHHHc---CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHH
Q ss_pred HHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcC-CcEEEe
Q 037610 109 EAVLLLDVSPDRIIYANPCKPVSHIKYAASVG-VNLTTV 146 (405)
Q Consensus 109 ~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~g-v~~i~v 146 (405)
..+++. ++.+ |+.+|...+.++.+.+++.| +..+.+
T Consensus 270 ~~ir~~-~~iP-Vi~~Ggi~s~~~a~~~l~~G~aD~V~i 306 (338)
T 1z41_A 270 EKIREQ-ADMA-TGAVGMITDGSMAEEILQNGRADLIFI 306 (338)
T ss_dssp HHHHHH-HCCE-EEECSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHH-CCCC-EEEECCCCCHHHHHHHHHcCCceEEee
No 218
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=24.70 E-value=4.4e+02 Score=24.72 Aligned_cols=106 Identities=9% Similarity=0.180 Sum_probs=70.8
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHH--cCC-eEE--Ec--CHHHHHHHHhCCCCCCcEE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAA--LGS-NFD--CG--SRSEIEAVLLLDVSPDRII 122 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~--~G~-g~~--va--S~~E~~~a~~~G~~~~~Ii 122 (405)
+.+.-.+.++++++.+| +.. ..+.+|. ...+++.|.+ .++ .+| +. ..+.+..+++. .+- .|.
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~--L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~-~~i-PIa 243 (379)
T 3r0u_A 168 DFNRDIQLLKALDNEFSKNIK--FRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKF-SNI-PVV 243 (379)
T ss_dssp CHHHHHHHHHHHHHHCCTTSE--EEEECTTCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHH-CSS-CEE
T ss_pred CHHHHHHHHHHHHHhcCCCCe--EEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhc-CCC-CEE
Confidence 45677788899999997 444 4588887 3567788888 565 566 22 34555555543 222 377
Q ss_pred EcCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 123 YANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
......+..+++.+++.| +..+++| .+.+..++.+.+....+.+
T Consensus 244 ~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~ 293 (379)
T 3r0u_A 244 ADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISC 293 (379)
T ss_dssp ESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred eCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEE
Confidence 777778899999999876 4566775 5777777777654443333
No 219
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=24.63 E-value=4.2e+02 Score=24.50 Aligned_cols=49 Identities=12% Similarity=0.024 Sum_probs=37.4
Q ss_pred eeeeeccCCcHHHHHHHHHcCCeEEEcCH------HHH-HHHHhCCCCCCcEEEcC
Q 037610 77 PHYAVKCNPEPALLEALAALGSNFDCGSR------SEI-EAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 77 i~yavKaN~~~~vl~~l~~~G~g~~vaS~------~E~-~~a~~~G~~~~~Ii~~g 125 (405)
+..++.....+.+++.+.++|+.+-+.+. .++ +.+.++|+++++|++..
T Consensus 160 lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDP 215 (323)
T 4djd_D 160 LLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEMNLPLDHIVIDP 215 (323)
T ss_dssp EEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred eEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeC
Confidence 66788776568999999999998777654 222 36778899999999863
No 220
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=24.59 E-value=1.8e+02 Score=27.50 Aligned_cols=100 Identities=9% Similarity=0.056 Sum_probs=67.3
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+.+. .+.+++++++++ ++.+ .+++|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|...
T Consensus 191 ~~~~-~e~v~avr~a~g~d~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~~i-PI~~d 265 (388)
T 2nql_A 191 DDGP-AAEIANLRQVLGPQAKI--AADMHWNQTPERALELIAEMQPFDPWFAEAPVWTEDIAGLEKVSKN-TDV-PIAVG 265 (388)
T ss_dssp TTCH-HHHHHHHHHHHCTTSEE--EEECCSCSCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTS-CCS-CEEEC
T ss_pred ChHH-HHHHHHHHHHhCCCCEE--EEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChhhHHHHHHHHhh-CCC-CEEEe
Confidence 3445 788888888774 5544 478886 3467788888887 66632 44555555554 332 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec----CHHHHHHHHhHCCC
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD----SVEELDKIRNWHPK 161 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd----s~~el~~i~~~~~~ 161 (405)
+...+.++++.+++.| +..+.++ .+.+..++.+.+..
T Consensus 266 E~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~ 307 (388)
T 2nql_A 266 EEWRTHWDMRARIERCRIAIVQPEMGHKGITNFIRIGALAAE 307 (388)
T ss_dssp TTCCSHHHHHHHHTTSCCSEECCCHHHHCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHcCCCCEEEecCCCCCHHHHHHHHHHHHH
Confidence 8888899999999866 5556665 67777777766543
No 221
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1
Probab=24.42 E-value=2.5e+02 Score=25.98 Aligned_cols=95 Identities=9% Similarity=0.032 Sum_probs=57.2
Q ss_pred CCCCcEEEcCCC---CCHHHHHHHHHcCCcEEEecCHHH------HHHHHhHC-CCCeEEEEEecCCCCCC---CCCCCC
Q 037610 116 VSPDRIIYANPC---KPVSHIKYAASVGVNLTTVDSVEE------LDKIRNWH-PKSDLLIRIKSPDDSGA---KYPLDS 182 (405)
Q Consensus 116 ~~~~~Ii~~gp~---k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~-~~~~v~lRi~~~~~~~~---~~~~~s 182 (405)
+.+.+++..|.- .++++++.+.+.|+.++..+.+.+ ++++.+.. ....+.|-+..+.-.-+ ...+..
T Consensus 191 ~~~~~~~~iGiR~~~~~~~~~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~~l~~~~~vylSiDiDvLDpa~aPgtgtp~ 270 (336)
T 1xfk_A 191 GWDFHYACLGVSRASNTPALFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASAPGVSAPA 270 (336)
T ss_dssp TCCCEEEEEEECTTTSCHHHHHHHHHTTCEEEEGGGCSTTTHHHHHHHHHHHHHTCSEEEEEEEGGGSBTTTCCSSSSCB
T ss_pred CCCceEEEEEeCCCCCCHHHHHHHHHcCCEEEEHHHHHhcCHHHHHHHHHHHhcCCCeEEEEEeeccCChhcCCCCCCCC
Confidence 455677776653 356778888899987666555421 23333321 22456666665432101 122336
Q ss_pred CCCCCCChhhHHHHHHHH-HHcCCeEEEEEEe
Q 037610 183 KYGAGHHPQEIMPLLKAA-EASGLSVVGVSFH 213 (405)
Q Consensus 183 rfGi~~~~~e~~~~~~~~-~~~~l~l~Gih~H 213 (405)
..|+ +..|+.++++.+ .+ ..+++|+..=
T Consensus 271 pgGl--t~~e~~~~l~~l~~~-~~~vvg~Div 299 (336)
T 1xfk_A 271 ARGV--SLEALAPYFDRILHY-KNKLMIADIA 299 (336)
T ss_dssp SSCC--CHHHHHHHHHHHHHC-TTTEEEEEEE
T ss_pred CCCC--CHHHHHHHHHHHHhC-CCCEEEEEEE
Confidence 7899 999999999987 43 3467776554
No 222
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=24.16 E-value=4.7e+02 Score=24.91 Aligned_cols=27 Identities=22% Similarity=0.214 Sum_probs=14.9
Q ss_pred EEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 121 IIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 121 Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
|+-.|...+.+++..|+..|...+.+-
T Consensus 249 VIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 249 IIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp EEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred EEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 555555555666666666665544444
No 223
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=24.03 E-value=2.7e+02 Score=26.31 Aligned_cols=108 Identities=15% Similarity=0.145 Sum_probs=62.9
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCCeEE--EcCHHHHHHHHhCCCCCCcEEEcCCCC
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGSNFD--CGSRSEIEAVLLLDVSPDRIIYANPCK 128 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~g~~--vaS~~E~~~a~~~G~~~~~Ii~~gp~k 128 (405)
+.+.-.+.++++++.+++-.+-..+.+|. ...+++.|.+.++.+| +...+++..+++. .+- .|...-...
T Consensus 191 ~~~~d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~A~~~~~~L~~~~i~iEeP~~~~~~~~~l~~~-~~i-PIa~dE~~~ 268 (391)
T 4e8g_A 191 PVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRDALRLSRECPEIPFVLEQPCNTLEEIAAIRGR-VQH-GIYLDESGE 268 (391)
T ss_dssp CHHHHHHHHHHHHHHHTTTTCEEEEECTTCCCHHHHHHHHHHCTTSCEEEESCSSSHHHHHHHGGG-CCS-CEEESTTCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCCHHHHHHHHHHHhhcCeEEecCCccHHHHHHHHhh-CCC-CEEeCCCCC
Confidence 45566677788877763122334588887 2334555555554444 3455566555543 222 366666667
Q ss_pred CHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 129 PVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 129 ~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
+..+++.+++.| +..+++| .+.+..++.+.+....+.+
T Consensus 269 ~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~ 312 (391)
T 4e8g_A 269 DLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARALPH 312 (391)
T ss_dssp SHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeE
Confidence 788888888765 4556665 4667677766554333333
No 224
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=23.93 E-value=3.1e+02 Score=25.92 Aligned_cols=17 Identities=24% Similarity=0.192 Sum_probs=11.4
Q ss_pred hhHHHHHHHHHHcCCeE
Q 037610 191 QEIMPLLKAAEASGLSV 207 (405)
Q Consensus 191 ~e~~~~~~~~~~~~l~l 207 (405)
.++.++.+.++..++.+
T Consensus 308 t~~~~i~~~A~~~gi~~ 324 (390)
T 3ugv_A 308 SGWMRAAGVAGAWGIPM 324 (390)
T ss_dssp HHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHcCCEE
Confidence 45667777777777664
No 225
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=23.82 E-value=2.1e+02 Score=26.92 Aligned_cols=23 Identities=17% Similarity=0.124 Sum_probs=15.5
Q ss_pred CCCCCCCChhhHHHHHHHHHHcCCeE
Q 037610 182 SKYGAGHHPQEIMPLLKAAEASGLSV 207 (405)
Q Consensus 182 srfGi~~~~~e~~~~~~~~~~~~l~l 207 (405)
+|.|= ..++.++.+.++..++.+
T Consensus 268 ~~~GG---it~~~~i~~~A~~~g~~~ 290 (382)
T 2gdq_A 268 MHVNG---IDEFRDCLQLARYFGVRA 290 (382)
T ss_dssp TTTTH---HHHHHHHHHHHHHHTCEE
T ss_pred cccCC---HHHHHHHHHHHHHcCCEE
Confidence 55542 356778888888878763
No 226
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=23.79 E-value=2.8e+02 Score=25.86 Aligned_cols=103 Identities=16% Similarity=0.119 Sum_probs=70.1
Q ss_pred eHHHHHHHHHHHHHhCCC-CceeeeeccCC------cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHHhC-CCCCCcEEE
Q 037610 57 DLGVVVSLYNHMISNLPM-IHPHYAVKCNP------EPALLEALAALGS-NFD--CG--SRSEIEAVLLL-DVSPDRIIY 123 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~-~~i~yavKaN~------~~~vl~~l~~~G~-g~~--va--S~~E~~~a~~~-G~~~~~Ii~ 123 (405)
+.+.-.+.++++++.+|. ..+ .+.+|. ...+++.|.+.|+ .+| +. ..+.+..+++. ++ .|..
T Consensus 170 ~~~~d~~~v~avR~~~g~~~~l--~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~i---Pia~ 244 (370)
T 1chr_A 170 SPQDDLIHMEALSNSLGSKAYL--RVDVNQAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRV---AIMA 244 (370)
T ss_dssp CSHHHHHHHHHHHHHSSTTCCE--EEECTTCCCTTHHHHHTHHHHTTTEEEEECCSCTTCHHHHHHHHHHSCS---EEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCC---CEEe
Confidence 445667788899999873 554 578887 3467888888887 666 22 23445555443 33 4777
Q ss_pred cCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeE
Q 037610 124 ANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDL 164 (405)
Q Consensus 124 ~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v 164 (405)
.....+..+++.+++.| +..+++| .+.+..++.+.+....+
T Consensus 245 dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~ 291 (370)
T 1chr_A 245 DESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGI 291 (370)
T ss_dssp SSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTC
T ss_pred CCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCC
Confidence 77788899999998865 5667776 57888888776543333
No 227
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=23.71 E-value=4.1e+02 Score=24.05 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=59.5
Q ss_pred HHHHHh-CCCCCCcEEEcCCCC---CHHHHHHHHHcCCcEEEecCHHH-HHHHHhHC-CCCeEEEEEecCCCCCC---CC
Q 037610 108 IEAVLL-LDVSPDRIIYANPCK---PVSHIKYAASVGVNLTTVDSVEE-LDKIRNWH-PKSDLLIRIKSPDDSGA---KY 178 (405)
Q Consensus 108 ~~~a~~-~G~~~~~Ii~~gp~k---~~~~l~~a~~~gv~~i~vds~~e-l~~i~~~~-~~~~v~lRi~~~~~~~~---~~ 178 (405)
+..+.+ .+.-. +++..|.-. ++++.+.+.+.|+..+..+.+.+ ++.+.+.. ....+.|-+..+.-.-+ ..
T Consensus 163 ~~~~~~~~~~~~-~~~~iGiR~~~~~~~e~~~~~~~g~~~~~~~~i~~~~~~v~~~~~~~~~vylSiDiDvlDpa~aPgt 241 (305)
T 1woh_A 163 FRRACEALPNLV-HITTVGLRGLRFDPEAVAAARARGHTIIPMDDVTADLAGVLAQLPRGQNVYFSVDVDGFDPAVIPGT 241 (305)
T ss_dssp HHHHHHHCTTEE-EEEEEEECCSCCCHHHHHHHHHTTCEEEEHHHHHHCHHHHHTTSCCSSEEEEEEEGGGBCTTTCCCB
T ss_pred HHHHhhccCCCC-cEEEEEeCCCCCCHHHHHHHHHcCCeEEEHHHHHHHHHHHHHHhhCCCcEEEEEeecCCChhhCCCC
Confidence 445554 43212 677666532 68999999999987555444333 22232222 22356666665431101 12
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 179 PLDSKYGAGHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 179 ~~~srfGi~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
.+....|+ +..|+.++++.+.+. .+++|+..=
T Consensus 242 gtp~pgGl--t~~e~~~~l~~l~~~-~~vvg~Div 273 (305)
T 1woh_A 242 SSPEPDGL--TYAQGMKILAAAAAN-NTVVGLDLV 273 (305)
T ss_dssp SSCCSSCB--CHHHHHHHHHHHHHH-SEEEEEEEE
T ss_pred CCCCCCCC--CHHHHHHHHHHHhcc-CCEEEEEEE
Confidence 23468899 999999999987542 467776554
No 228
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=23.66 E-value=1.3e+02 Score=26.59 Aligned_cols=52 Identities=13% Similarity=0.045 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHcCCeEEEEEEe--c---CCC--CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 037610 192 EIMPLLKAAEASGLSVVGVSFH--V---GSE--ATNFAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 192 e~~~~~~~~~~~~l~l~Gih~H--~---gs~--~~~~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
++.++.+.+++.++.+.++|.. . ... ..+.+...+.++.+.+.++.+..+|.
T Consensus 69 ~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~ 127 (290)
T 2zvr_A 69 DWNEVKILSEELNLPICAIGTGQAYLADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGA 127 (290)
T ss_dssp CHHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHcCCeEEEEeccCccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3445555566779999998882 1 111 23454455667777777777766553
No 229
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=23.49 E-value=2.1e+02 Score=27.14 Aligned_cols=104 Identities=6% Similarity=0.034 Sum_probs=68.6
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC---eEEE----cCHHHHHHHHhC-CCCCCcE
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS---NFDC----GSRSEIEAVLLL-DVSPDRI 121 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~---g~~v----aS~~E~~~a~~~-G~~~~~I 121 (405)
+.+.-.+.++++++.++ ++.++. +.+|. ...+++.|.+.|+ .+|= ...+.+..+++. ++ + |
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~l~~-vDan~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~~i--P-I 243 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGSRVRIKS-YDFSHLLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDY--P-I 243 (391)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEE-EECTTCSCHHHHHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSS--C-E
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEE-ecCCCCcCHHHHHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHcCC--C-c
Confidence 56777788888998884 555543 88887 3456777777776 4542 245666665553 33 2 4
Q ss_pred EEcCCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 122 IYANPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 122 i~~gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
.....+.++++.+++.| +..++++ .+.+..++.+.+....+.+
T Consensus 244 --dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 292 (391)
T 3gd6_A 244 --SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDV 292 (391)
T ss_dssp --EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred --CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEE
Confidence 66677888999988765 5667887 6777777777654444333
No 230
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=23.28 E-value=3.1e+02 Score=26.39 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=55.5
Q ss_pred CCCcEEEcCC-CCCHHHHHHHHHcCCcEEEecCHHHH------HHHH-hHC--CCCeEEEEEecCCC-CC--CCCCCCCC
Q 037610 117 SPDRIIYANP-CKPVSHIKYAASVGVNLTTVDSVEEL------DKIR-NWH--PKSDLLIRIKSPDD-SG--AKYPLDSK 183 (405)
Q Consensus 117 ~~~~Ii~~gp-~k~~~~l~~a~~~gv~~i~vds~~el------~~i~-~~~--~~~~v~lRi~~~~~-~~--~~~~~~sr 183 (405)
+++++++.|- ..+++|.+++.+.|+.++..+.+.+. +.+. .+. ....+.|-+..+.- .. ....+...
T Consensus 263 ~p~~vv~IGIRs~d~eE~e~~~~~Gi~v~t~~eI~~~Gi~~vie~il~~l~~~~~~~VYLSfDIDvLDPa~APGtGTPep 342 (413)
T 3sl1_A 263 KPENTAIIGIRDIDAYEKIILKKCNINYYTIFDIEKNGIYNTICTALEKIDPNSNCPIHISLDIDSVDNVFAPGTGTVAK 342 (413)
T ss_dssp CGGGEEEEEECCCCHHHHHHHHHTTCEEEEHHHHHHHHHHHHHHHHHHHHCTTSCSCEEEEEEGGGBCTTTCCCSSSCCS
T ss_pred CcceEEEEEcCCCCHHHHHHHHHcCCEEEeHHHhhhcCHHHHHHHHHHHhhhcCCceEEEEEeccEEChhhCCCCCCCCC
Confidence 4567777654 23578888888999976655544332 2222 232 23457777765531 10 01122357
Q ss_pred CCCCCChhhHHHHHHHHHHcCCeEEEEEE
Q 037610 184 YGAGHHPQEIMPLLKAAEASGLSVVGVSF 212 (405)
Q Consensus 184 fGi~~~~~e~~~~~~~~~~~~l~l~Gih~ 212 (405)
.|+ +..|+..+++.+... .+++|+..
T Consensus 343 GGL--t~rEll~llr~L~~s-~kVvG~DI 368 (413)
T 3sl1_A 343 GGL--NYREINLLMKILAET-KRVVSMDL 368 (413)
T ss_dssp SCB--CHHHHHHHHHHHHHH-SCEEEEEE
T ss_pred CCC--CHHHHHHHHHHHhcc-CCEEEEEE
Confidence 899 999999999987543 25666655
No 231
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=23.27 E-value=3.3e+02 Score=25.40 Aligned_cols=102 Identities=8% Similarity=0.027 Sum_probs=68.6
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEcC----HHHHHHHHhCCCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCGS----RSEIEAVLLLDVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~vaS----~~E~~~a~~~G~~~~~Ii~~ 124 (405)
+.+.-.+.++++|+.++ +..+ .+.+|. ...+++.|.+.|+ .+|--- .+.+..+++. .+- .|...
T Consensus 166 ~~~~d~~~v~avR~~~g~~~~l--~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~~i-PIa~d 241 (368)
T 3q45_A 166 SKELDVERIRMIREAAGDSITL--RIDANQGWSVETAIETLTLLEPYNIQHCEEPVSRNLYTALPKIRQA-CRI-PIMAD 241 (368)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEE--EEECTTCBCHHHHHHHHHHHGGGCCSCEECCBCGGGGGGHHHHHHT-CSS-CEEES
T ss_pred CHHHHHHHHHHHHHHhCCCCeE--EEECCCCCChHHHHHHHHHHhhcCCCEEECCCChhHHHHHHHHHhh-CCC-CEEEc
Confidence 45666778888998884 5544 578987 3467888888886 676322 3344555443 222 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
....+..+++.+++.| +..+++| .+.+..++.+.+...
T Consensus 242 E~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~ 285 (368)
T 3q45_A 242 ESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQA 285 (368)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHc
Confidence 7778899999998865 5567777 577878877765433
No 232
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.02 E-value=1.2e+02 Score=27.38 Aligned_cols=52 Identities=12% Similarity=-0.019 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHcCCeEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 037610 192 EIMPLLKAAEASGLSVVGVSFHVGSEATNFAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 192 e~~~~~~~~~~~~l~l~Gih~H~gs~~~~~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
++.++.+.+++.++.+.++|+-..-...+.....+.++.+.+.++.+..+|.
T Consensus 77 ~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 128 (305)
T 3obe_A 77 ASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGV 128 (305)
T ss_dssp CHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCC
Confidence 6677777778889999887543321212333333445556666666666553
No 233
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=22.99 E-value=1.8e+02 Score=25.73 Aligned_cols=54 Identities=11% Similarity=0.142 Sum_probs=36.1
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEEEec--CC--CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 037610 189 HPQEIMPLLKAAEASGLSVVGVSFHV--GS--EATNFAAFRGAIAAAKAVFDTAARTS 242 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~~l~l~Gih~H~--gs--~~~~~~~~~~~i~~~~~~~~~~~~~G 242 (405)
+.+++.++.+.+++.++.+.++++.. +- ...+.+...+.++.+.+.++.+..+|
T Consensus 64 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG 121 (295)
T 3cqj_A 64 SREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVG 121 (295)
T ss_dssp CHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 66777777777888899999887531 11 12355555666777777777776655
No 234
>1vsq_C Mannose-specific phosphotransferase enzyme IIB component; sugar transport, complex (transferase/phosphocarrier, cytoplasm, membrane; HET: NEP; NMR {Escherichia coli} PDB: 2jzn_C 2jzo_D 2jzh_A
Probab=22.91 E-value=1.1e+02 Score=25.47 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=38.9
Q ss_pred HHHHHHHHcCCeEEEcCHHHHHHHHhCC-CCCCcEEEcCCCCCHHHHHHHHHcCCc
Q 037610 88 ALLEALAALGSNFDCGSRSEIEAVLLLD-VSPDRIIYANPCKPVSHIKYAASVGVN 142 (405)
Q Consensus 88 ~vl~~l~~~G~g~~vaS~~E~~~a~~~G-~~~~~Ii~~gp~k~~~~l~~a~~~gv~ 142 (405)
.+++.....|+.+.+-|.+++......+ .+..++++. +++++++..+++.|+.
T Consensus 48 ~~lk~a~P~gvk~~i~sve~ai~~~~~~~~~~~~v~ll--~k~p~d~~~lve~Gv~ 101 (165)
T 1vsq_C 48 TLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLL--FTNPTDVERLVEGGVK 101 (165)
T ss_dssp HHHHHTCCTTCEEEEECHHHHHHHHTCGGGTTCEEEEE--ESSHHHHHHHHHTTCC
T ss_pred HHHHhcCCCCCeEEEEEHHHHHHHHhccccCCcEEEEE--ECCHHHHHHHHHcCCC
Confidence 4555555568899999999999888875 455666654 4678888888888874
No 235
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=22.81 E-value=4.6e+02 Score=24.78 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=69.1
Q ss_pred eHHHHHHHHHHHHHhCC-CCceeeeeccCC-----cHHHHHHHHHcCC-eEE--Ec--CHHHHHHHHhC-CCCCCcEEEc
Q 037610 57 DLGVVVSLYNHMISNLP-MIHPHYAVKCNP-----EPALLEALAALGS-NFD--CG--SRSEIEAVLLL-DVSPDRIIYA 124 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~-~~~i~yavKaN~-----~~~vl~~l~~~G~-g~~--va--S~~E~~~a~~~-G~~~~~Ii~~ 124 (405)
+.+.-.+.++++++.++ ++.+ .+.+|. ...+++.|.+.|+ .+| +. ..+.+..+++. ++ .|...
T Consensus 187 ~~~~d~~~v~avR~a~G~~~~L--~vDaN~~w~~~~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~i---PIa~d 261 (400)
T 3mwc_A 187 KPGWDVEPLQETRRAVGDHFPL--WTDANSSFELDQWETFKAMDAAKCLFHEQPLHYEALLDLKELGERIET---PICLD 261 (400)
T ss_dssp BTTBSHHHHHHHHHHHCTTSCE--EEECTTCCCGGGHHHHHHHGGGCCSCEESCSCTTCHHHHHHHHHHSSS---CEEES
T ss_pred CcchHHHHHHHHHHhcCCCCEE--EEeCCCCCCHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCC---CEEEe
Confidence 34444567888888884 5554 467876 2467777877886 666 22 35555555543 33 37777
Q ss_pred CCCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEE
Q 037610 125 NPCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLI 166 (405)
Q Consensus 125 gp~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~l 166 (405)
....+..+++.+++.| +..+++| .+.+..++.+.+....+.+
T Consensus 262 E~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 309 (400)
T 3mwc_A 262 ESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKL 309 (400)
T ss_dssp TTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred CCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEE
Confidence 7788899999999876 5567776 6777777777654444433
No 236
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=22.58 E-value=4.5e+02 Score=24.74 Aligned_cols=96 Identities=9% Similarity=0.057 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcCCC
Q 037610 60 VVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYANPC 127 (405)
Q Consensus 60 ~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~gp~ 127 (405)
...+.++++|++++ ++. ..+.+|. ...+++.|.+.|+ .+|=- ..+.+..+++. .+- .|......
T Consensus 184 ~~~~~v~avReavG~d~~--l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~-~~i-PIa~dE~~ 259 (388)
T 3tcs_A 184 RTEEIIPTMRRELGDDVD--LLIDANSCYTPDRAIEVGHMLQDHGFCHFEEPCPYWELAQTKQVTDA-LDI-DVTGGEQD 259 (388)
T ss_dssp HHHHHHHHHHHHHCSSSE--EEEECTTCCCHHHHHHHHHHHHHTTCCEEECCSCTTCHHHHHHHHHH-CSS-CEEECTTC
T ss_pred HHHHHHHHHHHHhCCCCe--EEEeCCCCcCHHHHHHHHHHHhhcCCeEEECCCCccCHHHHHHHHHh-cCC-CEEcCCcc
Confidence 45677888998885 544 4589997 3567788888887 66632 44555555543 222 26665566
Q ss_pred CCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHC
Q 037610 128 KPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWH 159 (405)
Q Consensus 128 k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~ 159 (405)
.+..+++.+++.| +..+++| -+.+..++.+.+
T Consensus 260 ~~~~~~~~~i~~~a~d~v~~d~~~~GGit~a~kia~~A 297 (388)
T 3tcs_A 260 CDLPTWQRMIDMRAVDIVQPDILYLGGICRTLRVVEMA 297 (388)
T ss_dssp CCHHHHHHHHHHTCCSEECCCHHHHTSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHH
Confidence 6777888777654 4455555 455555655543
No 237
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A*
Probab=22.49 E-value=81 Score=30.07 Aligned_cols=40 Identities=18% Similarity=0.386 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHcC--CeEEEEEEecCCCCCCHHHHHHHHHH
Q 037610 191 QEIMPLLKAAEASG--LSVVGVSFHVGSEATNFAAFRGAIAA 230 (405)
Q Consensus 191 ~e~~~~~~~~~~~~--l~l~Gih~H~gs~~~~~~~~~~~i~~ 230 (405)
+...++++.++..+ +..+|++.|++....+.+.+.+.+++
T Consensus 209 ~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~~p~~~~i~~~l~~ 250 (378)
T 1ur1_A 209 EATVEMIERLQKRGMPIHGLGIQGHLGIDTPPIAEIEKSIIA 250 (378)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCcceEEecCcCCCCCCCHHHHHHHHHH
Confidence 34456666666654 78889988986654555555444444
No 238
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=22.42 E-value=4.3e+02 Score=24.85 Aligned_cols=107 Identities=9% Similarity=0.131 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCCc------HHHHHHH-HHcCCeEE--EcCHHHHHHHHhCCCCCCcEEEcCCC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNPE------PALLEAL-AALGSNFD--CGSRSEIEAVLLLDVSPDRIIYANPC 127 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~~------~~vl~~l-~~~G~g~~--vaS~~E~~~a~~~G~~~~~Ii~~gp~ 127 (405)
.+.-.+.++++++.++ ++. ..+.+|.. ..+++.| .+.++.+| +...+++..+++. .+- .|......
T Consensus 177 ~~~d~~~v~avR~a~G~~~~--L~vDaN~~~~~~~A~~~~~~l~~~~~i~iEeP~~~~~~~~~l~~~-~~i-PIa~dE~~ 252 (386)
T 3fv9_G 177 PALDAERITACLADRQPGEW--YLADANNGLTVEHALRMLSLLPPGLDIVLEAPCASWAETKSLRAR-CAL-PLLLDELI 252 (386)
T ss_dssp HHHHHHHHHHHTTTCCTTCE--EEEECTTCCCHHHHHHHHHHSCSSCCCEEECCCSSHHHHHHHHTT-CCS-CEEESTTC
T ss_pred HHHHHHHHHHHHHHcCCCCe--EEEECCCCCCHHHHHHHHHHhhccCCcEEecCCCCHHHHHHHHhh-CCC-CEEeCCCc
Confidence 4455566777777774 443 45888872 2344444 33344344 3456666655544 222 37777777
Q ss_pred CCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCeEEEEE
Q 037610 128 KPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSDLLIRI 168 (405)
Q Consensus 128 k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~v~lRi 168 (405)
.+..+++.+++.| +..+++| .+.+..++.+.+....+.+-+
T Consensus 253 ~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~ 299 (386)
T 3fv9_G 253 QTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSV 299 (386)
T ss_dssp CSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEe
Confidence 7888888888765 5566665 567777777665444444433
No 239
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=22.38 E-value=3.4e+02 Score=24.46 Aligned_cols=87 Identities=10% Similarity=0.111 Sum_probs=49.3
Q ss_pred eHHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcC-C-eEEEcC------------------------
Q 037610 57 DLGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALG-S-NFDCGS------------------------ 104 (405)
Q Consensus 57 d~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G-~-g~~vaS------------------------ 104 (405)
|.+.+.+-++++++... .- -.+|..+ ...+++.+.+.| + ++.+..
T Consensus 144 ~~~~~~~ii~~vr~~~~-~P--v~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~g 220 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYG-LP--FGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFG 220 (314)
T ss_dssp SHHHHHHHHHHHHHHHC-SC--EEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEE
T ss_pred CHHHHHHHHHHHHHhcC-CC--EEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCC
Confidence 55667777777776542 22 2355444 234477777888 6 554332
Q ss_pred -----------HHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEec
Q 037610 105 -----------RSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVD 147 (405)
Q Consensus 105 -----------~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vd 147 (405)
..-+..+++. ++.=.|+.+|...+.++..++++.|+..+.+-
T Consensus 221 G~sg~~~~p~~~~~i~~v~~~-~~~ipvi~~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 221 GLGGKYILPTALANVNAFYRR-CPDKLVFGCGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp EEESGGGHHHHHHHHHHHHHH-CTTSEEEEESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred ccCcccccHHHHHHHHHHHHh-cCCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 2233333333 21123777777778888888887776644444
No 240
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=22.15 E-value=82 Score=25.80 Aligned_cols=43 Identities=14% Similarity=0.227 Sum_probs=29.6
Q ss_pred HHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHH
Q 037610 111 VLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKI 155 (405)
Q Consensus 111 a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i 155 (405)
+.+.|++++++++-|-. ..++..|.+.|+..+.+..-.++...
T Consensus 158 ~~~~~~~~~~~~~vgD~--~~Di~~a~~aG~~~~~~~~~~~~~~~ 200 (206)
T 2b0c_A 158 LQAEGFSPSDTVFFDDN--ADNIEGANQLGITSILVKDKTTIPDY 200 (206)
T ss_dssp HHHHTCCGGGEEEEESC--HHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred HHHcCCCHHHeEEeCCC--HHHHHHHHHcCCeEEEecCCchHHHH
Confidence 44557887778777763 56788888888766667766665543
No 241
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=22.07 E-value=5.2e+02 Score=24.59 Aligned_cols=84 Identities=24% Similarity=0.320 Sum_probs=47.9
Q ss_pred eEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCcEEEecCHHHHHHHHhHCCCCeEEEEEecCCCCCCCC
Q 037610 99 NFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVNLTTVDSVEELDKIRNWHPKSDLLIRIKSPDDSGAKY 178 (405)
Q Consensus 99 g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~~el~~i~~~~~~~~v~lRi~~~~~~~~~~ 178 (405)
|+|+++..|++ +.|.. .++...+..+.++.+.++|++. |.||+..+.. .
T Consensus 27 G~Dis~~~~~e---~~G~~----y~~~~G~~~d~~~ilk~~G~N~--------------------VRlrvwv~p~----~ 75 (399)
T 1ur4_A 27 GVDVSSIIALE---ESGVA----FYNESGKKQDIFKTLKEAGVNY--------------------VRVRIWNDPY----D 75 (399)
T ss_dssp EEECTTHHHHH---HTTCC----CBCTTSCBCCHHHHHHHTTCCE--------------------EEEEECSCCB----C
T ss_pred EEehhhhHHHH---HcCCe----eeCCCCccchHHHHHHHCCCCE--------------------EEEeeecCCc----c
Confidence 88999988765 45542 2342222334566666677653 2345542111 0
Q ss_pred CCCCCC--CCCCChhhHHHHHHHHHHcCCeEEEEEEecC
Q 037610 179 PLDSKY--GAGHHPQEIMPLLKAAEASGLSVVGVSFHVG 215 (405)
Q Consensus 179 ~~~srf--Gi~~~~~e~~~~~~~~~~~~l~l~Gih~H~g 215 (405)
..+.-+ |.. +.+.+.++++++++.++++. |-||.+
T Consensus 76 ~~g~~y~~g~~-d~~~~~~~a~~Ak~~GLkVl-ldfHys 112 (399)
T 1ur4_A 76 ANGNGYGGGNN-DLEKAIQIGKRATANGMKLL-ADFHYS 112 (399)
T ss_dssp TTCCBCSTTCC-CHHHHHHHHHHHHHTTCEEE-EEECSS
T ss_pred cccCccCCCCC-CHHHHHHHHHHHHHCCCEEE-EEeccC
Confidence 012223 321 67778888888888999866 678863
No 242
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=21.99 E-value=42 Score=24.14 Aligned_cols=14 Identities=21% Similarity=0.838 Sum_probs=11.3
Q ss_pred CCCCCCCCEEEEcC
Q 037610 358 LPELEVNDWLVFSE 371 (405)
Q Consensus 358 lp~l~~GD~l~~~~ 371 (405)
+|++++||||.++-
T Consensus 33 v~~~~vGD~VLVH~ 46 (75)
T 2z1c_A 33 MPDTKPGDWVIVHT 46 (75)
T ss_dssp STTCCTTCEEEEET
T ss_pred eCCCCCCCEEEEec
Confidence 47889999998764
No 243
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.94 E-value=91 Score=27.81 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=15.3
Q ss_pred HHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC
Q 037610 66 NHMISNLPMIHPHYAVKCNPEPALLEALAALGS 98 (405)
Q Consensus 66 ~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~ 98 (405)
+++|+..|+..+-.-++.+.-...++.+.+.|+
T Consensus 78 ~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGA 110 (246)
T 3inp_A 78 KALRDYGITAGMDVHLMVKPVDALIESFAKAGA 110 (246)
T ss_dssp HHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTC
T ss_pred HHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCC
Confidence 344444433333333444433344555666665
No 244
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=21.88 E-value=2.9e+02 Score=25.96 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHhCC-CCceeeeeccCC------cHHHHHHHHHcCC-eEEEc----CHHHHHHHHhCCCCCCcEEEcC
Q 037610 58 LGVVVSLYNHMISNLP-MIHPHYAVKCNP------EPALLEALAALGS-NFDCG----SRSEIEAVLLLDVSPDRIIYAN 125 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~-~~~i~yavKaN~------~~~vl~~l~~~G~-g~~va----S~~E~~~a~~~G~~~~~Ii~~g 125 (405)
.+...+.++++++.++ ++.+ .+.+|. ...+++.|.+.|+ .+|-- ..+.+..+++. .+- .|....
T Consensus 182 ~~~~~e~v~avr~a~G~d~~l--~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~-~~i-pIa~dE 257 (392)
T 2poz_A 182 IELAYRRVKAVRDAAGPEIEL--MVDLSGGLTTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQ-IPL-PIAVGE 257 (392)
T ss_dssp HHHHHHHHHHHHHHHCTTSEE--EEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHH-CSS-CEEECT
T ss_pred HHHHHHHHHHHHHhcCCCCEE--EEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhh-CCC-CEEecC
Confidence 3445577778888774 5544 488886 2467777777776 56532 34445544443 222 366666
Q ss_pred CCCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCCe
Q 037610 126 PCKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKSD 163 (405)
Q Consensus 126 p~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~~ 163 (405)
...+.++++.+++.| +..+.++ .+.+..++.+.+....
T Consensus 258 ~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 301 (392)
T 2poz_A 258 RVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYN 301 (392)
T ss_dssp TCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcC
Confidence 677778888888765 4444443 5677777776654433
No 245
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=21.72 E-value=2.7e+02 Score=26.33 Aligned_cols=78 Identities=13% Similarity=0.042 Sum_probs=45.2
Q ss_pred HHHHHHHHhCCCCceeeeeccCCcHHHHHHHHHcCC-eEEEcC---------------HHHHHHHHhCCCCCCcEEEcCC
Q 037610 63 SLYNHMISNLPMIHPHYAVKCNPEPALLEALAALGS-NFDCGS---------------RSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 63 ~n~~~~~~~~~~~~i~yavKaN~~~~vl~~l~~~G~-g~~vaS---------------~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
+.++++++..+ +-..+|--..++.++.+.+.|+ ++.|+. +.|+..+. +. .|+.+|.
T Consensus 215 ~~i~~i~~~~~---~Pv~vkgv~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~--~~---pVia~GG 286 (380)
T 1p4c_A 215 EALRWLRDLWP---HKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT--GK---PVLIDSG 286 (380)
T ss_dssp HHHHHHHHHCC---SEEEEEEECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH--CS---CEEECSS
T ss_pred HHHHHHHHhcC---CCEEEEecCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc--CC---eEEEECC
Confidence 45556666543 1223454356777777888887 676643 12322222 22 4777777
Q ss_pred CCCHHHHHHHHHcCCcEEEecC
Q 037610 127 CKPVSHIKYAASVGVNLTTVDS 148 (405)
Q Consensus 127 ~k~~~~l~~a~~~gv~~i~vds 148 (405)
..+.+++..++..|+..+.+.+
T Consensus 287 I~~~~dv~kal~~GAdaV~iGr 308 (380)
T 1p4c_A 287 FRRGSDIVKALALGAEAVLLGR 308 (380)
T ss_dssp CCSHHHHHHHHHTTCSCEEESH
T ss_pred CCCHHHHHHHHHhCCcHhhehH
Confidence 7777777777777766445544
No 246
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=21.71 E-value=3.6e+02 Score=24.13 Aligned_cols=44 Identities=9% Similarity=0.020 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhCCCCceeeeeccCC-----cHHHHHHHHHcCC-eEEE
Q 037610 59 GVVVSLYNHMISNLPMIHPHYAVKCNP-----EPALLEALAALGS-NFDC 102 (405)
Q Consensus 59 ~~l~~n~~~~~~~~~~~~i~yavKaN~-----~~~vl~~l~~~G~-g~~v 102 (405)
+.+-+.++++|+...++-+..-.-.|+ ....++.+.+.|+ |+-+
T Consensus 80 ~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 80 SDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEe
Confidence 344556666665533333333233343 2345555666665 5444
No 247
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=21.67 E-value=4.4e+02 Score=23.61 Aligned_cols=45 Identities=9% Similarity=0.015 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhCCCCceeeeeccCC-----cHHHHHHHHHcCC-eEEE
Q 037610 58 LGVVVSLYNHMISNLPMIHPHYAVKCNP-----EPALLEALAALGS-NFDC 102 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~~~~i~yavKaN~-----~~~vl~~l~~~G~-g~~v 102 (405)
.+.+-+.++++|+..+++-+..-.-.|+ ....++.+.+.|+ |+-+
T Consensus 81 ~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 81 PDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 3444556777776544433322222232 3445566666665 5444
No 248
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=21.37 E-value=96 Score=26.17 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=61.1
Q ss_pred EeHHHHHHHHHHHHHh-CCCCceeeeeccCCcHHHHHHHHHc---CC--eE-EEcCHHHHHHHHhCCCCCCcEEEcCCCC
Q 037610 56 MDLGVVVSLYNHMISN-LPMIHPHYAVKCNPEPALLEALAAL---GS--NF-DCGSRSEIEAVLLLDVSPDRIIYANPCK 128 (405)
Q Consensus 56 ~d~~~l~~n~~~~~~~-~~~~~i~yavKaN~~~~vl~~l~~~---G~--g~-~vaS~~E~~~a~~~G~~~~~Ii~~gp~k 128 (405)
.|.+...+-++.+.+. ++-+. ..+.+......++.+.+. +. |+ .|.+.+|++.+.++|.+ .+ .+|..
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~ie--v~~~~~~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad---~i-v~~~~ 92 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIE--ITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAE---FI-VSPHL 92 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEE--EETTSTTHHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCS---EE-ECSSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEE--EeCCChhHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCC---EE-EcCCC
Confidence 4566666667666653 22222 233443334456656553 34 44 34689999999999873 44 46667
Q ss_pred CHHHHHHHHHcCCcEE-EecCHHHHHHHHhHC
Q 037610 129 PVSHIKYAASVGVNLT-TVDSVEELDKIRNWH 159 (405)
Q Consensus 129 ~~~~l~~a~~~gv~~i-~vds~~el~~i~~~~ 159 (405)
+.+-++.+.+.|+.++ .+.+.+|+.+..+.+
T Consensus 93 ~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~G 124 (205)
T 1wa3_A 93 DEEISQFCKEKGVFYMPGVMTPTELVKAMKLG 124 (205)
T ss_dssp CHHHHHHHHHHTCEEECEECSHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCcEECCcCCHHHHHHHHHcC
Confidence 7888888888898532 344788877766554
No 249
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A
Probab=21.37 E-value=1.1e+02 Score=28.71 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHcC--CeEEEEEEecCCCCCCHHHHHHHHH
Q 037610 191 QEIMPLLKAAEASG--LSVVGVSFHVGSEATNFAAFRGAIA 229 (405)
Q Consensus 191 ~e~~~~~~~~~~~~--l~l~Gih~H~gs~~~~~~~~~~~i~ 229 (405)
+...++++.++..+ +.-+|++.|++....+.+.+.+.++
T Consensus 192 ~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p~~~~~~~~l~ 232 (348)
T 1w32_A 192 TALVNLVQRLLNNGVPIDGVGFQMHVMNDYPSIANIRQAMQ 232 (348)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEESSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcccEEEeccccCCCCCCHHHHHHHHH
Confidence 33556666666655 6888898898765445554444443
No 250
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=21.29 E-value=1.5e+02 Score=28.53 Aligned_cols=102 Identities=3% Similarity=-0.015 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHhCCCCceeeeeccCC------cHHHHHHHHHcCC-eEEE----cCHHHHHHHHhCCCCCCcEEEcCC
Q 037610 58 LGVVVSLYNHMISNLPMIHPHYAVKCNP------EPALLEALAALGS-NFDC----GSRSEIEAVLLLDVSPDRIIYANP 126 (405)
Q Consensus 58 ~~~l~~n~~~~~~~~~~~~i~yavKaN~------~~~vl~~l~~~G~-g~~v----aS~~E~~~a~~~G~~~~~Ii~~gp 126 (405)
.+.-.+.++++++.++. .+...+-+|. ...+++.|.+.++ .+|= ...+.+..+++. .+- .|...-.
T Consensus 204 ~~~d~~~v~avR~a~G~-~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~-~~i-pIa~dE~ 280 (421)
T 4hnl_A 204 METTLKMFAAIKEKYGN-QFQMLHDVHERLHPNQAIQFAKAAEPYQLFFLEDILPPDQSHWLTQLRSQ-SAT-PIATGEL 280 (421)
T ss_dssp HHHHHHHHHHHHHHHTT-SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHTT-CCC-CEEECTT
T ss_pred HHHHHHHHHHHHHHhCC-CceEeccccccCCHHHHHHHHHHhhhhhhcccccCCcccchHHHHHHHhc-CCC-CeecCcc
Confidence 34455667777877742 3345688887 4678888888887 7772 344555555544 222 3666555
Q ss_pred CCCHHHHHHHHHcC-CcEEEec-----CHHHHHHHHhHCCCC
Q 037610 127 CKPVSHIKYAASVG-VNLTTVD-----SVEELDKIRNWHPKS 162 (405)
Q Consensus 127 ~k~~~~l~~a~~~g-v~~i~vd-----s~~el~~i~~~~~~~ 162 (405)
..+..+++.+++.| +.++++| -+.|..++.+++...
T Consensus 281 ~~~~~~~~~~i~~~a~d~v~~d~~~~GGite~~~ia~~A~~~ 322 (421)
T 4hnl_A 281 FNNPMEWQELVKNRQIDFMRAHVSQIGGITPALKLAHFCDAM 322 (421)
T ss_dssp CCSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHT
T ss_pred eehhHHHHHHHhcCCceEEEeCCCCCCCHHHHHHHHHHHHHC
Confidence 66788999999876 4566666 688888888765433
No 251
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=21.26 E-value=1.8e+02 Score=25.08 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=9.0
Q ss_pred CCCCChhhHHHHHH
Q 037610 185 GAGHHPQEIMPLLK 198 (405)
Q Consensus 185 Gi~~~~~e~~~~~~ 198 (405)
|+ +.+.+.++++
T Consensus 164 GI--~~~n~~~~l~ 175 (214)
T 1wbh_A 164 GI--SPANYRDYLA 175 (214)
T ss_dssp SC--CTTTHHHHHT
T ss_pred CC--CHHHHHHHHh
Confidence 78 8888877764
No 252
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=21.18 E-value=3.7e+02 Score=23.00 Aligned_cols=30 Identities=10% Similarity=0.135 Sum_probs=24.5
Q ss_pred cEEEcCCCCCHHHHHHHHHcCCcEEEecCH
Q 037610 120 RIIYANPCKPVSHIKYAASVGVNLTTVDSV 149 (405)
Q Consensus 120 ~Ii~~gp~k~~~~l~~a~~~gv~~i~vds~ 149 (405)
.++..|...++++++.+++.|+..+++.+.
T Consensus 76 pv~v~ggi~~~~~~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 76 QVELSGGIRDDESLAAALATGCARVNVGTA 105 (244)
T ss_dssp EEEEESSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEECch
Confidence 377788888999999999999887777653
No 253
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=20.99 E-value=79 Score=29.58 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=22.8
Q ss_pred HHHHHHHHHHcC--CeEEEEEEecCCCCCCHHHHHHHHHH
Q 037610 193 IMPLLKAAEASG--LSVVGVSFHVGSEATNFAAFRGAIAA 230 (405)
Q Consensus 193 ~~~~~~~~~~~~--l~l~Gih~H~gs~~~~~~~~~~~i~~ 230 (405)
..++++.+++.+ +.-+|+++|++....+.+.+.+.+++
T Consensus 189 ~~~~v~~l~~~GvpidgiG~Q~H~~~~~p~~~~~~~~l~~ 228 (331)
T 3emz_A 189 IYNLVRSLLDQGAPVHGIGMQGHWNIHGPSMDEIRQAIER 228 (331)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCEEETTBSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCccceEEECceecCCCCCHHHHHHHHHH
Confidence 345566555544 77788889987654455544444443
No 254
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=20.94 E-value=1.5e+02 Score=26.09 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=36.1
Q ss_pred ChhhHHHHHHHHHHcCCeEEEEEEecCCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCC
Q 037610 189 HPQEIMPLLKAAEASGLSVVGVSFHVGSE-------------ATNFAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 189 ~~~e~~~~~~~~~~~~l~l~Gih~H~gs~-------------~~~~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
+.+++.++.+.+++.++.+..+++|+..+ ..+.+...+.++.+.+.++.+..+|.
T Consensus 49 ~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~ 116 (290)
T 3tva_A 49 TREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGC 116 (290)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66777788888888999999988764211 11333344566677777777766553
No 255
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=20.74 E-value=5.2e+02 Score=24.12 Aligned_cols=17 Identities=24% Similarity=0.626 Sum_probs=12.4
Q ss_pred hhHHHHHHHHHHcCCeE
Q 037610 191 QEIMPLLKAAEASGLSV 207 (405)
Q Consensus 191 ~e~~~~~~~~~~~~l~l 207 (405)
.++.++.+.++..++.+
T Consensus 282 t~~~~ia~~A~~~gi~~ 298 (381)
T 3fcp_A 282 NSVLALARVAQAAGIGL 298 (381)
T ss_dssp THHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHcCCce
Confidence 46677777777778775
No 256
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A*
Probab=20.64 E-value=94 Score=29.31 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=23.0
Q ss_pred HHHHHHHHHHcC--CeEEEEEEecCCCCCCHHHHHHHHHH
Q 037610 193 IMPLLKAAEASG--LSVVGVSFHVGSEATNFAAFRGAIAA 230 (405)
Q Consensus 193 ~~~~~~~~~~~~--l~l~Gih~H~gs~~~~~~~~~~~i~~ 230 (405)
..++++.+++.+ +.-+|++.|++....+.+.+.+.+++
T Consensus 204 ~~~~v~~l~~~G~~idgiG~Q~H~~~~~p~~~~~~~~l~~ 243 (356)
T 2uwf_A 204 LYNLVKDLLEQGVPIDGVGHQSHIQIGWPSIEDTRASFEK 243 (356)
T ss_dssp HHHHHHHHHHTTCCCCEEEECCEEESSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcccEEEEEEecCCCCCCHHHHHHHHHH
Confidence 445666665655 67888888986544455555444443
No 257
>3p3v_A PTS system, N-acetylgalactosamine-specific IIB CO; PTS IIB component, phosphotransferase, sugar transport, STRU genomics; HET: PGE; 1.65A {Streptococcus pyogenes serotype M1} SCOP: c.38.1.0
Probab=20.62 E-value=1.1e+02 Score=25.45 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=35.1
Q ss_pred HHHHHHHcCCeEEEcCHHHHHHHHhCCCCCCcEEEcCCCCCHHHHHHHHHcCCc
Q 037610 89 LLEALAALGSNFDCGSRSEIEAVLLLDVSPDRIIYANPCKPVSHIKYAASVGVN 142 (405)
Q Consensus 89 vl~~l~~~G~g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~k~~~~l~~a~~~gv~ 142 (405)
+++.....|+.+.+-|.+++....+.+.+..++++. +++++++.++++.|+.
T Consensus 49 ~lk~A~P~gvk~~i~sve~ai~~~~~~~~~~~v~il--~k~p~d~~~lv~~g~~ 100 (163)
T 3p3v_A 49 LMKTVIPSSIAIRFFSIQKVIDIIHKASPAQSIFIV--VKDLQDAKLLVEGGVP 100 (163)
T ss_dssp HHGGGSCTTSEEEEECHHHHHHHGGGCCTTCEEEEE--ESSHHHHHHHHHTTCC
T ss_pred HHHhhCCCCceEEEEEHHHHHHHHhccCCCceEEEE--ECCHHHHHHHHHcCCC
Confidence 344334457788888888887777765544555543 3567888888888864
No 258
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=20.54 E-value=1.4e+02 Score=27.38 Aligned_cols=122 Identities=14% Similarity=0.208 Sum_probs=68.6
Q ss_pred HHHHHHhCC--CCceeeeeccCCc-HHHHHHHHHcCC------e------------EEEcCHHHHH-HHHhCCCCCCcEE
Q 037610 65 YNHMISNLP--MIHPHYAVKCNPE-PALLEALAALGS------N------------FDCGSRSEIE-AVLLLDVSPDRII 122 (405)
Q Consensus 65 ~~~~~~~~~--~~~i~yavKaN~~-~~vl~~l~~~G~------g------------~~vaS~~E~~-~a~~~G~~~~~Ii 122 (405)
.+++.+... +++++-.=|+-|. ..+.+.....|- | ..+.|..++. .+++.+ +..+|.
T Consensus 124 t~~~v~~~~g~~~~i~dTRKT~PglR~l~kyAV~~GGg~nHR~gL~d~vlikdNHi~~~G~i~~Av~~ar~~~-~~~~Ie 202 (287)
T 3tqv_A 124 TNKLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTKAKKLD-SNKVVE 202 (287)
T ss_dssp HHHHHHHHTTSSCEEECCSCCCTTCHHHHHHHHHHTTCBCCCSSSSSSEEECTTTC----CHHHHHHHHHHHC-TTSCEE
T ss_pred HHHHHHHhCCCCeEEEeecccCcchHHHHHHHHHhcCchheeccCccEEEEeHHHHHHhCCHHHHHHHHHhhC-CCCcEE
Confidence 334444433 4677777788873 445555554431 1 1235677764 455553 333465
Q ss_pred EcCCCCCHHHHHHHHHcCCcEEEecCH--HHHHHHHhHCCCCeEEEEEecCCCCCCCCCCCCCCCCCCChhhHHHHHHHH
Q 037610 123 YANPCKPVSHIKYAASVGVNLTTVDSV--EELDKIRNWHPKSDLLIRIKSPDDSGAKYPLDSKYGAGHHPQEIMPLLKAA 200 (405)
Q Consensus 123 ~~gp~k~~~~l~~a~~~gv~~i~vds~--~el~~i~~~~~~~~v~lRi~~~~~~~~~~~~~srfGi~~~~~e~~~~~~~~ 200 (405)
.- +.+.+++++|++.|+..+-+|++ ++++++.+..+ .++.+=.. | |+ +.+.+.++.+
T Consensus 203 VE--v~tl~ea~eAl~aGaD~I~LDn~~~~~l~~av~~~~-~~v~ieaS-----G---------GI--t~~~i~~~a~-- 261 (287)
T 3tqv_A 203 VE--VTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIAR-GKVALEVS-----G---------NI--DRNSIVAIAK-- 261 (287)
T ss_dssp EE--ESSHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHT-TTCEEEEE-----S---------SC--CTTTHHHHHT--
T ss_pred EE--eCCHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHhhc-CCceEEEE-----C---------CC--CHHHHHHHHH--
Confidence 53 45789999999999988888865 56665544322 12333333 1 67 7777766543
Q ss_pred HHcCCeEEEE
Q 037610 201 EASGLSVVGV 210 (405)
Q Consensus 201 ~~~~l~l~Gi 210 (405)
.++.+.++
T Consensus 262 --tGVD~Isv 269 (287)
T 3tqv_A 262 --TGVDFISV 269 (287)
T ss_dssp --TTCSEEEC
T ss_pred --cCCCEEEE
Confidence 46666554
No 259
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=20.48 E-value=4.1e+02 Score=23.05 Aligned_cols=50 Identities=8% Similarity=-0.012 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHcCCeEEEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHhCCC
Q 037610 192 EIMPLLKAAEASGLSVVGVSFHVGSEA---TNFAAFRGAIAAAKAVFDTAARTSN 243 (405)
Q Consensus 192 e~~~~~~~~~~~~l~l~Gih~H~gs~~---~~~~~~~~~i~~~~~~~~~~~~~G~ 243 (405)
.+.+.++.++..+...+. +|.|... ...+.+.+.++.+.++.+.+++.|+
T Consensus 85 ~~~~~i~~A~~lG~~~v~--~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 137 (286)
T 3dx5_A 85 KCEQLAILANWFKTNKIR--TFAGQKGSADFSQQERQEYVNRIRMICELFAQHNM 137 (286)
T ss_dssp HHHHHHHHHHHHTCCEEE--ECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCEEE--EcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 445566666666766554 4666532 2345666677777778888877775
No 260
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=20.41 E-value=3.7e+02 Score=24.48 Aligned_cols=57 Identities=12% Similarity=0.026 Sum_probs=39.5
Q ss_pred HHHHHHHHHc-CC--eEEEcCHHHHHHHHhCCCCCCcEEEcCCC--CCHHHHHHHHHcCCcEEEe
Q 037610 87 PALLEALAAL-GS--NFDCGSRSEIEAVLLLDVSPDRIIYANPC--KPVSHIKYAASVGVNLTTV 146 (405)
Q Consensus 87 ~~vl~~l~~~-G~--g~~vaS~~E~~~a~~~G~~~~~Ii~~gp~--k~~~~l~~a~~~gv~~i~v 146 (405)
.++++.+.+. ++ .+|....+-++.++++|. .|+..-.. ..++-++.+.++|+.++..
T Consensus 104 vpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa---~iINdvsg~~~d~~m~~~aa~~g~~vVlm 165 (297)
T 1tx2_A 104 VPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGA---HIINDIWGAKAEPKIAEVAAHYDVPIILM 165 (297)
T ss_dssp HHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTC---CEEEETTTTSSCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCC---CEEEECCCCCCCHHHHHHHHHhCCcEEEE
Confidence 3445666654 64 899999999999999975 36653222 3566678888999874443
No 261
>1ble_A Fructose permease; phosphotransferase, sugar transport; 2.90A {Bacillus subtilis} SCOP: c.38.1.1
Probab=20.25 E-value=95 Score=25.80 Aligned_cols=53 Identities=15% Similarity=0.064 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCeEEEcCHHHHHHHHhCC-CCCCcEEEcCCCCCHHHHHHHHHcCCc
Q 037610 88 ALLEALAALGSNFDCGSRSEIEAVLLLD-VSPDRIIYANPCKPVSHIKYAASVGVN 142 (405)
Q Consensus 88 ~vl~~l~~~G~g~~vaS~~E~~~a~~~G-~~~~~Ii~~gp~k~~~~l~~a~~~gv~ 142 (405)
.+++.....|+.+.+-|.+++......+ .+..++++. +++++++..+++.|+.
T Consensus 46 ~~lk~a~P~gvk~~i~sve~ai~~~~~~~~~~~~v~ll--~k~p~d~~~lve~Gv~ 99 (163)
T 1ble_A 46 TLILSVAPSNVKASAVSVSKMAKAFHSPRYEGVTAMLL--FENPSDIVSLIEAGVP 99 (163)
T ss_dssp HHHHTSSCTTSEEEEECHHHHHHHHHCSTTTTCEEEEE--ESSSHHHHHHHTTTCC
T ss_pred HHHHhhCCCCCeEEEEEHHHHHHHHhcccCCCceEEEE--ECCHHHHHHHHHcCCC
Confidence 3344444457889999999998888876 455566554 3567788888888864
No 262
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=20.06 E-value=2e+02 Score=26.53 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=54.2
Q ss_pred CCCcEEEcCCC-CCHHHHHHHHHcCCcEEEecCHHH------HHHHHhHCCCCeEEEEEecCCCCCCC---CCCCCCCCC
Q 037610 117 SPDRIIYANPC-KPVSHIKYAASVGVNLTTVDSVEE------LDKIRNWHPKSDLLIRIKSPDDSGAK---YPLDSKYGA 186 (405)
Q Consensus 117 ~~~~Ii~~gp~-k~~~~l~~a~~~gv~~i~vds~~e------l~~i~~~~~~~~v~lRi~~~~~~~~~---~~~~srfGi 186 (405)
.+.+++..|.- .++++.+.+.+.|+.++..+.+.+ ++.+.+. ...+.|-+..+.-.-+. ..+....|+
T Consensus 172 ~~~~~~~iGiR~~~~~e~~~~~~~gi~~~~~~ei~~~g~~~v~~~i~~~--~~~vylSiDiDvLDpa~aPgtgtp~pgGl 249 (313)
T 3pzl_A 172 GEGRITSIGIRSVSREEFEDPDFRKVSFISSFDVKKNGIDKYIEEVDRK--SRRVYISVDMDGIDPAYAPAVGTPEPFGL 249 (313)
T ss_dssp CSSSEEEEEECBCCHHHHTSGGGGGSEEEEHHHHHHHCSHHHHHHHHHH--CSEEEEEEEGGGBCTTTCTTBSSCCSSCB
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHCCCEEEEHHHHhhhhHHHHHHHHhcc--CCeEEEEEeccccChhhCCCCCCCCCCCC
Confidence 45677776642 357888888888986555444432 1223222 24677776655411011 223367899
Q ss_pred CCChhhHHHHHHHHHHcCCeEEEEEEe
Q 037610 187 GHHPQEIMPLLKAAEASGLSVVGVSFH 213 (405)
Q Consensus 187 ~~~~~e~~~~~~~~~~~~l~l~Gih~H 213 (405)
+..|+.++++.+.. +++|+-.=
T Consensus 250 --t~~e~~~il~~l~~---~vvg~Div 271 (313)
T 3pzl_A 250 --ADTDVRRLIERLSY---KAVGFDIV 271 (313)
T ss_dssp --CHHHHHHHHHHHGG---GEEEEEEE
T ss_pred --CHHHHHHHHHHHhc---CeEEEEEE
Confidence 99999999987754 77776553
Done!