Query 037618
Match_columns 374
No_of_seqs 86 out of 88
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 03:52:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037618.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037618hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1btea_ g.7.1.3 (A:) Type II a 40.7 6.4 0.00047 30.5 2.2 21 154-176 33-53 (96)
2 d1ypra_ d.110.1.1 (A:) Profili 32.6 9.8 0.00071 29.4 2.1 63 179-257 20-84 (125)
3 d2h62d1 g.7.1.3 (D:8-98) Type 28.8 14 0.00099 28.4 2.3 22 153-176 31-52 (91)
4 d2i74a1 b.18.1.29 (A:472-651) 20.9 32 0.0024 28.9 3.4 38 154-191 103-156 (180)
5 d1fi4a1 d.14.1.5 (A:3-190) Mev 17.4 23 0.0017 29.6 1.6 14 151-164 156-169 (188)
6 d2azeb1 e.63.1.2 (B:201-301) T 13.4 20 0.0014 27.5 0.1 11 15-25 70-80 (101)
7 d2byoa1 b.125.1.3 (A:20-207) P 12.9 94 0.0068 25.2 4.3 76 169-256 64-143 (188)
8 d1jpca_ b.78.1.1 (A:) Lectin ( 11.7 1.2E+02 0.0085 22.0 4.2 37 154-190 35-75 (108)
9 d1v66a_ a.140.2.1 (A:) p53 bin 10.3 61 0.0044 23.5 1.9 17 59-75 13-29 (65)
10 d1qwta_ b.26.1.3 (A:) Interfer 9.7 98 0.0071 26.5 3.5 42 155-206 82-123 (239)
No 1
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.70 E-value=6.4 Score=30.49 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=17.2
Q ss_pred eccEEEEecCCCceEEEEEeeCe
Q 037618 154 TGGFVLWQKDPDLWFLELVVSGC 176 (374)
Q Consensus 154 ~GgFVlWQ~~Pd~W~~ELvV~G~ 176 (374)
.+||+||+..++. +++++-|+
T Consensus 33 ~~Cf~lW~~~~g~--~~i~~qGC 53 (96)
T d1btea_ 33 RHCFATWKNISGS--IEIVKQGC 53 (96)
T ss_dssp CEEEEEEEEETTE--EEEEEEEE
T ss_pred CceEEecccCCCC--EEEEEecC
Confidence 7899999999987 66666676
No 2
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.59 E-value=9.8 Score=29.37 Aligned_cols=63 Identities=17% Similarity=0.337 Sum_probs=38.0
Q ss_pred eeccCCceeeeccCCCCCCCCCCCCch--hhhhhccCCccchhhccccceeeeeeeecCcceeEEEeeCChhhhhhcCCC
Q 037618 179 ICGSNGKLTWRHSSNHQGPISKGPPRP--LRRFLQGLDPRSTANLFLDASCIGEKVINNEDCFILKLETSPAIREAQSGP 256 (374)
Q Consensus 179 ~AGsdGkvaWR~Tpw~g~HaakGp~RP--LRR~lQGLDPr~ta~lF~~A~ciGEk~i~gedCFiLkl~a~~~~l~arS~~ 256 (374)
+.|-||.-+|-.||-. ++-| ++..+..++..+ .++.+- =.++|+.|++|+-+ +..+.+|.+.
T Consensus 20 I~g~dg~svwA~S~gf-------~~~~~E~~~i~~~f~~~~--~~~~~G-----i~i~G~KY~~~~~d--~~~i~~kk~~ 83 (125)
T d1ypra_ 20 IYSRAGDAVWATSGGL-------SLQPNEIGEIVQGFDNPA--GLQSNG-----LHIQGQKFMLLRAD--DRSIYGRHDA 83 (125)
T ss_dssp EEETTSCCEEEEESCC-------CCCHHHHHHHHHHTTCTH--HHHHHC-----EEETTEEEEEEEEC--SSEEEEEETT
T ss_pred EEeCCCCeeEEECCCC-------CCCHHHHHHHHHHhcCcc--hhccCC-----EEEcCeEEEEEecC--CCeEEEEeCC
Confidence 6788999899999843 1333 455555543221 222221 25779999999854 4567776555
Q ss_pred C
Q 037618 257 N 257 (374)
Q Consensus 257 ~ 257 (374)
.
T Consensus 84 ~ 84 (125)
T d1ypra_ 84 E 84 (125)
T ss_dssp E
T ss_pred C
Confidence 3
No 3
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus musculus), isoform IIB [TaxId: 10090]}
Probab=28.83 E-value=14 Score=28.39 Aligned_cols=22 Identities=27% Similarity=0.687 Sum_probs=18.1
Q ss_pred eeccEEEEecCCCceEEEEEeeCe
Q 037618 153 ETGGFVLWQKDPDLWFLELVVSGC 176 (374)
Q Consensus 153 e~GgFVlWQ~~Pd~W~~ELvV~G~ 176 (374)
...||+||+..++- ++|+.-|+
T Consensus 31 ~~~Cy~lW~~~~~~--i~i~~qGC 52 (91)
T d2h62d1 31 RLHCYASWRNSSGT--IELVKKGC 52 (91)
T ss_dssp CEEEEEEEEEETTE--EEEEEEEE
T ss_pred CCccEEEeecCCCC--EEEEEecc
Confidence 36799999999877 77787887
No 4
>d2i74a1 b.18.1.29 (A:472-651) Peptide:N-glycanase, PNGase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.92 E-value=32 Score=28.88 Aligned_cols=38 Identities=21% Similarity=0.581 Sum_probs=25.8
Q ss_pred eccEEEEecCCCceEEEEEee----------C-eE--e---eeccCCceeeecc
Q 037618 154 TGGFVLWQKDPDLWFLELVVS----------G-CK--V---ICGSNGKLTWRHS 191 (374)
Q Consensus 154 ~GgFVlWQ~~Pd~W~~ELvV~----------G-~K--V---~AGsdGkvaWR~T 191 (374)
-+|=|.|+..-+.=|+++.-+ | .| + .+|.||.+||-|+
T Consensus 103 ~~G~v~~~~~~~~~~~~i~~d~~~~~~~~~~ga~~~~i~a~LsGG~g~~aWQHa 156 (180)
T d2i74a1 103 ESGSVRWKLRSETAQVNLLGDKNLRSYNDFSGATEVTLEAELSRGDGDVAWQHT 156 (180)
T ss_dssp TTCEEEEEEECSSCEEEECCBSCCEEECTTTTCSEEEEEEEEECCCGGGGGGSE
T ss_pred CCCEEEEEEEcCCceEEecCCCceeEecCcCCCeEEEEEEEEeCCCccccchhh
Confidence 567777877766667766532 2 11 2 4689999999886
No 5
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=17.38 E-value=23 Score=29.57 Aligned_cols=14 Identities=29% Similarity=0.714 Sum_probs=11.2
Q ss_pred CceeccEEEEecCC
Q 037618 151 NEETGGFVLWQKDP 164 (374)
Q Consensus 151 ~~e~GgFVlWQ~~P 164 (374)
.+-.||||+|++.+
T Consensus 156 RSi~Gg~v~W~~g~ 169 (188)
T d1fi4a1 156 RSLFGGYVAWEMGK 169 (188)
T ss_dssp GGGSSSEEEEECCS
T ss_pred hhhcCCeeEeccCC
Confidence 44689999999764
No 6
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.37 E-value=20 Score=27.47 Aligned_cols=11 Identities=36% Similarity=0.275 Sum_probs=9.5
Q ss_pred cccccccccch
Q 037618 15 ETVLEVPIPEE 25 (374)
Q Consensus 15 ~tvlEvPiPee 25 (374)
+|-||||+|++
T Consensus 70 gT~LeVPdp~~ 80 (101)
T d2azeb1 70 ETQLQAVDSSE 80 (101)
T ss_dssp TCEEEEEECSS
T ss_pred CCEEeecCCCc
Confidence 57899999985
No 7
>d2byoa1 b.125.1.3 (A:20-207) Putative lipoprotein LppX {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=12.89 E-value=94 Score=25.21 Aligned_cols=76 Identities=13% Similarity=0.128 Sum_probs=47.5
Q ss_pred EEEEeeCeEeeeccCCceeeeccCCCCCCCCCCCCchhhhhhccCCccc-hhhc---cccceeeeeeeecCcceeEEEee
Q 037618 169 LELVVSGCKVICGSNGKLTWRHSSNHQGPISKGPPRPLRRFLQGLDPRS-TANL---FLDASCIGEKVINNEDCFILKLE 244 (374)
Q Consensus 169 ~ELvV~G~KV~AGsdGkvaWR~Tpw~g~HaakGp~RPLRR~lQGLDPr~-ta~l---F~~A~ciGEk~i~gedCFiLkl~ 244 (374)
+|.++-|.++-+...++ |..-+ +.-.=-.-+=|||-. +++| +.++..+|++.|||..|.-+.-.
T Consensus 64 ~~~v~~d~~~Y~~~~~~--w~~~~----------~~~~~d~~~~ldP~~gl~~lLa~~~d~~~~G~EtvdG~~t~~~tgt 131 (188)
T d2byoa1 64 VPFRVQGDNISVKLFDD--WSNLG----------SISELSTSRVLDPAAGVTQLLSGVTNLQAQGTEVIDGISTTKITGT 131 (188)
T ss_dssp EEEEEETTEEEEEETTE--EEEEE----------EHHHHHHHTC-----CCCCCSTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEcCCCc--hhhcC----------ccccCCHhhhcChhHhHHHHhhhcCCceeccceEECCEEEEEEEEE
Confidence 88899998888887653 43211 110001112357665 3443 56778999999999999999999
Q ss_pred CChhhhhhcCCC
Q 037618 245 TSPAIREAQSGP 256 (374)
Q Consensus 245 a~~~~l~arS~~ 256 (374)
.+.+.+..=..+
T Consensus 132 v~~~~~~~~~~~ 143 (188)
T d2byoa1 132 IPASSVKMLDPG 143 (188)
T ss_dssp ECHHHHHHHCTT
T ss_pred eCHHHHHhhccc
Confidence 988887664443
No 8
>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}
Probab=11.69 E-value=1.2e+02 Score=21.97 Aligned_cols=37 Identities=19% Similarity=0.392 Sum_probs=27.7
Q ss_pred eccEEEEecCCCce----EEEEEeeCeEeeeccCCceeeec
Q 037618 154 TGGFVLWQKDPDLW----FLELVVSGCKVICGSNGKLTWRH 190 (374)
Q Consensus 154 ~GgFVlWQ~~Pd~W----~~ELvV~G~KV~AGsdGkvaWR~ 190 (374)
.++.++|+-+-+-. +++|--.|.-|.-..+|++.|.-
T Consensus 35 ~~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS 75 (108)
T d1jpca_ 35 DVDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWAS 75 (108)
T ss_dssp ETTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEEC
T ss_pred eCCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEc
Confidence 45677888654443 57777778899999999999973
No 9
>d1v66a_ a.140.2.1 (A:) p53 binding domain of protein inhibitor of activated STAT protein 1, PIAS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.30 E-value=61 Score=23.46 Aligned_cols=17 Identities=35% Similarity=0.475 Sum_probs=14.3
Q ss_pred ccChhhHHHHHHhhcCC
Q 037618 59 AGRINELRFLLYLVGSP 75 (374)
Q Consensus 59 ~~~~~dl~lLL~vvGaP 75 (374)
..+-+|||.|||-.|..
T Consensus 13 sfRVsELQ~LLg~~gr~ 29 (65)
T d1v66a_ 13 SLRVSELQVLLGYAGRN 29 (65)
T ss_dssp TCCHHHHHHHHHTTCCC
T ss_pred HHhHHHHHHHHHHcCCC
Confidence 35679999999999975
No 10
>d1qwta_ b.26.1.3 (A:) Interferon regulatory factor 3 (IRF3), transactivation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.75 E-value=98 Score=26.46 Aligned_cols=42 Identities=26% Similarity=0.532 Sum_probs=32.7
Q ss_pred ccEEEEecCCCceEEEEEeeCeEeeeccCCceeeeccCCCCCCCCCCCCchh
Q 037618 155 GGFVLWQKDPDLWFLELVVSGCKVICGSNGKLTWRHSSNHQGPISKGPPRPL 206 (374)
Q Consensus 155 GgFVlWQ~~Pd~W~~ELvV~G~KV~AGsdGkvaWR~Tpw~g~HaakGp~RPL 206 (374)
.|.+||...++.|-.-| |-+||-|...--++++...+|++.|
T Consensus 82 rGL~L~~~~~gIyA~Rl----------cq~kVfW~~~~~~~~~~~~~~p~kL 123 (239)
T d1qwta_ 82 GGLALWRAGQWLWAQRL----------GHCHTYWAVSEELLPNSGHGPDGEV 123 (239)
T ss_dssp TCEEEEEETTEEEEEEC----------SSSCEEEEEECSSCCCCTTCCSEEC
T ss_pred cceEEEEcCCcEEEEEe----------cCccEEEeCCcCCCCCCCCCCcccc
Confidence 57888888888887655 6779999887777778878888754
Done!